Carg12410 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCTTTTTTCCTCTCTAGAGTTCATATACCCAATTCCCATCCCGTGCGAAGAGAAGGCAATCGAAAAGACGCCGTGCAGTGTCTGCCGCGCTCGTCCTGCTCTCCGTTGTTGCGATTTAATTGCAAACCTGTTCCTTCGCCACTGCAACAAAGATACTGGAGGACGGGAATCGGATTCTTTAATCTCGATCGAGATCAACATTTTGGATTTCTCTTTGTTGTTTTTGGACTGTAAGCTATCCATCGCGCCGATTTTCAATTTTTCGTTTTGCTTCTTCTTCTATTGTTTCCGGATAAAATGGTGATATTTTTCTGAAATTGTTCAGTAGCTCTGTGATATTACTTAGAGTGTTAAGATTGCTACGAAATGAGACATCGCTGCGACGTTCTAGTTCTCTTATTTTAAACACTGTCAAGAGAAATCAATCTGCGAAGTTTGCGTTAAGAAATCTCCATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGTAAGTTACGAATAGTTTGTGCCTCATTTCTTCCATTTTTGGCTTTGATTTATGAGCTTGCCTCCTTACTGTTTGATAAATTGCTTGAAAGCAATATATATGTATATTGTTTATATATAGTTTTCTTGTACTGGAATCTCAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGCGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTTGTTAAATCTCCGCATAATACCCAAAAAATTTAAGTTGATTGAAAATGAAATTGAGCTGCTGTATAAATTTCACTGCTAGATGGAAAAAAAAATAGGGAAAAATTATAAAATCCACTTAGAACAATAAGGGTGTTGCAATTGTATTTCAAAACTTCTTTGCAATTAAACTACATCATTGTAACTTTGTGATGATTGAGTGTAGTGTAACAATTCTCATAGTTTATGTGTTCTAATGGTTGTTCTAAGTGGTTGGACCTTTTTCAACTTGCAACGAACAGAATTGTTGCAAAACTGTTCAATTGCAGCGAGTTCATCAGTTTGAGGATAATTGCTTGAATTTAAAGTTTGAGGGTGGGATTGTAATAACTAGATAAGGTCGTGAATTAAGCTGAATCTAATCATTATGATATAATTGTAAACCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCAAAGGGAGGAATGATCGGAACCGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAAAAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTCATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGAGGTAATTCTTGAATGGAAGCATGAAAATTTCTGATTGCTTAATTTGTGCATGTGTTTGTTCTTGTTGTGAAAGTTCTGAATATACCCATCTGCTTGAATGCTTCCTGTTTGATGCGTTTGCAGTCGTCTCTGTCATGTACTTGAATCTGAACACTAAAAGGATTAGTATTAGAGTTGAAAATTTCTGGCCTTTTGATATCAATCTCTATGGATTGGTTTTAAGTTTTAATCGATACTTGGTTCATCAATTCTCTCAAATGTTCTAACTTTTCACTAATGATCTTATGTATTCAAATTATTAACTTGCATCCAATTTCGAATGATTGTCTTTTCAATATAAAGTTCGAAAACGAAATACGATGTTTAAAAATATAAAGACTAAAATGAAACAATGTACGAAATCTTAAGGACTATCCCATGGCTCAATCCTTTTATTACCAATGTTTTTGTGAAAATTTGATGTTATCTCGGGAATGATGGAAATTTCTTAGTAGTATTATATAACTAGATTCTTGTTGAATATACT TTTTCTTTTTTCCTCTCTAGAGTTCATATACCCAATTCCCATCCCGTGCGAAGAGAAGGCAATCGAAAAGACGCCGTGCAGTGTCTGCCGCGCTCGTCCTGCTCTCCGTTGTTGCGATTTAATTGCAAACCTGTTCCTTCGCCACTGCAACAAAGATACTGGAGGACGGGAATCGGATTCTTTAATCTCGATCGAGATCAACATTTTGGATTTCTCTTTGTTGTTTTTGGACTGTAAGCTATCCATCGCGCCGATTTTCAATTTTTCGTTTTGCTTCTTCTTCTATTGTTTCCGGATAAAATGGTGATATTTTTCTGAAATTGTTCAGTAGCTCTGTGATATTACTTAGAGTGTTAAGATTGCTACGAAATGAGACATCGCTGCGACGTTCTAGTTCTCTTATTTTAAACACTGTCAAGAGAAATCAATCTGCGAAGTTTGCGTTAAGAAATCTCCATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGCGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCAAAGGGAGGAATGATCGGAACCGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAAAAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTCATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGAGGTAATTCTTGAATGGAAGCATGAAAATTTCTGATTGCTTAATTTGTGCATGTGTTTGTTCTTGTTGTGAAAGTTCTGAATATACCCATCTGCTTGAATGCTTCCTGTTTGATGCGTTTGCAGTCGTCTCTGTCATGTACTTGAATCTGAACACTAAAAGGATTAGTATTAGAGTTGAAAATTTCTGGCCTTTTGATATCAATCTCTATGGATTGGTTTTAAGTTTTAATCGATACTTGGTTCATCAATTCTCTCAAATGTTCTAACTTTTCACTAATGATCTTATGTATTCAAATTATTAACTTGCATCCAATTTCGAATGATTGTCTTTTCAATATAAAGTTCGAAAACGAAATACGATGTTTAAAAATATAAAGACTAAAATGAAACAATGTACGAAATCTTAAGGACTATCCCATGGCTCAATCCTTTTATTACCAATGTTTTTGTGAAAATTTGATGTTATCTCGGGAATGATGGAAATTTCTTAGTAGTATTATATAACTAGATTCTTGTTGAATATACT ATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGCGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCAAAGGGAGGAATGATCGGAACCGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAAAAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTCATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGA MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNETSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFDKDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE Homology
BLAST of Carg12410 vs. NCBI nr
Match: XP_022948350.1 (uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948351.1 uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948352.1 uncharacterized protein LOC111452054 [Cucurbita moschata] >KAG6607290.1 hypothetical protein SDJN03_00632, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036967.1 hypothetical protein SDJN02_00587 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 332.8 bits (852), Expect = 1.7e-87 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Carg12410 vs. NCBI nr
Match: XP_022998684.1 (uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998685.1 uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998686.1 uncharacterized protein LOC111493271 [Cucurbita maxima]) HSP 1 Score: 330.9 bits (847), Expect = 6.3e-87 Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of Carg12410 vs. NCBI nr
Match: XP_023523491.1 (uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo] >XP_023523492.1 uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 328.6 bits (841), Expect = 3.1e-86 Identity = 159/162 (98.15%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of Carg12410 vs. NCBI nr
Match: XP_004154327.1 (uncharacterized protein LOC101221969 isoform X1 [Cucumis sativus] >XP_011658438.1 uncharacterized protein LOC101221969 isoform X1 [Cucumis sativus] >KGN65782.1 hypothetical protein Csa_023340 [Cucumis sativus]) HSP 1 Score: 313.9 bits (803), Expect = 8.0e-82 Identity = 149/162 (91.98%), Postives = 157/162 (96.91%), Query Frame = 0
BLAST of Carg12410 vs. NCBI nr
Match: XP_038895441.1 (uncharacterized protein LOC120083675 [Benincasa hispida] >XP_038895442.1 uncharacterized protein LOC120083675 [Benincasa hispida]) HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81 Identity = 150/162 (92.59%), Postives = 158/162 (97.53%), Query Frame = 0
BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A6J1G9K9 (uncharacterized protein LOC111452054 OS=Cucurbita moschata OX=3662 GN=LOC111452054 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 8.0e-88 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A6J1KD63 (uncharacterized protein LOC111493271 OS=Cucurbita maxima OX=3661 GN=LOC111493271 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 3.0e-87 Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A0A0LY68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528470 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 3.9e-82 Identity = 149/162 (91.98%), Postives = 157/162 (96.91%), Query Frame = 0
BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A6J1HJ79 (uncharacterized protein LOC111464959 OS=Cucurbita moschata OX=3662 GN=LOC111464959 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 6.6e-82 Identity = 150/162 (92.59%), Postives = 157/162 (96.91%), Query Frame = 0
BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A1S3C5F1 (uncharacterized protein LOC103497102 OS=Cucumis melo OX=3656 GN=LOC103497102 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 8.0e-80 Identity = 145/162 (89.51%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Carg12410 vs. TAIR 10
Match: AT5G58920.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 256.9 bits (655), Expect = 1.1e-68 Identity = 114/162 (70.37%), Postives = 144/162 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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