Carg00549 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00549
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	S-acyltransferase
Location	Carg_Chr03: 5565144 .. 5566662 (-)
RNA-Seq Expression	Carg00549
Synteny	Carg00549

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAAGTCTCACTTTCTCTTCTTCGATGGTAATTTCGGAGTAAACTGCGACAAAACTCTACGCCCCAAACGCCGATGTAAAATTCCCCCATTTCTTCATGGTTTGAAGATGATCATGGATGCTTGCCACCACCGCGACTTCTCGGATCGAATAATGGACCGATACATTCGTTTTTTTCCTTGTCTTTCCGATCCTGGTACGTATTAGAACCTTTTCCCCTTTGAATCCTTCATTTTAGACTCTGGGAAGTGAGATGGGAACTGAGTAATGGATGCAGGTTGTTTTCGCTTTTCCTCATGTTTTTATGCGGTTTGGCTTCACTAATTTACATTGCCTTGTCTGAATTTTAGTTGAACTTGAGGCTTTCGTCGTTTGTCTGATGGCTGTTTCGTTTTTTTTTTTTAATCGTTACCGTTGTGTTTTTCGTGTGGATTTTAATTATGTGGGAAGTGGGTTTCAGCTAGGAGATCTTCGTTGGGTTTAAAAGTAGCATTGGTGATGCTGCACCTTGTTTATGCTGGAGTTCTATTTGCACTCGACCGGCATTTGATTGAAGAAATCAAGATTAAACCATGGTATGTTGTTGTTTGGTTTTGGTTTGGGTCTCTAAGTTCGAAAAAATTGGGTTAGCTACTACGTTTTCTTCTGGAAGTTCTCTAAGATTATTCTGGCCGCCATGTTTATTTTGTGACTTTAAGCTATCTACTACCTGTCAACTTTAGCTTTTATGTGCATCAATTGAATGGCATTATCTTTCGATGTGAAGTTTAGTTGGGTTCTCAGAGTGGAAAACGCAAAATTTAAAGAGTTGATACTTTTATATTTCCTCCAAAAGAAAGAAGGACTAAGAGTATGCTTCAATATACTTTCACCTTGACGAATCTTTCACGGTTGTTAAATCATACAAAGTTCGGAGTCATGAAATCTATGACTTCTAAGATGTTAGAATATGCGACTACTTGTCTCGTGTGTAGGTTATAACATGATATGGGTCTCAAAACAGGGGTGTTAAGACTATTACACGAGTTCTTTCTGCTGTCTTCTTTTTGTAAATTAATATGTAGAAAGTAATCAAGAGCCTTGCAAAAAGATATTGCAACATATCGGGAGAGGCCTTGGGGCATTTGCTAGTGTGTGTTCCGGTCTTAATCTATGGTAGCTAGTGATAGTGTACGGGTCATTTTGGTTACTATGCATAATAGCTTCCTGTAACTGTTCCTATCTTAAAAGGTTTCCAACATCTTTTTTTTTTTCCTTCATAATTCTCAGGTATACGGCTTCATATTTGTTGCTTTTCGTTGCTACCCTCATTCAATACTTTTTAACATCATGTTCATCTCCTGGGTAAAGGCCACTATCTTGTGTTTCCTTGGCATCTCTTTTTATATAACTATATTTCACTTTCCAGGAGAATTTAACTACTTTTTTCTTCCTTTGCCCCCTTTTGTTCAGCTATGTACTCGACGCCATGAGGGCTGCTAATGAAAAAGATATTGCTTTTAGTAAGGCATCAAAGTAA

mRNA sequence

TTCAAGTCTCACTTTCTCTTCTTCGATGGTAATTTCGGAGTAAACTGCGACAAAACTCTACGCCCCAAACGCCGATGTAAAATTCCCCCATTTCTTCATGGTTTGAAGATGATCATGGATGCTTGCCACCACCGCGACTTCTCGGATCGAATAATGGACCGATACATTCGTTTTTTTCCTTGTCTTTCCGATCCTGCTAGGAGATCTTCGTTGGGTTTAAAAGTAGCATTGGTGATGCTGCACCTTGTTTATGCTGGAGTTCTATTTGCACTCGACCGGCATTTGATTGAAGAAATCAAGATTAAACCATGGTATACGGCTTCATATTTGTTGCTTTTCGTTGCTACCCTCATTCAATACTTTTTAACATCATGTTCATCTCCTGGCTATGTACTCGACGCCATGAGGGCTGCTAATGAAAAAGATATTGCTTTTAGTAAGGCATCAAAGTAA

Coding sequence (CDS)

TTCAAGTCTCACTTTCTCTTCTTCGATGGTAATTTCGGAGTAAACTGCGACAAAACTCTACGCCCCAAACGCCGATGTAAAATTCCCCCATTTCTTCATGGTTTGAAGATGATCATGGATGCTTGCCACCACCGCGACTTCTCGGATCGAATAATGGACCGATACATTCGTTTTTTTCCTTGTCTTTCCGATCCTGCTAGGAGATCTTCGTTGGGTTTAAAAGTAGCATTGGTGATGCTGCACCTTGTTTATGCTGGAGTTCTATTTGCACTCGACCGGCATTTGATTGAAGAAATCAAGATTAAACCATGGTATACGGCTTCATATTTGTTGCTTTTCGTTGCTACCCTCATTCAATACTTTTTAACATCATGTTCATCTCCTGGCTATGTACTCGACGCCATGAGGGCTGCTAATGAAAAAGATATTGCTTTTAGTAAGGCATCAAAGTAA

Protein sequence

FKSHFLFFDGNFGVNCDKTLRPKRRCKIPPFLHGLKMIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLIEEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK

Homology

[Close]

BLAST of Carg00549 vs. NCBI nr
Match: KAG7034051.1 (Protein S-acyltransferase 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.8 bits (795), Expect = 6.2e-81
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   FKSHFLFFDGNFGVNCDKTLRPKRRCKIPPFLHGLKMIMDACHHRDFSDRIMDRYIRFFP 60
           FKSHFLFFDGNFGVNCDKTLRPKRRCKIPPFLHGLKMIMDACHHRDFSDRIMDRYIRFFP
Sbjct: 1   FKSHFLFFDGNFGVNCDKTLRPKRRCKIPPFLHGLKMIMDACHHRDFSDRIMDRYIRFFP 60

Query: 61  CLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLIEEIKIKPWYTASYLLLFVATLIQY 120
           CLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLIEEIKIKPWYTASYLLLFVATLIQY
Sbjct: 61  CLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLIEEIKIKPWYTASYLLLFVATLIQY 120

Query: 121 FLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           FLTSCSSPGYVLDAMRAANEKDIAFSKASK
Sbjct: 121 FLTSCSSPGYVLDAMRAANEKDIAFSKASK 150

[Close]

BLAST of Carg00549 vs. NCBI nr
Match: XP_022950276.1 (protein S-acyltransferase 10-like [Cucurbita moschata])

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-56
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 37  MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI 96
           MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI
Sbjct: 1   MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI 60

Query: 97  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK
Sbjct: 61  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 114

[Close]

BLAST of Carg00549 vs. NCBI nr
Match: KAG6603873.1 (Protein S-acyltransferase 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 39  MDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLIEE 98
           MDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLIEE
Sbjct: 1   MDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLIEE 60

Query: 99  IKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           IKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK
Sbjct: 61  IKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 112

[Close]

BLAST of Carg00549 vs. NCBI nr
Match: XP_023544300.1 (protein S-acyltransferase 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.9 bits (572), Expect = 4.5e-55
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 37  MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI 96
           MIMDAC+HRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI
Sbjct: 1   MIMDACYHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI 60

Query: 97  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAF KASK
Sbjct: 61  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFIKASK 114

[Close]

BLAST of Carg00549 vs. NCBI nr
Match: XP_022977303.1 (protein S-acyltransferase 10-like [Cucurbita maxima])

HSP 1 Score: 224.2 bits (570), Expect = 7.7e-55
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 37  MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI 96
           MIMDACH RDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDR+LI
Sbjct: 1   MIMDACHQRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRYLI 60

Query: 97  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK
Sbjct: 61  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 114

[Close]

BLAST of Carg00549 vs. ExPASy Swiss-Prot
Match: Q7XA86 (Protein S-acyltransferase 10 OS=Arabidopsis thaliana OX=3702 GN=PAT10 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-23
Identity = 57/101 (56.44%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 49  DRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLIEEIKIKPWYTAS 108
           DR  D+ +   PCLSDP RRSSL LK+ALV LHLV+ G LF  D   IE+ K  PWY   
Sbjct: 12  DRARDQCLLNLPCLSDPVRRSSLLLKLALVALHLVFIGFLFLFDAEFIEKTKRDPWYMGC 71

Query: 109 YLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKAS 150
           Y+LLF ATL+QYF+TS SSPGYV+DAMR   E    +   S
Sbjct: 72  YILLFSATLLQYFVTSGSSPGYVVDAMRDVCEASAMYRNPS 112

[Close]

BLAST of Carg00549 vs. ExPASy TrEMBL
Match: A0A6J1GEE1 (S-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111453409 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 8.8e-57
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 37  MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI 96
           MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI
Sbjct: 1   MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI 60

Query: 97  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK
Sbjct: 61  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 114

[Close]

BLAST of Carg00549 vs. ExPASy TrEMBL
Match: A0A6J1IPK7 (S-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111477665 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 37  MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI 96
           MIMDACH RDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDR+LI
Sbjct: 1   MIMDACHQRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRYLI 60

Query: 97  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK
Sbjct: 61  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 114

[Close]

BLAST of Carg00549 vs. ExPASy TrEMBL
Match: A0A5D3CL12 (S-acyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00790 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50
Identity = 103/116 (88.79%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 35  LKMIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRH 94
           LKMI+D C  RDF DRIMDRYIRFFPCLSDP RRSSLGLKVALVMLHLVYAG+LFA DRH
Sbjct: 3   LKMIVDVCRPRDFLDRIMDRYIRFFPCLSDPVRRSSLGLKVALVMLHLVYAGILFAFDRH 62

Query: 95  LIEEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           LIEE KIKPWYTASY LLFVATLIQYF+TSCSSPGYVLDAMRAANEKD AF KASK
Sbjct: 63  LIEEAKIKPWYTASYFLLFVATLIQYFVTSCSSPGYVLDAMRAANEKDNAFRKASK 118

[Close]

BLAST of Carg00549 vs. ExPASy TrEMBL
Match: A0A1S3B260 (S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103485175 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50
Identity = 103/116 (88.79%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 35  LKMIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRH 94
           LKMI+D C  RDF DRIMDRYIRFFPCLSDP RRSSLGLKVALVMLHLVYAG+LFA DRH
Sbjct: 3   LKMIVDVCRPRDFLDRIMDRYIRFFPCLSDPVRRSSLGLKVALVMLHLVYAGILFAFDRH 62

Query: 95  LIEEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           LIEE KIKPWYTASY LLFVATLIQYF+TSCSSPGYVLDAMRAANEKD AF KASK
Sbjct: 63  LIEEAKIKPWYTASYFLLFVATLIQYFVTSCSSPGYVLDAMRAANEKDNAFRKASK 118

[Close]

BLAST of Carg00549 vs. ExPASy TrEMBL
Match: A0A6J1BVQ2 (S-acyltransferase OS=Momordica charantia OX=3673 GN=LOC111005792 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 103/114 (90.35%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 37  MIMDACHHRDFSDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLI 96
           MIMD C  RDF DRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFA D +LI
Sbjct: 1   MIMDVCRPRDFLDRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFAFDGNLI 60

Query: 97  EEIKIKPWYTASYLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKASK 151
           EE KIKPWYTASYLLLFVATLIQYF+TSCSSPGYVLDAMRAANEK+IAF KASK
Sbjct: 61  EETKIKPWYTASYLLLFVATLIQYFITSCSSPGYVLDAMRAANEKNIAFKKASK 114

[Close]

BLAST of Carg00549 vs. TAIR 10
Match: AT3G51390.1 (DHHC-type zinc finger family protein )

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 57/101 (56.44%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 49  DRIMDRYIRFFPCLSDPARRSSLGLKVALVMLHLVYAGVLFALDRHLIEEIKIKPWYTAS 108
           DR  D+ +   PCLSDP RRSSL LK+ALV LHLV+ G LF  D   IE+ K  PWY   
Sbjct: 12  DRARDQCLLNLPCLSDPVRRSSLLLKLALVALHLVFIGFLFLFDAEFIEKTKRDPWYMGC 71

Query: 109 YLLLFVATLIQYFLTSCSSPGYVLDAMRAANEKDIAFSKAS 150
           Y+LLF ATL+QYF+TS SSPGYV+DAMR   E    +   S
Sbjct: 72  YILLFSATLLQYFVTSGSSPGYVVDAMRDVCEASAMYRNPS 112

The following BLAST results are available for this feature:

BLAST of Carg00549 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034051.1	6.2e-81	100.00	Protein S-acyltransferase 10, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022950276.1	1.8e-56	100.00	protein S-acyltransferase 10-like [Cucurbita moschata]	[more]
KAG6603873.1	2.0e-55	100.00	Protein S-acyltransferase 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023544300.1	4.5e-55	98.25	protein S-acyltransferase 10-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977303.1	7.7e-55	98.25	protein S-acyltransferase 10-like [Cucurbita maxima]	[more]

BLAST of Carg00549 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA86	3.6e-23	56.44	Protein S-acyltransferase 10 OS=Arabidopsis thaliana OX=3702 GN=PAT10 PE=1 SV=1	[more]

BLAST of Carg00549 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEE1	8.8e-57	100.00	S-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111453409 PE=3 SV=1	[more]
A0A6J1IPK7	3.7e-55	98.25	S-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111477665 PE=3 SV=1	[more]
A0A5D3CL12	2.8e-50	88.79	S-acyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00...	[more]
A0A1S3B260	2.8e-50	88.79	S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103485175 PE=3 SV=1	[more]
A0A6J1BVQ2	1.4e-49	90.35	S-acyltransferase OS=Momordica charantia OX=3673 GN=LOC111005792 PE=3 SV=1	[more]

BLAST of Carg00549 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51390.1	2.6e-24	56.44	DHHC-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22883:SF307	S-ACYLTRANSFERASE	coord: 61..142
None	No IPR available	PANTHER	PTHR22883	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	coord: 61..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00549-RA	Carg00549-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018230	peptidyl-L-cysteine S-palmitoylation
biological_process	GO:0099402	plant organ development
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009705	plant-type vacuole membrane
molecular_function	GO:0019706	protein-cysteine S-palmitoyltransferase activity