Cp4.1LG17g06550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
GTATAGTCCCTCGCCGTCGCCCTCATTTCAAAACGTGGTATCTGATAGTCACGATGCTCCGTTCTCCAAGGCTATATCTAGCGACGGCCGCCCGCCGATTTTCCGGCGAAGCCTACGCGGCGGCGGTGGAGAACACTACACTTGAAGCCGCCTCCGGCAGCTCTGGCACAAGCGGTGGTGGTCGAGACACGCTAGGGCGAAGGCTTATGAGCCTCGCTTTCCCCAAACGTAGCGCCGTGATTGCCATTCGCAAATGGCAAGAAGAAGGCCACACTGTTCGCAAGTACGAGCTCAATCGCATCGTTCGGGAGCTTCGCAAGCTTAAGCGCTACAAGCACGCACTCGAGATATGTGAATGGATGACTTTACAGAAAGATATGAAGCTGCTACCTGGTGATTATGCAGTTCAGCTGGATTTGATTTCAAAAATCCGCGGCCTGAGTAGTGCAGAAAAGTTTTTTGTGGATCTCCCTGATAAAATGAGAGGTCAATCTGCCTACACAGCTCTTCTTCACGTGTTTGTGCAAAATAATCTATCTGAAAAAGCTGAGGCTCTAATGGCGAAAATGTCTGAATTTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCGCGAACAAGCGACTAGAGAAGGTTCCTGCTCTGGTTCAAGAATTAAAGAAGAACACCAAACCAGATGTGGTAACATACAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGATGTTGAAGCTGCAGAAAACATTTTCCTTGAGATGAAGAACGCAAAGATCGAACCGGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAACAACAACTTACTGAAAAAGCAGCATCTACTTTGAAGAATATGGAGAAAATGGCATCTAAACGAAACAGAATTTCGTTTTCATCGCTTCTTAGCTTATATACCAATTTGGGGGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAACTCATCCTTCCGCAAGATGAATGATAGCGAGTATATGTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGAAGCTGAGAAACTCTACACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGGGTTCCAAATATATTGCTTGCAGCATATATCAACAAAAACCAAACGAAACAAGCTGAGAGTTTCTATGATCGAATGACGCTTAAAGGAATCGTACCATCTTACACTACTTGGGAGCTCCTCACATGGGGTTATCTGAAAGAGAATCAGATGGAGAAAGTGCTGCAGTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAACGCGGATGAGAGGCTGGTTAAAGGAGTGTGTAAGCGACTCGAAGAGCAGGGTAACTTCGAAGGGGCGGAGCAGCTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTATTGCGGACATATGCAAAAGCTGGTAAAATGCCACTAATAGTTGCTGAAAGAATGGAACAGGACAATGTTCAGTTGAATGAAGAGTCTCGTGAGCTTCTAAAGTTGACCAGCAAGATGTGTGTTGAACTTCCACCATGGACCGACATTGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCCGACTGGTATTACGTGAGAGCTGCATCCATGGCAAGGAAGATCTACTTGAGGGGAGGTCTTGGTGTGGGAGCATTCAAGAGGATTTATGGTGGAAGCAAGAGGAATGGTAGTCGTCCTCCACACTTCTGCGAAAGCAGCGGTGCCATCGCCCGTCACATTTTACAACAATTGCAAGAGATGAACATCGTTGATGTTGACCCAAAGGGTGGAAGGAGAATTACTTCGAGCGGACGACGGGATCTTGATCAAGTCGCTGGCCGGATTGTTGTTGCCCCTTGATCAATCAATTACATGTTTTGTTAATTAGAGACCTTATGTTTTGCCTGATGAGATACAATTTCTTATTCGTCATTAAAATTTTGGATTGAGCTGTTGAAAGATTTCCAGATGGTTTTGAATGGTCTAAAGTTCATTTACAATTCCTTTTGTTATATTTTTTCTGGGTTTTTTGCATGAAAGATGTTTCTAATATTTTATCAACAATAACTTTGATGCTTAGCCTACGAAGTTCTAGCATGGATAATGTCATTCTTCTTTGTTTGGTGCTCTCTATTTACTAAATTTTATGCGAATTTGATCTGTTCTAGAGTGAACAATGTTTGGTGGTTGGACTC2004006008001000120014001600180020002200Score = Score = Score = Score = Expect = 2.6E-62 / Score = 223.0Expect = 1.6E-45 / Score = 154.2Expect = 1.9E-56 / Score = 192.1Expect = 1.4E-10 / Score = 41.2Expect = 0.0016 / Score = 18.5Expect = 0.94 / Score = 9.9Expect = 0.016 / Score = 15.4Expect = 0.24 / Score = 11.7Expect = 0.0012 / Score = 16.8Expect = 4.8E-7 / Score = 27.5Expect = 0.0017 / Score = 16.4Score = 9.393891Score = 11.049048Expect = 3.7E-26 / Score = 94.3Expect = 1.2E-19 / Score = 72.9Score = Score = SequenceCoilCoilPTHR45717PTHR45717:SF45SM01413PF01090G3DSA:1.10.10.10PF13041PF01535TIGR00756PS51375PS51375G3DSA:1.25.40.10PS00628SSF46785
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 262..282
NoneNo IPR availableCOILSCoilCoilcoord: 482..502
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 45..502
NoneNo IPR availablePANTHERPTHR45717:SF45OS12G0527900 PROTEINcoord: 45..502
IPR001266Ribosomal protein S19eSMARTSM01413Ribosomal_S19e_2coord: 491..621
e-value: 2.6E-62
score: 223.0
IPR001266Ribosomal protein S19ePFAMPF01090Ribosomal_S19ecoord: 497..619
e-value: 1.6E-45
score: 154.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 482..621
e-value: 1.9E-56
score: 192.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 213..258
e-value: 1.4E-10
score: 41.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 359..386
e-value: 0.24
score: 11.7
coord: 286..312
e-value: 0.94
score: 9.9
coord: 323..346
e-value: 0.016
score: 15.4
coord: 148..177
e-value: 0.0016
score: 18.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 216..250
e-value: 4.8E-7
score: 27.5
coord: 148..177
e-value: 0.0012
score: 16.8
coord: 359..389
e-value: 0.0017
score: 16.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 354..388
score: 9.393891
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 214..248
score: 11.049048
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 284..436
e-value: 1.2E-19
score: 72.9
coord: 75..280
e-value: 3.7E-26
score: 94.3
IPR018277Ribosomal protein S19e, conserved sitePROSITEPS00628RIBOSOMAL_S19Ecoord: 569..588
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 499..620