MELO3C033302.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033302.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionCACTA en-spm transposon protein
Locationchr08: 16887595 .. 16888827 (-)
RNA-Seq ExpressionMELO3C033302.jh1
SyntenyMELO3C033302.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTACATAAGGTACTATCCTACATGTGTTCGTATCTGCTTATTGAATGTTTGTTTTTTATGTCCACAGGCATTATGTCATACACACGTAATAATTTTCTGAAGACGGATACTATGTTCCTTGAGTTTAAGGATGATTTAGATAACCTTGCGGGAGGGTCATCGTCCGTGGGCGATAATGCGGGTGAGTCTAAGAATTTCATTCATTTTAACTTAGGATTATTTCATGTTTTTTTCTCTAACATTATATGTTATTATAATTTATTGAGCAGGGTCGTCTTCTCAACCACCTGCGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGTGTTGGAGCGCCACGTTGTTGTCAATGGGCGTATTTCGATGACGATTGCCCCTAGAGAGGAGAAGTCTACTTTCTCACACGCCGTTCGCTTCAGCCAGGTAATAGGCATGTGCGTGCGAAAGATATTTTCTGTCCGCTACTTTAAATGAGCAGACGTTGGCATAGAATACATTGAGGTCGTCAAGGGTGACCTCTAGGTAATTAAGTCCACTAAATATTTATGATTTCATTTGAAATATATCTAAGTTAACCAATCTAATGTGTTATTTTTGTAATGTGTAGTGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTAAGCATCAGATGCTCACCACCTTTAAGGAGTTTCGGGGCGATTGTCAGTCCTTTAAAAAGTACAGCGACCTCGAGGAGGCTCGTGCCAACCCACCAAACGTATTGGTTAGACGTCATGAGGATTAACACTTCCTCTGCGACCGCTACATGAGTCATGCATTCCAGGTATTTGTCATGCTTAATTATGATTTCAACTTTTAATATGTATAAGAAATAAACAATATTATTATTTTCATGCAAGAGCAATCACGGACGGACAAGGTTGCTAGATAGAAGCAGCCTTACAATCATAGTAGCGGGTCAAAGTTGTTTCTACAACGACAGCACAAGCTCGCTGAGAAAAAAGGGGAACTGATCGACCATGTGGAGTTGTTTCAAAAAACACATGTTTGAGCCGGGACGTTCGTGTCGCAGGCCACAAAGGATGCGCATGTAAGTTATTGATCCAACTCTTGTGTCCTTATTAATTATCCTCTTTCATTATATATTTTTGCGTTACCTAACTTAGTTTTTAAATTTGTTGCAGAATCAAATGCTGAAACTCTAGTCCCAGCCTACCCTAGAGGGTAG

mRNA sequence

TCTACATAAGGTACTATCCTACATGTGTTCGTATCTGCTTATTGAATGTTTGTTTTTTATGTCCACAGGCATTATGTCATACACACGTAATAATTTTCTGAAGACGGATACTATGTTCCTTGAGTTTAAGGATGATTTAGATAACCTTGCGGGAGGGTCATCGTCCGTGGGCGATAATGCGGGGTCGTCTTCTCAACCACCTGCGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGTGTTGGAGCGCCACGTTGTTGTCAATGGGCGTATTTCGATGACGATTGCCCCTAGAGAGGAGAAGTCTACTTTCTCACACGCCGTTCGCTTCAGCCAGTGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTAAGCATCAGATGCTCACCACCTTTAAGGAGTTTCGGGGCGATTGTCAGTCCTTTAAAAAGTACAGCGACCTCGAGGAGGCTCGTGCCAACCCACCAAACGTATTGAGCAATCACGGACGGACAAGGTTGCTAGATAGAAGCAGCCTTACAATCATAGTAGCGGAATCAAATGCTGAAACTCTAGTCCCAGCCTACCCTAGAGGGTAG

Coding sequence (CDS)

ATGTGTTCGTATCTGCTTATTGAATGTTTGTTTTTTATGTCCACAGGCATTATGTCATACACACGTAATAATTTTCTGAAGACGGATACTATGTTCCTTGAGTTTAAGGATGATTTAGATAACCTTGCGGGAGGGTCATCGTCCGTGGGCGATAATGCGGGGTCGTCTTCTCAACCACCTGCGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGTGTTGGAGCGCCACGTTGTTGTCAATGGGCGTATTTCGATGACGATTGCCCCTAGAGAGGAGAAGTCTACTTTCTCACACGCCGTTCGCTTCAGCCAGTGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTAAGCATCAGATGCTCACCACCTTTAAGGAGTTTCGGGGCGATTGTCAGTCCTTTAAAAAGTACAGCGACCTCGAGGAGGCTCGTGCCAACCCACCAAACGTATTGAGCAATCACGGACGGACAAGGTTGCTAGATAGAAGCAGCCTTACAATCATAGTAGCGGAATCAAATGCTGAAACTCTAGTCCCAGCCTACCCTAGAGGGTAG

Protein sequence

MCSYLLIECLFFMSTGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFRGDCQSFKKYSDLEEARANPPNVLSNHGRTRLLDRSSLTIIVAESNAETLVPAYPRG
Homology
BLAST of MELO3C033302.jh1 vs. NCBI nr
Match: KAA0067855.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (731), Expect = 1.25e-95
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0

Query: 16  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 75
           GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV
Sbjct: 44  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 103

Query: 76  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 135
           LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR
Sbjct: 104 LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 163

Query: 136 GDCQSFKKYSDLEEARANPPNVL 158
           GDCQSFKKYSDLEEARANPPNVL
Sbjct: 164 GDCQSFKKYSDLEEARANPPNVL 186

BLAST of MELO3C033302.jh1 vs. NCBI nr
Match: TYK11059.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (594), Expect = 1.19e-74
Identity = 122/146 (83.56%), Postives = 125/146 (85.62%), Query Frame = 0

Query: 16  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 75
           GIMSY RNNFLKTD MFLEFKDDLDNLAGGSSSVGDNA SSSQPPATPTP RRAQSRLLV
Sbjct: 44  GIMSYARNNFLKTDAMFLEFKDDLDNLAGGSSSVGDNAESSSQPPATPTPIRRAQSRLLV 103

Query: 76  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 135
           LERHVVVNGRISMTIAPREEKS FSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKE R
Sbjct: 104 LERHVVVNGRISMTIAPREEKSIFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEVR 163

Query: 136 GDCQSFKKYSDLEEARANPPNVLSNH 161
           GDC S  K      + A P  ++  H
Sbjct: 164 GDCHSPLK------STATPRRLMPTH 183

BLAST of MELO3C033302.jh1 vs. NCBI nr
Match: KAA0067107.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ97490.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (542), Expect = 8.55e-67
Identity = 116/151 (76.82%), Postives = 123/151 (81.46%), Query Frame = 0

Query: 14  STGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRL 73
           S GIMSY RNNFL+TD MFLEF+DDLDN+AGGSSSVGDNA SSSQPPAT TP+RRAQS+L
Sbjct: 42  SYGIMSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQL 101

Query: 74  LVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQW-----FFVLDFNDQAMNRFVKHQML 133
           L LE HV VNGRISMTIAP   K  F H VRF Q      FFVLDFNDQAMN FV+HQML
Sbjct: 102 LKLECHVTVNGRISMTIAPEAIKPIFPHVVRFRQAIGVCRFFVLDFNDQAMNTFVEHQML 161

Query: 134 TTFKEFRGDC-QSFKKYSDLEEARANPPNVL 158
           T FKEFRGDC + FKKYSD EEARANP NVL
Sbjct: 162 TIFKEFRGDCHRHFKKYSDPEEARANPQNVL 192

BLAST of MELO3C033302.jh1 vs. NCBI nr
Match: KAA0050386.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03398.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (541), Expect = 9.31e-65
Identity = 125/204 (61.27%), Postives = 140/204 (68.63%), Query Frame = 0

Query: 2   CSYLLIECLFFMSTGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNA-GSSSQPP 61
           C+Y+++    + +    SY RNNF++ D MFLEF+DDLDN+ GGSSSVGDN   SSSQ  
Sbjct: 92  CNYVMVTSRVWRAIMSWSYPRNNFMEKDAMFLEFEDDLDNIGGGSSSVGDNTVRSSSQQL 151

Query: 62  ATPTPRRRAQSRLLVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQ------------- 121
           ATPTPR RAQSRLL LERHVV+NGRI MTIAPR EK    H VRFSQ             
Sbjct: 152 ATPTPRGRAQSRLLELERHVVINGRIPMTIAPRAEKPISPHVVRFSQAIGVCVQKIFFVH 211

Query: 122 ---W----------FFVLDFNDQAMNRFVKHQMLTTFKEFRGDC-QSFKKYSDLEEARAN 177
              W           FVLDFNDQAMN+FV+HQMLTTFKEFR D  + FKKY+D EEAR N
Sbjct: 212 YLKWANVGREYIERLFVLDFNDQAMNKFVEHQMLTTFKEFRVDYHRHFKKYNDPEEARTN 271

BLAST of MELO3C033302.jh1 vs. NCBI nr
Match: KAA0052779.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04177.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (512), Expect = 4.63e-61
Identity = 109/142 (76.76%), Postives = 116/142 (81.69%), Query Frame = 0

Query: 17  IMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAG-SSSQPPATPTPRRRAQSRLLV 76
           IMSYTRNNFL+TD MFLEF+D+LDNLAGGSSSV DNA  SSSQPP T T RR  QSRLL 
Sbjct: 114 IMSYTRNNFLETDAMFLEFEDNLDNLAGGSSSVDDNATWSSSQPPTTTTLRRHTQSRLLE 173

Query: 77  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 136
           LE HV VNGRI MTI P  EK    H VRFSQ FFVLDFND AMNRFV+HQMLTTFKEF+
Sbjct: 174 LECHVAVNGRIPMTIVPGAEKPISPHVVRFSQRFFVLDFNDHAMNRFVEHQMLTTFKEFQ 233

Query: 137 GDC-QSFKKYSDLEEARANPPN 156
           GDC + FKKYS+ EEARANPPN
Sbjct: 234 GDCHRHFKKYSNPEEARANPPN 255

BLAST of MELO3C033302.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VQ82 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00680 PE=4 SV=1)

HSP 1 Score: 286 bits (731), Expect = 6.05e-96
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0

Query: 16  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 75
           GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV
Sbjct: 44  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 103

Query: 76  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 135
           LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR
Sbjct: 104 LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 163

Query: 136 GDCQSFKKYSDLEEARANPPNVL 158
           GDCQSFKKYSDLEEARANPPNVL
Sbjct: 164 GDCQSFKKYSDLEEARANPPNVL 186

BLAST of MELO3C033302.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CLG1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00440 PE=4 SV=1)

HSP 1 Score: 233 bits (594), Expect = 5.74e-75
Identity = 122/146 (83.56%), Postives = 125/146 (85.62%), Query Frame = 0

Query: 16  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 75
           GIMSY RNNFLKTD MFLEFKDDLDNLAGGSSSVGDNA SSSQPPATPTP RRAQSRLLV
Sbjct: 44  GIMSYARNNFLKTDAMFLEFKDDLDNLAGGSSSVGDNAESSSQPPATPTPIRRAQSRLLV 103

Query: 76  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 135
           LERHVVVNGRISMTIAPREEKS FSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKE R
Sbjct: 104 LERHVVVNGRISMTIAPREEKSIFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEVR 163

Query: 136 GDCQSFKKYSDLEEARANPPNVLSNH 161
           GDC S  K      + A P  ++  H
Sbjct: 164 GDCHSPLK------STATPRRLMPTH 183

BLAST of MELO3C033302.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BCC5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00540 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 4.14e-67
Identity = 116/151 (76.82%), Postives = 123/151 (81.46%), Query Frame = 0

Query: 14  STGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRL 73
           S GIMSY RNNFL+TD MFLEF+DDLDN+AGGSSSVGDNA SSSQPPAT TP+RRAQS+L
Sbjct: 42  SYGIMSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQL 101

Query: 74  LVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQW-----FFVLDFNDQAMNRFVKHQML 133
           L LE HV VNGRISMTIAP   K  F H VRF Q      FFVLDFNDQAMN FV+HQML
Sbjct: 102 LKLECHVTVNGRISMTIAPEAIKPIFPHVVRFRQAIGVCRFFVLDFNDQAMNTFVEHQML 161

Query: 134 TTFKEFRGDC-QSFKKYSDLEEARANPPNVL 158
           T FKEFRGDC + FKKYSD EEARANP NVL
Sbjct: 162 TIFKEFRGDCHRHFKKYSDPEEARANPQNVL 192

BLAST of MELO3C033302.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U876 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2679G00080 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 4.51e-65
Identity = 125/204 (61.27%), Postives = 140/204 (68.63%), Query Frame = 0

Query: 2   CSYLLIECLFFMSTGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNA-GSSSQPP 61
           C+Y+++    + +    SY RNNF++ D MFLEF+DDLDN+ GGSSSVGDN   SSSQ  
Sbjct: 92  CNYVMVTSRVWRAIMSWSYPRNNFMEKDAMFLEFEDDLDNIGGGSSSVGDNTVRSSSQQL 151

Query: 62  ATPTPRRRAQSRLLVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQ------------- 121
           ATPTPR RAQSRLL LERHVV+NGRI MTIAPR EK    H VRFSQ             
Sbjct: 152 ATPTPRGRAQSRLLELERHVVINGRIPMTIAPRAEKPISPHVVRFSQAIGVCVQKIFFVH 211

Query: 122 ---W----------FFVLDFNDQAMNRFVKHQMLTTFKEFRGDC-QSFKKYSDLEEARAN 177
              W           FVLDFNDQAMN+FV+HQMLTTFKEFR D  + FKKY+D EEAR N
Sbjct: 212 YLKWANVGREYIERLFVLDFNDQAMNKFVEHQMLTTFKEFRVDYHRHFKKYNDPEEARTN 271

BLAST of MELO3C033302.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BXD7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00020 PE=4 SV=1)

HSP 1 Score: 201 bits (512), Expect = 2.24e-61
Identity = 109/142 (76.76%), Postives = 116/142 (81.69%), Query Frame = 0

Query: 17  IMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAG-SSSQPPATPTPRRRAQSRLLV 76
           IMSYTRNNFL+TD MFLEF+D+LDNLAGGSSSV DNA  SSSQPP T T RR  QSRLL 
Sbjct: 114 IMSYTRNNFLETDAMFLEFEDNLDNLAGGSSSVDDNATWSSSQPPTTTTLRRHTQSRLLE 173

Query: 77  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 136
           LE HV VNGRI MTI P  EK    H VRFSQ FFVLDFND AMNRFV+HQMLTTFKEF+
Sbjct: 174 LECHVAVNGRIPMTIVPGAEKPISPHVVRFSQRFFVLDFNDHAMNRFVEHQMLTTFKEFQ 233

Query: 137 GDC-QSFKKYSDLEEARANPPN 156
           GDC + FKKYS+ EEARANPPN
Sbjct: 234 GDCHRHFKKYSNPEEARANPPN 255

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0067855.11.25e-95100.00CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK11059.11.19e-7483.56CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0067107.18.55e-6776.82CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ97490.1 CACTA en-... [more]
KAA0050386.19.31e-6561.27CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03398.1 CACTA en-... [more]
KAA0052779.14.63e-6176.76CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04177.1 CACTA en-... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VQ826.05e-96100.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3CLG15.74e-7583.56CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3BCC54.14e-6776.82CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7U8764.51e-6561.27CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3BXD72.24e-6176.76CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033302.jh1.t1MELO3C033302.jh1.t1mRNA