Carg08816 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGATCAAAGGAAGAAAGACAAACTGAGCCAAAAGCCAGAGTTCCATTGCAACTGGCCTCGGCTTCATCGTCTCATTCAGAAATCTCCAAATTGTTCCTTTGTTGGAAACGAAAATCAGAGATCTCTGCGGATATGGCACCGACGTCAGCTCTGGCGAAGTACAAGCTGGTCTTTCTCGGAGACCAGTCTGTTGGAAAAACCAGTATCATTACACGCTTCATGTACGACAAATTCGATAATACGTATCAGGTAATTCCCGGATGAATCGTCAATTGTGTAGATCCTTGTTTGTATCACACGTCGGGGTCGGATCGGTTCGGAAACTGTTACTGAATGCCTGATTCTGTTGGTTTCATCTTTAATTTTGGTTTATCTTGTTTCTGTCTGCAGTTTTCTTTGATTGTATTTGGCTCTCTGTCTTGTCGCTTCTGGTTGTGTCTTTGAGGAGGATCAGAACTCGATGTTTTAGTTTTTAGATCCTTTTGATTTTTATTCATATGCGATCAGCATTATCTTTGCTCAGTGTGTATTTGTTTGAATATATTTGTTCTTAGTCAAGAATTCAGTCATTTAGCAAATTTTTAAGTCTGTCACCTTGCTGATTCCGGGTGAATGATGTTCAGATTTTACAGCTGTTTGTTGTCAGCAGCTTTAGTCTGTACTGTAGTGCTTGAATACTGAGTACGCCTTGCAAAATTGAATCGAAATGAGGAGAAGGGCGGATTTTCTTTGATGCTCCTCTTTCAGCTAAATCGAATTTAGATCGTTATCCTGGAATCTTGCTAACTTTTGTGGAATGAAAAGCTTTTTGGTTTTTACTTCCCCGATTATACTTTGTTGGATTGTTAGAAGAATATGTTGGCTGACTTTGTACGATAAGTAACCACTGTTATACGACCTCGCATGTCAAATTTGTAGTCGTCTCATGGAGTTGAGTGGGCATTATTAATAATTCAACTGCTAACTCGATAGTGCAATTATGTGTTCTATGTATGTTAAAGGTGCTTTGATTGGACTTTTGGGACATTTTTGTCATTGCCTCTAAAAAGAGCAGGATGTATAGAGAAAACAGATAAACAGTGATTGATGTCCAGTGGATATCTAGGTTGTCCTCCTGATTAGTTTTTAAGTTGTTAAGAACTATGAAGATACTCGATTCATTATTTTTTATGGTACGTTAGTATTATTTTTAAAAAAATTACTTGGATGTTGTTCTTTTCAGTGCATCAATTGGAGCTTTTTGTGATTATTCTTTTTTAGTCTTGACCGAATAGAGAGGTTTCGTAATTACTTCTTGATTGTATGAATGCACCCTTGTAGATAGATACTTCCATGTCTCTTAATCTTTGTTTTTTTTTTCCTTCTTTTTCTTTGTAATTTCTGTTGAATACTAGTTCTTTTGAAATTTCAGTTTCAAATTCATACCCCATATTCGCTTCTTGCAATATATTAATGTCTATGCCTTTGTTCAGGCTACAATCGGTATCGATTTTCTCTCAAAAACTATGTATCTCGAAGATCGCACTGTTCGACTGCAGTTGTGGTAAGATTCATTAAATCACATTTTGTGCTTGTATATTAAGCACGTGCTTTGTTTGTCCTATAAATTAAGAACTTGTATGATTTACTTGCATGAGTCCATGACCTGAATGATAGATTTCAACAACATGAAAACATTATGATTAACCCAAGAAAGCTATTTCTCCTGATTAAATCTCTTCTCTTTGGAAATTTGAAAACAAATTCCAAGGTACATCCCCTTGAGGGGGAAACCTGAAAGTTCTGCATTTGGAATTCCTTTCTGAAGTAAAATTCTAAAAAATATTTGAACTGGTATGCCGCTCCTTTATATAGAGGTGAGAGGCTCATTTTCTGCGGGGCAGCCACCATATTGGATGCAATGCGGCTTCTCTCCTGCTTAACCGATGTCTAAATAAAAGCTCCTATAAAACTCATCCCCATCAAAAACAATTTGCTGAACAAATGGGGAGTCGTTCCATTAGAGTTTCGTGACTCCTTCTCGAGCCTCTGTCTCGCTAATATTTTCTATCATCATTCTTTCTTTCTGAACATGGCCAATTGGAGAGCTATTATTTTTTTAAGAAATTTTCCTAGGCCTGGCTTTGTGCCTTTCAAATCTACTTCCACTCAAGGTCGAAAGGAGATACAGAAAAGCTCTTGAAGAATTAACAAATACAGACTTTGGGCAACTAGACAAGGAACTAATTAGCTTCTTTAGGAACTTCATCTAGAAGCTAGGTAACAATCAATATTTAATAGATCTCTGCCATCTCTACATTTTCCTTCAAATAAAAAATAATGTTACAGGTGCCCTAATTAAATTTGTTCTTTGTCTGATGAGCATGCAGATCTTGTAAATTAATGCATTACTTTTGACTTCTGTGCACTTGTATTTATGATACGTATAATTCCATTTAATTGGAGCGATCAACTGTCTTTAATTGTCTTTCCCAGAAATATGGGTTTTGCTGCACATTAATTTTTTTTTTTTTATTACTTTGTTTCTCAGGGACACTGCTGGACAGGAAAGATTCAGAAGTTTAATACCAAGCTATATCAGGGACTCATCTGTCGCGGTCATCGTTTATGATGTTGCAAGTATGGATTCTGAAACTTTCTATAAAATGAGAATAATTAAGCAAAGAAAACCACTTGAATATGTGTATTCTGTCCATGTGGATTTGTCATTTGATGTTGTGGTAAAATGAAATGATTTATAAACTCCTGGGTGGATCTGGGTTCTGATATCTGAGCTTTTTAGGTTCTTAAAATCATATAGTTACTTGATTACATGCTGCGGAGTAATTTCTGTGCCATGATATGCTCAAAGGATTGTTTTTTACTGTTTTCACCCTTTTGCTACTTAGGCCGGCAGACTTTCGTAAACACTTCGAAATGGATTGAGGAGGTGCGCACTGAGAGGGGCAGTGATGTTATTATAGTGCTTGTTGGGAACAAAACGGACCTTGTGGAGAAGAGGTAATATTTGGCTATGTATTTTATTTCATATTAAATGTTCAAATCTTTCCACTATATTGTTCAACTCAAATGTTCATGTTGAGTCTTTCCTCTATATTGTTCAACTCAAATGTTCATGTTTAGTCTTTCCTCTGTTGTAATGTCGAGGTGTTCGTTTATCTCTATCGTATGGTCTTATGTTTATTGTGTTGCGTGGGGCGAAAAAGTACATAGTGTTTATATGGCACAGGATATTATGGTCCACCGCTGTTCTTGCTCCTATATTTTCTAAGGGAAAATAGGTTTTAATTTTAATAAGCCTTTTCTTTTACATTCCCAAGAAGTTTAGTCTTGTTTGGCATATTGTTTCACCATCTTCTCCTACGCATGATTCACAGGCAAGTCTCCGTAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCAAAAGCTGGATTCAATATCAAGGTAAACCAATATGAAAATGTATCCATACTCGGATACCTCCAGATTGAATCTAATACCAATCAATGCTTCTCATCTGCCGTATACTCGGGAACTTGAAGCAAATACTTATAATTCCTTCATTCTTTGATAAAGATTTAAATTGAACTTTAGAAAGGCCGCTATTTTCTTAGCATCTGCTTATGGTCTTTCTAATGGCCATATTGCCAACCCTATAATTTATGCAGGCACTATTCCGAAAAATTGCTGCAGCATTGCCCGGAATGGAAACTCTCTCTTCGACAAAGCAAGAAGACATGGTTGATGTCAACCTGAAGTCATCAGGCAGTGGTGCTGCACAATCCCAGCCGCAGTCCGGTGGATGCGCCTGCTAGTGAAGCTCGACATTGAGGAATCGCTCGCTCTTTCTTGCCTTTTGTTTTCAACACCTCAATCTTCTAGAACTGTGGCATTCAGGTACAAGGTGTGGTTATATCTATCAATGCCTGCTTGAGCAATTCGTAAAATGTAATAGGTGGCAAGAGTAGACGGCTGTTATTTTATGGAGTAATTTGATGTATTGGTGGAGTCATTATTTGGGTTTTGGGATTTGGGAGATGTGTAAAAATTAGAAAATTTATCTGTCGGACTCGATTACAGAATTTTGCTTGTCTTGTAAGTTGTAATTCATCTTTAGAAATTCTGCAAATTTCATTTGCTTTTACAATGATTTGTTGAGTTGGTTCATATCATGCTTTTGGTTTACAAATTGGCATCTTATTTTAGCTTTATTATAGTTGCTTGGGAAGTTACTCAAAATTCTCTATTATTTCGTTCTCGTAAAACTGATTCGCATTCAATTTTTATGAAGAGACTACAATAATCATCTATTACTTTCTGATCATATGTAAAATTTATTGTATCAATATTGAAATGTCAACCTTCATATGCTAAATTTAGTAATATATGTATAAACATTAAACCTGTTGCTCAAATCCAAAATTCGTATCAGTGCGAGCATTCGCTAAGATAACCTTCTAACCTTTAATTATAATCGTTCCCACACATAATCAAATATTAGATCGACGCTTGTTGCAGGATTCCTTCCCTATCAAACACAGTAAAAGAGGAAAGTAAACCAACATTTGAAACTGGGCTTGGAGGGGTGCGCCAGGCCCATGCTATAGTGCAACGCAAGGGCGACGCTCGA AGATCAAAGGAAGAAAGACAAACTGAGCCAAAAGCCAGAGTTCCATTGCAACTGGCCTCGGCTTCATCGTCTCATTCAGAAATCTCCAAATTGTTCCTTTGTTGGAAACGAAAATCAGAGATCTCTGCGGATATGGCACCGACGTCAGCTCTGGCGAAGTACAAGCTGGTCTTTCTCGGAGACCAGTCTGTTGGAAAAACCAGTATCATTACACGCTTCATGTACGACAAATTCGATAATACGTATCAGGCTACAATCGGTATCGATTTTCTCTCAAAAACTATGTATCTCGAAGATCGCACTGTTCGACTGCAGTTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTTTAATACCAAGCTATATCAGGGACTCATCTGTCGCGGTCATCGTTTATGATGTTGCAAGCCGGCAGACTTTCGTAAACACTTCGAAATGGATTGAGGAGGTGCGCACTGAGAGGGGCAGTGATGTTATTATAGTGCTTGTTGGGAACAAAACGGACCTTGTGGAGAAGAGGCAAGTCTCCGTAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCAAAAGCTGGATTCAATATCAAGGCACTATTCCGAAAAATTGCTGCAGCATTGCCCGGAATGGAAACTCTCTCTTCGACAAAGCAAGAAGACATGGTTGATGTCAACCTGAAGTCATCAGGCAGTGGTGCTGCACAATCCCAGCCGCAGTCCGGTGGATGCGCCTGCTAGTGAAGCTCGACATTGAGGAATCGCTCGCTCTTTCTTGCCTTTTGTTTTCAACACCTCAATCTTCTAGAACTGTGGCATTCAGGTACAAGGTGTGGTTATATCTATCAATGCCTGCTTGAGCAATTCGTAAAATGTAATAGGTGGCAAGAGTAGACGGCTGTTATTTTATGGAGTAATTTGATGTATTGGTGGAGTCATTATTTGGGTTTTGGGATTTGGGAGATGTGTAAAAATTAGAAAATTTATCTGTCGGACTCGATTACAGAATTTTGCTTGTCTTGTAAGTTGTAATTCATCTTTAGAAATTCTGCAAATTTCATTTGCTTTTACAATGATTTGTTGAGTTGGTTCATATCATGCTTTTGGTTTACAAATTGGCATCTTATTTTAGCTTTATTATAGTTGCTTGGGAAGTTACTCAAAATTCTCTATTATTTCGTTCTCGTAAAACTGATTCGCATTCAATTTTTATGAAGAGACTACAATAATCATCTATTACTTTCTGATCATATGTAAAATTTATTGTATCAATATTGAAATGTCAACCTTCATATGCTAAATTTAGTAATATATGTATAAACATTAAACCTGTTGCTCAAATCCAAAATTCGTATCAGTGCGAGCATTCGCTAAGATAACCTTCTAACCTTTAATTATAATCGTTCCCACACATAATCAAATATTAGATCGACGCTTGTTGCAGGATTCCTTCCCTATCAAACACAGTAAAAGAGGAAAGTAAACCAACATTTGAAACTGGGCTTGGAGGGGTGCGCCAGGCCCATGCTATAGTGCAACGCAAGGGCGACGCTCGA AGATCAAAGGAAGAAAGACAAACTGAGCCAAAAGCCAGAGTTCCATTGCAACTGGCCTCGGCTTCATCGTCTCATTCAGAAATCTCCAAATTGTTCCTTTGTTGGAAACGAAAATCAGAGATCTCTGCGGATATGGCACCGACGTCAGCTCTGGCGAAGTACAAGCTGGTCTTTCTCGGAGACCAGTCTGTTGGAAAAACCAGTATCATTACACGCTTCATGTACGACAAATTCGATAATACGTATCAGGCTACAATCGGTATCGATTTTCTCTCAAAAACTATGTATCTCGAAGATCGCACTGTTCGACTGCAGTTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTTTAATACCAAGCTATATCAGGGACTCATCTGTCGCGGTCATCGTTTATGATGTTGCAAGCCGGCAGACTTTCGTAAACACTTCGAAATGGATTGAGGAGGTGCGCACTGAGAGGGGCAGTGATGTTATTATAGTGCTTGTTGGGAACAAAACGGACCTTGTGGAGAAGAGGCAAGTCTCCGTAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCAAAAGCTGGATTCAATATCAAGGCACTATTCCGAAAAATTGCTGCAGCATTGCCCGGAATGGAAACTCTCTCTTCGACAAAGCAAGAAGACATGGTTGATGTCAACCTGAAGTCATCAGGCAGTGGTGCTGCACAATCCCAGCCGCAGTCCGGTGGATGCGCCTGCTAG RSKEERQTEPKARVPLQLASASSSHSEISKLFLCWKRKSEISADMAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSGSGAAQSQPQSGGCAC Homology
BLAST of Carg08816 vs. NCBI nr
Match: KAG7036170.1 (Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 477.6 bits (1228), Expect = 6.5e-131 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of Carg08816 vs. NCBI nr
Match: XP_022958673.1 (ras-related protein RABH1b [Cucurbita moschata] >XP_023533385.1 ras-related protein RABH1b [Cucurbita pepo subsp. pepo] >KAG6606223.1 Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 397.5 bits (1020), Expect = 8.5e-107 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Carg08816 vs. NCBI nr
Match: XP_022996115.1 (ras-related protein RABH1b [Cucurbita maxima]) HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-106 Identity = 207/208 (99.52%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Carg08816 vs. NCBI nr
Match: XP_038889006.1 (ras-related protein RABH1b [Benincasa hispida]) HSP 1 Score: 394.8 bits (1013), Expect = 5.5e-106 Identity = 205/208 (98.56%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Carg08816 vs. NCBI nr
Match: XP_022159735.1 (ras-related protein RABH1b [Momordica charantia]) HSP 1 Score: 394.0 bits (1011), Expect = 9.4e-106 Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy Swiss-Prot
Match: O80501 (Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 8.6e-102 Identity = 191/208 (91.83%), Postives = 202/208 (97.12%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy Swiss-Prot
Match: Q9LFT9 (Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.6e-95 Identity = 183/208 (87.98%), Postives = 195/208 (93.75%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy Swiss-Prot
Match: Q9SID8 (Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 3.4e-90 Identity = 173/208 (83.17%), Postives = 186/208 (89.42%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy Swiss-Prot
Match: Q9SMR4 (Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 3.1e-83 Identity = 166/215 (77.21%), Postives = 187/215 (86.98%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy Swiss-Prot
Match: P20340 (Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3) HSP 1 Score: 302.4 bits (773), Expect = 4.9e-81 Identity = 152/203 (74.88%), Postives = 177/203 (87.19%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy TrEMBL
Match: A0A6J1H3Q8 (ras-related protein RABH1b OS=Cucurbita moschata OX=3662 GN=LOC111459827 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 4.1e-107 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy TrEMBL
Match: A0A6J1K5U1 (ras-related protein RABH1b OS=Cucurbita maxima OX=3661 GN=LOC111491433 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 9.2e-107 Identity = 207/208 (99.52%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy TrEMBL
Match: A0A6J1DZL5 (ras-related protein RABH1b OS=Momordica charantia OX=3673 GN=LOC111026075 PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 4.6e-106 Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy TrEMBL
Match: A0A5A7TB19 (Ras-related protein RABH1b-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004050 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105 Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of Carg08816 vs. ExPASy TrEMBL
Match: A0A0A0LI95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910690 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105 Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of Carg08816 vs. TAIR 10
Match: AT2G44610.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 371.3 bits (952), Expect = 6.1e-103 Identity = 191/208 (91.83%), Postives = 202/208 (97.12%), Query Frame = 0
BLAST of Carg08816 vs. TAIR 10
Match: AT5G10260.1 (RAB GTPase homolog H1E ) HSP 1 Score: 350.5 bits (898), Expect = 1.1e-96 Identity = 183/208 (87.98%), Postives = 195/208 (93.75%), Query Frame = 0
BLAST of Carg08816 vs. TAIR 10
Match: AT2G22290.1 (RAB GTPase homolog H1D ) HSP 1 Score: 332.8 bits (852), Expect = 2.4e-91 Identity = 173/208 (83.17%), Postives = 186/208 (89.42%), Query Frame = 0
BLAST of Carg08816 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C ) HSP 1 Score: 309.7 bits (792), Expect = 2.2e-84 Identity = 166/215 (77.21%), Postives = 187/215 (86.98%), Query Frame = 0
BLAST of Carg08816 vs. TAIR 10
Match: AT5G64990.1 (RAB GTPase homolog H1A ) HSP 1 Score: 286.6 bits (732), Expect = 2.0e-77 Identity = 150/199 (75.38%), Postives = 165/199 (82.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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