Carg21113 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTAGCATCCGAAGAAAGATCAAAGCTAAACCCGAACGCTCCGCTTTTCATCCCGGCCGCCTACCAGGTGGAGGATTTCTCCCCGCAATGGTGGCAACTGGTCACAACCTCGACATGGTACCATGACTACTGGCTGAGCCAACACCAAGAAGAGAGCGACTTCTCCTTGGATGGCGAGGACGATTATGACATTGCTGAATTCCTGCCACAGGCGTTAGATCTTGAAGGCAACGAAGACCTCCGCACCATGGAAGCTGAATTCGAGGAGTTTATTCAAGCTTCTCTCAATGAAGGGACCCAAGAACTTCCTTAA ATGTCTCTAGCATCCGAAGAAAGATCAAAGCTAAACCCGAACGCTCCGCTTTTCATCCCGGCCGCCTACCAGGTGGAGGATTTCTCCCCGCAATGGTGGCAACTGGTCACAACCTCGACATGGTACCATGACTACTGGCTGAGCCAACACCAAGAAGAGAGCGACTTCTCCTTGGATGGCGAGGACGATTATGACATTGCTGAATTCCTGCCACAGGCGTTAGATCTTGAAGGCAACGAAGACCTCCGCACCATGGAAGCTGAATTCGAGGAGTTTATTCAAGCTTCTCTCAATGAAGGGACCCAAGAACTTCCTTAA ATGTCTCTAGCATCCGAAGAAAGATCAAAGCTAAACCCGAACGCTCCGCTTTTCATCCCGGCCGCCTACCAGGTGGAGGATTTCTCCCCGCAATGGTGGCAACTGGTCACAACCTCGACATGGTACCATGACTACTGGCTGAGCCAACACCAAGAAGAGAGCGACTTCTCCTTGGATGGCGAGGACGATTATGACATTGCTGAATTCCTGCCACAGGCGTTAGATCTTGAAGGCAACGAAGACCTCCGCACCATGGAAGCTGAATTCGAGGAGTTTATTCAAGCTTCTCTCAATGAAGGGACCCAAGAACTTCCTTAA MSLASEERSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYHDYWLSQHQEESDFSLDGEDDYDIAEFLPQALDLEGNEDLRTMEAEFEEFIQASLNEGTQELP Homology
BLAST of Carg21113 vs. NCBI nr
Match: XP_022925173.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata] >KAG7027655.1 Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 216.5 bits (550), Expect = 1.1e-52 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Carg21113 vs. NCBI nr
Match: XP_023518865.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 210.3 bits (534), Expect = 8.0e-51 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Carg21113 vs. NCBI nr
Match: XP_022966499.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]) HSP 1 Score: 208.0 bits (528), Expect = 4.0e-50 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of Carg21113 vs. NCBI nr
Match: XP_023517029.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.2 bits (435), Expect = 2.4e-39 Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 0
BLAST of Carg21113 vs. NCBI nr
Match: XP_022978619.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima] >XP_022978620.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]) HSP 1 Score: 171.4 bits (433), Expect = 4.1e-39 Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 0
BLAST of Carg21113 vs. ExPASy Swiss-Prot
Match: Q39096 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 5.8e-20 Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Carg21113 vs. ExPASy Swiss-Prot
Match: Q94AR4 (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 6.5e-11 Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 0
BLAST of Carg21113 vs. ExPASy Swiss-Prot
Match: I1JIC4 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 6.5e-11 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of Carg21113 vs. ExPASy TrEMBL
Match: A0A6J1EEG6 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita moschata OX=3662 GN=LOC111432493 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 5.4e-53 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Carg21113 vs. ExPASy TrEMBL
Match: A0A6J1HTZ3 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111466133 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of Carg21113 vs. ExPASy TrEMBL
Match: A0A6J1IUI9 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111478542 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39 Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 0
BLAST of Carg21113 vs. ExPASy TrEMBL
Match: Q6ELF8 (Poly(A)-binding protein C-terminal interacting protein 243 OS=Cucumis sativus OX=3659 GN=Csa_4G214830 PE=2 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.4e-39 Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0
BLAST of Carg21113 vs. ExPASy TrEMBL
Match: A0A5A7TVP0 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00030 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.4e-39 Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0
BLAST of Carg21113 vs. TAIR 10
Match: AT2G41430.3 (dehydration-induced protein (ERD15) ) HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21 Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Carg21113 vs. TAIR 10
Match: AT2G41430.1 (dehydration-induced protein (ERD15) ) HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21 Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Carg21113 vs. TAIR 10
Match: AT2G41430.4 (dehydration-induced protein (ERD15) ) HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21 Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Carg21113 vs. TAIR 10
Match: AT2G41430.2 (dehydration-induced protein (ERD15) ) HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21 Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Carg21113 vs. TAIR 10
Match: AT2G41430.5 (dehydration-induced protein (ERD15) ) HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21 Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|