Carg12561 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12561
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	HSP20-like chaperones superfamily protein
Location	Carg_Chr14: 630226 .. 630840 (+)
RNA-Seq Expression	Carg12561
Synteny	Carg12561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACCCTCAGCAACTGTGATATGATGGATCTATCATCTGTTACCAGCAAGAGAAGGAAAAGCTCATCTCCTAAAATGAACGACGATGATTGCGCATTGGTGGTCAATCCTCCCGACTGGATTTCGAATATGGACAAGCACTCGAATGGCGTACAGTGGTTGAACGACTTCAGTGGAGTTATGAAGAACAGCCACGGGCCTGTTACAGCTGCAAAGGCAATATATGAAGACGGTGAAGGCTACTTAATAATTATCAGTTTGCCATTTGTGGATCTACAAAGGGTCAAAGTTTCGTGGAGGAACACGCTCACACATGGTATTATAAAGGTTTCTTGTGTGAGTACATCTCGAGTACCGTTCATCAAGAGGCACGATAGAACTTTCAAGCTTTTAGATTCGTCTACCGAACATTGTCCTCCAGGTGAATTCGTGAGAGAGATTCCTCTTTTGACTCGAATTCCTGAAGATGCTAACATTGAAGCGTACTACGACGGACCAGGATCTGTTCTTGAGATCATGGTCCCCAAACTCCAGGAAGGTTCAGAAGAACACGAGGTTCATGTTTGTCTTAGACCGCTGCATGGAGTGAAATCTAATATTAAGTTGAGATAG

mRNA sequence

ATGTCAACCCTCAGCAACTGTGATATGATGGATCTATCATCTGTTACCAGCAAGAGAAGGAAAAGCTCATCTCCTAAAATGAACGACGATGATTGCGCATTGGTGGTCAATCCTCCCGACTGGATTTCGAATATGGACAAGCACTCGAATGGCGTACAGTGGTTGAACGACTTCAGTGGAGTTATGAAGAACAGCCACGGGCCTGTTACAGCTGCAAAGGCAATATATGAAGACGGTGAAGGCTACTTAATAATTATCAGTTTGCCATTTGTGGATCTACAAAGGGTCAAAGTTTCGTGGAGGAACACGCTCACACATGGTATTATAAAGGTTTCTTGTGTGAGTACATCTCGAGTACCGTTCATCAAGAGGCACGATAGAACTTTCAAGCTTTTAGATTCGTCTACCGAACATTGTCCTCCAGGTGAATTCGTGAGAGAGATTCCTCTTTTGACTCGAATTCCTGAAGATGCTAACATTGAAGCGTACTACGACGGACCAGGATCTGTTCTTGAGATCATGGTCCCCAAACTCCAGGAAGGTTCAGAAGAACACGAGGTTCATGTTTGTCTTAGACCGCTGCATGGAGTGAAATCTAATATTAAGTTGAGATAG

Coding sequence (CDS)

ATGTCAACCCTCAGCAACTGTGATATGATGGATCTATCATCTGTTACCAGCAAGAGAAGGAAAAGCTCATCTCCTAAAATGAACGACGATGATTGCGCATTGGTGGTCAATCCTCCCGACTGGATTTCGAATATGGACAAGCACTCGAATGGCGTACAGTGGTTGAACGACTTCAGTGGAGTTATGAAGAACAGCCACGGGCCTGTTACAGCTGCAAAGGCAATATATGAAGACGGTGAAGGCTACTTAATAATTATCAGTTTGCCATTTGTGGATCTACAAAGGGTCAAAGTTTCGTGGAGGAACACGCTCACACATGGTATTATAAAGGTTTCTTGTGTGAGTACATCTCGAGTACCGTTCATCAAGAGGCACGATAGAACTTTCAAGCTTTTAGATTCGTCTACCGAACATTGTCCTCCAGGTGAATTCGTGAGAGAGATTCCTCTTTTGACTCGAATTCCTGAAGATGCTAACATTGAAGCGTACTACGACGGACCAGGATCTGTTCTTGAGATCATGGTCCCCAAACTCCAGGAAGGTTCAGAAGAACACGAGGTTCATGTTTGTCTTAGACCGCTGCATGGAGTGAAATCTAATATTAAGTTGAGATAG

Protein sequence

MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSGVMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVPFIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQEGSEEHEVHVCLRPLHGVKSNIKLR

Homology

[Close]

BLAST of Carg12561 vs. NCBI nr
Match: KAG7017308.1 (hypothetical protein SDJN02_19171, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422.5 bits (1085), Expect = 2.0e-114
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60
           MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG
Sbjct: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60

Query: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120
           VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP
Sbjct: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120

Query: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180
           FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE
Sbjct: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180

Query: 181 GSEEHEVHVCLRPLHGVKSNIKLR 205
           GSEEHEVHVCLRPLHGVKSNIKLR
Sbjct: 181 GSEEHEVHVCLRPLHGVKSNIKLR 204

[Close]

BLAST of Carg12561 vs. NCBI nr
Match: KAG6580553.1 (hypothetical protein SDJN03_20555, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 422.5 bits (1085), Expect = 2.0e-114
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60
           MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG
Sbjct: 299 MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 358

Query: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120
           VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP
Sbjct: 359 VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 418

Query: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180
           FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE
Sbjct: 419 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 478

Query: 181 GSEEHEVHVCLRPLHGVKSNIKLR 205
           GSEEHEVHVCLRPLHGVKSNIKLR
Sbjct: 479 GSEEHEVHVCLRPLHGVKSNIKLR 502

[Close]

BLAST of Carg12561 vs. NCBI nr
Match: XP_022934542.1 (uncharacterized protein LOC111441687 [Cucurbita moschata])

HSP 1 Score: 422.5 bits (1085), Expect = 2.0e-114
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60
           MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG
Sbjct: 299 MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 358

Query: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120
           VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP
Sbjct: 359 VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 418

Query: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180
           FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE
Sbjct: 419 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 478

Query: 181 GSEEHEVHVCLRPLHGVKSNIKLR 205
           GSEEHEVHVCLRPLHGVKSNIKLR
Sbjct: 479 GSEEHEVHVCLRPLHGVKSNIKLR 502

[Close]

BLAST of Carg12561 vs. NCBI nr
Match: XP_023527897.1 (uncharacterized protein LOC111790979 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 420.2 bits (1079), Expect = 9.9e-114
Identity = 202/204 (99.02%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60
           MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCAL+VNPPDWISNMDKHSNGVQWLNDFSG
Sbjct: 299 MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALMVNPPDWISNMDKHSNGVQWLNDFSG 358

Query: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120
           VMKNSHGPVTAAKAIYEDGEGYLII+SLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP
Sbjct: 359 VMKNSHGPVTAAKAIYEDGEGYLIIMSLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 418

Query: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180
           FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE
Sbjct: 419 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 478

Query: 181 GSEEHEVHVCLRPLHGVKSNIKLR 205
           GSEEHEVHVCLRPLHGVKSNIKLR
Sbjct: 479 GSEEHEVHVCLRPLHGVKSNIKLR 502

[Close]

BLAST of Carg12561 vs. NCBI nr
Match: XP_022983280.1 (uncharacterized protein LOC111481905 [Cucurbita maxima])

HSP 1 Score: 417.9 bits (1073), Expect = 4.9e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60
           MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCAL+VNPPDWISNMDKHSNG+QWLNDFSG
Sbjct: 299 MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALMVNPPDWISNMDKHSNGIQWLNDFSG 358

Query: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120
           VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP
Sbjct: 359 VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 418

Query: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180
           FIKR DRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE
Sbjct: 419 FIKRQDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 478

Query: 181 GSEEHEVHVCLRPLHGVKSNIKLR 205
           GSEEHEVHVCLRPLHGVKSNIKLR
Sbjct: 479 GSEEHEVHVCLRPLHGVKSNIKLR 502

[Close]

BLAST of Carg12561 vs. ExPASy TrEMBL
Match: A0A6J1F324 (uncharacterized protein LOC111441687 OS=Cucurbita moschata OX=3662 GN=LOC111441687 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 9.7e-115
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60
           MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG
Sbjct: 299 MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 358

Query: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120
           VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP
Sbjct: 359 VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 418

Query: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180
           FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE
Sbjct: 419 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 478

Query: 181 GSEEHEVHVCLRPLHGVKSNIKLR 205
           GSEEHEVHVCLRPLHGVKSNIKLR
Sbjct: 479 GSEEHEVHVCLRPLHGVKSNIKLR 502

[Close]

BLAST of Carg12561 vs. ExPASy TrEMBL
Match: A0A6J1J5F2 (uncharacterized protein LOC111481905 OS=Cucurbita maxima OX=3661 GN=LOC111481905 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.4e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60
           MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCAL+VNPPDWISNMDKHSNG+QWLNDFSG
Sbjct: 299 MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALMVNPPDWISNMDKHSNGIQWLNDFSG 358

Query: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120
           VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP
Sbjct: 359 VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 418

Query: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180
           FIKR DRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE
Sbjct: 419 FIKRQDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 478

Query: 181 GSEEHEVHVCLRPLHGVKSNIKLR 205
           GSEEHEVHVCLRPLHGVKSNIKLR
Sbjct: 479 GSEEHEVHVCLRPLHGVKSNIKLR 502

[Close]

BLAST of Carg12561 vs. ExPASy TrEMBL
Match: A0A0A0LFL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734340 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.1e-105
Identity = 185/204 (90.69%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60
           +S  +NCDMMDLS VTSK+RKSSSP MNDDDC L+VNPPDWIS+MDKHSNG+QWLNDFSG
Sbjct: 295 LSNHNNCDMMDLSPVTSKKRKSSSPNMNDDDCLLMVNPPDWISDMDKHSNGLQWLNDFSG 354

Query: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120
           VMKNS+GPVTAAK IYEDGE YLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTS VP
Sbjct: 355 VMKNSYGPVTAAKTIYEDGESYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSCVP 414

Query: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180
           F+KRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKL+E
Sbjct: 415 FVKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLRE 474

Query: 181 GSEEHEVHVCLRPLHGVKSNIKLR 205
           GSEEHEVHVCLRPLHGVKSN+ LR
Sbjct: 475 GSEEHEVHVCLRPLHGVKSNVMLR 498

[Close]

BLAST of Carg12561 vs. ExPASy TrEMBL
Match: A0A6J1CX94 (uncharacterized protein LOC111015033 OS=Momordica charantia OX=3673 GN=LOC111015033 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104
Identity = 185/204 (90.69%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MSTLSNCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSG 60
           MS  SNCD+MDLS V SKRRKSSSP+MNDDDC L VNPPDWIS+MDK SN +QWLNDFSG
Sbjct: 299 MSNHSNCDLMDLSPVISKRRKSSSPQMNDDDCVLTVNPPDWISDMDKQSNSLQWLNDFSG 358

Query: 61  VMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVP 120
           VMKN HGPVTAAK IYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSR+P
Sbjct: 359 VMKNIHGPVTAAKTIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRIP 418

Query: 121 FIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQE 180
           FIKRHDRTFKL DSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKL+E
Sbjct: 419 FIKRHDRTFKLFDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLRE 478

Query: 181 GSEEHEVHVCLRPLHGVKSNIKLR 205
           GSEEHEVHVCLRPL GVKSN+KLR
Sbjct: 479 GSEEHEVHVCLRPLLGVKSNVKLR 502

[Close]

BLAST of Carg12561 vs. ExPASy TrEMBL
Match: A0A5A7TR75 (HSP20-like chaperones superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001770 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.5e-104
Identity = 183/199 (91.96%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 6   NCDMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWISNMDKHSNGVQWLNDFSGVMKNS 65
           NCDMMDLS VTSK+RKSSSP MNDDDC L+VNPPDWIS+MDKHSNG+QWLNDFSGVMKNS
Sbjct: 299 NCDMMDLSPVTSKKRKSSSPNMNDDDCVLMVNPPDWISDMDKHSNGLQWLNDFSGVMKNS 358

Query: 66  HGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVPFIKRH 125
           +GPVTAAK+IYEDGE YLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTS VPFIKRH
Sbjct: 359 YGPVTAAKSIYEDGESYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSCVPFIKRH 418

Query: 126 DRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQEGSEEH 185
           DRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKL+EGSEEH
Sbjct: 419 DRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLREGSEEH 478

Query: 186 EVHVCLRPLHGVKSNIKLR 205
           EVHVCLRPLHGV S++ LR
Sbjct: 479 EVHVCLRPLHGVTSSVMLR 497

[Close]

BLAST of Carg12561 vs. TAIR 10
Match: AT2G37570.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-72
Identity = 136/194 (70.10%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 2   STLSNCDMMDLSSVTSKRRKS-SSPKMNDDDCALVVNPPDWISNMDKHSNGV-QWLNDFS 61
           S  SN +  DLS  + K+RK   S  +++++C L VNP   +  ++ H N +  W N+F+
Sbjct: 150 SNHSNGEATDLSPSSHKKRKDLFSNGIHEEECCLTVNPQPPV--IEAHQNELPTWSNEFT 209

Query: 62  GVMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRV 121
           G MKN +GPVTAAK IYED EGYLIIISLPFVDL  VKVSWRNTLTHGIIKVSC+STSRV
Sbjct: 210 GAMKNVYGPVTAAKTIYEDEEGYLIIISLPFVDLNSVKVSWRNTLTHGIIKVSCLSTSRV 269

Query: 122 PFIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQ 181
           PFIKRHDRTFKL DS++EHCPPGEFVREIPL  RIPEDANIEAYYDGPGSVLEI+VPKL+
Sbjct: 270 PFIKRHDRTFKLTDSASEHCPPGEFVREIPLSNRIPEDANIEAYYDGPGSVLEILVPKLR 329

Query: 182 EGSEEHEVHVCLRP 194
            G EEHEV VCLRP
Sbjct: 330 AGPEEHEVRVCLRP 341

[Close]

BLAST of Carg12561 vs. TAIR 10
Match: AT2G37570.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-72
Identity = 136/194 (70.10%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 2   STLSNCDMMDLSSVTSKRRKS-SSPKMNDDDCALVVNPPDWISNMDKHSNGV-QWLNDFS 61
           S  SN +  DLS  + K+RK   S  +++++C L VNP   +  ++ H N +  W N+F+
Sbjct: 293 SNHSNGEATDLSPSSHKKRKDLFSNGIHEEECCLTVNPQPPV--IEAHQNELPTWSNEFT 352

Query: 62  GVMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRV 121
           G MKN +GPVTAAK IYED EGYLIIISLPFVDL  VKVSWRNTLTHGIIKVSC+STSRV
Sbjct: 353 GAMKNVYGPVTAAKTIYEDEEGYLIIISLPFVDLNSVKVSWRNTLTHGIIKVSCLSTSRV 412

Query: 122 PFIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQ 181
           PFIKRHDRTFKL DS++EHCPPGEFVREIPL  RIPEDANIEAYYDGPGSVLEI+VPKL+
Sbjct: 413 PFIKRHDRTFKLTDSASEHCPPGEFVREIPLSNRIPEDANIEAYYDGPGSVLEILVPKLR 472

Query: 182 EGSEEHEVHVCLRP 194
            G EEHEV VCLRP
Sbjct: 473 AGPEEHEVRVCLRP 484

[Close]

BLAST of Carg12561 vs. TAIR 10
Match: AT5G02480.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 224.6 bits (571), Expect = 7.4e-59
Identity = 116/199 (58.29%), Postives = 144/199 (72.36%), Query Frame = 0


Query: 5   SNCDMMDLSS----VTSKRRKS-SSPKMNDDDCALVVNPPDWISNMDKH--SNGVQWLND 64
           SN D  D S     + +K+RK   SP  ++++C L VN      N++ H   +   W+ND
Sbjct: 314 SNGDSSDQSPGGGVINNKKRKEFLSPGSSEEECCLTVN------NIETHHAKDPPSWVND 373

Query: 65  FSGVMKNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTS 124
           F+GVMKNS GPVTAAK +YED E YL++I+LPFVDL  VKVSWRN +T+GI+KV+ +STS
Sbjct: 374 FTGVMKNSCGPVTAAKTVYEDEEAYLVVITLPFVDLNTVKVSWRNNITNGIVKVTGLSTS 433

Query: 125 RVPFIKRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPK 184
           R  F+KR DRTFKL+D   EHCPPGEF+REI L  RIPE+ANIEAY+DG G VLEI+VPK
Sbjct: 434 RASFVKRRDRTFKLVDQMAEHCPPGEFMREIQLPNRIPEEANIEAYFDGTGPVLEIVVPK 493

Query: 185 LQEG-SEEHEVHVCLRPLH 196
           L+ G  EEHEV VCLR  H
Sbjct: 494 LRGGVEEEHEVRVCLRSHH 506

[Close]

BLAST of Carg12561 vs. TAIR 10
Match: AT3G12570.1 (FYD )

HSP 1 Score: 219.5 bits (558), Expect = 2.4e-57
Identity = 109/191 (57.07%), Postives = 133/191 (69.63%), Query Frame = 0


Query: 8   DMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWIS-----NMDKHSNGVQWLNDFSGVM 67
           D +++    S +RK         DC  + N  D  S     +M  H+  + W NDFSGVM
Sbjct: 303 DTVEVQLAGSNKRKR--------DCLALGNCDDSSSSEKSLDMKIHATELPWSNDFSGVM 362

Query: 68  KNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVPFI 127
           KN +GPVTAAK IYED  G+LI++SLPFVD  RVKV+WRNT  HGI+K+SCVST+  PFI
Sbjct: 363 KNVYGPVTAAKTIYEDDRGFLIVMSLPFVDSGRVKVTWRNTPAHGIVKISCVSTACEPFI 422

Query: 128 KRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQEGS 187
           KRHDRTFKL D + EHCPPGEFVRE+ L  RIP+DA +EAY D  G+ LE++VPK + G 
Sbjct: 423 KRHDRTFKLTDPTPEHCPPGEFVREVSLPNRIPDDAKLEAYRDETGTTLEVLVPKHRMGP 482

Query: 188 EEHEVHVCLRP 194
           EEHEV VCLRP
Sbjct: 483 EEHEVRVCLRP 485

[Close]

BLAST of Carg12561 vs. TAIR 10
Match: AT3G12570.3 (FYD )

HSP 1 Score: 219.5 bits (558), Expect = 2.4e-57
Identity = 109/191 (57.07%), Postives = 133/191 (69.63%), Query Frame = 0


Query: 8   DMMDLSSVTSKRRKSSSPKMNDDDCALVVNPPDWIS-----NMDKHSNGVQWLNDFSGVM 67
           D +++    S +RK         DC  + N  D  S     +M  H+  + W NDFSGVM
Sbjct: 303 DTVEVQLAGSNKRKR--------DCLALGNCDDSSSSEKSLDMKIHATELPWSNDFSGVM 362

Query: 68  KNSHGPVTAAKAIYEDGEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRVPFI 127
           KN +GPVTAAK IYED  G+LI++SLPFVD  RVKV+WRNT  HGI+K+SCVST+  PFI
Sbjct: 363 KNVYGPVTAAKTIYEDDRGFLIVMSLPFVDSGRVKVTWRNTPAHGIVKISCVSTACEPFI 422

Query: 128 KRHDRTFKLLDSSTEHCPPGEFVREIPLLTRIPEDANIEAYYDGPGSVLEIMVPKLQEGS 187
           KRHDRTFKL D + EHCPPGEFVRE+ L  RIP+DA +EAY D  G+ LE++VPK + G 
Sbjct: 423 KRHDRTFKLTDPTPEHCPPGEFVREVSLPNRIPDDAKLEAYRDETGTTLEVLVPKHRMGP 482

Query: 188 EEHEVHVCLRP 194
           EEHEV VCLRP
Sbjct: 483 EEHEVRVCLRP 485

The following BLAST results are available for this feature:

BLAST of Carg12561 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017308.1	2.0e-114	100.00	hypothetical protein SDJN02_19171, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6580553.1	2.0e-114	100.00	hypothetical protein SDJN03_20555, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022934542.1	2.0e-114	100.00	uncharacterized protein LOC111441687 [Cucurbita moschata]	[more]
XP_023527897.1	9.9e-114	99.02	uncharacterized protein LOC111790979 [Cucurbita pepo subsp. pepo]	[more]
XP_022983280.1	4.9e-113	98.53	uncharacterized protein LOC111481905 [Cucurbita maxima]	[more]

BLAST of Carg12561 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F324	9.7e-115	100.00	uncharacterized protein LOC111441687 OS=Cucurbita moschata OX=3662 GN=LOC1114416...	[more]
A0A6J1J5F2	2.4e-113	98.53	uncharacterized protein LOC111481905 OS=Cucurbita maxima OX=3661 GN=LOC111481905...	[more]
A0A0A0LFL1	4.1e-105	90.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734340 PE=4 SV=1	[more]
A0A6J1CX94	3.5e-104	90.69	uncharacterized protein LOC111015033 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A5A7TR75	4.5e-104	91.96	HSP20-like chaperones superfamily protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Carg12561 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37570.2	1.2e-72	70.10	HSP20-like chaperones superfamily protein	[more]
AT2G37570.1	1.2e-72	70.10	HSP20-like chaperones superfamily protein	[more]
AT5G02480.1	7.4e-59	58.29	HSP20-like chaperones superfamily protein	[more]
AT3G12570.1	2.4e-57	57.07	FYD	[more]
AT3G12570.3	2.4e-57	57.07	FYD	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 38..189 e-value: 6.0E-7 score: 31.3
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 69..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR33981:SF17	HSP20-LIKE CHAPERONE SUPERFAMILY PROTEIN	coord: 2..203
None	No IPR available	PANTHER	PTHR33981	EXPRESSED PROTEIN	coord: 2..203
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 75..177 e-value: 8.19295E-7 score: 43.6969

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12561-RA	Carg12561-RA	mRNA