Cp4.1LG17g06550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g06550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pentatricopeptide repeat-containing protein At4g02820, mitochondrial
Location	Cp4.1LG17: 6559711 .. 6564007 (-)
RNA-Seq Expression	Cp4.1LG17g06550
Synteny	Cp4.1LG17g06550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATAGTCCCTCGCCGTCGCCCTCATTTCAAAACGTGGTATCTGATAGTCACGATGCTCCGTTCTCCAAGGCTATATCTAGCGACGGCCGCCCGCCGATTTTCCGGCGAAGCCTACGCGGCGGCGGTGGAGAACACTACACTTGAAGCCGCCTCCGGCAGCTCTGGCACAAGCGGTGGTGGTCGAGACACGCTAGGGCGAAGGCTTATGAGCCTCGCTTTCCCCAAACGTAGCGCCGTGATTGCCATTCGCAAATGGCAAGAAGAAGGCCACACTGTTCGCAAGTACGAGCTCAATCGCATCGTTCGGGAGCTTCGCAAGCTTAAGCGCTACAAGCACGCACTCGAGGTATTCGATTCCCTTTTTCCTTCTTTTGTAGAACATATGTAGCGTATTTTTTCTATGAGATTATGCATTCATAGGCCTGAATGAACTTGTCTTCTACTTGTGCTATGAACTTTTACTCATAGACGAATCAGAGTCAATTCAATTCATCTGATGTCTGAGTTGCTCGTCATATCTAGCTTCAGCTTCCAAGAGAGTATCTGATGATATTAATTTTGAGGCCGAGAAATTAGGTTAAACTTATTAATATATTATCTTACATTTGGAGGGATTGGAAATTAGCTAAAGATTCTATAATATGAATCTGAAGAAATGGTTGCAAAAATGATATCACTGTGATTTTCAGGGCTCACTGCTCTAATACTAGATTAAATCAAGATTATCCAAAAACTCAGGTCGATAGATTATGGTGAAGGTGCTGAATTATAATTCCCTGACCTGGCCTCTTACTTTTGGTTCATAATCTCAAATGAATCAGGAAGATAGCCTCAAGTAATCTATCTGGAACCTTTCCACTGTGCAGATATGTGAATGGATGACTTTACAGAAAGATATGAAGCTGCTACCTGGTGATTATGCAGTTCAGCTGGATTTGATTTCAAAAATCCGCGGCCTGAGTAGTGCAGAAAAGTTTTTTGTGGATCTCCCTGATAAAATGAGAGGTCAATCTGCCTACACAGCTCTTCTTCACGTGTTTGTGCAAAATAATCTATCTGAAAAAGCTGAGGCTCTAATGGCGAAAATGTCTGAATTTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCGCGAACAAGCGACTAGAGAAGGTTCCTGCTCTGGTTCAAGAATTAAAGAAGAACACCAAACCAGATGTGGTAACATACAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGATGTTGAAGCTGCAGAAAACATTTTCCTTGAGATGAAGAACGCAAAGATCGAACCGGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAACAACAACTTACTGAAAAAGCAGCATCTACTTTGAAGAATATGGAGAAAATGGCATCTAAACGAAACAGAATTTCGTTTTCATCGCTTCTTAGCTTATATACCAATTTGGGGGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAACTCATCCTTCCGCAAGATGAATGATAGCGAGTATATGTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGAAGCTGAGAAACTCTACACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGGGTTCCAAATATATTGCTTGCAGCATATATCAACAAAAACCAAACGAAACAAGCTGAGAGTTTCTATGATCGAATGACGCTTAAAGGAATCGTACCATCTTACACTACTTGGGAGCTCCTCACATGGGGTTATCTGAAAGAGAATCAGATGGAGAAAGTGCTGCAGTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAACGCGGATGAGAGGCTGGTTAAAGGAGTGTGTAAGCGACTCGAAGAGCAGGGTAACTTCGAAGGGGCGGAGCAGCTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTATTGCGGACATATGCAAAAGCTGGTAAAATGCCACTAATAGTTGCTGAAAGAATGGAACAGGACAATGTTCAGTTGAATGAAGAGTCTCGTGAGCTTCTAAAGTTGACCAGCAAGATGTGTGTGAGTGAAGTTTCAAGCACTTTTTACCACGAAGCCCAAAAAACCAACGAAACCGATTGAACAAACTCGACCCATTCGGTTTGAAATACACTCTTAAGTTGGTTCGACAATAGCTTACCGGTTTCGCTTTCATAGAATTGGTTGTTCGGTGTTTCAATTCAATCCTTATAATTTAAGTTTAGTTTCAATTGGGTCGAGTTTAGTTTCAATTGGGTCCCTATAAATTGAGCTTAGTTTCAATTGGTCCCTATAGTTTGAGTTTAGTTCCAATTTGATCCCTTTAATTTTAAAGCATCGTTACAATTTTTTGGTTTATGCTAGTTTTCATTATAGAGACGAGAGTATAACTTAGATGTTAAGTTAATATGCAATGAATCTGATGTTTAGATGTTCAAATTCGTAACTCTGAATGTTGAATTAAAAAAACGTACTTAATTTTCATTTGATTTCCTATGATTTAATTAAATCTTATAAATATTTCTAAATTGCGATATACCCATTTTGAAAATTTGTGTATTTTCTTTTATATTTTACTAACTATAAATCCAAATAGAATAATATTAAATTAGAAGGTTCAAAATTGCATAGATTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAAATTGATATAAGGAGGGTGGGGTGTAGAATGCAGTGGAAGCAGTGAGAAAAGGGCAGGCGTAGGCATGGGAAAAAGGGGTTACGTGCCGCAATAAAGGGCACCCACCCCTCCTTTGAGGCCGCCAAGTGTCCCTGCTCCATCACTACCGACATCTCTTCCTCCTGCCTTTCTTTATGCTCACTCTCTCCCACCTTTTGTCACTTTCCCCCTTCTCTTCTTCCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTAACCTTAATAGGCTGTTAGATTATCTGCTCGTGCATTGAATATGCCTCTTCTGTGAATAATTTGTGGGTTGTGACTGTTTCTTGGATCCTATACAATGTAGACATGTTCTCACTTTAGGATTCCTAATGTTCGACAGAGCTAACTAGTCTATATGATTTTTCGGCCATAAGTTAGAATTTTATAATATCCACGAATAAGAACATTTTATGTCAGTCTTTTTTCGAACTCCCTGGTTTGGATTATCCGTTTTAGTTCCCCATTTTACGATACTTCACTGGTTAATCGAATGGTGGTCTACGTGGCTTACAATTCTTATACAATGCATAATTACGAGCAGGTTGAACTTCCACCATGGACCGACATTGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCCGACTGGTATTACGTGAGAGCTGGTTAGTTCCCTCTTTTCATGTTTTTGACTTCCATGTGTTCGTATGAAATAAACAAAACCAACATAAAGCAATTGCTTTCATTTTGTGTTATTCTCTTGATCACTTTTTCCAAATTATGCAGCATCCATGGCAAGGAAGATCTACTTGAGGGGAGGTCTTGGTGTGGGAGCATTCAAGAGGATTTATGGTGGAAGCAAGAGGAATGGTAGTCGTCCTCCACACTTCTGCGAAAGCAGCGGTGCCATCGCCCGTCACATTTTACAACAATTGCAAGAGATGAACATCGTTGATGTTGACCCAAAGGGGTGAGTACAAAGATCCCCATAATTAGCTTAGTGATTATAACTTCTCTACTGCCTGTTATTATATGTTGCGATTTACCCTGGTTTTGAGTCATATGTTACAACATTATTATTATCTATTGATCTTCTTTTCTATCTGGATGGGTTTGCAGTGGAAGGAGAATTACTTCGAGCGGACGACGGGATCTTGATCAAGTCGCTGGCCGGATTGTTGTTGCCCCTTGATCAATCAATTACATGTTTTGTTAATTAGAGACCTTATGTTTTGCCTGATGAGATACAATTTCTTATTCGTCATTAAAATTTTGGATTGAGCTGTTGAAAGATTTCCAGATGGTTTTGAATGGTCTAAAGTTCATTTACAATTCCTTTTGTTATATTTTTTCTGGGTTTTTTGCATGAAAGATGTTTCTAATATTTTATCAACAATAACTTTGATGCTTAGCCTACGAAGTTCTAGCATGGATAATGTCATTCTTCTTTGTTTGGTGCTCTCTATTTACTAAATTTTATGCGAATTTGATCTGTTCTAGAGTGAACAATGTTTGGTGGTTGGACTC

mRNA sequence

GTATAGTCCCTCGCCGTCGCCCTCATTTCAAAACGTGGTATCTGATAGTCACGATGCTCCGTTCTCCAAGGCTATATCTAGCGACGGCCGCCCGCCGATTTTCCGGCGAAGCCTACGCGGCGGCGGTGGAGAACACTACACTTGAAGCCGCCTCCGGCAGCTCTGGCACAAGCGGTGGTGGTCGAGACACGCTAGGGCGAAGGCTTATGAGCCTCGCTTTCCCCAAACGTAGCGCCGTGATTGCCATTCGCAAATGGCAAGAAGAAGGCCACACTGTTCGCAAGTACGAGCTCAATCGCATCGTTCGGGAGCTTCGCAAGCTTAAGCGCTACAAGCACGCACTCGAGATATGTGAATGGATGACTTTACAGAAAGATATGAAGCTGCTACCTGGTGATTATGCAGTTCAGCTGGATTTGATTTCAAAAATCCGCGGCCTGAGTAGTGCAGAAAAGTTTTTTGTGGATCTCCCTGATAAAATGAGAGGTCAATCTGCCTACACAGCTCTTCTTCACGTGTTTGTGCAAAATAATCTATCTGAAAAAGCTGAGGCTCTAATGGCGAAAATGTCTGAATTTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCGCGAACAAGCGACTAGAGAAGGTTCCTGCTCTGGTTCAAGAATTAAAGAAGAACACCAAACCAGATGTGGTAACATACAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGATGTTGAAGCTGCAGAAAACATTTTCCTTGAGATGAAGAACGCAAAGATCGAACCGGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAACAACAACTTACTGAAAAAGCAGCATCTACTTTGAAGAATATGGAGAAAATGGCATCTAAACGAAACAGAATTTCGTTTTCATCGCTTCTTAGCTTATATACCAATTTGGGGGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAACTCATCCTTCCGCAAGATGAATGATAGCGAGTATATGTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGAAGCTGAGAAACTCTACACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGGGTTCCAAATATATTGCTTGCAGCATATATCAACAAAAACCAAACGAAACAAGCTGAGAGTTTCTATGATCGAATGACGCTTAAAGGAATCGTACCATCTTACACTACTTGGGAGCTCCTCACATGGGGTTATCTGAAAGAGAATCAGATGGAGAAAGTGCTGCAGTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAACGCGGATGAGAGGCTGGTTAAAGGAGTGTGTAAGCGACTCGAAGAGCAGGGTAACTTCGAAGGGGCGGAGCAGCTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTATTGCGGACATATGCAAAAGCTGGTAAAATGCCACTAATAGTTGCTGAAAGAATGGAACAGGACAATGTTCAGTTGAATGAAGAGTCTCGTGAGCTTCTAAAGTTGACCAGCAAGATGTGTGTTGAACTTCCACCATGGACCGACATTGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCCGACTGGTATTACGTGAGAGCTGCATCCATGGCAAGGAAGATCTACTTGAGGGGAGGTCTTGGTGTGGGAGCATTCAAGAGGATTTATGGTGGAAGCAAGAGGAATGGTAGTCGTCCTCCACACTTCTGCGAAAGCAGCGGTGCCATCGCCCGTCACATTTTACAACAATTGCAAGAGATGAACATCGTTGATGTTGACCCAAAGGGTGGAAGGAGAATTACTTCGAGCGGACGACGGGATCTTGATCAAGTCGCTGGCCGGATTGTTGTTGCCCCTTGATCAATCAATTACATGTTTTGTTAATTAGAGACCTTATGTTTTGCCTGATGAGATACAATTTCTTATTCGTCATTAAAATTTTGGATTGAGCTGTTGAAAGATTTCCAGATGGTTTTGAATGGTCTAAAGTTCATTTACAATTCCTTTTGTTATATTTTTTCTGGGTTTTTTGCATGAAAGATGTTTCTAATATTTTATCAACAATAACTTTGATGCTTAGCCTACGAAGTTCTAGCATGGATAATGTCATTCTTCTTTGTTTGGTGCTCTCTATTTACTAAATTTTATGCGAATTTGATCTGTTCTAGAGTGAACAATGTTTGGTGGTTGGACTC

Coding sequence (CDS)

ATGCTCCGTTCTCCAAGGCTATATCTAGCGACGGCCGCCCGCCGATTTTCCGGCGAAGCCTACGCGGCGGCGGTGGAGAACACTACACTTGAAGCCGCCTCCGGCAGCTCTGGCACAAGCGGTGGTGGTCGAGACACGCTAGGGCGAAGGCTTATGAGCCTCGCTTTCCCCAAACGTAGCGCCGTGATTGCCATTCGCAAATGGCAAGAAGAAGGCCACACTGTTCGCAAGTACGAGCTCAATCGCATCGTTCGGGAGCTTCGCAAGCTTAAGCGCTACAAGCACGCACTCGAGATATGTGAATGGATGACTTTACAGAAAGATATGAAGCTGCTACCTGGTGATTATGCAGTTCAGCTGGATTTGATTTCAAAAATCCGCGGCCTGAGTAGTGCAGAAAAGTTTTTTGTGGATCTCCCTGATAAAATGAGAGGTCAATCTGCCTACACAGCTCTTCTTCACGTGTTTGTGCAAAATAATCTATCTGAAAAAGCTGAGGCTCTAATGGCGAAAATGTCTGAATTTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACATCGCGAACAAGCGACTAGAGAAGGTTCCTGCTCTGGTTCAAGAATTAAAGAAGAACACCAAACCAGATGTGGTAACATACAATCTTTTGTTGAATGTTTGCACTTTGCAAAATGATGTTGAAGCTGCAGAAAACATTTTCCTTGAGATGAAGAACGCAAAGATCGAACCGGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAACAACAACTTACTGAAAAAGCAGCATCTACTTTGAAGAATATGGAGAAAATGGCATCTAAACGAAACAGAATTTCGTTTTCATCGCTTCTTAGCTTATATACCAATTTGGGGGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAACTCATCCTTCCGCAAGATGAATGATAGCGAGTATATGTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGAAGCTGAGAAACTCTACACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGGGTTCCAAATATATTGCTTGCAGCATATATCAACAAAAACCAAACGAAACAAGCTGAGAGTTTCTATGATCGAATGACGCTTAAAGGAATCGTACCATCTTACACTACTTGGGAGCTCCTCACATGGGGTTATCTGAAAGAGAATCAGATGGAGAAAGTGCTGCAGTTCTTCAAGAATGCTGTTGGCAGTGTGAAGAAATGGAACGCGGATGAGAGGCTGGTTAAAGGAGTGTGTAAGCGACTCGAAGAGCAGGGTAACTTCGAAGGGGCGGAGCAGCTGTTGATTATTCTTAGGAATGCTGGTCATGTGGATACTGAGATATACAATTCTCTATTGCGGACATATGCAAAAGCTGGTAAAATGCCACTAATAGTTGCTGAAAGAATGGAACAGGACAATGTTCAGTTGAATGAAGAGTCTCGTGAGCTTCTAAAGTTGACCAGCAAGATGTGTGTTGAACTTCCACCATGGACCGACATTGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCCGACTGGTATTACGTGAGAGCTGCATCCATGGCAAGGAAGATCTACTTGAGGGGAGGTCTTGGTGTGGGAGCATTCAAGAGGATTTATGGTGGAAGCAAGAGGAATGGTAGTCGTCCTCCACACTTCTGCGAAAGCAGCGGTGCCATCGCCCGTCACATTTTACAACAATTGCAAGAGATGAACATCGTTGATGTTGACCCAAAGGGTGGAAGGAGAATTACTTCGAGCGGACGACGGGATCTTGATCAAGTCGCTGGCCGGATTGTTGTTGCCCCTTGA

Protein sequence

MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQLDLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTSKMCVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPKGGRRITSSGRRDLDQVAGRIVVAP

Homology

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BLAST of Cp4.1LG17g06550 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 5.4e-174
Identity = 313/520 (60.19%), Postives = 396/520 (76.15%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSG------------TSGGGRDTLG 60
           ++RS R  LA+  R FS  A AA V+  T       SG            T  GGRDTLG
Sbjct: 6   LVRSARPTLASIHRLFSAAA-AATVDTATAPVVKPRSGGGKGGESANKKETVVGGRDTLG 65

Query: 61  RRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKD 120
            RL+SL + KRSAV+ IRKW+EEGH+VRKYELNRIVRELRK+KRYKHALEICEWM +Q+D
Sbjct: 66  GRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED 125

Query: 121 MKLLPGDYAVQLDLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEAL 180
           +KL  GDYAV LDLISKIRGL+SAEKFF D+PD+MRG +A T+LLH +VQN LS+KAEAL
Sbjct: 126 IKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEAL 185

Query: 181 MAKMSEFGFLKSPLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQ 240
             KM E GFLKS L +NHMLS++I+  + EKVP L++ELK  T PD+VTYNL L      
Sbjct: 186 FEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASG 245

Query: 241 NDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISF 300
           NDVE AE ++L+ K  K+ PDWV++S L NLY+K    EKA   LK MEK+ SK+NR+++
Sbjct: 246 NDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAY 305

Query: 301 SSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWES 360
           +SL+SL+ NLGDKDGV   WKK+ SSF+KMND+EY+ MIS++VKL + E+A+ LY EWES
Sbjct: 306 ASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWES 365

Query: 361 VSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEK 420
           VSGTGD R+PN++LA Y+N+++    E FY+R+  KGI PSY+TWE+LTW YLK   MEK
Sbjct: 366 VSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEK 425

Query: 421 VLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLL 480
           VL  F  A+ SVKKW  + RLVKG CK LEEQGN +GAE+L+ +L+ AG+V+T++YNSLL
Sbjct: 426 VLDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 485

Query: 481 RTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTSKMCV 509
           RTYAKAG+M LIV ERM +DNV+L+EE++EL++LTS+M V
Sbjct: 486 RTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRV 524

[Close]

BLAST of Cp4.1LG17g06550 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 6.0e-72
Identity = 150/425 (35.29%), Postives = 250/425 (58.82%), Query Frame = 0


Query: 49  RRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKD 108
           +++  +  P+  A   + +W++ G  + K+EL R+V+ELRK KR   ALE+ +WM  + +
Sbjct: 71  KKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGE 130

Query: 109 -MKLLPGDYAVQLDLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEA 168
             +L   D A+QLDLI K+RG+  AE+FF+ LP+  + +  Y +LL+ +V+    EKAEA
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 169 LMAKMSEFGFLKSPLSFNHMLSLHIANKRLEKVPALVQELK-KNTKPDVVTYNLLLNVCT 228
           L+  M + G+   PL FN M++L++  +  +KV A+V E+K K+ + D+ +YN+ L+ C 
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 229 LQNDVEAAENIFLEMK-NAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNR 288
               VE  E ++ +MK +  I P+W +FST+A +Y K   TEKA   L+ +E   + RNR
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 289 ISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTE 348
           I +  LLSLY +LG+K  + R+W    S    + +  Y  ++SSLV++  +E AEK+Y E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 349 WESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQ 408
           W  V  + D R+PN+L+ AY+  +Q + AE  +D M   G  PS +TWE+L  G+ ++  
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 409 MEKVLQFFKNAVGS--VKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEI 468
           + + L   +NA  +     W     ++ G  K  EE+ +    E +L +LR +G ++ + 
Sbjct: 431 ISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKS 490

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BLAST of Cp4.1LG17g06550 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.2e-69
Identity = 168/490 (34.29%), Postives = 267/490 (54.49%), Query Frame = 0


Query: 9   LATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRSAVIAIRKW 68
           +A A  RF+       V       A GS  +S   R++L + ++    P+RS    +++ 
Sbjct: 6   VAVAKTRFN---TTGVVSRLVSSLADGSDTSSVANRNSL-KEILRKNGPRRSVTSLLQER 65

Query: 69  QEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQLDLISKIRG 128
            + GH V   EL  I + L +  RY  AL++ EWM  QKD++    D A++LDLI K  G
Sbjct: 66  IDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHG 125

Query: 129 LSSAEKFFVDL---PDKMR-GQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSF 188
           L   E++F  L      MR  +SAY  LL  +V+N + ++AEALM K++  GFL +P  F
Sbjct: 126 LKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPF 185

Query: 189 NHMLSLHIANKRLEKVPALVQELKKNTKP-DVVTYNLLLNVCTLQNDVEAAENIFLEMKN 248
           N M+ L+ A+ + EKV  +V  +K N  P +V++YNL +N C   + V A E ++ EM  
Sbjct: 186 NEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVG 245

Query: 249 AK-IEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGDKD 308
            K +E  W S  TLAN+Y K    EKA   L++ EKM ++ NR+ +  L++LY +LG+K+
Sbjct: 246 DKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKE 305

Query: 309 GVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILL 368
           GV R+W+   S   +++   Y+C++SSLVK   LEEAE++++EWE+     D RV N+LL
Sbjct: 306 GVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLL 365

Query: 369 AAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSVKK 428
            AY+   + ++AES +  +  +G  P+Y TWE+L  G++K   MEK +         +++
Sbjct: 366 GAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRR 425

Query: 429 --WNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 488
             W     +V  + +  E++   E A   +  L   G     +Y  LLR +  A +    
Sbjct: 426 CHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYD 485

Query: 489 VAERMEQDNV 491
           + E M+ D +
Sbjct: 486 IYEMMKLDKL 491

[Close]

BLAST of Cp4.1LG17g06550 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.2e-65
Identity = 144/438 (32.88%), Postives = 246/438 (56.16%), Query Frame = 0


Query: 75  VRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQLDLISKIRGLSSAEK 134
           V K+E+   +++LR    Y  AL++ E M  ++ M     D A+ LDL++K R +++ E 
Sbjct: 53  VFKWEVGDTIKKLRNRGLYYPALKLSEVME-ERGMNKTVSDQAIHLDLVAKAREITAGEN 112

Query: 135 FFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSFNHMLSLHIAN 194
           +FVDLP+  + +  Y +LL+ + +  L+EKAE L+ KM E     S +S+N +++L+   
Sbjct: 113 YFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKT 172

Query: 195 KRLEKVPALVQELK-KNTKPDVVTYNLLLNVCTLQNDVEAAENIFLEM-KNAKIEPDWVS 254
              EKVPA++QELK +N  PD  TYN+ +      ND+   E +  EM ++ ++ PDW +
Sbjct: 173 GETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTT 232

Query: 255 FSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMN 314
           +S +A++Y    L++KA   L+ +E   ++R+  ++  L++LY  LG    V RIW+ + 
Sbjct: 233 YSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR 292

Query: 315 SSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQTK 374
            +  K ++  Y+ MI  LVKL+ L  AE L+ EW++   T D R+ N+L+ AY  +   +
Sbjct: 293 LAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQ 352

Query: 375 QAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAV----GSVKKWNADER 434
           +A    ++   +G   +  TWE+    Y+K   M + L+    AV    G   KW     
Sbjct: 353 KANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPE 412

Query: 435 LVKGVCKRLEEQGNFEGAEQLLIILRN-AGHVDTEIYNSLLRTYAKAGKMPLIVAERMEQ 494
            V+ +    E++ +  GAE LL IL+N   ++  EI+  L+RTYA AGK    +  R++ 
Sbjct: 413 TVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKM 472

Query: 495 DNVQLNEESRELLKLTSK 506
           +NV++NE +++LL   S+
Sbjct: 473 ENVEVNEATKKLLDEVSQ 489

[Close]

BLAST of Cp4.1LG17g06550 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-62
Identity = 144/435 (33.10%), Postives = 238/435 (54.71%), Query Frame = 0


Query: 45  DTLGRRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMT 104
           DTL RR+     P  S +  +  W ++G+ V+  EL+ I++ LRK  R+ HAL+I +WM+
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 105 LQKDMKLLPGDYAVQLDLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEK 164
             +  ++  GD A++LDLI+K+ GL  AEKFF  +P + R    Y ALL+ +    +  K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 165 AEALMAKMSEFGFLKSPLSFNHMLSLHIANKRLEKVPALVQELKKNT-KPDVVTYNLLLN 224
           AE +  +M E GFLK  L +N ML+L++   +   V  L++E++  T KPD+ T N  L+
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 225 VCTLQNDVEAAENIFLEMK-NAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMA-S 284
             ++ +DVE  E   +  + +  +  DW +++  AN Y K  LTEKA   L+  E+M  +
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277

Query: 285 KRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEK 344
           ++ + ++  L+S Y   G K+ V R+W  +        ++ Y+ +IS+L+K+D +EE EK
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEK 337

Query: 345 LYTEWESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYL 404
           +  EWE+     D R+P++L+  Y  K   ++AE   + +  K  V   +TWE L  GY 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 397

Query: 405 KENQMEKVLQFFKNAVGSVKK-WNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVD 464
              +MEK ++ +K A+   K  W   + ++      LE Q + EG  ++L +L   GH+ 
Sbjct: 398 MAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS 457

Query: 465 TEIYNSLLRTYAKAG 476
              Y+ LL     AG
Sbjct: 458 ---YDQLLYDMNGAG 468

[Close]

BLAST of Cp4.1LG17g06550 vs. NCBI nr
Match: KAG6593129.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1162 bits (3005), Expect = 0.0
Identity = 608/684 (88.89%), Postives = 613/684 (89.62%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           MLRSPRLYLATAARRFSGEA A AVENTTLEAASGSSGT GGGRDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEACAVAVENTTLEAASGSSGTGGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120
           AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAV L
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVHL 120

Query: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLISKIRGLSSAEKFF+DLPDKMRGQSAYT+LLHVFVQNNLSEKAEALMAKMSEFGFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PLSFNHMLSL+I NK LEKVPALVQELKKNTKPDV+TYNLLLNVCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLYITNKGLEKVPALVQELKKNTKPDVLTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300
           MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLK MEKMASKRNRISFSSLLSLYTN GD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNFGD 300

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKMNSSFRKMNDSEY CMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYTCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           KKWNADERLV+GVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVEGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEQDNVQLNEESRELLKLTSKMC--------------------------------- 540
           VAERMEQDNVQLNEESRELLKLTSKMC                                 
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTSKMCAAYQSSKTLEFEKGGSPSSAIGAFAGLCSLNST 540

Query: 541 -----------------------------VELPPWTDIVKTARFKELAPYDPDWYYVRAA 600
                                        VELPPWTDIVKTARFKELAPYDPDWYYVRAA
Sbjct: 541 AMATARTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAA 600

Query: 601 SMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPK 622
           SMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPK
Sbjct: 601 SMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQEMNIVDVDPK 660

[Close]

BLAST of Cp4.1LG17g06550 vs. NCBI nr
Match: XP_023515289.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 984 bits (2543), Expect = 0.0
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120
           AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120

Query: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS
Sbjct: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300
           MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508
           VAERMEQDNVQLNEESRELLKLTSKMCV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508

[Close]

BLAST of Cp4.1LG17g06550 vs. NCBI nr
Match: XP_022960480.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucurbita moschata])

HSP 1 Score: 966 bits (2497), Expect = 0.0
Identity = 497/508 (97.83%), Postives = 501/508 (98.62%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           MLRSPRLYLATAARRFSGEA A AVENTTLEAASGSSGT GGGRDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEACAVAVENTTLEAASGSSGTGGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120
           AVIAIRKWQEEGHTVRKY+LNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAV L
Sbjct: 61  AVIAIRKWQEEGHTVRKYDLNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVHL 120

Query: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLISKIRGLSSAEKFF+DLPDKMRGQSAYT+LLHVFVQNNLSEKAEALMAKMSEFGFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLHI NKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300
           MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLK MEKMASKRNRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYINKNQTKQAESFYDRMTLKGI+PSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           KKWN DERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNVDERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508
           VAERMEQDNVQLNEESRELLKLTSKMCV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508

[Close]

BLAST of Cp4.1LG17g06550 vs. NCBI nr
Match: KAG7027261.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 964 bits (2493), Expect = 0.0
Identity = 498/508 (98.03%), Postives = 501/508 (98.62%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           MLRSPRLYLATAARRFSGEA A AVENTTLEAASGSSGT GGGRDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEACAVAVENTTLEAASGSSGTGGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120
           AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAV L
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVHL 120

Query: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLISKIRGLSSAEKFF+DLPDKMRGQSAYT+LLHVFVQNNLSEKAEALMAKMSEFGFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PLSFNHMLSL+I NKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLYITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300
           MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLK MEKMASKRNRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKMNSSFRKMNDSEY CMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYTCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508
           VAERMEQDNVQLNEESRELLKLTSKMCV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508

[Close]

BLAST of Cp4.1LG17g06550 vs. NCBI nr
Match: XP_023004520.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucurbita maxima])

HSP 1 Score: 959 bits (2479), Expect = 0.0
Identity = 494/508 (97.24%), Postives = 500/508 (98.43%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           M RS RLYLATAARRFSGEAYAAAVENT LEAASGSSGTSGGGRDTLGRRLMSLAFPKRS
Sbjct: 1   MHRSSRLYLATAARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120
           AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQK+MKLLPGDYAV L
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHL 120

Query: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLISKIRGLSSAEKFF+DLPDKMRGQSAYT+LLHVFVQNNLSEKAEALMAKMSEFGFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLHI NKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300
           MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLK MEKMASKRNRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLE+AEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYINKNQ KQAESFYDRMTLKGI+PSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV
Sbjct: 361 LLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           KKWNADERLVKGVCKRLEEQGNFEG EQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508
           VAERMEQDNVQLNEESRELLKLT+KMCV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTTKMCV 508

[Close]

BLAST of Cp4.1LG17g06550 vs. ExPASy TrEMBL
Match: A0A6J1H967 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111461204 PE=4 SV=1)

HSP 1 Score: 966 bits (2497), Expect = 0.0
Identity = 497/508 (97.83%), Postives = 501/508 (98.62%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           MLRSPRLYLATAARRFSGEA A AVENTTLEAASGSSGT GGGRDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEACAVAVENTTLEAASGSSGTGGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120
           AVIAIRKWQEEGHTVRKY+LNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAV L
Sbjct: 61  AVIAIRKWQEEGHTVRKYDLNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVHL 120

Query: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLISKIRGLSSAEKFF+DLPDKMRGQSAYT+LLHVFVQNNLSEKAEALMAKMSEFGFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLHI NKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300
           MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLK MEKMASKRNRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYINKNQTKQAESFYDRMTLKGI+PSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           KKWN DERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNVDERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508
           VAERMEQDNVQLNEESRELLKLTSKMCV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508

[Close]

BLAST of Cp4.1LG17g06550 vs. ExPASy TrEMBL
Match: A0A6J1KUT7 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111497797 PE=4 SV=1)

HSP 1 Score: 959 bits (2479), Expect = 0.0
Identity = 494/508 (97.24%), Postives = 500/508 (98.43%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           M RS RLYLATAARRFSGEAYAAAVENT LEAASGSSGTSGGGRDTLGRRLMSLAFPKRS
Sbjct: 1   MHRSSRLYLATAARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120
           AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQK+MKLLPGDYAV L
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHL 120

Query: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLISKIRGLSSAEKFF+DLPDKMRGQSAYT+LLHVFVQNNLSEKAEALMAKMSEFGFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLHI NKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300
           MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLK MEKMASKRNRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLE+AEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYINKNQ KQAESFYDRMTLKGI+PSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV
Sbjct: 361 LLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           KKWNADERLVKGVCKRLEEQGNFEG EQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508
           VAERMEQDNVQLNEESRELLKLT+KMCV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTTKMCV 508

[Close]

BLAST of Cp4.1LG17g06550 vs. ExPASy TrEMBL
Match: A0A6J1DB09 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018472 PE=4 SV=1)

HSP 1 Score: 858 bits (2216), Expect = 1.97e-309
Identity = 442/508 (87.01%), Postives = 475/508 (93.50%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           MLRS R  LATAARRFSGEA+ AAVENT +E  SGSSG  GGGRDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSLRTSLATAARRFSGEAFMAAVENTAIEGGSGSSG-GGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120
           AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEW T QKDMKLLPGDYAV L
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWTTSQKDMKLLPGDYAVHL 120

Query: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180
           DLI+KIRGL+SAEKFF DLPDKMRGQSA TALLHV+VQNNLS+KAEALM KMSE GFLKS
Sbjct: 121 DLIAKIRGLNSAEKFFEDLPDKMRGQSACTALLHVYVQNNLSDKAEALMEKMSECGFLKS 180

Query: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLHI+NK+L+KVPAL+Q+L+KNTKPDVVTYNLLLNVCTLQNDVEAAENI LE
Sbjct: 181 PLSFNHMLSLHISNKQLDKVPALIQDLQKNTKPDVVTYNLLLNVCTLQNDVEAAENILLE 240

Query: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300
           MK  KIE DWV+ STL NLYSK+QLTEKAASTLK MEKMASKRNRI+FSSLLSLYTNLGD
Sbjct: 241 MKKMKIERDWVTLSTLTNLYSKKQLTEKAASTLKEMEKMASKRNRITFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDG  RIWKKM +SFRKM+DSEY CMISS+VKL +LEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGAWRIWKKMKTSFRKMSDSEYTCMISSVVKLHELEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420
           LLAAYIN NQ +QAESFY+RM+LKGIVPSYTTWELLTWGYLKENQMEKVL FFKNAVGSV
Sbjct: 361 LLAAYINNNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGSV 420

Query: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480
           KKWNADERLVK VCK+LEE+GN EGAE+LLI+LRNAGHV+TEIYNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVKQVCKKLEEEGNIEGAEKLLIVLRNAGHVNTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEQDNVQLNEESRELLKLTSKMCV 508
           VAERME+D+V+L+EE+REL+KLTSKMCV
Sbjct: 481 VAERMEKDDVKLDEETRELIKLTSKMCV 507

[Close]

BLAST of Cp4.1LG17g06550 vs. ExPASy TrEMBL
Match: A0A6J1D809 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018472 PE=4 SV=1)

HSP 1 Score: 845 bits (2184), Expect = 3.19e-304
Identity = 442/529 (83.55%), Postives = 475/529 (89.79%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60
           MLRS R  LATAARRFSGEA+ AAVENT +E  SGSSG  GGGRDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSLRTSLATAARRFSGEAFMAAVENTAIEGGSGSSG-GGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALE---------------------I 120
           AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALE                     I
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEDYLVARPHNDPTSRKLQRNKYI 120

Query: 121 CEWMTLQKDMKLLPGDYAVQLDLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQN 180
           CEW T QKDMKLLPGDYAV LDLI+KIRGL+SAEKFF DLPDKMRGQSA TALLHV+VQN
Sbjct: 121 CEWTTSQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRGQSACTALLHVYVQN 180

Query: 181 NLSEKAEALMAKMSEFGFLKSPLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYN 240
           NLS+KAEALM KMSE GFLKSPLSFNHMLSLHI+NK+L+KVPAL+Q+L+KNTKPDVVTYN
Sbjct: 181 NLSDKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLDKVPALIQDLQKNTKPDVVTYN 240

Query: 241 LLLNVCTLQNDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKM 300
           LLLNVCTLQNDVEAAENI LEMK  KIE DWV+ STL NLYSK+QLTEKAASTLK MEKM
Sbjct: 241 LLLNVCTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKAASTLKEMEKM 300

Query: 301 ASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEA 360
           ASKRNRI+FSSLLSLYTNLGDKDG  RIWKKM +SFRKM+DSEY CMISS+VKL +LEEA
Sbjct: 301 ASKRNRITFSSLLSLYTNLGDKDGAWRIWKKMKTSFRKMSDSEYTCMISSVVKLHELEEA 360

Query: 361 EKLYTEWESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWG 420
           EKLYTEWESVSGTGDTRVPNILLAAYIN NQ +QAESFY+RM+LKGIVPSYTTWELLTWG
Sbjct: 361 EKLYTEWESVSGTGDTRVPNILLAAYINNNQMEQAESFYNRMSLKGIVPSYTTWELLTWG 420

Query: 421 YLKENQMEKVLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHV 480
           YLKENQMEKVL FFKNAVGSVKKWNADERLVK VCK+LEE+GN EGAE+LLI+LRNAGHV
Sbjct: 421 YLKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEGAEKLLIVLRNAGHV 480

Query: 481 DTEIYNSLLRTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTSKMCV 508
           +TEIYNSLLRTYAKAGKMPLIVAERME+D+V+L+EE+REL+KLTSKMCV
Sbjct: 481 NTEIYNSLLRTYAKAGKMPLIVAERMEKDDVKLDEETRELIKLTSKMCV 528

[Close]

BLAST of Cp4.1LG17g06550 vs. ExPASy TrEMBL
Match: A0A5D3D4M6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2032G00090 PE=4 SV=1)

HSP 1 Score: 841 bits (2173), Expect = 8.59e-303
Identity = 432/511 (84.54%), Postives = 470/511 (91.98%), Query Frame = 0


Query: 1   MLRSPRLYLATAA-RRFSGEAYAAAVENTTLEAASGSSGTS--GGGRDTLGRRLMSLAFP 60
           M RS R  LATAA RRFSGEA  AA ENT++E  +G+   S  GGGRDTLGRRLMSL FP
Sbjct: 1   MFRSFRSSLATAAARRFSGEACVAAAENTSVEGGAGTGVVSRKGGGRDTLGRRLMSLTFP 60

Query: 61  KRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYA 120
           KRSAVIAIRKWQEEGHT+RKYELN IVRELRKLKRYKHALE+CEWMTLQKDMKLLPGDYA
Sbjct: 61  KRSAVIAIRKWQEEGHTIRKYELNHIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYA 120

Query: 121 VQLDLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGF 180
           VQLDLI+KIRGL+SAEKFF DLPDK+R QS  TALLH +VQ NLSEKAEALM KMSE GF
Sbjct: 121 VQLDLIAKIRGLNSAEKFFEDLPDKIREQSVCTALLHAYVQKNLSEKAEALMEKMSECGF 180

Query: 181 LKSPLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENI 240
           LKSPLSFNHMLSLHI+NK+LEKVPAL++ LKKNTKPDVVTYNLLLNVCTLQND EAAENI
Sbjct: 181 LKSPLSFNHMLSLHISNKQLEKVPALIEVLKKNTKPDVVTYNLLLNVCTLQNDAEAAENI 240

Query: 241 FLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTN 300
           FLEMK  K++PDW+SFSTLANLY K+QLTEKAA+TLK MEKMA KRNR+SFSSLLSLYTN
Sbjct: 241 FLEMKKTKVQPDWLSFSTLANLYCKKQLTEKAAATLKEMEKMAFKRNRLSFSSLLSLYTN 300

Query: 301 LGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRV 360
           LGDK+ V RIWKK+ SSFRKM+DSEYMCM+SSLVKL++LEEAEKLYTEWESVSGT DTR+
Sbjct: 301 LGDKNEVRRIWKKLKSSFRKMSDSEYMCMVSSLVKLNELEEAEKLYTEWESVSGTRDTRI 360

Query: 361 PNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAV 420
            N++LAAYINKNQ +QAESFY+RM+LKGIVPSYTTWELLTWGYLKENQMEKVL FFKNAV
Sbjct: 361 SNVMLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV 420

Query: 421 GSVKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKM 480
           GSVKKWNADERLVKGVCK+LEEQGN EG EQLL+ILRNAGHVDTEIYNSLLRTYAKAGKM
Sbjct: 421 GSVKKWNADERLVKGVCKKLEEQGNIEGVEQLLVILRNAGHVDTEIYNSLLRTYAKAGKM 480

Query: 481 PLIVAERMEQDNVQLNEESRELLKLTSKMCV 508
           PLIVAERME+DNVQLN+E+RELL+LTSKMCV
Sbjct: 481 PLIVAERMEKDNVQLNDETRELLRLTSKMCV 511

[Close]

BLAST of Cp4.1LG17g06550 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 612.5 bits (1578), Expect = 3.9e-175
Identity = 313/520 (60.19%), Postives = 396/520 (76.15%), Query Frame = 0


Query: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSG------------TSGGGRDTLG 60
           ++RS R  LA+  R FS  A AA V+  T       SG            T  GGRDTLG
Sbjct: 6   LVRSARPTLASIHRLFSAAA-AATVDTATAPVVKPRSGGGKGGESANKKETVVGGRDTLG 65

Query: 61  RRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKD 120
            RL+SL + KRSAV+ IRKW+EEGH+VRKYELNRIVRELRK+KRYKHALEICEWM +Q+D
Sbjct: 66  GRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED 125

Query: 121 MKLLPGDYAVQLDLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEAL 180
           +KL  GDYAV LDLISKIRGL+SAEKFF D+PD+MRG +A T+LLH +VQN LS+KAEAL
Sbjct: 126 IKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEAL 185

Query: 181 MAKMSEFGFLKSPLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQ 240
             KM E GFLKS L +NHMLS++I+  + EKVP L++ELK  T PD+VTYNL L      
Sbjct: 186 FEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASG 245

Query: 241 NDVEAAENIFLEMKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISF 300
           NDVE AE ++L+ K  K+ PDWV++S L NLY+K    EKA   LK MEK+ SK+NR+++
Sbjct: 246 NDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAY 305

Query: 301 SSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWES 360
           +SL+SL+ NLGDKDGV   WKK+ SSF+KMND+EY+ MIS++VKL + E+A+ LY EWES
Sbjct: 306 ASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWES 365

Query: 361 VSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEK 420
           VSGTGD R+PN++LA Y+N+++    E FY+R+  KGI PSY+TWE+LTW YLK   MEK
Sbjct: 366 VSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEK 425

Query: 421 VLQFFKNAVGSVKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLL 480
           VL  F  A+ SVKKW  + RLVKG CK LEEQGN +GAE+L+ +L+ AG+V+T++YNSLL
Sbjct: 426 VLDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 485

Query: 481 RTYAKAGKMPLIVAERMEQDNVQLNEESRELLKLTSKMCV 509
           RTYAKAG+M LIV ERM +DNV+L+EE++EL++LTS+M V
Sbjct: 486 RTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRV 524

[Close]

BLAST of Cp4.1LG17g06550 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 273.5 bits (698), Expect = 4.3e-73
Identity = 150/425 (35.29%), Postives = 250/425 (58.82%), Query Frame = 0


Query: 49  RRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKD 108
           +++  +  P+  A   + +W++ G  + K+EL R+V+ELRK KR   ALE+ +WM  + +
Sbjct: 71  KKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGE 130

Query: 109 -MKLLPGDYAVQLDLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEA 168
             +L   D A+QLDLI K+RG+  AE+FF+ LP+  + +  Y +LL+ +V+    EKAEA
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 169 LMAKMSEFGFLKSPLSFNHMLSLHIANKRLEKVPALVQELK-KNTKPDVVTYNLLLNVCT 228
           L+  M + G+   PL FN M++L++  +  +KV A+V E+K K+ + D+ +YN+ L+ C 
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 229 LQNDVEAAENIFLEMK-NAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNR 288
               VE  E ++ +MK +  I P+W +FST+A +Y K   TEKA   L+ +E   + RNR
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 289 ISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTE 348
           I +  LLSLY +LG+K  + R+W    S    + +  Y  ++SSLV++  +E AEK+Y E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 349 WESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQ 408
           W  V  + D R+PN+L+ AY+  +Q + AE  +D M   G  PS +TWE+L  G+ ++  
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 409 MEKVLQFFKNAVGS--VKKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEI 468
           + + L   +NA  +     W     ++ G  K  EE+ +    E +L +LR +G ++ + 
Sbjct: 431 ISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKS 490

[Close]

BLAST of Cp4.1LG17g06550 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 263.5 bits (672), Expect = 4.4e-70
Identity = 168/490 (34.29%), Postives = 267/490 (54.49%), Query Frame = 0


Query: 9   LATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRSAVIAIRKW 68
           +A A  RF+       V       A GS  +S   R++L + ++    P+RS    +++ 
Sbjct: 6   VAVAKTRFN---TTGVVSRLVSSLADGSDTSSVANRNSL-KEILRKNGPRRSVTSLLQER 65

Query: 69  QEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQLDLISKIRG 128
            + GH V   EL  I + L +  RY  AL++ EWM  QKD++    D A++LDLI K  G
Sbjct: 66  IDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHG 125

Query: 129 LSSAEKFFVDL---PDKMR-GQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSF 188
           L   E++F  L      MR  +SAY  LL  +V+N + ++AEALM K++  GFL +P  F
Sbjct: 126 LKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPF 185

Query: 189 NHMLSLHIANKRLEKVPALVQELKKNTKP-DVVTYNLLLNVCTLQNDVEAAENIFLEMKN 248
           N M+ L+ A+ + EKV  +V  +K N  P +V++YNL +N C   + V A E ++ EM  
Sbjct: 186 NEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVG 245

Query: 249 AK-IEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGDKD 308
            K +E  W S  TLAN+Y K    EKA   L++ EKM ++ NR+ +  L++LY +LG+K+
Sbjct: 246 DKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKE 305

Query: 309 GVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILL 368
           GV R+W+   S   +++   Y+C++SSLVK   LEEAE++++EWE+     D RV N+LL
Sbjct: 306 GVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLL 365

Query: 369 AAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSVKK 428
            AY+   + ++AES +  +  +G  P+Y TWE+L  G++K   MEK +         +++
Sbjct: 366 GAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRR 425

Query: 429 --WNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 488
             W     +V  + +  E++   E A   +  L   G     +Y  LLR +  A +    
Sbjct: 426 CHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYD 485

Query: 489 VAERMEQDNV 491
           + E M+ D +
Sbjct: 486 IYEMMKLDKL 491

[Close]

BLAST of Cp4.1LG17g06550 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 251.1 bits (640), Expect = 2.3e-66
Identity = 144/438 (32.88%), Postives = 246/438 (56.16%), Query Frame = 0


Query: 75  VRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQLDLISKIRGLSSAEK 134
           V K+E+   +++LR    Y  AL++ E M  ++ M     D A+ LDL++K R +++ E 
Sbjct: 53  VFKWEVGDTIKKLRNRGLYYPALKLSEVME-ERGMNKTVSDQAIHLDLVAKAREITAGEN 112

Query: 135 FFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKSPLSFNHMLSLHIAN 194
           +FVDLP+  + +  Y +LL+ + +  L+EKAE L+ KM E     S +S+N +++L+   
Sbjct: 113 YFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKT 172

Query: 195 KRLEKVPALVQELK-KNTKPDVVTYNLLLNVCTLQNDVEAAENIFLEM-KNAKIEPDWVS 254
              EKVPA++QELK +N  PD  TYN+ +      ND+   E +  EM ++ ++ PDW +
Sbjct: 173 GETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTT 232

Query: 255 FSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGDKDGVCRIWKKMN 314
           +S +A++Y    L++KA   L+ +E   ++R+  ++  L++LY  LG    V RIW+ + 
Sbjct: 233 YSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR 292

Query: 315 SSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQTK 374
            +  K ++  Y+ MI  LVKL+ L  AE L+ EW++   T D R+ N+L+ AY  +   +
Sbjct: 293 LAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQ 352

Query: 375 QAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAV----GSVKKWNADER 434
           +A    ++   +G   +  TWE+    Y+K   M + L+    AV    G   KW     
Sbjct: 353 KANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPE 412

Query: 435 LVKGVCKRLEEQGNFEGAEQLLIILRN-AGHVDTEIYNSLLRTYAKAGKMPLIVAERMEQ 494
            V+ +    E++ +  GAE LL IL+N   ++  EI+  L+RTYA AGK    +  R++ 
Sbjct: 413 TVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKM 472

Query: 495 DNVQLNEESRELLKLTSK 506
           +NV++NE +++LL   S+
Sbjct: 473 ENVEVNEATKKLLDEVSQ 489

[Close]

BLAST of Cp4.1LG17g06550 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-63
Identity = 144/435 (33.10%), Postives = 238/435 (54.71%), Query Frame = 0


Query: 45  DTLGRRLMSLAFPKRSAVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMT 104
           DTL RR+     P  S +  +  W ++G+ V+  EL+ I++ LRK  R+ HAL+I +WM+
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 105 LQKDMKLLPGDYAVQLDLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEK 164
             +  ++  GD A++LDLI+K+ GL  AEKFF  +P + R    Y ALL+ +    +  K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 165 AEALMAKMSEFGFLKSPLSFNHMLSLHIANKRLEKVPALVQELKKNT-KPDVVTYNLLLN 224
           AE +  +M E GFLK  L +N ML+L++   +   V  L++E++  T KPD+ T N  L+
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 225 VCTLQNDVEAAENIFLEMK-NAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMA-S 284
             ++ +DVE  E   +  + +  +  DW +++  AN Y K  LTEKA   L+  E+M  +
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277

Query: 285 KRNRISFSSLLSLYTNLGDKDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEK 344
           ++ + ++  L+S Y   G K+ V R+W  +        ++ Y+ +IS+L+K+D +EE EK
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEK 337

Query: 345 LYTEWESVSGTGDTRVPNILLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYL 404
           +  EWE+     D R+P++L+  Y  K   ++AE   + +  K  V   +TWE L  GY 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 397

Query: 405 KENQMEKVLQFFKNAVGSVKK-WNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVD 464
              +MEK ++ +K A+   K  W   + ++      LE Q + EG  ++L +L   GH+ 
Sbjct: 398 MAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS 457

Query: 465 TEIYNSLLRTYAKAG 476
              Y+ LL     AG
Sbjct: 458 ---YDQLLYDMNGAG 468

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g06550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY07	5.4e-174	60.19	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
Q8LPS6	6.0e-72	35.29	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
Q3E911	6.2e-69	34.29	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]
O22714	3.2e-65	32.88	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q9SKU6	1.5e-62	33.10	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]

BLAST of Cp4.1LG17g06550 vs. NCBI nr


Match Name	Identity	Description
KAG6593129.1	88.89	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023515289.1	100.00	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 ...	[more]
XP_022960480.1	97.83	pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucurbita ...	[more]
KAG7027261.1	98.03	Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper...	[more]
XP_023004520.1	97.24	pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucurbita ...	[more]

BLAST of Cp4.1LG17g06550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H967	0.0	97.83	pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbit...	[more]
A0A6J1KUT7	0.0	97.24	pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbit...	[more]
A0A6J1DB09	1.97e-309	87.01	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 ...	[more]
A0A6J1D809	3.19e-304	83.55	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 ...	[more]
A0A5D3D4M6	8.59e-303	84.54	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Cp4.1LG17g06550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02820.1	3.9e-175	60.19	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G02150.1	4.3e-73	35.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27460.1	4.4e-70	34.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	2.3e-66	32.88	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.1	1.1e-63	33.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 262..282
None	No IPR available	COILS	Coil	Coil	coord: 482..502
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 45..502
None	No IPR available	PANTHER	PTHR45717:SF45	OS12G0527900 PROTEIN	coord: 45..502
IPR001266	Ribosomal protein S19e	SMART	SM01413	Ribosomal_S19e_2	coord: 491..621 e-value: 2.6E-62 score: 223.0
IPR001266	Ribosomal protein S19e	PFAM	PF01090	Ribosomal_S19e	coord: 497..619 e-value: 1.6E-45 score: 154.2
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 482..621 e-value: 1.9E-56 score: 192.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 213..258 e-value: 1.4E-10 score: 41.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 359..386 e-value: 0.24 score: 11.7 coord: 286..312 e-value: 0.94 score: 9.9 coord: 323..346 e-value: 0.016 score: 15.4 coord: 148..177 e-value: 0.0016 score: 18.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 216..250 e-value: 4.8E-7 score: 27.5 coord: 148..177 e-value: 0.0012 score: 16.8 coord: 359..389 e-value: 0.0017 score: 16.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 354..388 score: 9.393891
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 214..248 score: 11.049048
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 284..436 e-value: 1.2E-19 score: 72.9 coord: 75..280 e-value: 3.7E-26 score: 94.3
IPR018277	Ribosomal protein S19e, conserved site	PROSITE	PS00628	RIBOSOMAL_S19E	coord: 569..588
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 499..620

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g06550.1	Cp4.1LG17g06550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003735	structural constituent of ribosome