Carg17216 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg17216
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpentatricopeptide repeat-containing protein At1g20300, mitochondrial
LocationCarg_Chr01: 13016230 .. 13019222 (+)
RNA-Seq ExpressionCarg17216
SyntenyCarg17216
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTGTTTAAATCGAAGCCAAATCTTCCACCCTTTCTGTCTTCTCTCTCGCCGTTCTTACAGAATCACCGTTTATTTTCATCTTCCACTTCAATTTCCGAGTCTCAACTTCAAGACGAGGACGCGGGCAATACTACTCCGCATGCCTCAAAGCCTGTCCTCTCACCGGAAGAAATCCAGGCCGCCGATAAATTCCATTCCCTAATTAAGGAATACTATCGAAGAAATCCCAGTCCCGATCCCACTCCACCAAGCCCTAACTTCATCATTTCTGCTCTCTCCAACGAACTATCCCAAATCTCACCTGTTCATGCCGTCTCTCCGGCCGTCGTTCGTTACGTCATCGAGAAATCTGGTGGCGTCCGCCATGGCATCCCCTTCCTCCAAGCCCTCGCGTTCTTCAACTGGGCGACGGCAAGCGAGACGTTCGAGCACTCTGCACACCCCTACAACGAGATGATTGACCTAGCCGGTAAGGTGAAACAATTCGGATTAGCGTGGCATTTGATTGATCTGATGAAAGCTAGAAATGTTGAAATTACTGTTGAAACCTTCTCGATTCTTGTCCGGCGGTATGTGAGGGCTGGATTGGCGGCGGAGGCGGTTCATGCGTTTAATCGCATGGAGGACTACGGCTGCAATCCTGACAAGATTGCTTTCACAATTGTTATCAGCATTCTGTGCAAGAAGAGAAGGGCAACTGAAGCCCAGTCATTTTTTGACAATCTGAAACATAAATTTGAACCTGATGTTATTGTTTACACTAACCTGGTCCATGGCTGGTGTCGAGCCGGTGATATCTCAGAGGCCGAGAGGGTGTTTAAAGAGATGAAGATGGCAGGTATTAGCCCTAATGTTTATACTTACAGCATTGTGATTGATGCATTGTGTAGATGTGGCCAAATTACTCGTGCCCATGATGTTTTCTCTGAGATGATCGATGCTGGTTGCAATCCCAACTCAGTTACATTCAATAATCTTATAAGAGTCCACGTGAAAGCTGGTAGAACAGAGAAGGTTTTGCAAGTGTACAATCAAATGAAGAGATTGGGTTGTGCTGCTGACATAATTACTTATAACTTTCTTATTGAGACTCATTGTAAGGATGATAATCTTGGAGAGGCTACAAAGGTCCTCAACTCTATGGCTAAGAAAGGCTGTACCCCGAATGCATCGACCTTTAATCCCATATTTAGGTGTATCGTGAAGTCGCATGATGTAAATGGTGTTCATAGGATGTTTGCTAAGATGAAGGATCTGGGTTGTAAGCCAAATACAGTGACGTACAATATCTTGATGCGGATGTTTGCAGAATCGAAATCTGCTGATATGATTTTCAAGTTGAAGAAGGAGATGGAAGAAGAAGAAGTTGAGCCTAATTTGAATACTTACCAAGTACTGATATCGTTATATTGTGGGATGGGGCATTGGAACAATGCCTACAAGTTTTTCAGGGAAATGATTGAGGAGAAATGCTTAAAGCCCAGCATGCCTATCTATGAGATGGTTCTGCAGCAGCTGCGAAAGGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGATAAGATGGTCGAGAGAGGTTTTGCCTCGCGGCCCCTTTAGAGTAACTGGCTTCTTTTATACTCGAAGTTGTAGTTACGTTGGCGCAAAGTGTCGACCGACACAAGAAGTTAAAAGCCCCCATTTGATAACTATAACTATCACCCAGCAGTTTGTATGGCTGGAGTCATTGCTTTGATTTTGTTAAGATCCTATGTGAATTGGCCTGAGGCTGCCACTTGCGTGGGCTGGGAGAGCTGTCTACAACAGTATTAGAAGGCAAAAGGTTCCTAGATTAGATACTTAAAATTAGGAGGGGGCAAATTACAAGGGGCTGTTTGGTTCTCTTGAACCTCTTCTTAAGCTTCTTTGTTTTGTTCTCTACTAAAACGTAGACCAGGTTTTTGGAATTAAAAGATCTGTTTTTGTTATTGAAATTTTGCAAGGAATTCAATTATTGTTTTCAGAATCCAATCATTTCATCAAGACAATGTTCAACTTTGAGTATCAATATCACACTGAAGTAACAGAGATTTGAAAAGATTACTGAATAATGCCGGTGGTGACAATCTTTCTTAGTTACCCTGCATATCCAACATCTCCTCTAAACGCTTCAATCTCTCTATTCCTTCACTCAGCAGAAACCTTACTTTCCGTCTCTCGTTGCAGCCGCGGTTGTTCTCCATTTCTTGTCTGATTGTATGCCTCAGTTCCTCTGTTCAAAGCAGACAATTTCAAAACTAACGAAATCCGAAATGAAACCAGGGTGAATTCAAATGACATCTGAAGATCATGACAAGAAAAATGCATAGAAAGTGGATGATGTTCGTCATCAAAAGAATACTTCATTGTAAGATCATAATCAAAAGCTTAACCTCGAGCGTGGACAGGAGCTTTTTGAGCAGTTCTTAAAGCATGCCTGTACAGTTTCAACACTCTTGCACGGAGAATAAATTCCTGTAAATCGAGGGAGAGAACCATGGCGAATTCTCCTCCTGTACAACATTTTGTACAATGTTAGATATAGCGGAAGAATTCGACTGTATACAAAATTCTTCCACCAGTAAAATTCCGACGTGGAGAAATTTATAGAACAAATAATCGAAATCTCTTGGCTCTGAAGACTAGTTGGACAAAATGAATATCTTCTAGCAGAATCATATCAAACAAAAGCTAGGGCAAAACGTAAACGTAAATTTCTTCTATAATGTACGGACTTACCTAGAAGACAAATAGATGGTGCTACTTCCAGTTCGTCAAGCCCACTGTGGATCAAACTGAAGTGAATTCCATTTCTGGTTCAATCTGACGTTTACTATTTCTGTTGTTCAGGTCTGAGTTCGAAGGTCATGAAGGAAGACGACGATCTGGAGAAGGACTGGAGTTGGGCCAGTGACTCCAGAAAACTGGGCTTTTCTGGGAAACGATTTGGGCTGAAGCCTGCCCAGTAG

mRNA sequence

ATGGCTCTGTTTAAATCGAAGCCAAATCTTCCACCCTTTCTGTCTTCTCTCTCGCCGTTCTTACAGAATCACCGTTTATTTTCATCTTCCACTTCAATTTCCGAGTCTCAACTTCAAGACGAGGACGCGGGCAATACTACTCCGCATGCCTCAAAGCCTGTCCTCTCACCGGAAGAAATCCAGGCCGCCGATAAATTCCATTCCCTAATTAAGGAATACTATCGAAGAAATCCCAGTCCCGATCCCACTCCACCAAGCCCTAACTTCATCATTTCTGCTCTCTCCAACGAACTATCCCAAATCTCACCTGTTCATGCCGTCTCTCCGGCCGTCGTTCGTTACGTCATCGAGAAATCTGGTGGCGTCCGCCATGGCATCCCCTTCCTCCAAGCCCTCGCGTTCTTCAACTGGGCGACGGCAAGCGAGACGTTCGAGCACTCTGCACACCCCTACAACGAGATGATTGACCTAGCCGGTAAGGTGAAACAATTCGGATTAGCGTGGCATTTGATTGATCTGATGAAAGCTAGAAATGTTGAAATTACTGTTGAAACCTTCTCGATTCTTGTCCGGCGGTATGTGAGGGCTGGATTGGCGGCGGAGGCGGTTCATGCGTTTAATCGCATGGAGGACTACGGCTGCAATCCTGACAAGATTGCTTTCACAATTGTTATCAGCATTCTGTGCAAGAAGAGAAGGGCAACTGAAGCCCAGTCATTTTTTGACAATCTGAAACATAAATTTGAACCTGATGTTATTGTTTACACTAACCTGGTCCATGGCTGGTGTCGAGCCGGTGATATCTCAGAGGCCGAGAGGGTGTTTAAAGAGATGAAGATGGCAGGTATTAGCCCTAATGTTTATACTTACAGCATTGTGATTGATGCATTGTGTAGATGTGGCCAAATTACTCGTGCCCATGATGTTTTCTCTGAGATGATCGATGCTGGTTGCAATCCCAACTCAGTTACATTCAATAATCTTATAAGAGTCCACGTGAAAGCTGGTAGAACAGAGAAGGTTTTGCAAGTGTACAATCAAATGAAGAGATTGGGTTGTGCTGCTGACATAATTACTTATAACTTTCTTATTGAGACTCATTGTAAGGATGATAATCTTGGAGAGGCTACAAAGGTCCTCAACTCTATGGCTAAGAAAGGCTGTACCCCGAATGCATCGACCTTTAATCCCATATTTAGGTGTATCGTGAAGTCGCATGATGTAAATGGTGTTCATAGGATGTTTGCTAAGATGAAGGATCTGGGTTGTAAGCCAAATACAGTGACGTACAATATCTTGATGCGGATGTTTGCAGAATCGAAATCTGCTGATATGATTTTCAAGTTGAAGAAGGAGATGGAAGAAGAAGAAGTTGAGCCTAATTTGAATACTTACCAAGTACTGATATCGTTATATTGTGGGATGGGGCATTGGAACAATGCCTACAAGTTTTTCAGGGAAATGATTGAGGAGAAATGCTTAAAGCCCAGCATGCCTATCTATGAGATGGTTCTGCAGCAGCTGCGAAAGGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGATAAGATGGTCGAGAGAGGTCTGAGTTCGAAGGTCATGAAGGAAGACGACGATCTGGAGAAGGACTGGAGTTGGGCCAGTGACTCCAGAAAACTGGGCTTTTCTGGGAAACGATTTGGGCTGAAGCCTGCCCAGTAG

Coding sequence (CDS)

ATGGCTCTGTTTAAATCGAAGCCAAATCTTCCACCCTTTCTGTCTTCTCTCTCGCCGTTCTTACAGAATCACCGTTTATTTTCATCTTCCACTTCAATTTCCGAGTCTCAACTTCAAGACGAGGACGCGGGCAATACTACTCCGCATGCCTCAAAGCCTGTCCTCTCACCGGAAGAAATCCAGGCCGCCGATAAATTCCATTCCCTAATTAAGGAATACTATCGAAGAAATCCCAGTCCCGATCCCACTCCACCAAGCCCTAACTTCATCATTTCTGCTCTCTCCAACGAACTATCCCAAATCTCACCTGTTCATGCCGTCTCTCCGGCCGTCGTTCGTTACGTCATCGAGAAATCTGGTGGCGTCCGCCATGGCATCCCCTTCCTCCAAGCCCTCGCGTTCTTCAACTGGGCGACGGCAAGCGAGACGTTCGAGCACTCTGCACACCCCTACAACGAGATGATTGACCTAGCCGGTAAGGTGAAACAATTCGGATTAGCGTGGCATTTGATTGATCTGATGAAAGCTAGAAATGTTGAAATTACTGTTGAAACCTTCTCGATTCTTGTCCGGCGGTATGTGAGGGCTGGATTGGCGGCGGAGGCGGTTCATGCGTTTAATCGCATGGAGGACTACGGCTGCAATCCTGACAAGATTGCTTTCACAATTGTTATCAGCATTCTGTGCAAGAAGAGAAGGGCAACTGAAGCCCAGTCATTTTTTGACAATCTGAAACATAAATTTGAACCTGATGTTATTGTTTACACTAACCTGGTCCATGGCTGGTGTCGAGCCGGTGATATCTCAGAGGCCGAGAGGGTGTTTAAAGAGATGAAGATGGCAGGTATTAGCCCTAATGTTTATACTTACAGCATTGTGATTGATGCATTGTGTAGATGTGGCCAAATTACTCGTGCCCATGATGTTTTCTCTGAGATGATCGATGCTGGTTGCAATCCCAACTCAGTTACATTCAATAATCTTATAAGAGTCCACGTGAAAGCTGGTAGAACAGAGAAGGTTTTGCAAGTGTACAATCAAATGAAGAGATTGGGTTGTGCTGCTGACATAATTACTTATAACTTTCTTATTGAGACTCATTGTAAGGATGATAATCTTGGAGAGGCTACAAAGGTCCTCAACTCTATGGCTAAGAAAGGCTGTACCCCGAATGCATCGACCTTTAATCCCATATTTAGGTGTATCGTGAAGTCGCATGATGTAAATGGTGTTCATAGGATGTTTGCTAAGATGAAGGATCTGGGTTGTAAGCCAAATACAGTGACGTACAATATCTTGATGCGGATGTTTGCAGAATCGAAATCTGCTGATATGATTTTCAAGTTGAAGAAGGAGATGGAAGAAGAAGAAGTTGAGCCTAATTTGAATACTTACCAAGTACTGATATCGTTATATTGTGGGATGGGGCATTGGAACAATGCCTACAAGTTTTTCAGGGAAATGATTGAGGAGAAATGCTTAAAGCCCAGCATGCCTATCTATGAGATGGTTCTGCAGCAGCTGCGAAAGGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGATAAGATGGTCGAGAGAGGTCTGAGTTCGAAGGTCATGAAGGAAGACGACGATCTGGAGAAGGACTGGAGTTGGGCCAGTGACTCCAGAAAACTGGGCTTTTCTGGGAAACGATTTGGGCTGAAGCCTGCCCAGTAG

Protein sequence

MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEIQAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSGGVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSFFDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRCGQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITYNFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKDLGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNNAYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSKVMKEDDDLEKDWSWASDSRKLGFSGKRFGLKPAQ
Homology
[Close]
BLAST of Carg17216 vs. NCBI nr
Match: KAG7037929.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1146.0 bits (2963), Expect = 0.0e+00
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60
           MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI
Sbjct: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60

Query: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120
           QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG
Sbjct: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120

Query: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180
           GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE
Sbjct: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180

Query: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240
           ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300
           FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC
Sbjct: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300

Query: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360
           GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY
Sbjct: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360

Query: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420
           NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD
Sbjct: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420

Query: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480
           LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN
Sbjct: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480

Query: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSKVMKEDDDL 540
           AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSKVMKEDDDL
Sbjct: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSKVMKEDDDL 540

Query: 541 EKDWSWASDSRKLGFSGKRFGLKPAQ 567
           EKDWSWASDSRKLGFSGKRFGLKPAQ
Sbjct: 541 EKDWSWASDSRKLGFSGKRFGLKPAQ 566

[Close]
BLAST of Carg17216 vs. NCBI nr
Match: KAG6608612.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1072.8 bits (2773), Expect = 8.7e-310
Identity = 529/532 (99.44%), Postives = 531/532 (99.81%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60
           MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI
Sbjct: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60

Query: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120
           QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG
Sbjct: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120

Query: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180
           GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE
Sbjct: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180

Query: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240
           ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300
           FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC
Sbjct: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300

Query: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360
           GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY
Sbjct: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360

Query: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420
           NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD
Sbjct: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420

Query: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480
           LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN
Sbjct: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480

Query: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERG +S+
Sbjct: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGFASR 532

[Close]
BLAST of Carg17216 vs. NCBI nr
Match: XP_022941057.1 (pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1058.1 bits (2735), Expect = 2.6e-305
Identity = 523/532 (98.31%), Postives = 525/532 (98.68%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60
           MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDA NTTP ASKPVL PEEI
Sbjct: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDASNTTPKASKPVLLPEEI 60

Query: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120
           QAADKFHSLIKEYYRRNPSPDPTPPSPNF ISALSNELSQISPVHAVSP VVRYVIEKSG
Sbjct: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFTISALSNELSQISPVHAVSPGVVRYVIEKSG 120

Query: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180
           GVRHGIPFLQALAFFNWATASETFEHSA PYNEMIDLAGKVKQFGLAWHLIDLMKARNVE
Sbjct: 121 GVRHGIPFLQALAFFNWATASETFEHSAQPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180

Query: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240
           ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300
           FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC
Sbjct: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300

Query: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360
           GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY
Sbjct: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360

Query: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420
           NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD
Sbjct: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420

Query: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480
           LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN
Sbjct: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480

Query: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERG +S+
Sbjct: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGFASR 532

[Close]
BLAST of Carg17216 vs. NCBI nr
Match: XP_023524986.1 (pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1048.9 bits (2711), Expect = 1.6e-302
Identity = 520/532 (97.74%), Postives = 522/532 (98.12%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60
           MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQD DA NTTP ASKPVL PEEI
Sbjct: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDNDASNTTPKASKPVLLPEEI 60

Query: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120
           QAADKF SLIKEYYRRNPSPDPTPPSPNF ISALSNELSQISPV  VSPAVVRYVIEKSG
Sbjct: 61  QAADKFLSLIKEYYRRNPSPDPTPPSPNFTISALSNELSQISPVQVVSPAVVRYVIEKSG 120

Query: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180
           GVRHGIPFLQALAFFNWATASETFEHSA PYNEMIDLAGKVKQFGLAWHLIDLMKARNVE
Sbjct: 121 GVRHGIPFLQALAFFNWATASETFEHSAQPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180

Query: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240
           ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300
           FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC
Sbjct: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300

Query: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360
           GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY
Sbjct: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360

Query: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420
           NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD
Sbjct: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420

Query: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480
           LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN
Sbjct: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480

Query: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERG +S+
Sbjct: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGFASR 532

[Close]
BLAST of Carg17216 vs. NCBI nr
Match: XP_022981970.1 (pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1039.6 bits (2687), Expect = 9.6e-300
Identity = 513/532 (96.43%), Postives = 523/532 (98.31%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60
           MALFKSKPNL PFLSSLSPFLQNHRLFSSSTSISESQLQDEDA NTTP+ASKPVL PEEI
Sbjct: 1   MALFKSKPNLSPFLSSLSPFLQNHRLFSSSTSISESQLQDEDASNTTPNASKPVLLPEEI 60

Query: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120
           QAA KFHSLIKEYYRRNPSPDPTPPSPNF ISALSNELSQISPVHAVSPAVVRYVIEKSG
Sbjct: 61  QAAGKFHSLIKEYYRRNPSPDPTPPSPNFTISALSNELSQISPVHAVSPAVVRYVIEKSG 120

Query: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180
           GVRHGIPFLQALAFFNWATASETF+HSA PYN+MIDLAGKV+QFGLAWHLIDLMKARNVE
Sbjct: 121 GVRHGIPFLQALAFFNWATASETFDHSALPYNQMIDLAGKVRQFGLAWHLIDLMKARNVE 180

Query: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240
           ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAF+IVISIL KKRRATEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFSIVISILSKKRRATEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300
           FDNLKHKFEPDVIVYT+LVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC
Sbjct: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300

Query: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360
           GQITRAHDVFSEM+DAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY
Sbjct: 301 GQITRAHDVFSEMVDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360

Query: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420
           NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCI KSHDVNGVHRMFA+MKD
Sbjct: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIAKSHDVNGVHRMFARMKD 420

Query: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480
           LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN
Sbjct: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480

Query: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERG +S+
Sbjct: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGFASR 532

[Close]
BLAST of Carg17216 vs. ExPASy Swiss-Prot
Match: Q9LN22 (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 2.7e-212
Identity = 362/537 (67.41%), Postives = 442/537 (82.31%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHAS---KPVLSP 60
           MAL +SK +L   LS +SP L      +S+TS+      DE A   T   S    P+L+P
Sbjct: 1   MALLRSKLHLSRTLSFISPLLPK-TFSTSATSLLSDHENDESAATITAAVSVPISPLLTP 60

Query: 61  EEIQAADKFHSLIKEYYRRNP-SPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVI 120
           E+ Q  +KFHS+IK++YR+NP SP+    +P+  + ALS + SQI     VSP+VVR VI
Sbjct: 61  EDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIE-TSQVSPSVVRCVI 120

Query: 121 EKSGGVRHGIPFLQALAFFNWATASETFEH-SAHPYNEMIDLAGKVKQFGLAWHLIDLMK 180
           EK G VRHGIP  Q+LAFFNWAT+ + ++H S HPYNEMIDL+GKV+QF LAWHLIDLMK
Sbjct: 121 EKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMK 180

Query: 181 ARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRAT 240
           +RNVEI++ETF+IL+RRYVRAGLA+EAVH FNRMEDYGC PDKIAF+IVIS L +KRRA+
Sbjct: 181 SRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRAS 240

Query: 241 EAQSFFDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVID 300
           EAQSFFD+LK +FEPDVIVYTNLV GWCRAG+ISEAE+VFKEMK+AGI PNVYTYSIVID
Sbjct: 241 EAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVID 300

Query: 301 ALCRCGQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAA 360
           ALCRCGQI+RAHDVF++M+D+GC PN++TFNNL+RVHVKAGRTEKVLQVYNQMK+LGC  
Sbjct: 301 ALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP 360

Query: 361 DIITYNFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMF 420
           D ITYNFLIE HC+D+NL  A KVLN+M KK C  NASTFN IFR I K  DVNG HRM+
Sbjct: 361 DTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMY 420

Query: 421 AKMKDLGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGM 480
           +KM +  C+PNTVTYNILMRMF  SKS DM+ K+KKEM+++EVEPN+NTY++L++++CGM
Sbjct: 421 SKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGM 480

Query: 481 GHWNNAYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           GHWNNAYK F+EM+EEKCL PS+ +YEMVL QLR+AGQLKKHEELV+KM+++GL ++
Sbjct: 481 GHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVAR 535

[Close]
BLAST of Carg17216 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-62
Identity = 126/377 (33.42%), Postives = 212/377 (56.23%), Query Frame = 0 

Query: 134 FFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVEITVETFSILVRRY 193
           FF W+     +EHS   Y+ MI+   K++Q+ L W LI+ M+ + + + VETF I++R+Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKY 179

Query: 194 VRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSFFDNLKHKFEPDVI 253
            RA    EA++AFN ME Y   P+ +AF  ++S LCK +   +AQ  F+N++ +F PD  
Sbjct: 180 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK 239

Query: 254 VYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRCGQITRAHDVFSEM 313
            Y+ L+ GW +  ++ +A  VF+EM  AG  P++ TYSI++D LC+ G++  A  +   M
Sbjct: 240 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 299

Query: 314 IDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITYNFLIETHCKDDNL 373
             + C P +  ++ L+  +    R E+ +  + +M+R G  AD+  +N LI   CK + +
Sbjct: 300 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 359

Query: 374 GEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKDLGCKPNTVTYNIL 433
               +VL  M  KG TPN+ + N I R +++  + +    +F KM  + C+P+  TY ++
Sbjct: 360 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMV 419

Query: 434 MRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNNAYKFFREMIEEKC 493
           ++MF E K  +   K+ K M ++ V P+++T+ VLI+  C       A     EMI E  
Sbjct: 420 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI-EMG 479

Query: 494 LKPSMPIYEMVLQQLRK 511
           ++PS   +  + Q L K
Sbjct: 480 IRPSGVTFGRLRQLLIK 493

[Close]
BLAST of Carg17216 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.3e-59
Identity = 132/419 (31.50%), Postives = 220/419 (52.51%), Query Frame = 0 

Query: 107 VSPAVVRYVIEKSGGVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGL 166
           +SPA++  V++K          + AL+ F WA   + F+H+   YN +I+  GK+KQF L
Sbjct: 92  LSPALIEEVLKKLSNAG-----VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKL 151

Query: 167 AWHLIDLMKARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVIS 226
            W L+D MKA+ + ++ ETF+++ RRY RA    EA+ AF++ME++G   +   F  ++ 
Sbjct: 152 IWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLD 211

Query: 227 ILCKKRRATEAQSFFDNLKHK-FEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISP 286
            L K R   +AQ  FD +K K FEPD+  YT L+ GW +  ++   + V +EMK  G  P
Sbjct: 212 TLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEP 271

Query: 287 NVYTYSIVIDALCRCGQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVY 346
           +V  Y I+I+A C+  +   A   F+EM    C P+   F +LI       +    L+ +
Sbjct: 272 DVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 331

Query: 347 NQMKRLGCAADIITYNFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKS 406
            + K  G   +  TYN L+  +C    + +A K ++ M  KG  PNA T++ I   +++ 
Sbjct: 332 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRM 391

Query: 407 HDVNGVHRMFAKMKDLGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTY 466
                 + ++  M    C+P   TY I++RMF   +  DM  K+  EM+ + V P ++ +
Sbjct: 392 QRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMF 451

Query: 467 QVLISLYCGMGHWNNAYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKM 525
             LI+  C     + A ++F EM++   ++P   ++  + Q L   G+  K  +LV KM
Sbjct: 452 SSLITALCHENKLDEACEYFNEMLDVG-IRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500

[Close]
BLAST of Carg17216 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-56
Identity = 112/358 (31.28%), Postives = 189/358 (52.79%), Query Frame = 0 

Query: 134 FFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE-ITVETFSILVRR 193
           FF WAT    + HS      M+ +  K++QFG  W LI+ M+  N E I  E F +L+RR
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176

Query: 194 YVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSFFDNLKHKFEPDV 253
           +  A +  +AV   + M  YG  PD+  F  ++  LCK     EA   F++++ KF P++
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNL 236

Query: 254 IVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRCGQITRAHDVFSE 313
             +T+L++GWCR G + EA+ V  +MK AG+ P++  ++ ++      G++  A+D+ ++
Sbjct: 237 RYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMND 296

Query: 314 MIDAGCNPNSVTFNNLIRVHVKA-GRTEKVLQVYNQMKRLGCAADIITYNFLIETHCKDD 373
           M   G  PN   +  LI+   +   R ++ ++V+ +M+R GC ADI+TY  LI   CK  
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356

Query: 374 NLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKDLGCKPNTVTYN 433
            + +   VL+ M KKG  P+  T+  I     K         +  KMK  GC P+ + YN
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416

Query: 434 ILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNNAYKFFREMI 490
           +++R+  +        +L  EME   + P ++T+ ++I+ +   G    A   F+EM+
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474

[Close]
BLAST of Carg17216 vs. ExPASy Swiss-Prot
Match: Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.7e-53
Identity = 114/392 (29.08%), Postives = 198/392 (50.51%), Query Frame = 0 

Query: 79  SPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSGGVRHGIPFLQALAFFNWA 138
           SP+ T     F++S  +            +P +V  V+++     HG   LQ   F +  
Sbjct: 35  SPNTTHQDDQFLLSTKTTPW---------TPNLVNSVLKRLW--NHGPKALQFFHFLD-- 94

Query: 139 TASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVEITVETFSILVRRYVRAGL 198
                + H A  ++  ID+A ++      W LI  M++  +  + +TF+I+  RY  AG 
Sbjct: 95  NHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGK 154

Query: 199 AAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSFFDNLKHKFEPDVIVYTNL 258
             +AV  F  M ++GC  D  +F  ++ +LCK +R  +A   F  L+ +F  D + Y  +
Sbjct: 155 PDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVI 214

Query: 259 VHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRCGQITRAHDVFSEMIDAGC 318
           ++GWC      +A  V KEM   GI+PN+ TY+ ++    R GQI  A + F EM    C
Sbjct: 215 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 274

Query: 319 NPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITYNFLIETHCKDDNLGEATK 378
             + VT+  ++     AG  ++   V+++M R G    + TYN +I+  CK DN+  A  
Sbjct: 275 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 334

Query: 379 VLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKDLGCKPNTVTYNILMRMFA 438
           +   M ++G  PN +T+N + R +  + + +    +  +M++ GC+PN  TYN+++R ++
Sbjct: 335 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 394

Query: 439 ESKSADMIFKLKKEMEEEEVEPNLNTYQVLIS 471
           E    +    L ++M   +  PNL+TY +LIS
Sbjct: 395 ECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413

[Close]
BLAST of Carg17216 vs. ExPASy TrEMBL
Match: A0A6J1FLC3 (pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111446459 PE=4 SV=1)

HSP 1 Score: 1058.1 bits (2735), Expect = 1.3e-305
Identity = 523/532 (98.31%), Postives = 525/532 (98.68%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60
           MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDA NTTP ASKPVL PEEI
Sbjct: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDASNTTPKASKPVLLPEEI 60

Query: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120
           QAADKFHSLIKEYYRRNPSPDPTPPSPNF ISALSNELSQISPVHAVSP VVRYVIEKSG
Sbjct: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFTISALSNELSQISPVHAVSPGVVRYVIEKSG 120

Query: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180
           GVRHGIPFLQALAFFNWATASETFEHSA PYNEMIDLAGKVKQFGLAWHLIDLMKARNVE
Sbjct: 121 GVRHGIPFLQALAFFNWATASETFEHSAQPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180

Query: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240
           ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300
           FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC
Sbjct: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300

Query: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360
           GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY
Sbjct: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360

Query: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420
           NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD
Sbjct: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420

Query: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480
           LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN
Sbjct: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480

Query: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERG +S+
Sbjct: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGFASR 532

[Close]
BLAST of Carg17216 vs. ExPASy TrEMBL
Match: A0A6J1J1A0 (pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111480961 PE=4 SV=1)

HSP 1 Score: 1039.6 bits (2687), Expect = 4.6e-300
Identity = 513/532 (96.43%), Postives = 523/532 (98.31%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60
           MALFKSKPNL PFLSSLSPFLQNHRLFSSSTSISESQLQDEDA NTTP+ASKPVL PEEI
Sbjct: 1   MALFKSKPNLSPFLSSLSPFLQNHRLFSSSTSISESQLQDEDASNTTPNASKPVLLPEEI 60

Query: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120
           QAA KFHSLIKEYYRRNPSPDPTPPSPNF ISALSNELSQISPVHAVSPAVVRYVIEKSG
Sbjct: 61  QAAGKFHSLIKEYYRRNPSPDPTPPSPNFTISALSNELSQISPVHAVSPAVVRYVIEKSG 120

Query: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180
           GVRHGIPFLQALAFFNWATASETF+HSA PYN+MIDLAGKV+QFGLAWHLIDLMKARNVE
Sbjct: 121 GVRHGIPFLQALAFFNWATASETFDHSALPYNQMIDLAGKVRQFGLAWHLIDLMKARNVE 180

Query: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240
           ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAF+IVISIL KKRRATEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFSIVISILSKKRRATEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300
           FDNLKHKFEPDVIVYT+LVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC
Sbjct: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300

Query: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360
           GQITRAHDVFSEM+DAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY
Sbjct: 301 GQITRAHDVFSEMVDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360

Query: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420
           NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCI KSHDVNGVHRMFA+MKD
Sbjct: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIAKSHDVNGVHRMFARMKD 420

Query: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480
           LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN
Sbjct: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480

Query: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERG +S+
Sbjct: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGFASR 532

[Close]
BLAST of Carg17216 vs. ExPASy TrEMBL
Match: A0A6J1CG38 (pentatricopeptide repeat-containing protein At1g20300, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011204 PE=3 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 6.8e-275
Identity = 470/538 (87.36%), Postives = 502/538 (93.31%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISES------QLQDEDAGNTTPHASKPV 60
           MAL +SKPNLP FLSSLS  +QNHR FSSS SISE+      Q QDEDA  +  +ASKP+
Sbjct: 1   MALIRSKPNLPRFLSSLSHRIQNHRSFSSSPSISEADAEVHLQNQDEDASQSPQNASKPL 60

Query: 61  LSPEEIQAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRY 120
           LSPEE+Q ADKF++LIKEYYRRNP+PDPTPP PNF ISA SNELS IS VH+VSPAVVR+
Sbjct: 61  LSPEEMQTADKFYALIKEYYRRNPNPDPTPPCPNFTISAFSNELSHISAVHSVSPAVVRH 120

Query: 121 VIEKSGGVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLM 180
           VIEKSGGVRHGIPFLQALAFFNWATA E F+HSA PYNEMIDLAGKV+QFGLAWHLIDLM
Sbjct: 121 VIEKSGGVRHGIPFLQALAFFNWATAREGFQHSAEPYNEMIDLAGKVRQFGLAWHLIDLM 180

Query: 181 KARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRA 240
           KAR VEITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAF+IV+SILCKKRRA
Sbjct: 181 KARTVEITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFSIVVSILCKKRRA 240

Query: 241 TEAQSFFDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVI 300
           +EAQSFFD+LKHKFEPDV+VYT+LVHGWCRAG+ISEAERVFKEMKMAGISPNVYTYSIVI
Sbjct: 241 SEAQSFFDSLKHKFEPDVVVYTSLVHGWCRAGEISEAERVFKEMKMAGISPNVYTYSIVI 300

Query: 301 DALCRCGQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCA 360
           DALCRCGQITRAHDVFSEMID+GCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQM+RLGCA
Sbjct: 301 DALCRCGQITRAHDVFSEMIDSGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMRRLGCA 360

Query: 361 ADIITYNFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRM 420
           ADIITYNF+IETHC+DDNLGEA KVLNSMAKKGC+PNASTFNPIFRCI KS DVN  HRM
Sbjct: 361 ADIITYNFIIETHCRDDNLGEAIKVLNSMAKKGCSPNASTFNPIFRCIAKSQDVNSAHRM 420

Query: 421 FAKMKDLGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCG 480
           FAKMKDLGCK NTVTYNILMRMFAESKSADMIFKLKKEM+EEEVEPN+NTY+VLISLYCG
Sbjct: 421 FAKMKDLGCKANTVTYNILMRMFAESKSADMIFKLKKEMDEEEVEPNVNTYRVLISLYCG 480

Query: 481 MGHWNNAYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           MGHWNNAYKFFREMIEEKCLKPSMPIY+MVLQ LR AGQLKKHEELVDKMVERG +S+
Sbjct: 481 MGHWNNAYKFFREMIEEKCLKPSMPIYQMVLQLLRNAGQLKKHEELVDKMVERGFASR 538

[Close]
BLAST of Carg17216 vs. ExPASy TrEMBL
Match: A0A5A7V5E7 (Calcium-dependent protein kinase 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001380 PE=3 SV=1)

HSP 1 Score: 911.8 bits (2355), Expect = 1.5e-261
Identity = 446/532 (83.83%), Postives = 487/532 (91.54%), Query Frame = 0 

Query: 1    MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60
            MAL KSK NLPPFLSSLS  +QNHR FS S SIS+S LQDE A ++  + S PVLSP++I
Sbjct: 528  MALIKSKLNLPPFLSSLSHRIQNHRSFSFSPSISDSPLQDELASDSPQNPSNPVLSPDQI 587

Query: 61   QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120
            Q ++KFH+LIKEYYRRNPSPD TPPSPNF IS+LSN+LSQIS  H+VSPAVVRYVIEKSG
Sbjct: 588  QVSEKFHALIKEYYRRNPSPDSTPPSPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 647

Query: 121  GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180
             VRHGIPFL ALAFFNW TA E FEHS  PYNEMIDLAGKV+QFGLAW+LIDLMKARNVE
Sbjct: 648  AVRHGIPFLPALAFFNWVTAGEGFEHSTQPYNEMIDLAGKVRQFGLAWYLIDLMKARNVE 707

Query: 181  ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240
            ITVETFSILVRRYVRAGLAAEAVHAFNRME+YGC  D +AF+IVISILCKKRRA EAQSF
Sbjct: 708  ITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGCTADTVAFSIVISILCKKRRAVEAQSF 767

Query: 241  FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300
            FDNLKHKFEPDV+VYT+LVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCR 
Sbjct: 768  FDNLKHKFEPDVVVYTSLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRS 827

Query: 301  GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360
            GQITRAHDVF+EM++AGCNPNSVTFNNLIRVHV+AGRTEKVLQVYNQM+RL CAAD+ITY
Sbjct: 828  GQITRAHDVFAEMLNAGCNPNSVTFNNLIRVHVRAGRTEKVLQVYNQMRRLRCAADLITY 887

Query: 361  NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420
            NFLIETHCKD+NLGEA KVLNSM K GCTP+AS+FNPIFRCI KS DVNG HRMFA+MKD
Sbjct: 888  NFLIETHCKDENLGEAIKVLNSMIKNGCTPDASSFNPIFRCIAKSQDVNGAHRMFARMKD 947

Query: 421  LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480
            +GCKPNT TYNILMRMFA  KSADMIFKLKKEM+EEEVEPN+NTY+ LI+LYCGMGHWNN
Sbjct: 948  VGCKPNTATYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNVNTYRELITLYCGMGHWNN 1007

Query: 481  AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
            AYKFFREMIEEK LKPSM +Y+MVL+QLR+AGQLKKHEELVDKMVERG +S+
Sbjct: 1008 AYKFFREMIEEKNLKPSMSLYKMVLEQLREAGQLKKHEELVDKMVERGFASR 1059

[Close]
BLAST of Carg17216 vs. ExPASy TrEMBL
Match: A0A0A0LE95 (PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G874400 PE=3 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 5.5e-261
Identity = 446/532 (83.83%), Postives = 486/532 (91.35%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHASKPVLSPEEI 60
           MAL KSK NLPPFLSSLS  +QNHR FSSS SIS+  LQD+ A ++  +AS P+LSPE+I
Sbjct: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60

Query: 61  QAADKFHSLIKEYYRRNPSPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSG 120
           Q ++KFH+LIKEYYRRNP PD TPP PNF IS+LSN+LSQIS  H+VSPAVVRYVIEKSG
Sbjct: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120

Query: 121 GVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE 180
            VRHGIPFL ALAFFNWATA E FEHS  PYNEMIDLAGKVKQFGLAW+LIDLMKARNVE
Sbjct: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180

Query: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSF 240
           ITV TFS+LVRRYVRAGLAAEAVHAFNRMEDYGCN D IAF+ VISILCKKRRA EAQSF
Sbjct: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRC 300
           FDNLKHKFEPDVIVYT+LVHGWCRAGDISEAE VF+EMKMAGISPNVYTYSIVIDALCR 
Sbjct: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS 300

Query: 301 GQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITY 360
           GQITRAHDVF+EM+DAGCNPNSVTFNNLIRVH++AGRTEKVLQVYNQMKRL CAAD+ITY
Sbjct: 301 GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY 360

Query: 361 NFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKD 420
           NFLIETHCKDDNLGEA KVLNSMAK  CTPNAS+FNPIFRCI KS DVNG HRMFA+MK+
Sbjct: 361 NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE 420

Query: 421 LGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNN 480
           +GCKPNTVTYNILMRMFA  KSADMIFKLKKEM+EEEVEPN NTY+ LI+LYCGMGHWN+
Sbjct: 421 VGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH 480

Query: 481 AYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           AY FFREMI+EKC+KPSMP+Y+MVL++LRKAGQLKKHEELVDKMVERG +S+
Sbjct: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASR 532

[Close]
BLAST of Carg17216 vs. TAIR 10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 739.6 bits (1908), Expect = 1.9e-213
Identity = 362/537 (67.41%), Postives = 442/537 (82.31%), Query Frame = 0 

Query: 1   MALFKSKPNLPPFLSSLSPFLQNHRLFSSSTSISESQLQDEDAGNTTPHAS---KPVLSP 60
           MAL +SK +L   LS +SP L      +S+TS+      DE A   T   S    P+L+P
Sbjct: 1   MALLRSKLHLSRTLSFISPLLPK-TFSTSATSLLSDHENDESAATITAAVSVPISPLLTP 60

Query: 61  EEIQAADKFHSLIKEYYRRNP-SPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVI 120
           E+ Q  +KFHS+IK++YR+NP SP+    +P+  + ALS + SQI     VSP+VVR VI
Sbjct: 61  EDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIE-TSQVSPSVVRCVI 120

Query: 121 EKSGGVRHGIPFLQALAFFNWATASETFEH-SAHPYNEMIDLAGKVKQFGLAWHLIDLMK 180
           EK G VRHGIP  Q+LAFFNWAT+ + ++H S HPYNEMIDL+GKV+QF LAWHLIDLMK
Sbjct: 121 EKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMK 180

Query: 181 ARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRAT 240
           +RNVEI++ETF+IL+RRYVRAGLA+EAVH FNRMEDYGC PDKIAF+IVIS L +KRRA+
Sbjct: 181 SRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRAS 240

Query: 241 EAQSFFDNLKHKFEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVID 300
           EAQSFFD+LK +FEPDVIVYTNLV GWCRAG+ISEAE+VFKEMK+AGI PNVYTYSIVID
Sbjct: 241 EAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVID 300

Query: 301 ALCRCGQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAA 360
           ALCRCGQI+RAHDVF++M+D+GC PN++TFNNL+RVHVKAGRTEKVLQVYNQMK+LGC  
Sbjct: 301 ALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP 360

Query: 361 DIITYNFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMF 420
           D ITYNFLIE HC+D+NL  A KVLN+M KK C  NASTFN IFR I K  DVNG HRM+
Sbjct: 361 DTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMY 420

Query: 421 AKMKDLGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGM 480
           +KM +  C+PNTVTYNILMRMF  SKS DM+ K+KKEM+++EVEPN+NTY++L++++CGM
Sbjct: 421 SKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGM 480

Query: 481 GHWNNAYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKMVERGLSSK 533
           GHWNNAYK F+EM+EEKCL PS+ +YEMVL QLR+AGQLKKHEELV+KM+++GL ++
Sbjct: 481 GHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVAR 535

[Close]
BLAST of Carg17216 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 242.7 bits (618), Expect = 7.3e-64
Identity = 126/377 (33.42%), Postives = 212/377 (56.23%), Query Frame = 0 

Query: 134 FFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVEITVETFSILVRRY 193
           FF W+     +EHS   Y+ MI+   K++Q+ L W LI+ M+ + + + VETF I++R+Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKY 179

Query: 194 VRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSFFDNLKHKFEPDVI 253
            RA    EA++AFN ME Y   P+ +AF  ++S LCK +   +AQ  F+N++ +F PD  
Sbjct: 180 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK 239

Query: 254 VYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRCGQITRAHDVFSEM 313
            Y+ L+ GW +  ++ +A  VF+EM  AG  P++ TYSI++D LC+ G++  A  +   M
Sbjct: 240 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 299

Query: 314 IDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITYNFLIETHCKDDNL 373
             + C P +  ++ L+  +    R E+ +  + +M+R G  AD+  +N LI   CK + +
Sbjct: 300 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 359

Query: 374 GEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKDLGCKPNTVTYNIL 433
               +VL  M  KG TPN+ + N I R +++  + +    +F KM  + C+P+  TY ++
Sbjct: 360 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMV 419

Query: 434 MRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNNAYKFFREMIEEKC 493
           ++MF E K  +   K+ K M ++ V P+++T+ VLI+  C       A     EMI E  
Sbjct: 420 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI-EMG 479

Query: 494 LKPSMPIYEMVLQQLRK 511
           ++PS   +  + Q L K
Sbjct: 480 IRPSGVTFGRLRQLLIK 493

[Close]
BLAST of Carg17216 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 230.3 bits (586), Expect = 3.8e-60
Identity = 132/419 (31.50%), Postives = 220/419 (52.51%), Query Frame = 0 

Query: 107 VSPAVVRYVIEKSGGVRHGIPFLQALAFFNWATASETFEHSAHPYNEMIDLAGKVKQFGL 166
           +SPA++  V++K          + AL+ F WA   + F+H+   YN +I+  GK+KQF L
Sbjct: 92  LSPALIEEVLKKLSNAG-----VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKL 151

Query: 167 AWHLIDLMKARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVIS 226
            W L+D MKA+ + ++ ETF+++ RRY RA    EA+ AF++ME++G   +   F  ++ 
Sbjct: 152 IWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLD 211

Query: 227 ILCKKRRATEAQSFFDNLKHK-FEPDVIVYTNLVHGWCRAGDISEAERVFKEMKMAGISP 286
            L K R   +AQ  FD +K K FEPD+  YT L+ GW +  ++   + V +EMK  G  P
Sbjct: 212 TLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEP 271

Query: 287 NVYTYSIVIDALCRCGQITRAHDVFSEMIDAGCNPNSVTFNNLIRVHVKAGRTEKVLQVY 346
           +V  Y I+I+A C+  +   A   F+EM    C P+   F +LI       +    L+ +
Sbjct: 272 DVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 331

Query: 347 NQMKRLGCAADIITYNFLIETHCKDDNLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKS 406
            + K  G   +  TYN L+  +C    + +A K ++ M  KG  PNA T++ I   +++ 
Sbjct: 332 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRM 391

Query: 407 HDVNGVHRMFAKMKDLGCKPNTVTYNILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTY 466
                 + ++  M    C+P   TY I++RMF   +  DM  K+  EM+ + V P ++ +
Sbjct: 392 QRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMF 451

Query: 467 QVLISLYCGMGHWNNAYKFFREMIEEKCLKPSMPIYEMVLQQLRKAGQLKKHEELVDKM 525
             LI+  C     + A ++F EM++   ++P   ++  + Q L   G+  K  +LV KM
Sbjct: 452 SSLITALCHENKLDEACEYFNEMLDVG-IRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500

[Close]
BLAST of Carg17216 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 221.9 bits (564), Expect = 1.3e-57
Identity = 112/358 (31.28%), Postives = 189/358 (52.79%), Query Frame = 0 

Query: 134 FFNWATASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVE-ITVETFSILVRR 193
           FF WAT    + HS      M+ +  K++QFG  W LI+ M+  N E I  E F +L+RR
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176

Query: 194 YVRAGLAAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSFFDNLKHKFEPDV 253
           +  A +  +AV   + M  YG  PD+  F  ++  LCK     EA   F++++ KF P++
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNL 236

Query: 254 IVYTNLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRCGQITRAHDVFSE 313
             +T+L++GWCR G + EA+ V  +MK AG+ P++  ++ ++      G++  A+D+ ++
Sbjct: 237 RYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMND 296

Query: 314 MIDAGCNPNSVTFNNLIRVHVKA-GRTEKVLQVYNQMKRLGCAADIITYNFLIETHCKDD 373
           M   G  PN   +  LI+   +   R ++ ++V+ +M+R GC ADI+TY  LI   CK  
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356

Query: 374 NLGEATKVLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKDLGCKPNTVTYN 433
            + +   VL+ M KKG  P+  T+  I     K         +  KMK  GC P+ + YN
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416

Query: 434 ILMRMFAESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNNAYKFFREMI 490
           +++R+  +        +L  EME   + P ++T+ ++I+ +   G    A   F+EM+
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474

[Close]
BLAST of Carg17216 vs. TAIR 10
Match: AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 4.0e-54
Identity = 122/434 (28.11%), Postives = 214/434 (49.31%), Query Frame = 0 

Query: 79  SPDPTPPSPNFIISALSNELSQISPVHAVSPAVVRYVIEKSGGVRHGIPFLQALAFFNWA 138
           SP+ T     F++S  +            +P +V  V+++     HG   LQ   F +  
Sbjct: 35  SPNTTHQDDQFLLSTKTTPW---------TPNLVNSVLKRLW--NHGPKALQFFHFLD-- 94

Query: 139 TASETFEHSAHPYNEMIDLAGKVKQFGLAWHLIDLMKARNVEITVETFSILVRRYVRAGL 198
                + H A  ++  ID+A ++      W LI  M++  +  + +TF+I+  RY  AG 
Sbjct: 95  NHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGK 154

Query: 199 AAEAVHAFNRMEDYGCNPDKIAFTIVISILCKKRRATEAQSFFDNLKHKFEPDVIVYTNL 258
             +AV  F  M ++GC  D  +F  ++ +LCK +R  +A   F  L+ +F  D + Y  +
Sbjct: 155 PDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVI 214

Query: 259 VHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRCGQITRAHDVFSEMIDAGC 318
           ++GWC      +A  V KEM   GI+PN+ TY+ ++    R GQI  A + F EM    C
Sbjct: 215 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 274

Query: 319 NPNSVTFNNLIRVHVKAGRTEKVLQVYNQMKRLGCAADIITYNFLIETHCKDDNLGEATK 378
             + VT+  ++     AG  ++   V+++M R G    + TYN +I+  CK DN+  A  
Sbjct: 275 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 334

Query: 379 VLNSMAKKGCTPNASTFNPIFRCIVKSHDVNGVHRMFAKMKDLGCKPNTVTYNILMRMFA 438
           +   M ++G  PN +T+N + R +  + + +    +  +M++ GC+PN  TYN+++R ++
Sbjct: 335 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 394

Query: 439 ESKSADMIFKLKKEMEEEEVEPNLNTYQVLISLYCGMGHWNNAYKFFREMIEEKCLKPSM 498
           E    +    L ++M   +  PNL+TY +LIS   GM        F R+  E+  +  + 
Sbjct: 395 ECSEVEKALGLFEKMGSGDCLPNLDTYNILIS---GM--------FVRKRSEDMVVAGNQ 444

Query: 499 PIYEMVLQQLRKAG 513
              + +L+   K+G
Sbjct: 455 AFAKEILRLQSKSG 444

The following BLAST results are available for this feature:
BLAST of Carg17216 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7037929.10.0e+00100.00Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6608612.18.7e-31099.44Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022941057.12.6e-30598.31pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita ... [more]
XP_023524986.11.6e-30297.74pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita ... [more]
XP_022981970.19.6e-30096.43pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucurbita ... [more]
BLAST of Carg17216 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LN222.7e-21267.41Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop... [more]
Q9FVX21.0e-6233.42Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
Q9C9A25.3e-5931.50Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
P0C8A01.9e-5631.28Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... [more]
Q9S7R45.7e-5329.08Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... [more]
BLAST of Carg17216 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FLC31.3e-30598.31pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Cucurbit... [more]
A0A6J1J1A04.6e-30096.43pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Cucurbit... [more]
A0A6J1CG386.8e-27587.36pentatricopeptide repeat-containing protein At1g20300, mitochondrial isoform X1 ... [more]
A0A5A7V5E71.5e-26183.83Calcium-dependent protein kinase 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A0A0LE955.5e-26183.83PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G874400 PE... [more]
BLAST of Carg17216 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G20300.11.9e-21367.41Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G77360.17.3e-6433.42Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G71060.13.8e-6031.50Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G49730.11.3e-5731.28Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74900.14.0e-5428.11Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 425..473
e-value: 2.3E-11
score: 43.7
coord: 250..299
e-value: 2.1E-18
score: 66.2
coord: 320..364
e-value: 2.8E-12
score: 46.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 428..461
e-value: 3.7E-5
score: 21.6
coord: 253..287
e-value: 1.5E-9
score: 35.4
coord: 394..427
e-value: 4.2E-5
score: 21.4
coord: 323..356
e-value: 5.8E-9
score: 33.6
coord: 358..392
e-value: 1.4E-6
score: 26.1
coord: 464..494
e-value: 9.4E-6
score: 23.5
coord: 288..321
e-value: 2.2E-10
score: 38.1
coord: 185..217
e-value: 3.9E-6
score: 24.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 170..228
e-value: 5.1E-4
score: 20.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 426..460
score: 10.402331
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 356..390
score: 11.761533
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 10.676364
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 391..425
score: 9.821383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 11.619036
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 13.318037
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 461..495
score: 10.511944
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 251..285
score: 13.559186
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 316..383
e-value: 5.0E-20
score: 73.8
coord: 384..452
e-value: 6.2E-17
score: 63.7
coord: 127..245
e-value: 5.5E-23
score: 83.5
coord: 246..315
e-value: 3.1E-24
score: 87.5
coord: 453..528
e-value: 4.1E-14
score: 54.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 216..490
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..52
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 15..532
NoneNo IPR availablePANTHERPTHR45613:SF128CHLOROPLAST RNA PROCESSING 1-LIKE PROTEINcoord: 15..532

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17216-RACarg17216-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity