Homology
BLAST of MELO3C005376.jh1 vs. NCBI nr
Match:
XP_016898810.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898812.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898813.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])
HSP 1 Score: 910 bits (2353), Expect = 0.0
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0
Query: 1 MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1 MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
Query: 61 KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61 KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
Query: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
Query: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
Query: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD
Sbjct: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
Query: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
BLAST of MELO3C005376.jh1 vs. NCBI nr
Match:
XP_004143708.2 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KAE8647948.1 hypothetical protein Csa_000134 [Cucumis sativus])
HSP 1 Score: 874 bits (2257), Expect = 0.0
Identity = 445/462 (96.32%), Postives = 451/462 (97.62%), Query Frame = 0
Query: 1 MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
MLIFFGYHPK LTSNFTSFKTRA+FLFN T SRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1 MLIFFGYHPKSLTSNFTSFKTRAFFLFNLTLSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
Query: 61 KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
KK RKVLKFQ+LILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61 KKTRKVLKFQELILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
Query: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYRE+GSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
FSF+VNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
Query: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
MLSLTVEKK+TLERIAHFRLAM LPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
Query: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
R ELVEPNDVYLARR LAELVLLSPRKA +DRELVGYRRERVGYDMEN RTDYVEDKS D
Sbjct: 361 RSELVEPNDVYLARRQLAELVLLSPRKATVDRELVGYRRERVGYDMENSRTDYVEDKSVD 420
Query: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
BLAST of MELO3C005376.jh1 vs. NCBI nr
Match:
TYK00294.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])
HSP 1 Score: 845 bits (2182), Expect = 2.97e-308
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 360
Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
Query: 455 VEDVDITE 462
VEDVDITE
Sbjct: 421 VEDVDITE 428
BLAST of MELO3C005376.jh1 vs. NCBI nr
Match:
KAA0055169.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])
HSP 1 Score: 831 bits (2146), Expect = 7.01e-302
Identity = 419/420 (99.76%), Postives = 420/420 (100.00%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
HQGIFYISTRGNHGKLHTVFLREGYRRG+LVEPNDVYLARRHLAELVLLSPRKAKLDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGDLVEPNDVYLARRHLAELVLLSPRKAKLDREL 360
Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
BLAST of MELO3C005376.jh1 vs. NCBI nr
Match:
XP_038876292.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038876293.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])
HSP 1 Score: 823 bits (2125), Expect = 5.84e-299
Identity = 419/465 (90.11%), Postives = 440/465 (94.62%), Query Frame = 0
Query: 2 LIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEK 61
+IFFG+H KFLTS F +F+T AYFL NF+RSRSM+QSTSIPK LQRVRDHGYDNYMEVEK
Sbjct: 1 MIFFGHHRKFLTSKFIAFETTAYFLCNFSRSRSMTQSTSIPKKLQRVRDHGYDNYMEVEK 60
Query: 62 KIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI 121
K RKVLKFQDLIL+Q NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI
Sbjct: 61 KTRKVLKFQDLILTQINQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI 120
Query: 122 LYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDD 181
LYCRLTRKAHLQIEQQK+AVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPDD
Sbjct: 121 LYCRLTRKAHLQIEQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDD 180
Query: 182 FEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIRF 241
FEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP+L VCAIERARERVYRE+GSDAEDIRF
Sbjct: 181 FEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLAVCAIERARERVYREKGSDAEDIRF 240
Query: 242 SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEM 301
SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYED+S+YDMRSIEA KRMEKRAVATIHEM
Sbjct: 241 SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVSKYDMRSIEALKRMEKRAVATIHEM 300
Query: 302 LSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRR 361
LSLTVEKK+TLERIAHFRLAMNLP KLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRR
Sbjct: 301 LSLTVEKKITLERIAHFRLAMNLPNKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRR 360
Query: 362 GELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDDF 421
GEL+EPNDVYLARR LAELVLLSPRKAKLD+ELVGYRRERVGYDME+ RTDYVEDK DDF
Sbjct: 361 GELIEPNDVYLARRKLAELVLLSPRKAKLDKELVGYRRERVGYDMESFRTDYVEDKFDDF 420
Query: 422 GVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE----VEDVDITE 462
V NKGNVRDVLDSD+ SDVE +FSDDDNHSV+ EDV+ TE
Sbjct: 421 AVGNKGNVRDVLDSDLDSDVEPNFSDDDNHSVDKTFKAEDVNETE 465
BLAST of MELO3C005376.jh1 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 600.9 bits (1548), Expect = 1.2e-170
Identity = 297/373 (79.62%), Postives = 331/373 (88.74%), Query Frame = 0
Query: 28 NFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLD 87
N + SQST+IPK RVRDHGYDNYMEVEKKIRKV+KF LILSQ N TI +S LD
Sbjct: 27 NLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLD 86
Query: 88 ILARR--LGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQI 147
LARR LGFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTRKA QI + AV+ QI
Sbjct: 87 TLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI 146
Query: 148 PDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNK 207
PDAVTRLRKL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D +ETR+K
Sbjct: 147 PDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDK 206
Query: 208 YIEIVERDPSLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQ 267
YIEIVE+DP+L++CAIER RE YR +G DAED+RFSF+VNFPPGFKIGKYFRIA+WKWQ
Sbjct: 207 YIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQ 266
Query: 268 RLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLP 327
RLPYWSPYEDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKK+TLERIAHFR MNLP
Sbjct: 267 RLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLP 326
Query: 328 KKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSP 387
KKLK+FLLQHQGIFYISTRGN+GKLHTVFLREGY+RGELVEPNDVYLARR LAELVL+SP
Sbjct: 327 KKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSP 386
Query: 388 RKAKLDRELVGYR 399
RKAK+D ELV YR
Sbjct: 387 RKAKVDAELVRYR 399
BLAST of MELO3C005376.jh1 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 1.9e-38
Identity = 128/421 (30.40%), Postives = 217/421 (51.54%), Query Frame = 0
Query: 45 LQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGF-KQHEAGAF 104
++R ++ +D ++ +KK++ VLK ++++++Q ++ + + L R LG ++ A
Sbjct: 55 VKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIAL 114
Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGR 164
+ +FP VF++ E V + + RLT A + R AV +LRKLLMMS + R
Sbjct: 115 LRRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKR 174
Query: 165 LRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIER 224
+ +E + + + GLP +F +V L++PQ+FR+ + R +E+ DP L V A E
Sbjct: 175 ILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRV--VRMDRGPALELTHWDPELAVSAAEL 234
Query: 225 ARERVYREQGSDA-----EDIRFSFIVNFPPGFKI--GKYFRIAMWKWQRLPYWSPYEDI 284
A E + + ++F+ V P G K+ G+ RIA +K +PY SPY D
Sbjct: 235 AEEESRAREAEERNLIIDRPLKFN-RVRLPKGLKLTRGEARRIARFK--EMPYISPYADF 294
Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQ 344
S +RS +K EK A +HE+LSLTVEK+ ++ + HFR + L+ +++H
Sbjct: 295 SH--LRSGSDEK--EKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHP 354
Query: 345 GIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVG 404
+FY+S +G+ +VFLRE Y+ +LVE N + L + + LV + PR + R VG
Sbjct: 355 DMFYVSFKGDR---DSVFLREAYKDSQLVEKNQLVLLKEKMRALVAV-PRFPR--RAAVG 414
Query: 405 YRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVE 458
E G + D V D+ D E ++ D++ G ++D+ D E +
Sbjct: 415 TGEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWGDGWFGEND 459
BLAST of MELO3C005376.jh1 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 160.2 bits (404), Expect = 5.5e-38
Identity = 136/433 (31.41%), Postives = 225/433 (51.96%), Query Frame = 0
Query: 45 LQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGF-KQHEAGAF 104
++R ++ +DN ++ +KK++ VLK +++++S ++ + + L R LG ++ A
Sbjct: 61 VKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIAL 120
Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGR 164
+ +FP VFE+ E V + + RLT A + AVT+LRKLLMMS R
Sbjct: 121 LKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKR 180
Query: 165 LRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE- 224
+ +E I +++ GLP +F ++ L++PQ+FR+ + R +E+ DP L V A E
Sbjct: 181 ILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRV--VQMDRGPGLELTHWDPELAVSAAEV 240
Query: 225 -----RARERVYREQGSDAEDIRFSFIVNFPPGFKI--GKYFRIAMWKWQRLPYWSPYED 284
RARE R D ++F+ V P G K+ G+ R+A +K +PY SPY D
Sbjct: 241 AEEENRAREEQERNLIID-RPLKFN-RVKLPQGLKLSRGEARRVAQFK--EMPYISPYSD 300
Query: 285 ISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQH 344
S +RS A+K EK A +HE+LSLT+EK+ ++ + HFR + L+ L++H
Sbjct: 301 FSH--LRSGSAEK--EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 360
Query: 345 QGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLS--PRKA----- 404
+FY+S +G+ +VFLRE Y+ +LVE + + L + + LV + PR+
Sbjct: 361 PDMFYVSLKGDR---DSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATS 420
Query: 405 -KLDRELVGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDV----LDSDIGSDVES 455
+ DR + G D+E+ + + D +D E G D D +G + +S
Sbjct: 421 EEADRTNGAAQMLSEGSDVEDDEDEGLSD-MEDLISEISGGKSDTDYHWGDGWVGENDDS 478
BLAST of MELO3C005376.jh1 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 3.7e-34
Identity = 119/417 (28.54%), Postives = 215/417 (51.56%), Query Frame = 0
Query: 45 LQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAG-AF 104
++R ++ +D+ ++ +KK++ VL + +++SQ ++ + + L R LG K+ A
Sbjct: 76 VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135
Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDA-VTRLRKLLMMSNKG 164
+ K+P VFEI E + + + L +++ + + ++ D V +LRKL+MMS
Sbjct: 136 LRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMR--IRNELEDVLVVKLRKLVMMSIDK 195
Query: 165 RLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE 224
R+ LE I +++ GLP +F ++ ++PQ+FR+ R +E+ DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255
Query: 225 ------RARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDI 284
R RE R D +F+ V P G + K + +++ + Y SPY+D
Sbjct: 256 LSEDDNRTRESEERNLIIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 315
Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQ 344
S ++E EK A IHE+LSLT EK+ ++ + HFR ++L+ L++H
Sbjct: 316 SHLRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 375
Query: 345 GIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLS--PRKAKLDREL 404
+FY+S +G +VFLRE YR EL++ + + L + + LV + PR+
Sbjct: 376 DLFYVSLKGER---DSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRG------ 435
Query: 405 VGYRRERVGYDMENCRTDY-VEDKSDDFGVENKGNVRDVLD-SDIGSDVESDFSDDD 450
G R++ G ++E +D E++ ++ E +V L+ D G+D + D++DD+
Sbjct: 436 -GPRKDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDE 472
BLAST of MELO3C005376.jh1 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.1e-22
Identity = 110/394 (27.92%), Postives = 179/394 (45.43%), Query Frame = 0
Query: 20 KTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEV--EKKIRKVLKFQDLILSQF 79
KT A N T+ R T + ++ RD +DN + +++ V+ ++ I+ +
Sbjct: 9 KTVASSCTNLTQKR-----TYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEP 68
Query: 80 NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQ 139
N+ IP+S + R+ + F+ KFP +FE + P + + RLT +A ++++Q
Sbjct: 69 NRCIPISAISKKTRQFDVST-KIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEA-TELDRQ 128
Query: 140 KRAVI-AQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRL 199
+R V D RL+KL++MS L L ++ + GLPDD+ + FR
Sbjct: 129 ERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRF 188
Query: 200 FDAKE-TRNKYIEIVERDPSLTVC---AIERARERVYREQGSDAEDIRFSFIVNFPPGFK 259
D ++ + ++ D L+V A+++ R V E+ + FP
Sbjct: 189 VDMEDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEE------------IEFPLFPS 248
Query: 260 IGKYFRIAMWKW----QRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEK 319
G R+ + W Q+LPY SPY+D S D S A EKR V +HE+L L VE
Sbjct: 249 KGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIA----EKRVVGFLHELLCLFVEH 308
Query: 320 KLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPN 379
+++ + LP+K+ +H IFY+S + K T LRE YR VE +
Sbjct: 309 SAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMK---NKTCTAILREPYRDKASVETH 368
Query: 380 DVYLARRHLAELVLLSPRKAKLDRELVGYRRERV 403
V R+ +L+ S K R G+R E V
Sbjct: 369 PVLGVRKKYIQLMKNSELILKSRRNSFGFRDEGV 376
BLAST of MELO3C005376.jh1 vs. ExPASy TrEMBL
Match:
A0A1S4DS47 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4 SV=1)
HSP 1 Score: 910 bits (2353), Expect = 0.0
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0
Query: 1 MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1 MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
Query: 61 KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61 KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
Query: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
Query: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
Query: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD
Sbjct: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
Query: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
BLAST of MELO3C005376.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3BLZ6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00370 PE=4 SV=1)
HSP 1 Score: 845 bits (2182), Expect = 1.44e-308
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 360
Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
Query: 455 VEDVDITE 462
VEDVDITE
Sbjct: 421 VEDVDITE 428
BLAST of MELO3C005376.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7UNY2 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G001020 PE=4 SV=1)
HSP 1 Score: 831 bits (2146), Expect = 3.39e-302
Identity = 419/420 (99.76%), Postives = 420/420 (100.00%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
HQGIFYISTRGNHGKLHTVFLREGYRRG+LVEPNDVYLARRHLAELVLLSPRKAKLDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGDLVEPNDVYLARRHLAELVLLSPRKAKLDREL 360
Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
BLAST of MELO3C005376.jh1 vs. ExPASy TrEMBL
Match:
A0A0A0KLD1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 SV=1)
HSP 1 Score: 817 bits (2111), Expect = 9.49e-298
Identity = 415/428 (96.96%), Postives = 420/428 (98.13%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQ+LILSQFNQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYRE+GSDAEDIRFSF+VNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAM LPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394
HQGIFYISTRGNHGKLHTVFLREGYRR ELVEPNDVYLARR LAELVLLSPRKA +DREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
Query: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454
VGYRRERVGYDMEN RTDYVEDKS DFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
Query: 455 VEDVDITE 462
VEDVDITE
Sbjct: 421 VEDVDITE 428
BLAST of MELO3C005376.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1EMT6 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC111435790 PE=4 SV=1)
HSP 1 Score: 788 bits (2034), Expect = 1.84e-285
Identity = 401/465 (86.24%), Postives = 433/465 (93.12%), Query Frame = 0
Query: 1 MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
M+IF+GY KF ++ FT+FKT AY L NF+RSRSMSQSTSIP+ L+RVRDHGYDNYM+VE
Sbjct: 1 MMIFYGYCSKFRSTKFTAFKTTAYVLCNFSRSRSMSQSTSIPRKLERVRDHGYDNYMDVE 60
Query: 61 KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
KK RKVLKFQDLIL+Q NQTIPVSRLD+ ARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61 KKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
Query: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
ILYCRLTRKAHLQIEQ+K+AVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
DFEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP+LTVCAIE+ARERVYRE+GSDAEDIR
Sbjct: 181 DFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLTVCAIEKARERVYREKGSDAEDIR 240
Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
FSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHE 300
Query: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
ML LTVEKK++LERIAHFRLAM+LPKKLKDFLLQHQGIFYISTRGNHGKLHT+FLRE YR
Sbjct: 301 MLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQHQGIFYISTRGNHGKLHTIFLREAYR 360
Query: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
RGEL+EPNDVYLARR LAELVLLSPRKAKL+RELVGYRRERVGYDME+ R D K DD
Sbjct: 361 RGELIEPNDVYLARRTLAELVLLSPRKAKLNRELVGYRRERVGYDMESFRPD----KLDD 420
Query: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSV----EVEDVDIT 461
+G ++GNVRDVLDSD+GSD ESDFSDD N SV E EDV+IT
Sbjct: 421 YGAGDRGNVRDVLDSDVGSDSESDFSDDSNRSVDETFEEEDVNIT 461
BLAST of MELO3C005376.jh1 vs. TAIR 10
Match:
AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 600.9 bits (1548), Expect = 8.7e-172
Identity = 297/373 (79.62%), Postives = 331/373 (88.74%), Query Frame = 0
Query: 28 NFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLD 87
N + SQST+IPK RVRDHGYDNYMEVEKKIRKV+KF LILSQ N TI +S LD
Sbjct: 27 NLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLD 86
Query: 88 ILARR--LGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQI 147
LARR LGFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTRKA QI + AV+ QI
Sbjct: 87 TLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI 146
Query: 148 PDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNK 207
PDAVTRLRKL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D +ETR+K
Sbjct: 147 PDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDK 206
Query: 208 YIEIVERDPSLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQ 267
YIEIVE+DP+L++CAIER RE YR +G DAED+RFSF+VNFPPGFKIGKYFRIA+WKWQ
Sbjct: 207 YIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQ 266
Query: 268 RLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLP 327
RLPYWSPYEDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKK+TLERIAHFR MNLP
Sbjct: 267 RLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLP 326
Query: 328 KKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSP 387
KKLK+FLLQHQGIFYISTRGN+GKLHTVFLREGY+RGELVEPNDVYLARR LAELVL+SP
Sbjct: 327 KKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSP 386
Query: 388 RKAKLDRELVGYR 399
RKAK+D ELV YR
Sbjct: 387 RKAKVDAELVRYR 399
BLAST of MELO3C005376.jh1 vs. TAIR 10
Match:
AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 234.2 bits (596), Expect = 2.1e-61
Identity = 147/384 (38.28%), Postives = 225/384 (58.59%), Query Frame = 0
Query: 26 LFNFTRSRSMSQSTSIPKNLQ-RVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVS 85
L+ + + R + S L+ R RDH D + +K+ +L+ L+ S+ + P
Sbjct: 46 LYFYNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSSK--KRGPFV 105
Query: 86 RLDILAR--RLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVI 145
L +++R L GAF+ K+PH FEI+ HP + L C++T K + I++++ V
Sbjct: 106 SLQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVR 165
Query: 146 AQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKET 205
DAV R++KLL++S G LR+ +R+ R E GLP+DF S++ K+ FRL D +
Sbjct: 166 ECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET- 225
Query: 206 RNKYIEIVER-DPSLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAM 265
+E+V+R D SL V +E RE YRE+ + ++F ++ P GFKI K FR +
Sbjct: 226 ----LELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREEL 285
Query: 266 WKWQRLPYWSPYE--DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFR 325
WQR+PY PY+ +IS R +E R EKR VA IHE+LSLTVEK + +ER+AHFR
Sbjct: 286 KNWQRVPYVKPYDRKEIS----RGLE---RFEKRVVAVIHELLSLTVEKMVEVERLAHFR 345
Query: 326 LAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAE 385
+ + +++ +L+H GIFY+ST+G+ T+FLRE Y +G L+EPN +Y RR + +
Sbjct: 346 KDLGIEVNVREVILKHPGIFYVSTKGSS---QTLFLREAYSKGCLIEPNPIYNVRRKMLD 405
Query: 386 LVLLSPRKAK--LDRELVGYRRER 402
LVLL R ++ L RE +R E+
Sbjct: 406 LVLLKTRYSRMLLQREDETHREEK 412
BLAST of MELO3C005376.jh1 vs. TAIR 10
Match:
AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 226.5 bits (576), Expect = 4.4e-59
Identity = 130/306 (42.48%), Postives = 192/306 (62.75%), Query Frame = 0
Query: 101 GAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSN 160
GAF+ K+PH FEI+ HP + L C++T K + I++++ V DAV R++KLL++S
Sbjct: 37 GAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSK 96
Query: 161 KGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER-DPSLTVC 220
G LR+ +R+ R E GLP+DF S++ K+ FRL D + +E+V+R D SL V
Sbjct: 97 HGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDRDDESLCVA 156
Query: 221 AIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE--DIS 280
+E RE YRE+ + ++F ++ P GFKI K FR + WQR+PY PY+ +IS
Sbjct: 157 KVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKEIS 216
Query: 281 EYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQG 340
R +E R EKR VA IHE+LSLTVEK + +ER+AHFR + + +++ +L+H G
Sbjct: 217 ----RGLE---RFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPG 276
Query: 341 IFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAK--LDRELV 400
IFY+ST+G+ T+FLRE Y +G L+EPN +Y RR + +LVLL R ++ L RE
Sbjct: 277 IFYVSTKGSS---QTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQREDE 327
Query: 401 GYRRER 402
+R E+
Sbjct: 337 THREEK 327
BLAST of MELO3C005376.jh1 vs. TAIR 10
Match:
AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 223.4 bits (568), Expect = 3.8e-58
Identity = 140/360 (38.89%), Postives = 200/360 (55.56%), Query Frame = 0
Query: 36 SQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGF 95
S +TS R RD ++ M+ K + KV+ QDL L+ P ++ L+ RL
Sbjct: 23 STTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLS-RLSQ 82
Query: 96 KQH---EAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRL 155
K H A +F+ K+PH+F + PV+ +CRLT A Q+ A+ A + V RL
Sbjct: 83 KLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRL 142
Query: 156 RKLLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER 215
+LL MS + L + E GLPDDFE SV+ K+P F+L D E+ +E+V+
Sbjct: 143 VRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQE 202
Query: 216 DPSLT--VCAIERAR--ERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLP 275
+ A+E+ R E + D +I+FSF ++PPG ++ K F+ + +WQRLP
Sbjct: 203 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 262
Query: 276 YWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKL 335
Y PYED+ +S +EKRAVA HE L+LTVEK + +E+I+HFR + +
Sbjct: 263 YVGPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 322
Query: 336 KDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKA 389
+D L H G+FY+ST+ GK HTVFLRE Y RG L++PN VY ARR L +LVLL A
Sbjct: 323 RDLFLDHPGMFYVSTK---GKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAA 377
BLAST of MELO3C005376.jh1 vs. TAIR 10
Match:
AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 147.5 bits (371), Expect = 2.6e-35
Identity = 119/417 (28.54%), Postives = 215/417 (51.56%), Query Frame = 0
Query: 45 LQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAG-AF 104
++R ++ +D+ ++ +KK++ VL + +++SQ ++ + + L R LG K+ A
Sbjct: 76 VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135
Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDA-VTRLRKLLMMSNKG 164
+ K+P VFEI E + + + L +++ + + ++ D V +LRKL+MMS
Sbjct: 136 LRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMR--IRNELEDVLVVKLRKLVMMSIDK 195
Query: 165 RLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE 224
R+ LE I +++ GLP +F ++ ++PQ+FR+ R +E+ DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255
Query: 225 ------RARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDI 284
R RE R D +F+ V P G + K + +++ + Y SPY+D
Sbjct: 256 LSEDDNRTRESEERNLIIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 315
Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQ 344
S ++E EK A IHE+LSLT EK+ ++ + HFR ++L+ L++H
Sbjct: 316 SHLRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 375
Query: 345 GIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLS--PRKAKLDREL 404
+FY+S +G +VFLRE YR EL++ + + L + + LV + PR+
Sbjct: 376 DLFYVSLKGER---DSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRG------ 435
Query: 405 VGYRRERVGYDMENCRTDY-VEDKSDDFGVENKGNVRDVLD-SDIGSDVESDFSDDD 450
G R++ G ++E +D E++ ++ E +V L+ D G+D + D++DD+
Sbjct: 436 -GPRKDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDE 472
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_016898810.1 | 0.0 | 100.00 | PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PR... | [more] |
XP_004143708.2 | 0.0 | 96.32 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KAE8647948.1 hypothetical... | [more] |
TYK00294.1 | 2.97e-308 | 100.00 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] | [more] |
KAA0055169.1 | 7.01e-302 | 99.76 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] | [more] |
XP_038876292.1 | 5.84e-299 | 90.11 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038876293.1 protein ... | [more] |
Match Name | E-value | Identity | Description | |
Q689D6 | 1.2e-170 | 79.62 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
B6TTV8 | 1.9e-38 | 30.40 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
Q65XL5 | 5.5e-38 | 31.41 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
A0MFS5 | 3.7e-34 | 28.54 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
Q9ZUZ6 | 1.1e-22 | 27.92 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4DS47 | 0.0 | 100.00 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4... | [more] |
A0A5D3BLZ6 | 1.44e-308 | 100.00 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A5A7UNY2 | 3.39e-302 | 99.76 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
A0A0A0KLD1 | 9.49e-298 | 96.96 | PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 S... | [more] |
A0A6J1EMT6 | 1.84e-285 | 86.24 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC11143579... | [more] |
Match Name | E-value | Identity | Description | |
AT4G33495.1 | 8.7e-172 | 79.62 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G45790.2 | 2.1e-61 | 38.28 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G45790.1 | 4.4e-59 | 42.48 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT1G06440.1 | 3.8e-58 | 38.89 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT4G01037.1 | 2.6e-35 | 28.54 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |