Cp4.1LG17g06820 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g06820
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Glutaredoxin
Location	Cp4.1LG17: 6332175 .. 6332489 (-)
RNA-Seq Expression	Cp4.1LG17g06820
Synteny	Cp4.1LG17g06820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATAAATGCAGTGAATGGGTTGGTAGCTGAGAAACCAGTAGTGATCTTCAGCAGGAGCCAATGCTCAATGAGCTATACAGTAAAGTCACTTATATCAAGCTATGGGGCAAATCCTACTGTGTATGAGCTTGACGAGATACCCAATGGGCAGCAGATTGAGGCACTGCTGGTTCAACTAGGATGCCAGCCATGTGTGCCTGCTGTGTTCATTGGGCAGAAGTTAATTGGTGGTGCCAAAGAGCTCATGAGCCTGCAGGTCAGGAATGAGCTTATGCCATTGCTCATAAGTGCCAGAGCTATATGGCTCTGA

mRNA sequence

ATGGATATAAATGCAGTGAATGGGTTGGTAGCTGAGAAACCAGTAGTGATCTTCAGCAGGAGCCAATGCTCAATGAGCTATACAGTAAAGTCACTTATATCAAGCTATGGGGCAAATCCTACTGTGTATGAGCTTGACGAGATACCCAATGGGCAGCAGATTGAGGCACTGCTGGTTCAACTAGGATGCCAGCCATGTGTGCCTGCTGTGTTCATTGGGCAGAAGTTAATTGGTGGTGCCAAAGAGCTCATGAGCCTGCAGGTCAGGAATGAGCTTATGCCATTGCTCATAAGTGCCAGAGCTATATGGCTCTGA

Coding sequence (CDS)

ATGGATATAAATGCAGTGAATGGGTTGGTAGCTGAGAAACCAGTAGTGATCTTCAGCAGGAGCCAATGCTCAATGAGCTATACAGTAAAGTCACTTATATCAAGCTATGGGGCAAATCCTACTGTGTATGAGCTTGACGAGATACCCAATGGGCAGCAGATTGAGGCACTGCTGGTTCAACTAGGATGCCAGCCATGTGTGCCTGCTGTGTTCATTGGGCAGAAGTTAATTGGTGGTGCCAAAGAGCTCATGAGCCTGCAGGTCAGGAATGAGCTTATGCCATTGCTCATAAGTGCCAGAGCTATATGGCTCTGA

Protein sequence

MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL

Homology

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy Swiss-Prot
Match: Q9SA68 (Monothiol glutaredoxin-S1 OS=Arabidopsis thaliana OX=3702 GN=GRXS1 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 7.3e-31
Identity = 64/99 (64.65%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 6   VNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLGCQP 65
           ++ L+ +KPVVIFS++ C MS+++KSLIS YGAN TVYELDE+ NG +IE  LV+LGC+P
Sbjct: 4   ISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELGCKP 63

Query: 66  CVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
            VPAVFIGQ+L+GGA +LMSLQVRN+L  LL  A AIW+
Sbjct: 64  TVPAVFIGQELVGGANQLMSLQVRNQLASLLRRAGAIWI 102

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy Swiss-Prot
Match: Q9LYC8 (Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana OX=3702 GN=GRXS6 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.6e-28
Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 3   INAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLG 62
           + +V  LV +KPVVIFS+S C MS+++++LIS +GA  TVYELD+  NGQ+IE  LVQ+G
Sbjct: 1   MESVRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQMG 60

Query: 63  CQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
           C+P VPAVFIGQ+ IGGA ++M+LQV+N+L  +L  A AIW+
Sbjct: 61  CKPSVPAVFIGQQFIGGANQVMTLQVKNQLAAMLRRAGAIWV 102

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy Swiss-Prot
Match: Q8L8Z8 (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-26
Identity = 53/102 (51.96%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 3   INAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLG 62
           ++ +  +V E+PVVI+S+S C MS+T+K+L+  +GANP VYELDEI  G++IE  L++LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 63  CQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
           C P VP VFIG +L+GGA E+MSL +   L+P+L  A A+W+
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy Swiss-Prot
Match: O23420 (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana OX=3702 GN=GRXS5 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.0e-25
Identity = 52/96 (54.17%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 9   LVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLGCQPCVP 68
           +++EK VVIFS++ C MS+T+K+L   +G NPT+YELDEI  G++IE  L QLGC P VP
Sbjct: 7   MISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLGCSPTVP 66

Query: 69  AVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
            VFIG +L+GGA ++MSL +   L+P+L  A A+WL
Sbjct: 67  VVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy Swiss-Prot
Match: O23421 (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.8e-25
Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 9   LVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLGCQPCVP 68
           +++EK VVIFS++ C MS+T+K+L    G NPT+YELDEI  G++IE  L QLGC P VP
Sbjct: 7   MISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCSPTVP 66

Query: 69  AVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
            VFIG +L+GGA ++MSL +   L+P+L  A A+WL
Sbjct: 67  VVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Cp4.1LG17g06820 vs. NCBI nr
Match: XP_022959943.1 (monothiol glutaredoxin-S1-like [Cucurbita moschata] >XP_023004706.1 monothiol glutaredoxin-S1-like [Cucurbita maxima] >XP_023513755.1 monothiol glutaredoxin-S1-like [Cucurbita pepo subsp. pepo] >KAG6593167.1 Monothiol glutaredoxin-S1, partial [Cucurbita argyrosperma subsp. sororia] >KAG6593173.1 Monothiol glutaredoxin-S1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203 bits (516), Expect = 1.16e-65
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ
Sbjct: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 104
           LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL
Sbjct: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 104

[Close]

BLAST of Cp4.1LG17g06820 vs. NCBI nr
Match: NP_001295830.1 (monothiol glutaredoxin-S1-like [Cucumis sativus] >XP_008451626.1 PREDICTED: monothiol glutaredoxin-S1-like [Cucumis melo] >AGX01500.1 glutaredoxin [Cucumis sativus] >KAA0068041.1 monothiol glutaredoxin-S6-like [Cucumis melo var. makuwa] >TYK18087.1 monothiol glutaredoxin-S6-like [Cucumis melo var. makuwa])

HSP 1 Score: 188 bits (478), Expect = 7.27e-60
Identity = 93/103 (90.29%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MD+NAV GLVAEKPVVIFSRSQCSMSYTVK+LISS+GANPTVYELDEIPNG QIE LL+Q
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIW 103
           LGCQPCVPA+FIGQKLIGGA+ELMSLQVRNELMPLL+SARAIW
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIW 103

[Close]

BLAST of Cp4.1LG17g06820 vs. NCBI nr
Match: KAE8646328.1 (hypothetical protein Csa_016873 [Cucumis sativus])

HSP 1 Score: 188 bits (478), Expect = 2.98e-59
Identity = 93/103 (90.29%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MD+NAV GLVAEKPVVIFSRSQCSMSYTVK+LISS+GANPTVYELDEIPNG QIE LL+Q
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIW 103
           LGCQPCVPA+FIGQKLIGGA+ELMSLQVRNELMPLL+SARAIW
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIW 103

[Close]

BLAST of Cp4.1LG17g06820 vs. NCBI nr
Match: XP_038876744.1 (monothiol glutaredoxin-S1 [Benincasa hispida])

HSP 1 Score: 187 bits (476), Expect = 3.48e-59
Identity = 92/103 (89.32%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MD+NAV GLVAEKPVVIFSRSQCSMSYTVK+LISS+GANPTVYELDEIPNG+ IE LL+Q
Sbjct: 28  MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGRHIETLLIQ 87

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIW 103
           LGCQPCVPA+FIGQKLIGGA+ELMSLQVRNELMPLL+SARAIW
Sbjct: 88  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIW 130

[Close]

BLAST of Cp4.1LG17g06820 vs. NCBI nr
Match: XP_022953806.1 (monothiol glutaredoxin-S1-like [Cucurbita moschata] >XP_023548370.1 monothiol glutaredoxin-S1-like [Cucurbita pepo subsp. pepo] >KAG7014389.1 Monothiol glutaredoxin-S1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186 bits (472), Expect = 5.98e-59
Identity = 92/103 (89.32%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MD+NAV GLVAEKPVVIFSRSQCSMSYTVK+LISS+GANPTVYELDEIPNG QIE LL+Q
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIW 103
           LGC+PCVP VFIGQKLIGGA+ELMSLQVRNELMPLL+SARAIW
Sbjct: 61  LGCEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIW 103

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy TrEMBL
Match: A0A6J1KSV8 (monothiol glutaredoxin-S1-like OS=Cucurbita maxima OX=3661 GN=LOC111497922 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 5.61e-66
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ
Sbjct: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 104
           LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL
Sbjct: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 104

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy TrEMBL
Match: A0A6J1H7D6 (monothiol glutaredoxin-S1-like OS=Cucurbita moschata OX=3662 GN=LOC111460844 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 5.61e-66
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ
Sbjct: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 104
           LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL
Sbjct: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 104

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy TrEMBL
Match: U3RJA5 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX8 PE=2 SV=1)

HSP 1 Score: 188 bits (478), Expect = 3.52e-60
Identity = 93/103 (90.29%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MD+NAV GLVAEKPVVIFSRSQCSMSYTVK+LISS+GANPTVYELDEIPNG QIE LL+Q
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIW 103
           LGCQPCVPA+FIGQKLIGGA+ELMSLQVRNELMPLL+SARAIW
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIW 103

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy TrEMBL
Match: A0A5A7VQZ7 (Monothiol glutaredoxin-S6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00080 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 3.52e-60
Identity = 93/103 (90.29%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MD+NAV GLVAEKPVVIFSRSQCSMSYTVK+LISS+GANPTVYELDEIPNG QIE LL+Q
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIW 103
           LGCQPCVPA+FIGQKLIGGA+ELMSLQVRNELMPLL+SARAIW
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIW 103

[Close]

BLAST of Cp4.1LG17g06820 vs. ExPASy TrEMBL
Match: A0A1S3BS02 (monothiol glutaredoxin-S1-like OS=Cucumis melo OX=3656 GN=LOC103492859 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 3.52e-60
Identity = 93/103 (90.29%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MDINAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQ 60
           MD+NAV GLVAEKPVVIFSRSQCSMSYTVK+LISS+GANPTVYELDEIPNG QIE LL+Q
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 61  LGCQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIW 103
           LGCQPCVPA+FIGQKLIGGA+ELMSLQVRNELMPLL+SARAIW
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIW 103

[Close]

BLAST of Cp4.1LG17g06820 vs. TAIR 10
Match: AT1G03020.1 (Thioredoxin superfamily protein )

HSP 1 Score: 134.4 bits (337), Expect = 5.2e-32
Identity = 64/99 (64.65%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 6   VNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLGCQP 65
           ++ L+ +KPVVIFS++ C MS+++KSLIS YGAN TVYELDE+ NG +IE  LV+LGC+P
Sbjct: 4   ISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELGCKP 63

Query: 66  CVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
            VPAVFIGQ+L+GGA +LMSLQVRN+L  LL  A AIW+
Sbjct: 64  TVPAVFIGQELVGGANQLMSLQVRNQLASLLRRAGAIWI 102

[Close]

BLAST of Cp4.1LG17g06820 vs. TAIR 10
Match: AT3G62930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 1.8e-29
Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 3   INAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLG 62
           + +V  LV +KPVVIFS+S C MS+++++LIS +GA  TVYELD+  NGQ+IE  LVQ+G
Sbjct: 1   MESVRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQMG 60

Query: 63  CQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
           C+P VPAVFIGQ+ IGGA ++M+LQV+N+L  +L  A AIW+
Sbjct: 61  CKPSVPAVFIGQQFIGGANQVMTLQVKNQLAAMLRRAGAIWV 102

[Close]

BLAST of Cp4.1LG17g06820 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-27
Identity = 53/102 (51.96%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 3   INAVNGLVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLG 62
           ++ +  +V E+PVVI+S+S C MS+T+K+L+  +GANP VYELDEI  G++IE  L++LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 63  CQPCVPAVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
           C P VP VFIG +L+GGA E+MSL +   L+P+L  A A+W+
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Cp4.1LG17g06820 vs. TAIR 10
Match: AT4G15690.1 (Thioredoxin superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 4.2e-26
Identity = 52/96 (54.17%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 9   LVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLGCQPCVP 68
           +++EK VVIFS++ C MS+T+K+L   +G NPT+YELDEI  G++IE  L QLGC P VP
Sbjct: 7   MISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLGCSPTVP 66

Query: 69  AVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
            VFIG +L+GGA ++MSL +   L+P+L  A A+WL
Sbjct: 67  VVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Cp4.1LG17g06820 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 5.5e-26
Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 9   LVAEKPVVIFSRSQCSMSYTVKSLISSYGANPTVYELDEIPNGQQIEALLVQLGCQPCVP 68
           +++EK VVIFS++ C MS+T+K+L    G NPT+YELDEI  G++IE  L QLGC P VP
Sbjct: 7   MISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCSPTVP 66

Query: 69  AVFIGQKLIGGAKELMSLQVRNELMPLLISARAIWL 105
            VFIG +L+GGA ++MSL +   L+P+L  A A+WL
Sbjct: 67  VVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g06820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA68	7.3e-31	64.65	Monothiol glutaredoxin-S1 OS=Arabidopsis thaliana OX=3702 GN=GRXS1 PE=3 SV=1	[more]
Q9LYC8	2.6e-28	57.84	Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana OX=3702 GN=GRXS6 PE=3 SV=1	[more]
Q8L8Z8	3.2e-26	51.96	Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1	[more]
O23420	6.0e-25	54.17	Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana OX=3702 GN=GRXS5 PE=3 SV=1	[more]
O23421	7.8e-25	54.17	Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1	[more]

BLAST of Cp4.1LG17g06820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959943.1	1.16e-65	100.00	monothiol glutaredoxin-S1-like [Cucurbita moschata] >XP_023004706.1 monothiol gl...	[more]
NP_001295830.1	7.27e-60	90.29	monothiol glutaredoxin-S1-like [Cucumis sativus] >XP_008451626.1 PREDICTED: mono...	[more]
KAE8646328.1	2.98e-59	90.29	hypothetical protein Csa_016873 [Cucumis sativus]	[more]
XP_038876744.1	3.48e-59	89.32	monothiol glutaredoxin-S1 [Benincasa hispida]	[more]
XP_022953806.1	5.98e-59	89.32	monothiol glutaredoxin-S1-like [Cucurbita moschata] >XP_023548370.1 monothiol gl...	[more]

BLAST of Cp4.1LG17g06820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSV8	5.61e-66	100.00	monothiol glutaredoxin-S1-like OS=Cucurbita maxima OX=3661 GN=LOC111497922 PE=3 ...	[more]
A0A6J1H7D6	5.61e-66	100.00	monothiol glutaredoxin-S1-like OS=Cucurbita moschata OX=3662 GN=LOC111460844 PE=...	[more]
U3RJA5	3.52e-60	90.29	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX8 PE=2 SV=1	[more]
A0A5A7VQZ7	3.52e-60	90.29	Monothiol glutaredoxin-S6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BS02	3.52e-60	90.29	monothiol glutaredoxin-S1-like OS=Cucumis melo OX=3656 GN=LOC103492859 PE=3 SV=1	[more]

BLAST of Cp4.1LG17g06820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03020.1	5.2e-32	64.65	Thioredoxin superfamily protein	[more]
AT3G62930.1	1.8e-29	57.84	Thioredoxin superfamily protein	[more]
AT5G18600.1	2.2e-27	51.96	Thioredoxin superfamily protein	[more]
AT4G15690.1	4.2e-26	54.17	Thioredoxin superfamily protein	[more]
AT4G15700.1	5.5e-26	54.17	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 15..33 score: 29.61 coord: 60..73 score: 38.1 coord: 74..87 score: 34.82
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 15..77 e-value: 7.3E-10 score: 38.9
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 7..104 e-value: 1.0E-33 score: 113.2
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 4..103
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 3..101 e-value: 1.3E-26 score: 94.4
None	No IPR available	PANTHER	PTHR10168:SF200	MONOTHIOL GLUTAREDOXIN-S6	coord: 4..103
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 3..103 score: 19.596395
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 14..95 e-value: 4.35718E-35 score: 113.404
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g06820.1	Cp4.1LG17g06820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity