Carg17527 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17527
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	novel plant SNARE 13
Location	Carg_Chr12: 10163984 .. 10168901 (-)
RNA-Seq Expression	Carg17527
Synteny	Carg17527

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATTGTGAAATTCGTGACACTTTTCGAGCACTTTCGTATGTTTTTTTCACCTTACTGTTTTTATTTTGTTGTTATCGCTTCTTTGTGCTTGTGCTTTCCGTTTTTCTATTTATAGCTCATTTTTCTCTTTGTTAAACTCATAACCAATTCCTAGTAGATTGTCCTATTCAACTCAATTGTTTTTGGTTTGGAGGCTTTCGAAGTCTTTGGTTGGGTGATACTATTTATGCGCCTTGTGTCCCCTCCTCGATCTTTTTCCACCTCGTACTTCTCTGCGTTCTTGATCTTATTACTACTGACTCCAGAATTCTGGGAACTTAACATCAGTAAGCCTCCTTTGGGGATTAGACAACTTAGGGCTCATTTGAAAATGTTTTTATTTTTAATATTATGATAATTTACTGAACGTACTTCTTTTTTTGTTAATTTAATAAGAAAAATGTATCTGTTTTATTTTTGAGATTTGAATGATTTCTAAACCTCTTTATAAAAACTGAAAATTTAAACCCAGAAATGTAGGTGAACTTAAATTTTTAACAACTCAAAACTTTAAGCAGATTAAATACTGTGAATCCTTGGGGATAGGTTTATCTGCTAAATTTACCTATTAAACTGGAATTCACTAGCACTAGAAAACCTTGTAGCGTACAAGTCTTAACATATCCCTACTTAAGCAGTGAAGTTGGTCCTAAATTTGGAGGTTTTGTACCGGTAATGTTGCAATATCACTTGAAGTTGATACCATTTATTCAATATCTGCATTATGATGTTTATTCTATACATCAGCATTATGATATCTTCTTTGATTTCTACTTACTATCAGAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGGTATGGAAAAGCCAGCACATAGCTCTTTGAGCATGTGGGAGCTTCTCTTGTTGCTTTATGAAAAAACTACAGTTTGTGTCATGCATCCTCAGTCTCTTCATTAAATACTGGAACAGTAAATTCATTTAGATGTTGGCCAAACTAAACACATAAATTGAGAAAAACTAATGTTCAATCAACATGCTTCCTATTTTGTTAATGTTCTTTGTGAATCTTTATTACAGCTCATTACAAAATGGAGCTATTCTTGCAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGGTTAGTTCATTGTTATTTTATCTTTCAAACTTAGGACATGAATGCATCTAGTGAAGGAAGTACTTGTATAAATTTTGATGGTTAGCAGATTAAGCGAATTAGTTTACATTGGTTTTGATTGAGGTTGCAAAACTTAGGACATGAGGTTGCCAAATCATAAGCTAGCAGATTTGCTGTTCTGCTGTGGTGAGACGTAAGGCAAGATAATTTGGTGGATTGCTGTCTGCATTTTTTTAGGAAATTAGGGAACGTTGGTGTAGGATTATTAGAGAAGCTTTGACAGATGCCTCTATCCGCCTCAAATGCCATTTTTTTTCCACGAGTACTGTTTACCACATTGCTTGCAGTTCAATTTTATAATTGAATAATTCAAATAATTTATCATTCAAAATAGTTATTTGTATGGAGGCATCACACATTGTCTATTATTTTCTTGTCAACAACCTTGGTCAAAATTTTAGAAAACATTTTAAGTTTTTACTTTCATGCTGGATTGAGTGCTGACTTTGAACTTGAAGCAGAAAAGTAGTTTTTTTATATTTGTATTTTTTTAATTTAGAATGTGAGATAACTCTGAGTATCATCATTTCTAACTGCTCTAGGTTTCCTTATGTTCAATTTCAAGAGCATTGAGAGGATTGAAAATTGTTGGGATATATATATATGGACAGAATAGTATACGTTTTTTCTTTTTCTTTTTTTTTTTAATAAAAAAAAAAAAGAAACTGGGAAATATATGCATTGGCTTATAGATTTAAGATGCCTTGTCATTATCTCATAATTGCCTTGAACGAAGATGTTGGAAAACTATTTGATTGTTGAGAATTTTGTGGTCATGTTGCTTGTTGACGAAAGTGTACTTTTAAAATGTGTCTTTTCTCATGGGACTTCCGAACCAGCTTTTCCTTGGAATTGATCATTTTTTCTATGCCAGTGAGTTACATGTATCACTTATTGATACTGTAAGATGGAACTTTTCCAGCCATCTTTATTATTGCTCTAAATATTTCTTTGGAGATTAGTGTTTACAGTGGTTTTGAATTTAATTGATCTTGTGCTTATTACATTATTTTCATTTTCAGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTAAGTTCTCCCGTTTTCTTATCGGAATGTGGCACTACCTAAGTATATAATTTAGGAGCAAATGATGATTTATTGGGGGGGGGGAGTAATTCTTGCCTGAGAATGGAAGTAATGGGTAAGAAACAAATTTTCCCTCTTGGGAAAATATTTCTGTTTCAATTTCTAGGATGTGGGTGCAGAATATATCCACTACCTTGATTCCAACTCTTCCTAATTTTGTACATATTGGATAGTCACTGGAAGTTTGGTTTTCCAATTGAAAAATGGTAGTACCTTTTGATTCATATATTAGTGAATGCTTCAATATATATATATATATCTTTTCTTTACAAATCTAAGCATGAGAAATCAATTTTTTTAATCTCTTATTTATGTTCTAGTATCTTGTTTTTCTATGGGAATGATGTGTCATAAATTATTGATTCTATTTTGATAGCGGAAGTAGCTGTCAGATGACAAAATAAAAGCAAATGAAGAGGGGTGGGTGTCAGATCCTAGTTGCTTGTTATACTTGCCTTTGTAATTGATTTCCCCTTGTAATTTACTTATTGGAGGTGTTCTTGTTTTTCTCCAAAAGGGGAGTGCCGAATCATAACATTGGTCAAACCTGTTCACTGTATTAATGACAAGTGTTGCCTATTAGAAAAAGAATAAAGGTATAACAATCGAGTCAGTTAGATTTTGATCTCATGCTAATGGTGTGAAGTCACTTCTTTTATTATTATTTTTTTTCACAATGAAACATATGGTTTCTCATATTTAAAAAATATTGCCCAGCCACTGGAATCATTAGTTCCCTTTTTTCAAATGACTGAACGTGGTTCACATAATTCAGCATATTCAATGGTTTGCTCTCAGTATATTGGAATCAAATTGGTGTGAGTTTCTAATGTTTTATTGCTCAATGAATTACAGGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATGTAAGCTATATTTTCCGTATCTGTAGGCATTCATAGAAAAATTCCCTGGTTGCCTATAGGGGAGGGACTGCTGATATCTACTCCAAAGGGAAGAAATTCCTCTAGGACTTTCCTGTTAAAGAAACAACTGTTGAATTAAGCTTATAATTTAAGAATGTTTTTAAAGCAAGGTTCTTATCATTTTTTAAAATGTTTTTTTTATGCGAGGCTAACGCTCATGTGGTGATGAATGAGGTTATGAAAATCTGCCTCACCCGGCAGCAAGCTTCTTATTTTATGTGCTTGGAATTCTACACAGTATCTATTTTTCTCATTCGATTGGCATGCCTTTGTGCTGTAGCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGAAGAACTATCTGAAACGTGTGATTTTATCATTTGTATCCCCTTTGTTCTAATGCTTAGCTTTGACCCGTAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAGTATGTTCAACGTTGAAATTATACCTTATGGTTAAAAGTATATTCTGAGTCTAGCCTGATTAGTAGAATTTCCTGGGTATTCTTTTAACTTTTCCTCATTAAATTTCCAGACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTAATTTTGGTTTTGTGTCTGGGACACCCCTCCCCCCCACAAATAAAAAGAAAGAAAAACGTGATTTTGGTTTTCTTAGTGGGACTAACCCCTCTCTTCCCCCTTTGGAAAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTGATAGCCATTATCGTAGTGAAGGTAAATTCTGCTGTTTATTTTGTTATACCTTGAAAGAACAGTTCCAGATGATGGATAATATTTGGTGTGTTTTGTAATAACAAGTTTGATATGTGTAACTTTTCAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAAATTCTTATTCTAGGAAGATGTATGCCTTCTTTGTTTGTGTTATATCTATTTCGAGTGAATTATTGCTTAAAGAAGGCATCGAGACATGACACTGTGAGAATTCATCTGCTCTACTTGTATGCAATTCAATCTATTCTTGGCTGAGATGTGCATATTGCTTGGTTGTGATTTTGGTTTCATTTCAAGACACTGGTCCTGTAAATGTTTTACTTTATGAGGTGATTCATGTCTTGCGGAATTCACCCTCCTAACATTCTTATGTACACTTCACAATTAATTACACTCCCACTGCCCACTGCTTCTTCTTTTGGTCCTGTAAATGTTTTACTTT

mRNA sequence

ATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATTGTGAAATTCGTGACACTTTTCGAGCACTTTCAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTGATAGCCATTATCGTAGTGAAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAAATTCTTATTCTAGGAAGATGTATGCCTTCTTTGTTTGTGTTATATCTATTTCGAGTGAATTATTGCTTAAAGAAGGCATCGAGACATGACACTGTGAGAATTCATCTGCTCTACTTGTATGCAATTCAATCTATTCTTGGCTGAGATGTGCATATTGCTTGGTTGTGATTTTGGTTTCATTTCAAGACACTGGTCCTGTAAATGTTTTACTTTATGAGGTGATTCATGTCTTGCGGAATTCACCCTCCTAACATTCTTATGTACACTTCACAATTAATTACACTCCCACTGCCCACTGCTTCTTCTTTTGGTCCTGTAAATGTTTTACTTT

Coding sequence (CDS)

ATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATTGTGAAATTCGTGACACTTTTCGAGCACTTTCAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTGATAGCCATTATCGTAGTGAAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAA

Protein sequence

MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIKDFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIRDIPGLAPPAPARRLLYLRTPEHFE

Homology

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BLAST of Carg17527 vs. NCBI nr
Match: KAG7021089.1 (putative plant SNARE 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 509.6 bits (1311), Expect = 1.6e-140
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE
Sbjct: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 269
           KDIRDIPGLAPPAPARRLLYLRTPEHFE
Sbjct: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 268

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BLAST of Carg17527 vs. NCBI nr
Match: KAG6594039.1 (putative plant SNARE 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139
Identity = 267/268 (99.63%), Postives = 267/268 (99.63%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           EPTADDNV MASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE
Sbjct: 121 EPTADDNVLMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 269
           KDIRDIPGLAPPAPARRLLYLRTPEHFE
Sbjct: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 268

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BLAST of Carg17527 vs. NCBI nr
Match: XP_023513592.1 (novel plant SNARE 13-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 503.8 bits (1296), Expect = 9.0e-139
Identity = 266/268 (99.25%), Postives = 267/268 (99.63%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MASALQMTPQLEQIH EIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           +PTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE
Sbjct: 121 QPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 269
           KDIRDIPGLAPPAPARRLLYLRTPEHFE
Sbjct: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 268

[Close]

BLAST of Carg17527 vs. NCBI nr
Match: XP_022930215.1 (novel plant SNARE 13-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 503.8 bits (1296), Expect = 9.0e-139
Identity = 266/268 (99.25%), Postives = 267/268 (99.63%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MASALQMTPQLEQIH EIRDT+RALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDTYRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE
Sbjct: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 269
           KDIRDIPGLAPPAPARRLLYLRTPEHFE
Sbjct: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 268

[Close]

BLAST of Carg17527 vs. NCBI nr
Match: XP_023000437.1 (novel plant SNARE 13-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 500.4 bits (1287), Expect = 9.9e-138
Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MASALQMT QLEQIH EIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTTQLEQIHGEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           EPTADDNVRMASSMTNQELIDAGKKTMDETD+AIERTQKVVEQTIEVGTQTAVTLKGQTE
Sbjct: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDKAIERTQKVVEQTIEVGTQTAVTLKGQTE 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 269
           KDIRDIPGLAPPAPARRLLYLRTPEHFE
Sbjct: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 268

[Close]

BLAST of Carg17527 vs. ExPASy Swiss-Prot
Match: Q9LRP1 (Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 4.7e-114
Identity = 217/268 (80.97%), Postives = 248/268 (92.54%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MAS L M+PQLEQIH EIRD FRAL+NGFQ+LDKIKDS RQSKQLEELT KMRECKRL+K
Sbjct: 1   MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDRE+KDEE ++SPEV+KQLNDEKQSMIKELNS+VALRKTYM++LGNK+VELFD G GV
Sbjct: 61  EFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGV 120

Query: 121 S-EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQ 180
           S EPTA++NV++ASSM+NQEL+DAG K MDETDQAIER+++VVEQT+EVGTQTA  LKGQ
Sbjct: 121 SGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQ 180

Query: 181 TEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNP 240
           T+QMGR+VN LDTI FSIKKASQLVKEIGRQVATDKCIM FLFLIVCGV+AII+VKIVNP
Sbjct: 181 TDQMGRVVNHLDTIQFSIKKASQLVKEIGRQVATDKCIMGFLFLIVCGVVAIIIVKIVNP 240

Query: 241 NNKDIRDIPGLAPPAPARRLLYLRTPEH 267
           NNKDIRDIPGLAPPA +R+LLYLR  ++
Sbjct: 241 NNKDIRDIPGLAPPAQSRKLLYLRNQDY 268

[Close]

BLAST of Carg17527 vs. ExPASy Swiss-Prot
Match: Q9LNH6 (Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 8.2e-111
Identity = 210/264 (79.55%), Postives = 243/264 (92.05%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MAS L M+P LEQIH EIRD FRAL+NGFQ+LDKIKDS+RQSKQLEEL  KMR+CKRL+K
Sbjct: 1   MASELPMSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDRE+KD E ++SP+V+KQLNDEKQSMIKELNS+VALRKTY+N+LGNK+VELFD G GV
Sbjct: 61  EFDRELKDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTLGNKKVELFDTGAGV 120

Query: 121 S-EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQ 180
           S EPTA++NV+MAS+M+NQEL+DAG K MDETDQAIER+++VV QT+EVGTQTA  LKGQ
Sbjct: 121 SGEPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQ 180

Query: 181 TEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNP 240
           T+QMGR+VN+LDTI FS+KKASQLVKEIGRQVATDKCIM FLFLIVCGVIAII+VKIVNP
Sbjct: 181 TDQMGRVVNDLDTIQFSLKKASQLVKEIGRQVATDKCIMAFLFLIVCGVIAIIIVKIVNP 240

Query: 241 NNKDIRDIPGLAPPAPARRLLYLR 263
           NNKDIRDIPGLAPPA +R+LLY R
Sbjct: 241 NNKDIRDIPGLAPPAQSRKLLYFR 264

[Close]

BLAST of Carg17527 vs. ExPASy Swiss-Prot
Match: Q944A9 (Novel plant SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=NPSN11 PE=1 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 5.9e-85
Identity = 172/258 (66.67%), Postives = 211/258 (81.78%), Query Frame = 0


Query: 7   MTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIKDFDREI 66
           ++ +L +I  +I D FRALSNGFQKL+KIKD+NRQS+QLEELT KMR+CK LIKDFDREI
Sbjct: 7   VSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKDFDREI 66

Query: 67  KDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSL--GNKRVELFDEGGVSEPTA 126
           K  E+ +    ++ LND +QSM+KELNS+VAL+K Y ++L   NKRV+LFD  G  E   
Sbjct: 67  KSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFD--GPGEEHM 126

Query: 127 DDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTEQMGR 186
           ++NV +AS+M+NQEL+D G   MD+TDQAIER +K+V++TI VGT T+  LK QTEQM R
Sbjct: 127 EENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTEQMSR 186

Query: 187 IVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIR 246
           +VNELD+I+FS+KKAS+LVKEIGRQVATDKCIM FLFLIV GVIAII+VKIVNPNNKDIR
Sbjct: 187 VVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNKDIR 246

Query: 247 DIP--GLAPPAPARRLLY 261
           DIP  GLAPPA  RRLL+
Sbjct: 247 DIPGVGLAPPAMNRRLLW 262

[Close]

BLAST of Carg17527 vs. ExPASy Swiss-Prot
Match: Q2KIU0 (Vesicle transport through interaction with t-SNAREs homolog 1B OS=Bos taurus OX=9913 GN=VTI1B PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.7e-04
Identity = 50/227 (22.03%), Postives = 109/227 (48.02%), Query Frame = 0


Query: 21  TFRALSNGFQKLDKI-----KDSNRQSKQLEELTGKMRECKRLIKDFDREIKDEETKSSP 80
           T  A S  F+KL +I     +D     ++L  + G   E K+LI+DFD E + E  ++  
Sbjct: 3   TSAASSEHFEKLHEIFRGLHEDLRGVPERLLGMAG-TEEKKKLIRDFD-EKQQEANETLA 62

Query: 81  EVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVSEPTAD---------- 140
           E+ ++L   + + +   N  ++  +TY   L     E+      + P A           
Sbjct: 63  EMEEEL---RYAPLSFRNPMMSKLRTYRKDLAKLHREVRSTPLTATPGARGDMKYGTYAV 122

Query: 141 DNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTEQMGRI 200
           +N  M    + + L+  G  +++   Q+IER+ ++  +T ++G++    L  Q +Q+ R 
Sbjct: 123 ENEHMNRLQSQRALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERT 182

Query: 201 VNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIV 233
            + L   + ++ K+ ++++ + R+V T+K ++  + L+   ++  +V
Sbjct: 183 KSRLVNTSENLSKSRKILRSMSRKVTTNKLLLSIVILLELAILGGLV 224

[Close]

BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A6J1EWD1 (novel plant SNARE 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436737 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.3e-139
Identity = 266/268 (99.25%), Postives = 267/268 (99.63%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MASALQMTPQLEQIH EIRDT+RALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDTYRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE
Sbjct: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 269
           KDIRDIPGLAPPAPARRLLYLRTPEHFE
Sbjct: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 268

[Close]

BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A6J1KDM4 (novel plant SNARE 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494705 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 4.8e-138
Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MASALQMT QLEQIH EIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTTQLEQIHGEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           EPTADDNVRMASSMTNQELIDAGKKTMDETD+AIERTQKVVEQTIEVGTQTAVTLKGQTE
Sbjct: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDKAIERTQKVVEQTIEVGTQTAVTLKGQTE 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 269
           KDIRDIPGLAPPAPARRLLYLRTPEHFE
Sbjct: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 268

[Close]

BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A6J1CB99 (novel plant SNARE 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009926 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 4.7e-133
Identity = 256/269 (95.17%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MA+ LQM+PQLEQIH EIRD FRALSNGFQ+LDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MATGLQMSPQLEQIHGEIRDNFRALSNGFQRLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEE+K+ PEV+KQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           EPTADDN++MASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE
Sbjct: 121 EPTADDNIQMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLR-TPEHFE 269
           KDIRDIPGLAPPAPARRLLYLR TPEHFE
Sbjct: 241 KDIRDIPGLAPPAPARRLLYLRTTPEHFE 269

[Close]

BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A5D3BXM9 (Putative plant SNARE 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00740 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.7e-132
Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MASALQMTPQLEQIH EIRD FRALSNGFQ+LDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDNFRALSNGFQRLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEE+K+ PEV+KQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           EPTADDNVRMASSMTNQELIDAGKKTMDETDQAI+RTQKVVEQTIEVGTQTA  LKGQT+
Sbjct: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIQRTQKVVEQTIEVGTQTAAQLKGQTD 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 269
           K IRDIPGLAPP PARRLLYLRT EHF+
Sbjct: 241 KSIRDIPGLAPPVPARRLLYLRTTEHFK 268

[Close]

BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A1S3C842 (novel plant SNARE 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497752 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.7e-132
Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MASALQMTPQLEQIH EIRD FRALSNGFQ+LDKIKDSNRQSKQLEELTGKMRECKRLIK
Sbjct: 1   MASALQMTPQLEQIHGEIRDNFRALSNGFQRLDKIKDSNRQSKQLEELTGKMRECKRLIK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120
           DFDREIKDEE+K+ PEV+KQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS
Sbjct: 61  DFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVS 120

Query: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTE 180
           EPTADDNVRMASSMTNQELIDAGKKTMDETDQAI+RTQKVVEQTIEVGTQTA  LKGQT+
Sbjct: 121 EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIQRTQKVVEQTIEVGTQTAAQLKGQTD 180

Query: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240
           QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN
Sbjct: 181 QMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNN 240

Query: 241 KDIRDIPGLAPPAPARRLLYLRTPEHFE 269
           K IRDIPGLAPP PARRLLYLRT EHF+
Sbjct: 241 KSIRDIPGLAPPVPARRLLYLRTTEHFK 268

[Close]

BLAST of Carg17527 vs. TAIR 10
Match: AT3G17440.1 (novel plant snare 13 )

HSP 1 Score: 412.1 bits (1058), Expect = 3.3e-115
Identity = 217/268 (80.97%), Postives = 248/268 (92.54%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MAS L M+PQLEQIH EIRD FRAL+NGFQ+LDKIKDS RQSKQLEELT KMRECKRL+K
Sbjct: 1   MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDRE+KDEE ++SPEV+KQLNDEKQSMIKELNS+VALRKTYM++LGNK+VELFD G GV
Sbjct: 61  EFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGV 120

Query: 121 S-EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQ 180
           S EPTA++NV++ASSM+NQEL+DAG K MDETDQAIER+++VVEQT+EVGTQTA  LKGQ
Sbjct: 121 SGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQ 180

Query: 181 TEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNP 240
           T+QMGR+VN LDTI FSIKKASQLVKEIGRQVATDKCIM FLFLIVCGV+AII+VKIVNP
Sbjct: 181 TDQMGRVVNHLDTIQFSIKKASQLVKEIGRQVATDKCIMGFLFLIVCGVVAIIIVKIVNP 240

Query: 241 NNKDIRDIPGLAPPAPARRLLYLRTPEH 267
           NNKDIRDIPGLAPPA +R+LLYLR  ++
Sbjct: 241 NNKDIRDIPGLAPPAQSRKLLYLRNQDY 268

[Close]

BLAST of Carg17527 vs. TAIR 10
Match: AT1G48240.1 (novel plant snare 12 )

HSP 1 Score: 401.4 bits (1030), Expect = 5.8e-112
Identity = 210/264 (79.55%), Postives = 243/264 (92.05%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MAS L M+P LEQIH EIRD FRAL+NGFQ+LDKIKDS+RQSKQLEEL  KMR+CKRL+K
Sbjct: 1   MASELPMSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDRE+KD E ++SP+V+KQLNDEKQSMIKELNS+VALRKTY+N+LGNK+VELFD G GV
Sbjct: 61  EFDRELKDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTLGNKKVELFDTGAGV 120

Query: 121 S-EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQ 180
           S EPTA++NV+MAS+M+NQEL+DAG K MDETDQAIER+++VV QT+EVGTQTA  LKGQ
Sbjct: 121 SGEPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQ 180

Query: 181 TEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNP 240
           T+QMGR+VN+LDTI FS+KKASQLVKEIGRQVATDKCIM FLFLIVCGVIAII+VKIVNP
Sbjct: 181 TDQMGRVVNDLDTIQFSLKKASQLVKEIGRQVATDKCIMAFLFLIVCGVIAIIIVKIVNP 240

Query: 241 NNKDIRDIPGLAPPAPARRLLYLR 263
           NNKDIRDIPGLAPPA +R+LLY R
Sbjct: 241 NNKDIRDIPGLAPPAQSRKLLYFR 264

[Close]

BLAST of Carg17527 vs. TAIR 10
Match: AT3G17440.2 (novel plant snare 13 )

HSP 1 Score: 321.2 bits (822), Expect = 7.7e-88
Identity = 171/212 (80.66%), Postives = 196/212 (92.45%), Query Frame = 0


Query: 1   MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK 60
           MAS L M+PQLEQIH EIRD FRAL+NGFQ+LDKIKDS RQSKQLEELT KMRECKRL+K
Sbjct: 1   MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVK 60

Query: 61  DFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEG-GV 120
           +FDRE+KDEE ++SPEV+KQLNDEKQSMIKELNS+VALRKTYM++LGNK+VELFD G GV
Sbjct: 61  EFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGV 120

Query: 121 S-EPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQ 180
           S EPTA++NV++ASSM+NQEL+DAG K MDETDQAIER+++VVEQT+EVGTQTA  LKGQ
Sbjct: 121 SGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQ 180

Query: 181 TEQMGRIVNELDTINFSIKKASQLVKEIGRQV 211
           T+QMGR+VN LDTI FSIKKASQLVKEIGRQV
Sbjct: 181 TDQMGRVVNHLDTIQFSIKKASQLVKEIGRQV 212

[Close]

BLAST of Carg17527 vs. TAIR 10
Match: AT2G35190.1 (novel plant snare 11 )

HSP 1 Score: 315.5 bits (807), Expect = 4.2e-86
Identity = 172/258 (66.67%), Postives = 211/258 (81.78%), Query Frame = 0


Query: 7   MTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIKDFDREI 66
           ++ +L +I  +I D FRALSNGFQKL+KIKD+NRQS+QLEELT KMR+CK LIKDFDREI
Sbjct: 7   VSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKDFDREI 66

Query: 67  KDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSL--GNKRVELFDEGGVSEPTA 126
           K  E+ +    ++ LND +QSM+KELNS+VAL+K Y ++L   NKRV+LFD  G  E   
Sbjct: 67  KSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFD--GPGEEHM 126

Query: 127 DDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTEQMGR 186
           ++NV +AS+M+NQEL+D G   MD+TDQAIER +K+V++TI VGT T+  LK QTEQM R
Sbjct: 127 EENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTEQMSR 186

Query: 187 IVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIR 246
           +VNELD+I+FS+KKAS+LVKEIGRQVATDKCIM FLFLIV GVIAII+VKIVNPNNKDIR
Sbjct: 187 VVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNKDIR 246

Query: 247 DIP--GLAPPAPARRLLY 261
           DIP  GLAPPA  RRLL+
Sbjct: 247 DIPGVGLAPPAMNRRLLW 262

The following BLAST results are available for this feature:

BLAST of Carg17527 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021089.1	1.6e-140	100.00	putative plant SNARE 13, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6594039.1	1.1e-139	99.63	putative plant SNARE 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023513592.1	9.0e-139	99.25	novel plant SNARE 13-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022930215.1	9.0e-139	99.25	novel plant SNARE 13-like isoform X1 [Cucurbita moschata]	[more]
XP_023000437.1	9.9e-138	98.88	novel plant SNARE 13-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg17527 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRP1	4.7e-114	80.97	Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1	[more]
Q9LNH6	8.2e-111	79.55	Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1	[more]
Q944A9	5.9e-85	66.67	Novel plant SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=NPSN11 PE=1 SV=2	[more]
Q2KIU0	6.7e-04	22.03	Vesicle transport through interaction with t-SNAREs homolog 1B OS=Bos taurus OX=...	[more]

BLAST of Carg17527 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWD1	4.3e-139	99.25	novel plant SNARE 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114367...	[more]
A0A6J1KDM4	4.8e-138	98.88	novel plant SNARE 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494705...	[more]
A0A6J1CB99	4.7e-133	95.17	novel plant SNARE 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009926 P...	[more]
A0A5D3BXM9	6.7e-132	94.40	Putative plant SNARE 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C842	6.7e-132	94.40	novel plant SNARE 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497752 PE=4 SV=...	[more]

BLAST of Carg17527 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17440.1	3.3e-115	80.97	novel plant snare 13	[more]
AT1G48240.1	5.8e-112	79.55	novel plant snare 12	[more]
AT3G17440.2	7.7e-88	80.66	novel plant snare 13	[more]
AT2G35190.1	4.2e-86	66.67	novel plant snare 11	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..72
None	No IPR available	GENE3D	1.20.5.110		coord: 135..214 e-value: 3.4E-15 score: 58.0
None	No IPR available	PANTHER	PTHR21230:SF73	BNAA01G36970D PROTEIN	coord: 1..254
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 1..254
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 134..207
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 139..206 e-value: 1.5E-6 score: 37.7
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 144..206 score: 10.747887
IPR005606	Sec20	PFAM	PF03908	Sec20	coord: 152..229 e-value: 1.9E-6 score: 27.7
IPR044766	NPSN/SNAP25-like, N-terminal SNARE domain	CDD	cd15861	SNARE_SNAP25N_23N_29N_SEC9N	coord: 143..205 e-value: 1.91023E-19 score: 77.9987

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17527-RA	Carg17527-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
biological_process	GO:0006906	vesicle fusion
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0031201	SNARE complex
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding