Carg16041 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16041
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	U1 small nuclear ribonucleoprotein 70 kDa-like
Location	Carg_Chr07: 2196120 .. 2201843 (-)
RNA-Seq Expression	Carg16041
Synteny	Carg16041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTCCGTCTTTTCGCTGCCGCCTCTCTTCTTCGTTCCCTACGTTGGGACACGATTATACCAATTAGATCCGAGCAGAAACCACTCACCGATGTTCTCCCTCCACTCGATTTGATTTCTCGTACAAATTCTTCGTTATTGTACTAGTCTTACCGACGATCGTGCGCTGCCATGGGAGATTACAATGATGCCTTCATGCGGAACCAAAACGCCGCGGTTCAGGCTCGTACCAAGGCCCAGAATCGTGCTAATGTCCTTCAGCTTAAGCTGGTAGGTGGAATGGTTTTCGATGATTATTGTTATTTCTGTAGGAGCGTTCGATTTTGTTTTGTTTGAAGAGAGCTAGGGTTTCAAGAAGTTATTTCGCATTCGTTCATTAGAAGAAATACGGATTTGTCTTTTTGTGTCGCAAAATTATGGATAAATGCTGCTGTAATAGGTCTTGCGTCTTCATGACGATCGGTTTTCGTTTTCATGTTTAGAGATGACAAATTAAGTTTTATCCGTTGAATGGCTCGTAAATTGTTACAACGTGCTGTCAATGTAAGGTGCAGTCTCTTGTTAAGGGAAAAAAAAGGGGAAAATTATTGTTAGAGGCAGATGGTGTGAAGCGATGACATAATATCATTATTGGGAGTTGAAGTGAGGATTATGGTTCTAGAAGAAGCTTAAAGTGTTTGTAGAACATTCGATTATGGAATCTTTCGGTTTCTTAATTTTGCTTCTTATGCAGATTGGGCAGAGTCATCCCACTGGTCTTACGGCCAATCTCCTGAAGCTCTTTGAGCCCCGACCGCCTTTGGAGTATAAGCCTCCACCAGAAAAAAGAAAATGTCCTCCATTAACAGGTTTTAATTACTTTTCAAAACTTGCATATCATTTTTTGATATTTTATGCACTTTCTAAAATTTATTTTTATTTTTACATTTCATTGTTTTTGCGGAGGGATATAATTCTATCTCATTTTGTTTCGAAGGGATGGCCCAGTTTGTGAGTCATTTTGCAGAACCTGATGATCCGGAATATGCACCCCCTGTTCAAGAGGGTGAAACTCCCGTAAGATGATTCACTTCTTAATGATTGTCAGATTGAATTTTAAACCATTCATACTCTCTCTCCAATACATATGTGTTGAGTATATGAATGTGTAATAAGGAAAATGAATATTAAGCTTATGACTTCAAGGCTCTATTGTCACTTACGGTGCCAAAGGGTTTGTGTTTTAAACACAGTTTTAGGATTAGAAATTAGGTGGCTTGTACATTTTTAGGCTAGTGGGTATCAAACAATTTATTTGGCCATGGTTTTTGAAGGAAGCAATGCTTTAATTGTCTTTAAACAACAGAGAAATCAGAAAGATACGATTAAACTGAACGTAGGAAACAATGTTCTAAAACAGCATCTGTGCTGCCTCTTACTTATGGTGGTATCTATTTTGCAGACTAGCAGTAGAAGTCTCAATTTTTTTTTTCCAACTAACTAGTTTATGAAGATTAATTGATGGTAGAAGTCTTAATTTTTTTTTCAGTCGCAAAGGAGGGCCAGAATTCACTTGTTAAGAATTGAAAAGGGTGCACAGAAAGCTGCCGAGGAGCTTCCAAAATGTGACAATCTCTTCAATACTTCAACACCATTTGTTAAAAGAAGTTCAATGTCTTGTGTCTTACCTACGTACTTTTGTGCAGATCTTGAACGTGACGATCCAAATGTTACTGGAGATCCATACAAAACTCTCTTTGTGGCTAGACTGGTGTGTAAAATGTAGTGTACATAGTTTTTTAGTCTAAGCTAATTGTTTTACTTAACATGATCGTTATCCGATGGCAGAACTACGAGACATCTGAGAGCAGAATCAAAAGAGAGTTTGAGTCTTATGGGCCAATCAAACGGGTAGGTATTTGAGCATCCTCATGGAGCTTGGTAAGAGGTTAATATTTGTGTGGTGAATTAAATGCTTCATTTTTACTATCAGAGAGTTTTTTGGGTAGTAATCATGTTTTTGGGTTCATTTTCTCCAAAGCTTAATTTTTTAGAATCTATACTATTCTAAACCACCGTCAGTTTGGTCTAGTGGTATCTCTAAGCAAGGATTTTCGTTGGTGGGTTGTCTTAGTTAACAGCTTTTCTTGTAATGTTTTTCGTTGTTGTAGCGATAATGAACCAGTTCATGCTTAATCTTCAAAATAACCCATCAAAAAGATTCCACTGGCCTTCCGAATTAACGACATGTCAAACAGGTCTCTTATTTGTATTGTTCTTTTAACCTTCTCCCCATTTAAACTAAAGTAGTCAAATGTTGTAGTGATAATGAACCAGTTCATGCTTAATCTTCAAAATAACCCATCAAAAAGATTCCACTGGCCTTCCGAATTAACGACATGTCAAACAGGTCTCTTATTTGTATTGTTCTTTTAACCTTCTCCCCATTTAAACTAAAGTAGTCAAATGTTGTAGTGATAATGAACCAGTTCATGCTTATTCTTCAAAATAACCCATCAAAAAGATTCCACTGGCCTTCTGAATTAACGACATGTCAAACAGGTCTCTTATTTATATTGTTCTTTTAACCTTCTCCCCATTTAAACTAAAGTAGTCAAATGGGTAAGTTTTTATGGGAGTAAATCATATTTCTACCTGACTGGATCGTTATGATGGAACCACTTTTGAAGAAAGATTAGTGCCAAACACCTCCCTGGATTCATCATTGATAATTCAAGCTCCTAATAGTCTCTCAGGTAAAGCTGCGGGTATGCAGTAATGACTTTCATTTGTATTTCATTTTCCTCGTAGCGACTGTGTCTTTGCCCAGACACAGTTGCACTATAGAATTCTCGAGGCATGATGTTAATAGGAAATTCCTTAGTAAAGTTCTATACATCAAGAATTCCTGGTAAGGAGGCAGTTATTCTACATTCAGCCAAATATTATTAATGATGTAAGTATTTCTACGGTTCGGATCCCAAAGATGGTGCGCTTCACCATGCATGGCAAAGCTGAAAATTTTAGGTTGGGCAGTGGAGTGATGTTCATTGTCTTTTGGCCTTAATATTCAAGCAACAATGGAGATTGTCAACTTCCCTATTTTTCTGCCTTGGGTAAAGCACATAGGGATTATTACCATCTCTTTCTCCTTTGAATTTTGTACTGCATGGATTTTCTGCTGCTAAAAGTATTACTTTTGGCTTTAAAGGCATCAAAAAAATTTCGTCGTTGAGAAGGTCTCCTGGTATTTCCTGTATTACATATACCTTTTTGCACTACTTGAAAAATAATTTCCCTGGTAAGGGGAGTTTAATGTGTTCAACAACTGGTAAAATGGCCCCAAATACTTCAGTTTTTCCAACTCTAGCTGGTGGTGATGCATCTCGCAATGGAAGCTCTATTATTTAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGTCTGCCGTGCCAATAGGATTAGATTATGATAAACGTTCTTATAGTATATGATCTATAAACTAATAGATCCTTTACGGAGAATGCATAATGGAAAGAGGTTTTAACTTTTCTTCTGCAATATGACTTCTTGTTTGTGTGATTTTCTTCGTTTTGCAGGTCCGATTGATTACAGACAAGGTGACAGGTAAACCTAAAGGCTATGCTTTCATTGAGTACATGCACAAAAGAGATATGAAAGGTTTGTCTCAATCAATTTGAATTTTGAACCCTTTCTATGTGATTAATTTCTCCTTTTGAAACTGGTTAATTTTCTTACCTCCATCTGAAATTATTCAGCTGCATATAAACAAGCTGATGGTAGGAAGATTGATGGTAGAAGGGTACTAGTGGATGTTGAGCGAGGTAGAACTGTACCAAATTGGCGTCCTCGTCGGCTGGGTGGTGGTCTTGGAACCACCAGAGTGGGAGGTGAAGAAAATAGCCAGAGGCATGCTGGAAGGTAATTGATATGATTTCAACAACTTCTGCTCTTTCAAGCGCATGCCTTTGAGAAATATTGATGATTATTGTACTATTGAACAGCACTATTGGAAGTGATTCTCGATCTGATGTTTTTGTGCCTTAGGAAGATATTTTTGTTGATTGCTGAAAAGTTATAAAAATGAGACTGAATTTAATGTATTATTTTCCATGCTGAAAGCATTTGTAATTTGTTCAGGGAGCAACAGCAATCTGGAGCACCATCTCGATCAGAGGAGCCTAGGGCTCGTGAAGATCGCCATGGAGAGCGGTATGATGGTCCATATCTTGATCCTTTTAGATCAACATTTTTTGTCAACATTTTATGCTTCTTTCAAGTAATAATTTCAGCATTTAAACATAACTTCAATTTATTGTTAATTTTATGATACCACGTAAAATTAGGCTTCAATTTAATGTTTTCAGAGATAGGGAAAAGTCTTATGAAAAAGGAAGAGACAGAGAAAGAGAGAGAGAGAAGTCTCGGGAACGTTCCCACGATAGATCTAAGGATCGTGATCTCAGAGAAGACAGACATCACAGAGATCGTGATAGGACAAGAGATAGGGATAGGGATAGAGAAAAGGAAAGGGAAAGAGAGAGAGACCGCGGGCATGACCGTGATAGAACACGTGATCGTGATCGAGGAAGGGATCGAGGTCGTGATTATGAGCGTGACAGAGATCGTGATCGGGATCGTCATCGGGACAGAGATAGGGAGAGGGATCGGGATCACGAAGGAGGGGGATATGCAGACCCTGATCGTGGTCGCTCCCATGATAGGGAATCTGATTATGATCGGGTAGATTCGAAATACGAAAAGGACAGACATGGTGATAGGGACAAAGATATTGATCCTGGTGAAACTGAGGATGGTCATGGGTGGTATGATCAGCCTGCGCATGGGCACAGACACCCACCAGATACTGATCATGATCCCCAATACTATGATCACTTTGAACACAACCGAAGTCGAGAGCAATATGAGCACCCCGAACATCATGGCCAAGATCGTTATGATCAGTATGATAGAATGGAGGATGATTACCATTACGAACGTGGCACTTCTGAAACACGTGATAGAGAGAGGTCGCGTGATTTGAATCATGAATATAGACGCACAGAGAGATCTCATTCAAGAGAGTATTAGTTTCTCATGCTGCAGTGTGATCTGATGGTAAAGTATCTGCTCACTTTCTTCCCTTTTCTTTATATAATTTAGAAGCCATCCCTTCTCCCATGTGAATGTTGTTTTCCAGTTCTCCCATGTGAATGTTGTTTCCAGGTTATGATGATAGATACCAAATTTCAGGATAATATCATGTAGGTGCTGTGATGATCGGTGTTGGAATTGTCTTCTTCTTTTGTTAATTGGCCTCAAGTTGCCCAAACATCGTTGCATATGCTTGGTGCTGTATGTTCTGTTCTTCCGAGTGTTTCAGTTTCAGCCATGTTATGCAGATTTTTGCACAGTTTATGTATGTGCTAAAACTCCTGGACTTACTATGTATTAGTTTGTAGCCATGCTATTTAAGCTGATAGTGTTATAGAACGTTTTGAATGCTTGGTCCGATTACTGTCCTTTCGGTGGGAACAAGGTCAAATGCAGTGGATGGGGTTAGGTTTGTTTGCTATTGGATGGTGTTTAGGAGAAAACTGAAGCTATTAAAATGAAATTTGGTCGTGGTGACTGTCACTGTCTTGGAGATTATTATTATTACTATATTTTCGTTTTTTTAACATGATTATTTTGATTGTCCCAACCCCTCTCTTGAGTTCATTG

mRNA sequence

CATTTCCGTCTTTTCGCTGCCGCCTCTCTTCTTCGTTCCCTACGTTGGGACACGATTATACCAATTAGATCCGAGCAGAAACCACTCACCGATGTTCTCCCTCCACTCGATTTGATTTCTCGTACAAATTCTTCGTTATTGTACTAGTCTTACCGACGATCGTGCGCTGCCATGGGAGATTACAATGATGCCTTCATGCGGAACCAAAACGCCGCGGTTCAGGCTCGTACCAAGGCCCAGAATCGTGCTAATGTCCTTCAGCTTAAGCTGATTGGGCAGAGTCATCCCACTGGTCTTACGGCCAATCTCCTGAAGCTCTTTGAGCCCCGACCGCCTTTGGAGTATAAGCCTCCACCAGAAAAAAGAAAATGTCCTCCATTAACAGGGATGGCCCAGTTTGTGAGTCATTTTGCAGAACCTGATGATCCGGAATATGCACCCCCTGTTCAAGAGGGTGAAACTCCCTCGCAAAGGAGGGCCAGAATTCACTTGTTAAGAATTGAAAAGGGTGCACAGAAAGCTGCCGAGGAGCTTCCAAAATGTGACAATCTCTTCAATACTTCAACACCATTTGTTAAAAGAAGTTCAATGTCTTGTGTCTTACCTACGTACTTTTGTGCAGATCTTGAACGTGACGATCCAAATGTTACTGGAGATCCATACAAAACTCTCTTTGTGGCTAGACTGAACTACGAGACATCTGAGAGCAGAATCAAAAGAGAGTTTGAGTCTTATGGGCCAATCAAACGGGTAGCGATAATGAACCAGTTCATGCTTAATCTTCAAAATAACCCATCAAAAAGATTCCACTGGCCTTCCGAATTAACGACATGTCAAACAGCGACTGTGTCTTTGCCCAGACACAGTTGCACTATAGAATTCTCGAGGCATGATGTTAATAGGAAATTCCTTAGTAAAGTTCTATACATCAAGAATTCCTGGCATCAAAAAAATTTCGTCGTTGAGAAGGTCCGATTGATTACAGACAAGGTGACAGGTAAACCTAAAGGCTATGCTTTCATTGAGTACATGCACAAAAGAGATATGAAAGCTGCATATAAACAAGCTGATGGTAGGAAGATTGATGGTAGAAGGGTACTAGTGGATGTTGAGCGAGGTAGAACTGTACCAAATTGGCGTCCTCGTCGGCTGGGTGGTGGTCTTGGAACCACCAGAGTGGGAGGTGAAGAAAATAGCCAGAGGCATGCTGGAAGGGAGCAACAGCAATCTGGAGCACCATCTCGATCAGAGGAGCCTAGGGCTCGTGAAGATCGCCATGGAGAGCGAGATAGGGAAAAGTCTTATGAAAAAGGAAGAGACAGAGAAAGAGAGAGAGAGAAGTCTCGGGAACGTTCCCACGATAGATCTAAGGATCGTGATCTCAGAGAAGACAGACATCACAGAGATCGTGATAGGACAAGAGATAGGGATAGGGATAGAGAAAAGGAAAGGGAAAGAGAGAGAGACCGCGGGCATGACCGTGATAGAACACGTGATCGTGATCGAGGAAGGGATCGAGGTCGTGATTATGAGCGTGACAGAGATCGTGATCGGGATCGTCATCGGGACAGAGATAGGGAGAGGGATCGGGATCACGAAGGAGGGGGATATGCAGACCCTGATCGTGGTCGCTCCCATGATAGGGAATCTGATTATGATCGGGTAGATTCGAAATACGAAAAGGACAGACATGGTGATAGGGACAAAGATATTGATCCTGGTGAAACTGAGGATGGTCATGGGTGGTATGATCAGCCTGCGCATGGGCACAGACACCCACCAGATACTGATCATGATCCCCAATACTATGATCACTTTGAACACAACCGAAGTCGAGAGCAATATGAGCACCCCGAACATCATGGCCAAGATCGTTATGATCAGTATGATAGAATGGAGGATGATTACCATTACGAACGTGGCACTTCTGAAACACGTGATAGAGAGAGGTCGCGTGATTTGAATCATGAATATAGACGCACAGAGAGATCTCATTCAAGAGAGTATTAGTTTCTCATGCTGCAGTGTGATCTGATGGATAATATCATGTAGGTGCTGTGATGATCGGTGTTGGAATTGTCTTCTTCTTTTGTTAATTGGCCTCAAGTTGCCCAAACATCGTTGCATATGCTTGGTGCTGTATGTTCTGTTCTTCCGAGTGTTTCAGTTTCAGCCATGTTATGCAGATTTTTGCACAGTTTATGTATGTGCTAAAACTCCTGGACTTACTATGTATTAGTTTGTAGCCATGCTATTTAAGCTGATAGTGTTATAGAACGTTTTGAATGCTTGGTCCGATTACTGTCCTTTCGGTGGGAACAAGGTCAAATGCAGTGGATGGGGTTAGGTTTGTTTGCTATTGGATGGTGTTTAGGAGAAAACTGAAGCTATTAAAATGAAATTTGGTCGTGGTGACTGTCACTGTCTTGGAGATTATTATTATTACTATATTTTCGTTTTTTTAACATGATTATTTTGATTGTCCCAACCCCTCTCTTGAGTTCATTG

Coding sequence (CDS)

ATGGGAGATTACAATGATGCCTTCATGCGGAACCAAAACGCCGCGGTTCAGGCTCGTACCAAGGCCCAGAATCGTGCTAATGTCCTTCAGCTTAAGCTGATTGGGCAGAGTCATCCCACTGGTCTTACGGCCAATCTCCTGAAGCTCTTTGAGCCCCGACCGCCTTTGGAGTATAAGCCTCCACCAGAAAAAAGAAAATGTCCTCCATTAACAGGGATGGCCCAGTTTGTGAGTCATTTTGCAGAACCTGATGATCCGGAATATGCACCCCCTGTTCAAGAGGGTGAAACTCCCTCGCAAAGGAGGGCCAGAATTCACTTGTTAAGAATTGAAAAGGGTGCACAGAAAGCTGCCGAGGAGCTTCCAAAATGTGACAATCTCTTCAATACTTCAACACCATTTGTTAAAAGAAGTTCAATGTCTTGTGTCTTACCTACGTACTTTTGTGCAGATCTTGAACGTGACGATCCAAATGTTACTGGAGATCCATACAAAACTCTCTTTGTGGCTAGACTGAACTACGAGACATCTGAGAGCAGAATCAAAAGAGAGTTTGAGTCTTATGGGCCAATCAAACGGGTAGCGATAATGAACCAGTTCATGCTTAATCTTCAAAATAACCCATCAAAAAGATTCCACTGGCCTTCCGAATTAACGACATGTCAAACAGCGACTGTGTCTTTGCCCAGACACAGTTGCACTATAGAATTCTCGAGGCATGATGTTAATAGGAAATTCCTTAGTAAAGTTCTATACATCAAGAATTCCTGGCATCAAAAAAATTTCGTCGTTGAGAAGGTCCGATTGATTACAGACAAGGTGACAGGTAAACCTAAAGGCTATGCTTTCATTGAGTACATGCACAAAAGAGATATGAAAGCTGCATATAAACAAGCTGATGGTAGGAAGATTGATGGTAGAAGGGTACTAGTGGATGTTGAGCGAGGTAGAACTGTACCAAATTGGCGTCCTCGTCGGCTGGGTGGTGGTCTTGGAACCACCAGAGTGGGAGGTGAAGAAAATAGCCAGAGGCATGCTGGAAGGGAGCAACAGCAATCTGGAGCACCATCTCGATCAGAGGAGCCTAGGGCTCGTGAAGATCGCCATGGAGAGCGAGATAGGGAAAAGTCTTATGAAAAAGGAAGAGACAGAGAAAGAGAGAGAGAGAAGTCTCGGGAACGTTCCCACGATAGATCTAAGGATCGTGATCTCAGAGAAGACAGACATCACAGAGATCGTGATAGGACAAGAGATAGGGATAGGGATAGAGAAAAGGAAAGGGAAAGAGAGAGAGACCGCGGGCATGACCGTGATAGAACACGTGATCGTGATCGAGGAAGGGATCGAGGTCGTGATTATGAGCGTGACAGAGATCGTGATCGGGATCGTCATCGGGACAGAGATAGGGAGAGGGATCGGGATCACGAAGGAGGGGGATATGCAGACCCTGATCGTGGTCGCTCCCATGATAGGGAATCTGATTATGATCGGGTAGATTCGAAATACGAAAAGGACAGACATGGTGATAGGGACAAAGATATTGATCCTGGTGAAACTGAGGATGGTCATGGGTGGTATGATCAGCCTGCGCATGGGCACAGACACCCACCAGATACTGATCATGATCCCCAATACTATGATCACTTTGAACACAACCGAAGTCGAGAGCAATATGAGCACCCCGAACATCATGGCCAAGATCGTTATGATCAGTATGATAGAATGGAGGATGATTACCATTACGAACGTGGCACTTCTGAAACACGTGATAGAGAGAGGTCGCGTGATTTGAATCATGAATATAGACGCACAGAGAGATCTCATTCAAGAGAGTATTAG

Protein sequence

MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEELPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRHDVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRDRDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGYADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTDHDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHEYRRTERSHSREY

Homology

[Close]

BLAST of Carg16041 vs. NCBI nr
Match: KAG7026797.1 (U1 small nuclear ribonucleoprotein 70 kDa [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR
Sbjct: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH
Sbjct: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
           DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD
Sbjct: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY
Sbjct: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540
           ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD
Sbjct: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540

Query: 541 HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHE 600
           HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHE
Sbjct: 541 HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHE 600

Query: 601 YRRTERSHSREY 613
           YRRTERSHSREY
Sbjct: 601 YRRTERSHSREY 612

[Close]

BLAST of Carg16041 vs. NCBI nr
Match: XP_023517571.1 (U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo] >XP_023517572.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 901.0 bits (2327), Expect = 5.8e-258
Identity = 506/612 (82.68%), Postives = 509/612 (83.17%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPK                            LERDDPNVTGDPYKTLFVARLNYETSESR
Sbjct: 121 LPKY---------------------------LERDDPNVTGDPYKTLFVARLNYETSESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 --------------------------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD
Sbjct: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRER+RDHE GGY
Sbjct: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERERDHE-GGY 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540
           ADPDRGRSHDRESDYDRVDSKYEKDRHGDR+KDIDPGETEDGHGWYDQPAHGHRHPPDTD
Sbjct: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDREKDIDPGETEDGHGWYDQPAHGHRHPPDTD 511

Query: 541 HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHE 600
           HDPQYYDHFEHNRSREQY+HPEHHGQDRYDQYDRMEDDY YERGTSETRDRERSRDLNHE
Sbjct: 541 HDPQYYDHFEHNRSREQYDHPEHHGQDRYDQYDRMEDDYRYERGTSETRDRERSRDLNHE 511

Query: 601 YRRTERSHSREY 613
           YRRTERSHSREY
Sbjct: 601 YRRTERSHSREY 511

[Close]

BLAST of Carg16041 vs. NCBI nr
Match: XP_022962873.1 (U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita moschata] >XP_022962874.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita moschata])

HSP 1 Score: 896.0 bits (2314), Expect = 1.9e-256
Identity = 503/612 (82.19%), Postives = 507/612 (82.84%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKA EE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAVEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPK                            LERDDPNVTGDPYKTLFVARLNYETSESR
Sbjct: 121 LPKY---------------------------LERDDPNVTGDPYKTLFVARLNYETSESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 --------------------------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRT DRD
Sbjct: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTIDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHE GG+
Sbjct: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHE-GGF 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540
           ADPDRGRSHDRESDYDR+DSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD
Sbjct: 481 ADPDRGRSHDRESDYDRIDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 511

Query: 541 HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHE 600
           HDPQYYDHFEHNRSREQY+HPEHHGQDRYDQYDRMEDDY YERGTSETRDRERSRDLNHE
Sbjct: 541 HDPQYYDHFEHNRSREQYDHPEHHGQDRYDQYDRMEDDYRYERGTSETRDRERSRDLNHE 511

Query: 601 YRRTERSHSREY 613
           YRRTERSHSRE+
Sbjct: 601 YRRTERSHSREF 511

[Close]

BLAST of Carg16041 vs. NCBI nr
Match: XP_023003041.1 (U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima] >XP_023003042.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima] >XP_023003043.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima] >XP_023003044.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima])

HSP 1 Score: 894.8 bits (2311), Expect = 4.1e-256
Identity = 502/612 (82.03%), Postives = 506/612 (82.68%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPK                            LERDDPNVTGDPYKTLFVARLNYETSESR
Sbjct: 121 LPKY---------------------------LERDDPNVTGDPYKTLFVARLNYETSESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 --------------------------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKD DLREDRHHRDRDRTRDRD
Sbjct: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDHDLREDRHHRDRDRTRDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDREKERERER+RGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDH GGGY
Sbjct: 421 RDREKERERERERGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDH-GGGY 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540
           ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQP HGHRHPPDTD
Sbjct: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPVHGHRHPPDTD 511

Query: 541 HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHE 600
           HDPQYYDHFEHNRSREQY+HPEHHGQDRYDQYDRMEDDY YERGTSETRDRERSRDLNHE
Sbjct: 541 HDPQYYDHFEHNRSREQYDHPEHHGQDRYDQYDRMEDDYRYERGTSETRDRERSRDLNHE 511

Query: 601 YRRTERSHSREY 613
           YRR +RSHSRE+
Sbjct: 601 YRRADRSHSREF 511

[Close]

BLAST of Carg16041 vs. NCBI nr
Match: KAG6594833.1 (U1 small nuclear ribonucleoprotein 70 kDa, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 833.9 bits (2153), Expect = 8.6e-238
Identity = 479/612 (78.27%), Postives = 479/612 (78.27%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPK                            LERDDPNVTGDPYKTLFVARLNYETSESR
Sbjct: 121 LPKY---------------------------LERDDPNVTGDPYKTLFVARLNYETSESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 --------------------------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD
Sbjct: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHE GGY
Sbjct: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHE-GGY 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540
           ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD
Sbjct: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 480

Query: 541 HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHE 600
           HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQ                             
Sbjct: 541 HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQ----------------------------- 480

Query: 601 YRRTERSHSREY 613
             RTERSHSREY
Sbjct: 601 --RTERSHSREY 480

[Close]

BLAST of Carg16041 vs. ExPASy Swiss-Prot
Match: Q42404 (U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana OX=3702 GN=RNU1 PE=1 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 5.6e-115
Identity = 307/614 (50.00%), Postives = 352/614 (57.33%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGD  D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPRPPLEYKP
Sbjct: 1   MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPP TGMAQFVS+FAEP DPEYAPP  E E PSQ+R RIH LR+EKG +KAAE+
Sbjct: 61  PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           L K D                             +DPN TGDPYKTLFV+RLNYE+SES+
Sbjct: 121 LKKYD---------------------------PNNDPNATGDPYKTLFVSRLNYESSESK 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     V L+TD++T KPKGYAFIEYMH RDMKAAYKQAD
Sbjct: 241 --------------------------VHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           G+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGG E        EQQ  G  S+SE
Sbjct: 301 GQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGE----EIVGEQQPQGRTSQSE 360

Query: 361 EP-RAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDR-TRD 420
           EP R RE      +REKS EKG++RER RE S E+  +RS+DR  RED+HHRDRD+  RD
Sbjct: 361 EPSRPRE------EREKSREKGKERERSRELSHEQPRERSRDRP-REDKHHRDRDQGGRD 420

Query: 421 RDRDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGG 480
           RDRD  ++R+R RDRG DRDR RDRDRGRDR           RD  RDR R+++RD+EGG
Sbjct: 421 RDRDSRRDRDRTRDRG-DRDR-RDRDRGRDR---------TSRDHDRDRSRKKERDYEGG 425

Query: 481 GYADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPD 540
            Y     GRS +R+++Y                     GE E+  G+Y+          D
Sbjct: 481 EYEHEGGGRSRERDAEY--------------------RGEPEETRGYYE----------D 425

Query: 541 TDHDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLN 600
              D   Y H                   RYD+ +  EDD+ YER               
Sbjct: 541 DQGDTDRYSH-------------------RYDKME--EDDFRYER--------------- 425

Query: 601 HEYRRTERSHSREY 613
            EY+R++RS SREY
Sbjct: 601 -EYKRSKRSESREY 425

[Close]

BLAST of Carg16041 vs. ExPASy Swiss-Prot
Match: Q66II8 (U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis OX=8364 GN=snrnp70 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-51
Identity = 200/537 (37.24%), Postives = 256/537 (47.67%), Query Frame = 0


Query: 42  LTANLLKLFEPRPPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGE 101
           L  NLL LF PR P+ Y P     P EK    P  G+A ++  F   +DP  APP    E
Sbjct: 5   LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREF---EDPRDAPPPTRAE 64

Query: 102 TPSQRRARIHLLRIEKGAQKAAEELPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDD 161
           T  +R  R    +IE+  Q    EL   D                             +D
Sbjct: 65  TREERMERKRREKIERRQQDVENELKIWD---------------------------PHND 124

Query: 162 PNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPS 221
            N  GD +KTLFVAR+NY+T+ES+++REFE YGPIKR                       
Sbjct: 125 QNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR----------------------- 184

Query: 222 ELTTCQTATVSLPRHSCTIEFSRHDVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTG 281
                                                             + ++ +K +G
Sbjct: 185 --------------------------------------------------IHMVYNKRSG 244

Query: 282 KPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV 341
           KP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERGRTV  WRPRRLGGGLG TR 
Sbjct: 245 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRR 304

Query: 342 GGEENSQRHAGRE--QQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRER-------- 401
           GG + + RH+GR+   +        E  R R +R  ERD+E+   + R RER        
Sbjct: 305 GGADVNIRHSGRDDTSRYDERDRDRERERDRRERSRERDKERERRRSRSRERRRRSRSRE 364

Query: 402 --EREKSRERSHDRSKDRDLREDRHHRDRDRTRD---RDRDREKERERERDRGHDRDR-- 461
             ER++SRERS D+ KD+D  +D+  +D+D+ RD   R R RE++RER+RDR    DR  
Sbjct: 365 KEERKRSRERSRDKDKDKDKDKDK-EKDKDKDRDRKRRSRSRERKRERDRDREKKEDRVE 424

Query: 462 ---------------------------------TRDRDRGRDRGRDYERDRDRDRDRHRD 521
                                             RDRDR RDR +D ++DRDRDRDR R 
Sbjct: 425 GEVPESVDVPQDDAQTGDLGIDGIELKQEPEEKNRDRDRERDREKDRDKDRDRDRDRRRS 431

Query: 522 -RDRERDRDHEGGGYADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDG 523
            RDRERD+D E     D DR R  DR+ D DR D K E+DR GDR +  +    ++G
Sbjct: 485 HRDRERDKDRE----RDRDRRRDRDRDRDRDR-DHKRERDR-GDRGEKREERVPDNG 431

[Close]

BLAST of Carg16041 vs. ExPASy Swiss-Prot
Match: P09406 (U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus laevis OX=8355 GN=snrnp70 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.4e-49
Identity = 196/536 (36.57%), Postives = 257/536 (47.95%), Query Frame = 0


Query: 42  LTANLLKLFEPRPPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGE 101
           L  NLL LF PR P+ Y P     P EK    P  G+A ++  F   +DP  APP    E
Sbjct: 5   LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREF---EDPRDAPPPTRAE 64

Query: 102 TPSQRRARIHLLRIEKGAQKAAEELPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDD 161
           T  +R  R    +IE+  Q    EL   D                             +D
Sbjct: 65  TREERMERKRREKIERRQQDVENELKIWD---------------------------PHND 124

Query: 162 PNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPS 221
            N  GD +KTLFVAR+NY+T+ES+++REFE YGPIKR+                      
Sbjct: 125 QNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRI---------------------- 184

Query: 222 ELTTCQTATVSLPRHSCTIEFSRHDVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTG 281
                                            ++Y K S                + +G
Sbjct: 185 --------------------------------HIVYNKGS----------------EGSG 244

Query: 282 KPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV 341
           KP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERGRTV  WRPRRLGGGLG TR 
Sbjct: 245 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRR 304

Query: 342 GGEENSQRHAGR-------EQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRERERE 401
           GG + + RH+GR       E+ +     R E  R RE    ER R +S E+ R      +
Sbjct: 305 GGADVNIRHSGRDDTSRYDERDRERERDRRERSREREKEPRERRRSRSRERRRKSRSREK 364

Query: 402 KSRERSHDRSKDRDLREDRHHRDRD---------RTRDRDRDREKERER----------- 461
           + R+R+ ++SKD+D  +D+ ++DRD         R R+RDRDREK+ ER           
Sbjct: 365 EERKRTREKSKDKDKEKDKDNKDRDRKRRSRSRERKRERDRDREKKEERVEAEVPEADDA 424

Query: 462 ----------------------ERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDR-HRD 521
                                 E+ R  DR+R RDR++G ++ RD +RDRDRDR R HRD
Sbjct: 425 PQDDAQIGDLGIDGIELKQEPEEKSRERDRERDRDREKG-EKDRDKDRDRDRDRRRSHRD 431

Query: 522 RDRERDRDHEGGGYADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDG 523
           RDRE+DRD       D DR R  DR+ + D+ D K E+DR GDR +  +    ++G
Sbjct: 485 RDREKDRDR------DRDRRRDRDRDRERDK-DHKRERDR-GDRSEKREERVPDNG 431

[Close]

BLAST of Carg16041 vs. ExPASy Swiss-Prot
Match: Q1RMR2 (U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus OX=9913 GN=SNRNP70 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.7e-45
Identity = 190/541 (35.12%), Postives = 241/541 (44.55%), Query Frame = 0


Query: 42  LTANLLKLFEPRPPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGE 101
           L  NLL LF PR P+ Y P     P EK    P  G+A ++  F   +DP  APP    E
Sbjct: 5   LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREF---EDPRDAPPPTRAE 64

Query: 102 TPSQRRARIHLLRIEKGAQKAAEELPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDD 161
           T  +R  R    +IE+  Q+   EL   D                             +D
Sbjct: 65  TREERMERKRREKIERRQQEVETELKMWD---------------------------PHND 124

Query: 162 PNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPS 221
           PN  GD +KTLFVAR+NY+T+ES+++REFE YGPIKR                       
Sbjct: 125 PNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR----------------------- 184

Query: 222 ELTTCQTATVSLPRHSCTIEFSRHDVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTG 281
                                                             + ++  K +G
Sbjct: 185 --------------------------------------------------IHMVYSKRSG 244

Query: 282 KPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV 341
           KP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERGRTV  WRPRRLGGGLG TR 
Sbjct: 245 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRR 304

Query: 342 GGEENSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSH 401
           GG + + RH+GR+            P    DR  +R+RE+  E+ R+R++ERE+ R RS 
Sbjct: 305 GGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERERR-ERSRERDKERERRRSRSR 364

Query: 402 D---RSKDRDLREDRHHRDRDRTRDRDRDREKERERERDR-------------------- 461
           D   RS+ RD  E R  R+R + +DRDR R   R RER R                    
Sbjct: 365 DRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERERKEELRGGGGGGGDMA 424

Query: 462 ---------------------GHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERD 521
                                G D    + RDR RDR R +  +R+R RDR RDRDRE  
Sbjct: 425 EPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRDRRRSHRSERERRRDRDRDRDREHK 432

Query: 522 RDHEGGGYADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHG 534
           R   GG     DRGR   R       D+  E   +  RD  +   E+E G G Y  P +G
Sbjct: 485 RGERGG-----DRGRDEARGGGGGGQDNGLEGLGNDGRDMYM---ESEGGDG-YLAPENG 432

[Close]

BLAST of Carg16041 vs. ExPASy Swiss-Prot
Match: P08621 (U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens OX=9606 GN=SNRNP70 PE=1 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 2.6e-43
Identity = 191/540 (35.37%), Postives = 243/540 (45.00%), Query Frame = 0


Query: 42  LTANLLKLFEPRPPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGE 101
           L  NLL LF PR P+ Y P     P EK    P  G+A ++  F   +DP  APP    E
Sbjct: 5   LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREF---EDPRDAPPPTRAE 64

Query: 102 TPSQRRARIHLLRIEKGAQKAAEELPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDD 161
           T  +R  R    +IE+  Q+   EL   D                             +D
Sbjct: 65  TREERMERKRREKIERRQQEVETELKMWD---------------------------PHND 124

Query: 162 PNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPS 221
           PN  GD +KTLFVAR+NY+T+ES+++REFE YGPIKR                       
Sbjct: 125 PNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR----------------------- 184

Query: 222 ELTTCQTATVSLPRHSCTIEFSRHDVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTG 281
                                                             + ++  K +G
Sbjct: 185 --------------------------------------------------IHMVYSKRSG 244

Query: 282 KPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV 341
           KP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERGRTV  WRPRRLGGGLG TR 
Sbjct: 245 KPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRR 304

Query: 342 GGEENSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSH 401
           GG + + RH+GR+            P    DR  +R+RE+  E+ R+R++ERE+ R RS 
Sbjct: 305 GGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERERR-ERSRERDKERERRRSRSR 364

Query: 402 D---RSKDRDLREDRHHRDRDRTRDRDRDREKERERERDR-------------------- 461
           D   RS+ RD  E R  R+R + +DRDR R   R RER R                    
Sbjct: 365 DRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERERKEELRGGGGDMAEPS 424

Query: 462 ------------------GHD--RDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDR 521
                             G D   ++ RDRDR R R    ER+R RDRDR RDRDRE  R
Sbjct: 425 EAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKR 430

Query: 522 DHEGGGYADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGH 534
              G      +RGR   R     + D+  E   +  RD  +   E+E G G Y  P +G+
Sbjct: 485 GERGS-----ERGRDEARGGGGGQ-DNGLEGLGNDSRDMYM---ESEGGDG-YLAPENGY 430

[Close]

BLAST of Carg16041 vs. ExPASy TrEMBL
Match: A0A6J1HIB1 (U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111463239 PE=4 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 9.0e-257
Identity = 503/612 (82.19%), Postives = 507/612 (82.84%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKA EE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAVEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPK                            LERDDPNVTGDPYKTLFVARLNYETSESR
Sbjct: 121 LPKY---------------------------LERDDPNVTGDPYKTLFVARLNYETSESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 --------------------------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRT DRD
Sbjct: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTIDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHE GG+
Sbjct: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHE-GGF 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540
           ADPDRGRSHDRESDYDR+DSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD
Sbjct: 481 ADPDRGRSHDRESDYDRIDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 511

Query: 541 HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHE 600
           HDPQYYDHFEHNRSREQY+HPEHHGQDRYDQYDRMEDDY YERGTSETRDRERSRDLNHE
Sbjct: 541 HDPQYYDHFEHNRSREQYDHPEHHGQDRYDQYDRMEDDYRYERGTSETRDRERSRDLNHE 511

Query: 601 YRRTERSHSREY 613
           YRRTERSHSRE+
Sbjct: 601 YRRTERSHSREF 511

[Close]

BLAST of Carg16041 vs. ExPASy TrEMBL
Match: A0A6J1KS72 (U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111496769 PE=4 SV=1)

HSP 1 Score: 894.8 bits (2311), Expect = 2.0e-256
Identity = 502/612 (82.03%), Postives = 506/612 (82.68%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPK                            LERDDPNVTGDPYKTLFVARLNYETSESR
Sbjct: 121 LPKY---------------------------LERDDPNVTGDPYKTLFVARLNYETSESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 --------------------------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKD DLREDRHHRDRDRTRDRD
Sbjct: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDHDLREDRHHRDRDRTRDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDREKERERER+RGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDH GGGY
Sbjct: 421 RDREKERERERERGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDH-GGGY 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540
           ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQP HGHRHPPDTD
Sbjct: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPVHGHRHPPDTD 511

Query: 541 HDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLNHE 600
           HDPQYYDHFEHNRSREQY+HPEHHGQDRYDQYDRMEDDY YERGTSETRDRERSRDLNHE
Sbjct: 541 HDPQYYDHFEHNRSREQYDHPEHHGQDRYDQYDRMEDDYRYERGTSETRDRERSRDLNHE 511

Query: 601 YRRTERSHSREY 613
           YRR +RSHSRE+
Sbjct: 601 YRRADRSHSREF 511

[Close]

BLAST of Carg16041 vs. ExPASy TrEMBL
Match: A0A6J1BSC4 (U1 small nuclear ribonucleoprotein 70 kDa OS=Momordica charantia OX=3673 GN=LOC111005312 PE=4 SV=1)

HSP 1 Score: 818.5 bits (2113), Expect = 1.8e-233
Identity = 472/614 (76.87%), Postives = 494/614 (80.46%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQ+GETP+QRRARIHLLRIEKGA+KAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAQRRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPK                            LERDDPNVTGDPYKTLFVARLNYET+ESR
Sbjct: 121 LPKY---------------------------LERDDPNVTGDPYKTLFVARLNYETTESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 --------------------------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEN+QRH+GREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENNQRHSGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPR REDRHGERDREKS+EKGRDREREREKSRERSH+RSKDRDLREDRHHRDRDRTRDRD
Sbjct: 361 EPRGREDRHGERDREKSHEKGRDREREREKSRERSHERSKDRDLREDRHHRDRDRTRDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDR  ERERERDRG+DRD+TRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDR+HE  GY
Sbjct: 421 RDR--ERERERDRGYDRDKTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRNHE-DGY 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540
            +PDRGRSHDRESDYDRV+SKYEKDRHGDRD++ID  ETEDG GWYDQ  HGHRH PD D
Sbjct: 481 PEPDRGRSHDRESDYDRVESKYEKDRHGDRDREIDRTETEDGRGWYDQSEHGHRH-PDPD 510

Query: 541 HDPQYYDHFEHNRSREQY-EHPE-HHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLN 600
           HDPQYYDHFEHNR R QY ++PE HH QDRYDQYDRMEDDYHYERGTSE+ D+ERSRD+N
Sbjct: 541 HDPQYYDHFEHNRGRGQYDDNPEGHHDQDRYDQYDRMEDDYHYERGTSESHDKERSRDMN 510

Query: 601 HEYRRTERSHSREY 613
           HEYRR+ERSHSREY
Sbjct: 601 HEYRRSERSHSREY 510

[Close]

BLAST of Carg16041 vs. ExPASy TrEMBL
Match: A0A0A0KGZ1 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502610 PE=4 SV=1)

HSP 1 Score: 792.3 bits (2045), Expect = 1.4e-225
Identity = 459/614 (74.76%), Postives = 487/614 (79.32%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQ+GETP++RRARIHLLRIEKGA+KAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPTERRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPK                            LERDDPNVTGDPYKTLFVARLNYET+ESR
Sbjct: 121 LPKY---------------------------LERDDPNVTGDPYKTLFVARLNYETTESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 --------------------------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRH+GREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPR REDRHGERDREKSY+KGRDRER+REKSRE SH+RSK+RD+REDRHHRDRDRTRDRD
Sbjct: 361 EPRVREDRHGERDREKSYDKGRDRERDREKSREHSHERSKERDVREDRHHRDRDRTRDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDR+++RER+RDRG+DRDRT  RDRGRDRGRDYE  RDRDRDRHRDRDRER+RDHE GGY
Sbjct: 421 RDRDRDRERDRDRGYDRDRT--RDRGRDRGRDYE--RDRDRDRHRDRDRERERDHE-GGY 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPDTD 540
            DPDRGRSHDR+ DYDRV+SKYEKDRHGDRD+D+D  ETEDG GWYDQP HGHR   D D
Sbjct: 481 PDPDRGRSHDRD-DYDRVESKYEKDRHGDRDRDVDRAETEDGRGWYDQPEHGHR---DAD 505

Query: 541 HDPQYYDHFEHNRSREQYEHPE-HHGQDRYDQY-DRMEDDYHYERGTSETRDRERSRDLN 600
           HDPQYYDHFEHNR R QY+ PE H  QDRYDQY DRM+DDYHYERG SE+ DRERSRDLN
Sbjct: 541 HDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLN 505

Query: 601 HEYRRTERSHSREY 613
           HEY+R+ERSHSREY
Sbjct: 601 HEYKRSERSHSREY 505

[Close]

BLAST of Carg16041 vs. ExPASy TrEMBL
Match: A0A1S3B1S2 (U1 small nuclear ribonucleoprotein 70 kDa OS=Cucumis melo OX=3656 GN=LOC103485041 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.7e-223
Identity = 462/616 (75.00%), Postives = 486/616 (78.90%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQ+GETP++RRARIHLLRIEKGA+KAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           LPK                            LERDDPNVTGDPYKTLFVARLNYET+ESR
Sbjct: 121 LPKY---------------------------LERDDPNVTGDPYKTLFVARLNYETTESR 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Sbjct: 241 --------------------------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRH+GREQQQSGAPSRSE
Sbjct: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSE 360

Query: 361 EPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDRTRDRD 420
           EPRAREDRHGERDREKSY+KGRDREREREKSRE SH+RSK+RD+REDRHHRDRDRTRDRD
Sbjct: 361 EPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSKERDVREDRHHRDRDRTRDRD 420

Query: 421 RDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGGGY 480
           RDR  +RER+RDRG+DRDRT  RDRGRDRGRDYE  RDRDRDRHRDRDRERDRDHE GGY
Sbjct: 421 RDR--DRERDRDRGYDRDRT--RDRGRDRGRDYE--RDRDRDRHRDRDRERDRDHE-GGY 480

Query: 481 ADPDRGRSHDRESDYDRVDSKYEKDRHG--DRDKDIDPGETEDGHGWYDQPAHGHRHPPD 540
            DPDRGRSHDR+ DYDRV+SKYEKDRHG  DRD+D+D  ETEDG GWYDQP HGHR   D
Sbjct: 481 PDPDRGRSHDRD-DYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR---D 505

Query: 541 TDHDPQYYDHFEHNRSREQYEHPE-HHGQDRYDQY-DRMEDDYHYERGTSETRDRERSRD 600
            DHDPQYYDHFEHNR R QY+ PE H  QDRYDQY DRM+DDYHYERG SE+ DRERSRD
Sbjct: 541 ADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRD 505

Query: 601 LNHEYRRTERSHSREY 613
           LNHEY+R+ERSHSREY
Sbjct: 601 LNHEYKRSERSHSREY 505

[Close]

BLAST of Carg16041 vs. TAIR 10
Match: AT3G50670.1 (U1 small nuclear ribonucleoprotein-70K )

HSP 1 Score: 416.4 bits (1069), Expect = 4.0e-116
Identity = 307/614 (50.00%), Postives = 352/614 (57.33%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGD  D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPRPPLEYKP
Sbjct: 1   MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPP TGMAQFVS+FAEP DPEYAPP  E E PSQ+R RIH LR+EKG +KAAE+
Sbjct: 61  PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           L K D                             +DPN TGDPYKTLFV+RLNYE+SES+
Sbjct: 121 LKKYD---------------------------PNNDPNATGDPYKTLFVSRLNYESSESK 180

Query: 181 IKREFESYGPIKRVAIMNQFMLNLQNNPSKRFHWPSELTTCQTATVSLPRHSCTIEFSRH 240
           IKREFESYGPIKR                                               
Sbjct: 181 IKREFESYGPIKR----------------------------------------------- 240

Query: 241 DVNRKFLSKVLYIKNSWHQKNFVVEKVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD 300
                                     V L+TD++T KPKGYAFIEYMH RDMKAAYKQAD
Sbjct: 241 --------------------------VHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQAD 300

Query: 301 GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHAGREQQQSGAPSRSE 360
           G+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGG E        EQQ  G  S+SE
Sbjct: 301 GQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGE----EIVGEQQPQGRTSQSE 360

Query: 361 EP-RAREDRHGERDREKSYEKGRDREREREKSRERSHDRSKDRDLREDRHHRDRDR-TRD 420
           EP R RE      +REKS EKG++RER RE S E+  +RS+DR  RED+HHRDRD+  RD
Sbjct: 361 EPSRPRE------EREKSREKGKERERSRELSHEQPRERSRDRP-REDKHHRDRDQGGRD 420

Query: 421 RDRDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDRHRDRDRERDRDHEGG 480
           RDRD  ++R+R RDRG DRDR RDRDRGRDR           RD  RDR R+++RD+EGG
Sbjct: 421 RDRDSRRDRDRTRDRG-DRDR-RDRDRGRDR---------TSRDHDRDRSRKKERDYEGG 425

Query: 481 GYADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETEDGHGWYDQPAHGHRHPPD 540
            Y     GRS +R+++Y                     GE E+  G+Y+          D
Sbjct: 481 EYEHEGGGRSRERDAEY--------------------RGEPEETRGYYE----------D 425

Query: 541 TDHDPQYYDHFEHNRSREQYEHPEHHGQDRYDQYDRMEDDYHYERGTSETRDRERSRDLN 600
              D   Y H                   RYD+ +  EDD+ YER               
Sbjct: 541 DQGDTDRYSH-------------------RYDKME--EDDFRYER--------------- 425

Query: 601 HEYRRTERSHSREY 613
            EY+R++RS SREY
Sbjct: 601 -EYKRSKRSESREY 425

[Close]

BLAST of Carg16041 vs. TAIR 10
Match: AT3G50670.2 (U1 small nuclear ribonucleoprotein-70K )

HSP 1 Score: 262.3 bits (669), Expect = 9.7e-70
Identity = 135/194 (69.59%), Postives = 146/194 (75.26%), Query Frame = 0


Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
           MGD  D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPRPPLEYKP
Sbjct: 1   MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
           PPEKRKCPP TGMAQFVS+FAEP DPEYAPP  E E PSQ+R RIH LR+EKG +KAAE+
Sbjct: 61  PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120

Query: 121 LPKCDNLFNTSTPFVKRSSMSCVLPTYFCADLERDDPNVTGDPYKTLFVARLNYETSESR 180
           L K D                             +DPN TGDPYKTLFV+RLNYE+SES+
Sbjct: 121 LKKYD---------------------------PNNDPNATGDPYKTLFVSRLNYESSESK 167

Query: 181 IKREFESYGPIKRV 195
           IKREFESYGPIKRV
Sbjct: 181 IKREFESYGPIKRV 167

[Close]

BLAST of Carg16041 vs. TAIR 10
Match: AT5G53440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 9.9e-06
Identity = 84/202 (41.58%), Postives = 103/202 (50.99%), Query Frame = 0


Query: 351 QQSGAPSRSEEP---RAREDRHGERDREKSYEKGRDREREREKSRE----RSHDRSKDRD 410
           +Q G   R + P     R D    RD  K   K +D +   E   E       +R++D D
Sbjct: 251 KQKGDKQRDDRPTKEHLRSDEKLTRDESKKKSKFQDNDHGHEPDSELDGYHERERNRDYD 310

Query: 411 LREDRHHRDRDRTRDRDRDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRDRDR 470
              DR+ RDR+RTRDRDRD E++R+R+R    DRDR RDRDR     RDYE DR  DRD 
Sbjct: 311 RESDRNERDRERTRDRDRDYERDRDRDR----DRDRERDRDR-----RDYEHDRYHDRDW 370

Query: 471 HRDRDRERDRDHEGGGYADPDRGRSHDRESDYDR---VDSKYEK-DRHGDRDKDIDPGET 530
            RDR R+RDRDHE        R R+HDRE D  R    D K  K DR  D D+D+     
Sbjct: 371 DRDRSRDRDRDHE--------RDRTHDREKDRSRDYYHDGKRSKSDRERDNDRDV--SRL 430

Query: 531 EDGHGWYDQPAHGHRHPPDTDH 542
           +D  G Y     G R P   D+
Sbjct: 431 DDQSGRYKDRRDGRRSPDYQDY 433

The following BLAST results are available for this feature:

BLAST of Carg16041 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026797.1	0.0e+00	100.00	U1 small nuclear ribonucleoprotein 70 kDa [Cucurbita argyrosperma subsp. argyros...	[more]
XP_023517571.1	5.8e-258	82.68	U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo] >XP_...	[more]
XP_022962873.1	1.9e-256	82.19	U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita moschata] >XP_02296287...	[more]
XP_023003041.1	4.1e-256	82.03	U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima] >XP_023003042....	[more]
KAG6594833.1	8.6e-238	78.27	U1 small nuclear ribonucleoprotein 70 kDa, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Carg16041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42404	5.6e-115	50.00	U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana OX=3702 GN=RNU...	[more]
Q66II8	2.6e-51	37.24	U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis OX=8364 GN=snrnp...	[more]
P09406	1.4e-49	36.57	U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus laevis OX=8355 GN=snrnp70 P...	[more]
Q1RMR2	4.7e-45	35.12	U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus OX=9913 GN=SNRNP70 PE=2 ...	[more]
P08621	2.6e-43	35.37	U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens OX=9606 GN=SNRNP70 PE=...	[more]

BLAST of Carg16041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIB1	9.0e-257	82.19	U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KS72	2.0e-256	82.03	U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1BSC4	1.8e-233	76.87	U1 small nuclear ribonucleoprotein 70 kDa OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0KGZ1	1.4e-225	74.76	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502610 PE=4 SV...	[more]
A0A1S3B1S2	1.7e-223	75.00	U1 small nuclear ribonucleoprotein 70 kDa OS=Cucumis melo OX=3656 GN=LOC10348504...	[more]

BLAST of Carg16041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50670.1	4.0e-116	50.00	U1 small nuclear ribonucleoprotein-70K	[more]
AT3G50670.2	9.7e-70	69.59	U1 small nuclear ribonucleoprotein-70K	[more]
AT5G53440.1	9.9e-06	41.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 166..312 e-value: 1.3E-15 score: 67.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 167..199 e-value: 1.7E-4 score: 21.4 coord: 264..309 e-value: 1.2E-9 score: 37.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 165..316 score: 12.287449
IPR022023	U1 small nuclear ribonucleoprotein of 70kDa N-terminal	PFAM	PF12220	U1snRNP70_N	coord: 41..121 e-value: 1.6E-14 score: 54.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 153..350 e-value: 2.0E-33 score: 117.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..612
None	No IPR available	PANTHER	PTHR13952	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD	coord: 264..437 coord: 154..198 coord: 1..125
None	No IPR available	PANTHER	PTHR13952:SF22	SUBFAMILY NOT NAMED	coord: 154..198
None	No IPR available	PANTHER	PTHR13952:SF22	SUBFAMILY NOT NAMED	coord: 264..437 coord: 1..125
IPR034143	snRNP70, RNA recognition motif	CDD	cd12236	RRM_snRNP70	coord: 164..327 e-value: 3.0265E-45 score: 153.556
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 151..199
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 264..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16041-RA	Carg16041-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005685	U1 snRNP
cellular_component	GO:0071004	U2-type prespliceosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0030619	U1 snRNA binding
molecular_function	GO:0003676	nucleic acid binding