Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAATCCAGCCGTTTCGACGAGGCCGAAATCAAACGGAGCAAACACCTTCGTCATTCACGTGAAGGATGATCAAGATGATTACAGAGGAGGAAGTCCGGCCCCAAGAATCTCTCCGGCGAGGATCATGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTACCTTCTCGAGGTTCGTCAGCCGCGGCGGCGGCGGCAGGGCCATTTACGGCGTTGAAGCAGAAAAATCTGGAGAAATTTGAGCCGCCGAAGACTTCCTGCAGTTCGAGTTACTCGTCTTACTCGCATTACAACGAAGCCATTGCCGATTGTATTGAGTTCTTTAACAAATCGTCGCAGGATCAAATCGGCGTCGATGAAGGCAGAATTTCCGATGCAAATGCGATGGTATGA
mRNA sequence
ATGAAGAATCCAGCCGTTTCGACGAGGCCGAAATCAAACGGAGCAAACACCTTCGTCATTCACGTGAAGGATGATCAAGATGATTACAGAGGAGGAAGTCCGGCCCCAAGAATCTCTCCGGCGAGGATCATGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTACCTTCTCGAGGTTCGTCAGCCGCGGCGGCGGCGGCAGGGCCATTTACGGCGTTGAAGCAGAAAAATCTGGAGAAATTTGAGCCGCCGAAGACTTCCTGCAGTTCGAGTTACTCGTCTTACTCGCATTACAACGAAGCCATTGCCGATTGTATTGAGTTCTTTAACAAATCGTCGCAGGATCAAATCGGCGTCGATGAAGGCAGAATTTCCGATGCAAATGCGATGGTATGA
Coding sequence (CDS)
ATGAAGAATCCAGCCGTTTCGACGAGGCCGAAATCAAACGGAGCAAACACCTTCGTCATTCACGTGAAGGATGATCAAGATGATTACAGAGGAGGAAGTCCGGCCCCAAGAATCTCTCCGGCGAGGATCATGAGCCGGATCCGCCGTGTTCTGATGCGATTCATATTCTATTTACCTTCTCGAGGTTCGTCAGCCGCGGCGGCGGCGGCAGGGCCATTTACGGCGTTGAAGCAGAAAAATCTGGAGAAATTTGAGCCGCCGAAGACTTCCTGCAGTTCGAGTTACTCGTCTTACTCGCATTACAACGAAGCCATTGCCGATTGTATTGAGTTCTTTAACAAATCGTCGCAGGATCAAATCGGCGTCGATGAAGGCAGAATTTCCGATGCAAATGCGATGGTATGA
Protein sequence
MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSRGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIGVDEGRISDANAMV
Homology
BLAST of MELO3C011006.jh1 vs. NCBI nr
Match:
KAA0065168.1 (hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa])
HSP 1 Score: 270 bits (689), Expect = 4.35e-91
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query: 1 MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS
Sbjct: 1 MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
Query: 61 RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI
Sbjct: 61 RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
Query: 121 GVDEGRISDANAMV 134
GVDEGRISDANAMV
Sbjct: 121 GVDEGRISDANAMV 134
BLAST of MELO3C011006.jh1 vs. NCBI nr
Match:
KAE8652124.1 (hypothetical protein Csa_022629 [Cucumis sativus])
HSP 1 Score: 239 bits (610), Expect = 6.80e-79
Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0
Query: 1 MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
MKNPAVSTRPKSNGAN+FV+HVKDDQDDYRGGSPA RISPARI+SRIRRV MRFIFYLPS
Sbjct: 1 MKNPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPS 60
Query: 61 RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
RGS+AAAAAA LKQ+NLEKFEPPKTSCSSSYSSYSHYNEAIADCIEF NKSSQDQI
Sbjct: 61 RGSAAAAAAA-----LKQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSSQDQI 120
Query: 121 GVDEGRISDANAM 133
GVDEGRISDANAM
Sbjct: 121 GVDEGRISDANAM 128
BLAST of MELO3C011006.jh1 vs. NCBI nr
Match:
XP_022996993.1 (uncharacterized protein LOC111492057 [Cucurbita maxima])
HSP 1 Score: 200 bits (509), Expect = 9.96e-64
Identity = 100/133 (75.19%), Postives = 115/133 (86.47%), Query Frame = 0
Query: 2 KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
KNPAVS RPKSNGAN+F+I+V+DDQ+DYRGGSP ISP R +SRIRR+LMRF+FY PSR
Sbjct: 3 KNPAVSIRPKSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFPSR 62
Query: 62 GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
GSS++ +++ A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 63 GSSSSPSSS--IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122
Query: 122 VDEGRISDANAMV 134
ISDANAMV
Sbjct: 123 -----ISDANAMV 128
BLAST of MELO3C011006.jh1 vs. NCBI nr
Match:
KAG7029433.1 (hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 197 bits (501), Expect = 3.06e-62
Identity = 99/133 (74.44%), Postives = 115/133 (86.47%), Query Frame = 0
Query: 2 KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
KNPAVS R KSNGAN+F+I+V+DDQ+DYRGGSP ISPAR +SRIRR+LMRF+FY PSR
Sbjct: 3 KNPAVSIRQKSNGANSFIINVEDDQEDYRGGSPGVSISPARFLSRIRRILMRFMFYFPSR 62
Query: 62 GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
GSS +++++ A K++NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 63 GSSPSSSSS--IMASKRRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122
Query: 122 VDEGRISDANAMV 134
ISDANAMV
Sbjct: 123 -----ISDANAMV 128
BLAST of MELO3C011006.jh1 vs. NCBI nr
Match:
KAG6598497.1 (hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 197 bits (501), Expect = 3.06e-62
Identity = 99/133 (74.44%), Postives = 115/133 (86.47%), Query Frame = 0
Query: 2 KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
KNPAVS R KSNGAN+F+I+V+DDQ+D+RGGSP ISPAR +SRIRR+LMRF+FY PSR
Sbjct: 3 KNPAVSIRQKSNGANSFIINVEDDQEDFRGGSPGVSISPARFLSRIRRILMRFMFYFPSR 62
Query: 62 GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
GSS +++++ A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 63 GSSPSSSSS--IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122
Query: 122 VDEGRISDANAMV 134
ISDANAMV
Sbjct: 123 -----ISDANAMV 128
BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7VC16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005050 PE=4 SV=1)
HSP 1 Score: 270 bits (689), Expect = 2.11e-91
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query: 1 MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS
Sbjct: 1 MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
Query: 61 RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI
Sbjct: 61 RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
Query: 121 GVDEGRISDANAMV 134
GVDEGRISDANAMV
Sbjct: 121 GVDEGRISDANAMV 134
BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match:
A0A0A0LPF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1)
HSP 1 Score: 241 bits (614), Expect = 4.90e-80
Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 0
Query: 1 MKNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPS 60
MKNPAVSTRPKSNGAN+FV+HVKDDQDDYRGGSPA RISPARI+SRIRRV MRFIFYLPS
Sbjct: 1 MKNPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPS 60
Query: 61 RGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQI 120
RGS+AAAAAA LKQ+NLEKFEPPKTSCSSSYSSYSHYNEAIADCIEF NKSSQDQI
Sbjct: 61 RGSAAAAAAA-----LKQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSSQDQI 120
Query: 121 GVDEGRISDANAMV 134
GVDEGRISDANAMV
Sbjct: 121 GVDEGRISDANAMV 129
BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1KCK5 (uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057 PE=4 SV=1)
HSP 1 Score: 200 bits (509), Expect = 4.82e-64
Identity = 100/133 (75.19%), Postives = 115/133 (86.47%), Query Frame = 0
Query: 2 KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
KNPAVS RPKSNGAN+F+I+V+DDQ+DYRGGSP ISP R +SRIRR+LMRF+FY PSR
Sbjct: 3 KNPAVSIRPKSNGANSFIINVEDDQEDYRGGSPGVSISPVRFLSRIRRILMRFMFYFPSR 62
Query: 62 GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIG 121
GSS++ +++ A KQ+NLEKFEPPKTSCSS+YSSYSHYNEAIADCIEFFNKSSQDQIG
Sbjct: 63 GSSSSPSSS--IMASKQRNLEKFEPPKTSCSSNYSSYSHYNEAIADCIEFFNKSSQDQIG 122
Query: 122 VDEGRISDANAMV 134
ISDANAMV
Sbjct: 123 -----ISDANAMV 128
BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1CRC4 (uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014042 PE=4 SV=1)
HSP 1 Score: 173 bits (438), Expect = 3.47e-53
Identity = 93/134 (69.40%), Postives = 107/134 (79.85%), Query Frame = 0
Query: 2 KNPAVSTRPKSNGANTFVIHVKDDQDDYRGGSPAPRISPARIMSRIRRVLMRFIFYLPSR 61
+NP V K NGA+ FVIHV+D Q+DYRGGS +SPARI+SRIRR+ MRFIFY PSR
Sbjct: 5 ENPTVPISHKPNGADGFVIHVRD-QEDYRGGSSGVSLSPARILSRIRRMFMRFIFYFPSR 64
Query: 62 GSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSS-QDQI 121
GSS++ P A +Q+NLEKFEPPKTSCSS+YSSYSHY+EAIADCIEFFNKSS Q+QI
Sbjct: 65 GSSSS-----PIMASRQRNLEKFEPPKTSCSSNYSSYSHYSEAIADCIEFFNKSSLQEQI 124
Query: 122 GVDEGRISDANAMV 134
GV GR SD NAMV
Sbjct: 125 GVG-GRNSDGNAMV 131
BLAST of MELO3C011006.jh1 vs. ExPASy TrEMBL
Match:
A0A6A1UJQ7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G024766 PE=4 SV=1)
HSP 1 Score: 118 bits (296), Expect = 1.21e-31
Identity = 66/123 (53.66%), Postives = 84/123 (68.29%), Query Frame = 0
Query: 15 ANTFVIHVKDDQDDYRGGSPAP--------RISPARIMSRIRRVLMRFIFYLPSRGSSAA 74
A +FVI V+ + R +P S ++ +R R++LMR +F LPSRGSSAA
Sbjct: 8 AESFVIQVRGCEAVDRHQAPHQTSVDSSEFNFSAMKLFNRFRKILMRLLFSLPSRGSSAA 67
Query: 75 AAAAGPFTALKQKNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFFNKSSQDQIGVDEGR 129
+ TA +QKN ++FEPPKTSCSS YSS+SHYNEAIADCIEFFNKSS D+I +D+GR
Sbjct: 68 SG----MTASRQKNCDRFEPPKTSCSSYYSSHSHYNEAIADCIEFFNKSSHDEI-LDDGR 125
BLAST of MELO3C011006.jh1 vs. TAIR 10
Match:
AT1G75717.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 60.8 bits (146), Expect = 9.4e-10
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 0
Query: 42 RIMSRIRRVLMR---FIFYLPSRGSSAAAAAAGPFTALKQKNLEKFEPPKTSCSSS-YSS 101
++ ++ ++LMR F + SR + +G + E+FEPPK SCSSS YSS
Sbjct: 2 KLFHKLGKILMRLIDFTLHSSSRRQKKNNSRSG--------DGERFEPPKISCSSSYYSS 61
Query: 102 YSHYNEAIADCIEFFNKSSQDQIGVDEGRI 128
+ HY+EAIADCIEFFNKSS E R+
Sbjct: 62 HVHYSEAIADCIEFFNKSSAMSCEDHEARL 83
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0065168.1 | 4.35e-91 | 100.00 | hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa] | [more] |
KAE8652124.1 | 6.80e-79 | 90.23 | hypothetical protein Csa_022629 [Cucumis sativus] | [more] |
XP_022996993.1 | 9.96e-64 | 75.19 | uncharacterized protein LOC111492057 [Cucurbita maxima] | [more] |
KAG7029433.1 | 3.06e-62 | 74.44 | hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6598497.1 | 3.06e-62 | 74.44 | hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VC16 | 2.11e-91 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A0A0LPF9 | 4.90e-80 | 90.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1 | [more] |
A0A6J1KCK5 | 4.82e-64 | 75.19 | uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057... | [more] |
A0A6J1CRC4 | 3.47e-53 | 69.40 | uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
A0A6A1UJQ7 | 1.21e-31 | 53.66 | Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G024766 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G75717.1 | 9.4e-10 | 43.33 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |