Cp4.1LG19g02020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAACTGTTTGGAAGAAACAGAGATGGGTTCTGATTTTTGTAGCGATTCATCTTGTTCTTCTGATTCTTCTCGATTGGGGGCTTCTTCTGGAGTTGGGTTTGTCGATGGGCTTTCGATGGTGCAAGAATCGATGAAGTTTCCGGTGAACGCGGCGGCGTTTCAAGCGGAAGGCGAACATTCAGAGGATTTGGAGCTATCAGCTTTTGAGAGGATGAAAGTTGAGAGGCAAATTTCTGCTTCTTTATATGCCATGAATGGAGTTCAGGAGTATATGGAGGCTGTTCATGAGGCCTCTGAGGCAATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA ATGACGAACTGTTTGGAAGAAACAGAGATGGGTTCTGATTTTTGTAGCGATTCATCTTGTTCTTCTGATTCTTCTCGATTGGGGGCTTCTTCTGGAGTTGGGTTTGTCGATGGGCTTTCGATGGTGCAAGAATCGATGAAGTTTCCGGTGAACGCGGCGGCGTTTCAAGCGGAAGGCGAACATTCAGAGGATTTGGAGCTATCAGCTTTTGAGAGGATGAAAGTTGAGAGGCAAATTTCTGCTTCTTTATATGCCATGAATGGAGTTCAGGAGTATATGGAGGCTGTTCATGAGGCCTCTGAGGCAATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA ATGACGAACTGTTTGGAAGAAACAGAGATGGGTTCTGATTTTTGTAGCGATTCATCTTGTTCTTCTGATTCTTCTCGATTGGGGGCTTCTTCTGGAGTTGGGTTTGTCGATGGGCTTTCGATGGTGCAAGAATCGATGAAGTTTCCGGTGAACGCGGCGGCGTTTCAAGCGGAAGGCGAACATTCAGAGGATTTGGAGCTATCAGCTTTTGAGAGGATGAAAGTTGAGAGGCAAATTTCTGCTTCTTTATATGCCATGAATGGAGTTCAGGAGTATATGGAGGCTGTTCATGAGGCCTCTGAGGCAATTTGGGATCTTCCACCACTCTGTTCTTTGTTCTGTTGA MTNCLEETEMGSDFCSDSSCSSDSSRLGASSGVGFVDGLSMVQESMKFPVNAAAFQAEGEHSEDLELSAFERMKVERQISASLYAMNGVQEYMEAVHEASEAIWDLPPLCSLFC Homology
BLAST of Cp4.1LG19g02020 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-17 Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16 Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 5.4e-11 Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.5e-05 Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. NCBI nr
Match: XP_023518070.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo] >XP_023521910.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221 bits (564), Expect = 1.34e-70 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. NCBI nr
Match: XP_022966432.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima]) HSP 1 Score: 213 bits (542), Expect = 3.52e-67 Identity = 110/114 (96.49%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. NCBI nr
Match: XP_022925003.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata] >KAG6595498.1 Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027484.1 Ethylene-responsive transcription factor RAP2-11, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 212 bits (539), Expect = 8.35e-67 Identity = 110/114 (96.49%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. NCBI nr
Match: XP_038883288.1 (ethylene-responsive transcription factor ERN1-like [Benincasa hispida]) HSP 1 Score: 112 bits (280), Expect = 6.38e-28 Identity = 70/114 (61.40%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. NCBI nr
Match: XP_004149126.1 (ethylene-responsive transcription factor ERN1 [Cucumis sativus] >KAE8649371.1 hypothetical protein Csa_019129 [Cucumis sativus]) HSP 1 Score: 106 bits (264), Expect = 1.53e-25 Identity = 67/114 (58.77%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. ExPASy TrEMBL
Match: A0A6J1HMY7 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=3661 GN=LOC111466085 PE=4 SV=1) HSP 1 Score: 213 bits (542), Expect = 1.70e-67 Identity = 110/114 (96.49%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. ExPASy TrEMBL
Match: A0A6J1EE15 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3662 GN=LOC111432381 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 4.04e-67 Identity = 110/114 (96.49%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. ExPASy TrEMBL
Match: A0A5A7UZM7 (Ethylene-responsive transcription factor RAP2-11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00240 PE=4 SV=1) HSP 1 Score: 105 bits (261), Expect = 2.12e-25 Identity = 66/114 (57.89%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. ExPASy TrEMBL
Match: A0A1S3B5E8 (ethylene-responsive transcription factor RAP2-11-like OS=Cucumis melo OX=3656 GN=LOC103485987 PE=4 SV=1) HSP 1 Score: 105 bits (261), Expect = 2.12e-25 Identity = 66/114 (57.89%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. ExPASy TrEMBL
Match: A0A498IK82 (AP2/ERF domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_035104 PE=4 SV=1) HSP 1 Score: 102 bits (255), Expect = 5.79e-24 Identity = 64/123 (52.03%), Postives = 74/123 (60.16%), Query Frame = 0
BLAST of Cp4.1LG19g02020 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 ) HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06 Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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