CSPI05G13450.1 (mRNA) Cucumber (PI 183967) v1

Overview
NameCSPI05G13450.1
TypemRNA
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
LocationChr5: 13119959 .. 13121231 (-)
Sequence length858
RNA-Seq ExpressionCSPI05G13450.1
SyntenyCSPI05G13450.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACGCCAGAAGGCAGAACTGAATGCGAAGGTAATACAGAACGTCATAAGTTTAAAAAAGTGGAGATGTCTGTCTTCAATGGTGAAGATCCTGATTCTTGGTTATTCTGAGCCGATAGATACTTCCAAATTCATAAATTGTTGATGCCAAGAAGGTATTGGTGACGACGATCAGTTTTGAGGGTTCAACCTTGAACTGGTACAGAGCACAAGAAGAGAGGGATAAATTTATGGATTGTTCGAACTTGAAGAAATGATTGCTGATACGATTCTAATCAGTTCGCAAAGGACCCATATGTGGCCAATTTTTTAGAATTTGGCAAGAGACTACAGTAGAGGAATATCAAAATTTGTTCGACAAATTAATGGCTCCATTATCGGATTTACAGGACAGGGTGATTGAGGAAACTTTCATGAATGGGTTGCTGTCATGGATCAAGGCTGAGGTAGATTTTTGTCGAACAACCAGATTAGCCCAGATGATGCAATTAGCTCAGTCGGTGGAGAATCGGGAGATCGTCCGGGCGTAAGTCAACCTTAAAGGATATGTTGGAGGAAAATATCCAACTTCTTTAGCCAATAGTGCTAAATCTGGAGGGAGTGCCAATTCAATTGATAATAAGAGCGACTCTACAATTCCCATGAGAACTATCACCTTAAGAGGGGTGGCTGGTGGGGAAGCTAAGAAGGAGGGGCCTAGTAAGAGATTATCTGACATGGAGTTTCGAGCTAGAAAGGAGAAGGCACTCTATTTTCGATGTAACGAAAAGTACTCCCATGACCATAAATGTAAGATGAGGGAGCAAAGAGAGCTTCGAATGTATGTTGTCACAGAGGGAAAGGAGGAATTTGAGATTGTGGAGGATATGGAGAGTGAGGAGAAAGAATTGAAAATGGTGAGGATAGATGAGGAAGACCAAGCCATTATAGAATTATCCATTAATTTTGTGGTAGGATTATCGAACCCGGGTACTATGAAGGTGAGAGGGGAGATCGAAGGCAAGGAAGTGGTGCTCTTAGTAGATTGTGGGGCTACACACAACTTTATCTTTGAAAAGTTGGTGAAGAGTTTACAGATACCGACGAAAGACACTTCTCATTATGGGGTGATTTTGGGGTCCGACACAACTATTAAGGGGAAAGGAATCTGTGAAGCCGTAGAGTTGAAAATGAATGATTGGAAGGTAGTAGCGAACTTTTTACCGTTGGAGTTAGGGGGTGTGGACGTGGTCTTAGAGATGCAGTGGCTTTACTCTCTTGGCATCACATAA

mRNA sequence

ATGAAACGCCAGAAGGCAGAACTGAATGCGAAGGACAGGGTGATTGAGGAAACTTTCATGAATGGGTTGCTGTCATGGATCAAGGCTGAGGTAGATTTTTGTCGAACAACCAGATTAGCCCAGATGATGCAATTAGCTCAGTCGGTGGAGAATCGGGAGATCGTCCGGGCTGCTAAATCTGGAGGGAGTGCCAATTCAATTGATAATAAGAGCGACTCTACAATTCCCATGAGAACTATCACCTTAAGAGGGGTGGCTGGTGGGGAAGCTAAGAAGGAGGGGCCTAGTAAGAGATTATCTGACATGGAGTTTCGAGCTAGAAAGGAGAAGGCACTCTATTTTCGATGTAACGAAAAGTACTCCCATGACCATAAATGTAAGATGAGGGAGCAAAGAGAGCTTCGAATGTATGTTGTCACAGAGGGAAAGGAGGAATTTGAGATTGTGGAGGATATGGAGAGTGAGGAGAAAGAATTGAAAATGGTGAGGATAGATGAGGAAGACCAAGCCATTATAGAATTATCCATTAATTTTGTGGTAGGATTATCGAACCCGGGTACTATGAAGGTGAGAGGGGAGATCGAAGGCAAGGAAGTGGTGCTCTTAGTAGATTGTGGGGCTACACACAACTTTATCTTTGAAAAGTTGGTGAAGAGTTTACAGATACCGACGAAAGACACTTCTCATTATGGGGTGATTTTGGGGTCCGACACAACTATTAAGGGGAAAGGAATCTGTGAAGCCGTAGAGTTGAAAATGAATGATTGGAAGGTAGTAGCGAACTTTTTACCGTTGGAGTTAGGGGGTGTGGACGTGGTCTTAGAGATGCAGTGGCTTTACTCTCTTGGCATCACATAA

Coding sequence (CDS)

ATGAAACGCCAGAAGGCAGAACTGAATGCGAAGGACAGGGTGATTGAGGAAACTTTCATGAATGGGTTGCTGTCATGGATCAAGGCTGAGGTAGATTTTTGTCGAACAACCAGATTAGCCCAGATGATGCAATTAGCTCAGTCGGTGGAGAATCGGGAGATCGTCCGGGCTGCTAAATCTGGAGGGAGTGCCAATTCAATTGATAATAAGAGCGACTCTACAATTCCCATGAGAACTATCACCTTAAGAGGGGTGGCTGGTGGGGAAGCTAAGAAGGAGGGGCCTAGTAAGAGATTATCTGACATGGAGTTTCGAGCTAGAAAGGAGAAGGCACTCTATTTTCGATGTAACGAAAAGTACTCCCATGACCATAAATGTAAGATGAGGGAGCAAAGAGAGCTTCGAATGTATGTTGTCACAGAGGGAAAGGAGGAATTTGAGATTGTGGAGGATATGGAGAGTGAGGAGAAAGAATTGAAAATGGTGAGGATAGATGAGGAAGACCAAGCCATTATAGAATTATCCATTAATTTTGTGGTAGGATTATCGAACCCGGGTACTATGAAGGTGAGAGGGGAGATCGAAGGCAAGGAAGTGGTGCTCTTAGTAGATTGTGGGGCTACACACAACTTTATCTTTGAAAAGTTGGTGAAGAGTTTACAGATACCGACGAAAGACACTTCTCATTATGGGGTGATTTTGGGGTCCGACACAACTATTAAGGGGAAAGGAATCTGTGAAGCCGTAGAGTTGAAAATGAATGATTGGAAGGTAGTAGCGAACTTTTTACCGTTGGAGTTAGGGGGTGTGGACGTGGTCTTAGAGATGCAGTGGCTTTACTCTCTTGGCATCACATAA

Protein sequence

MKRQKAELNAKDRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVRAAKSGGSANSIDNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEKALYFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAIIELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGVILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT*
Homology
BLAST of CSPI05G13450.1 vs. ExPASy TrEMBL
Match: A0A5D3DLL9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002170 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.6e-91
Identity = 177/293 (60.41%), Postives = 224/293 (76.45%), Query Frame = 0

Query: 12  DRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVR-----AAKSGG---S 71
           +RVI +TFMNGLL W+++EV FCR   LA+MM++AQ VENREI R        SGG    
Sbjct: 237 ERVILDTFMNGLLPWVRSEVFFCRPKSLAEMMEVAQMVENREIARTEAKMCGYSGGKIAG 296

Query: 72  ANSI-----------DNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEKAL 131
            NS+           DNK+++  P+RTITLR     E ++EG  KRL D EF+ARKEK L
Sbjct: 297 QNSVVGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGL 356

Query: 132 YFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAII 191
            FRCNEKYS DHKC+M+EQRELRM+VVTEG+EE+EIVED E EEKEL  + I+E    ++
Sbjct: 357 CFRCNEKYSADHKCRMKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVV 416

Query: 192 ELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGV 251
           ELSIN VVGL++PGTMKVRG++ G+EVV+L+DCGATHNF+ EKLV+ L +P K+TSHYGV
Sbjct: 417 ELSINSVVGLNDPGTMKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGV 476

Query: 252 ILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           ILGS   ++GKG+CE +E+++ DWK+V +FLPLELGGVDV+L MQWLYSLG+T
Sbjct: 477 ILGSGAAVQGKGVCEKLEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVT 528

BLAST of CSPI05G13450.1 vs. ExPASy TrEMBL
Match: A0A5D3D5P9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00390 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.6e-91
Identity = 177/293 (60.41%), Postives = 224/293 (76.45%), Query Frame = 0

Query: 12  DRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVR-----AAKSGG---S 71
           +RVI +TFMNGLL W+++EV FCR   LA+MM++AQ VENREI R        SGG    
Sbjct: 465 ERVILDTFMNGLLPWVRSEVFFCRPKSLAEMMEVAQMVENREIARTEAKMCGYSGGKIAG 524

Query: 72  ANSI-----------DNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEKAL 131
            NS+           DNK+++  P+RTITLR     E ++EG  KRL D EF+ARKEK L
Sbjct: 525 QNSVVGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGL 584

Query: 132 YFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAII 191
            FRCNEKYS DHKC+M+EQRELRM+VVTEG+EE+EIVED E EEKEL  + I+E    ++
Sbjct: 585 CFRCNEKYSADHKCRMKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVV 644

Query: 192 ELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGV 251
           ELSIN VVGL++PGTMKVRG++ G+EVV+L+DCGATHNF+ EKLV+ L +P K+TSHYGV
Sbjct: 645 ELSINSVVGLNDPGTMKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGV 704

Query: 252 ILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           ILGS   ++GKG+CE +E+++ DWK+V +FLPLELGGVDV+L MQWLYSLG+T
Sbjct: 705 ILGSGAAVQGKGVCEKLEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVT 756

BLAST of CSPI05G13450.1 vs. ExPASy TrEMBL
Match: A0A5A7TET8 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002570 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 3.6e-91
Identity = 176/293 (60.07%), Postives = 224/293 (76.45%), Query Frame = 0

Query: 12  DRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVR-----AAKSGG---S 71
           +RVI +TFMNGLL W+++EV FCR   LA+MM++AQ VENREI R        SGG    
Sbjct: 237 ERVILDTFMNGLLPWVRSEVFFCRPKSLAEMMEVAQMVENREIARTEAKMCGYSGGKIAG 296

Query: 72  ANSI-----------DNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEKAL 131
            NS+           DNK+++  P+RTITLR     E ++EG  KRL D EF+ARKEK L
Sbjct: 297 QNSVVGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGL 356

Query: 132 YFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAII 191
            FRCNEKYS DH+C+M+EQRELRM+VVTEG+EE+EIVED E EEKEL  + I+E    ++
Sbjct: 357 CFRCNEKYSADHRCRMKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVV 416

Query: 192 ELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGV 251
           ELSIN VVGL++PGTMKVRG++ G+EVV+L+DCGATHNF+ EKLV+ L +P K+TSHYGV
Sbjct: 417 ELSINSVVGLNDPGTMKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGV 476

Query: 252 ILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           ILGS   ++GKG+CE +E+++ DWK+V +FLPLELGGVDV+L MQWLYSLG+T
Sbjct: 477 ILGSGAAVQGKGVCEKMEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVT 528

BLAST of CSPI05G13450.1 vs. ExPASy TrEMBL
Match: A0A5D3BLF5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002730 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 2.3e-90
Identity = 175/295 (59.32%), Postives = 227/295 (76.95%), Query Frame = 0

Query: 12  DRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVRA-------------- 71
           +RVIE+TFMNGLL W+++EV F R   LA+MM++AQ VENREIVR               
Sbjct: 208 ERVIEDTFMNGLLPWVRSEVVFYRPKGLAEMMEVAQIVENREIVRTEAKLNGYSGGRMTG 267

Query: 72  -------AKSGGSANSIDNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEK 131
                  A SGG A   ++KS+++ P+RTITLR  A  E ++EG  KRL D EF++RKEK
Sbjct: 268 QIGSNGKATSGGVAG--ESKSNTSFPIRTITLRSSAPTENRREGTYKRLPDAEFQSRKEK 327

Query: 132 ALYFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQA 191
            L FRCNEKYS DHKC+++EQRELRM+VVTEG+EE+EIVE+ E EEKEL  + ++E+   
Sbjct: 328 GLCFRCNEKYSADHKCRLKEQRELRMFVVTEGREEYEIVEE-EKEEKELGRIEVNEDITI 387

Query: 192 IIELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHY 251
           ++ELSIN VVGL++PGTMKVRG++ G+EV++L+DCGATHNF+ EKLVK L +P K+TSHY
Sbjct: 388 VVELSINSVVGLNDPGTMKVRGKLLGEEVIILIDCGATHNFVSEKLVKKLILPIKETSHY 447

Query: 252 GVILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           GVILGS   ++GKGICE +E+++N WK+V +FLPLELGGVDV+L MQWLYSLG+T
Sbjct: 448 GVILGSGAAVQGKGICEKLEVQLNGWKIVEDFLPLELGGVDVILGMQWLYSLGVT 499

BLAST of CSPI05G13450.1 vs. ExPASy TrEMBL
Match: A0A5A7U9J7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G002020 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 5.2e-90
Identity = 176/293 (60.07%), Postives = 221/293 (75.43%), Query Frame = 0

Query: 14  VIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVR----------------- 73
           VIE+TFMNGLL W+++EV FCR   LA+MM+ AQ VENREIVR                 
Sbjct: 210 VIEDTFMNGLLPWVRSEVVFCRPKSLAEMMEAAQMVENREIVRMEAKMNGYSGGKMSGQI 269

Query: 74  ----AAKSGGSANSIDNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEKAL 133
                  SGG A  I  K +++ P+RTITLR  A  E ++EG  KRL D EF+ARKEK L
Sbjct: 270 GSNGKINSGGVAGDI--KGNTSFPIRTITLRSQASTENRREGTYKRLPDAEFQARKEKGL 329

Query: 134 YFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAII 193
            FRCNEKYS DHKC+++EQRELRM+VVTEGKEE+EIVE+ E EEKEL  + ++E+   ++
Sbjct: 330 CFRCNEKYSADHKCRLKEQRELRMFVVTEGKEEYEIVEE-EKEEKELGRIEVNEDLTTVV 389

Query: 194 ELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGV 253
           ELSIN VVGL++P TMKVRG++ G+EV++L+DCGATHNF+ EKLVK L +P K+TSHYGV
Sbjct: 390 ELSINSVVGLNDPETMKVRGKLLGEEVIVLIDCGATHNFVSEKLVKKLILPIKETSHYGV 449

Query: 254 ILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           ILGS   ++GKGICE +E+++N WKVV +FLPLELGGVDV+L MQWLYSLG+T
Sbjct: 450 ILGSGAAVQGKGICEKLEVQLNGWKVVEDFLPLELGGVDVILGMQWLYSLGVT 499

BLAST of CSPI05G13450.1 vs. NCBI nr
Match: XP_031745972.1 (uncharacterized protein LOC116406393 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.6e-93
Identity = 184/294 (62.59%), Postives = 221/294 (75.17%), Query Frame = 0

Query: 11  KDRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVR-------------- 70
           +DRV+EETFMNGL  WIKAEV FC+   LA+MM  AQ VENREI+R              
Sbjct: 223 QDRVVEETFMNGLFPWIKAEVVFCKPVGLAEMMHAAQLVENREIIRKEANLNGYAKGKYP 282

Query: 71  -----AAKSGGSANSIDNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEKA 130
                  +S  + N  ++K ++  P+RT+TLR  A GE KKEGP+KRL D EF+ARKEK 
Sbjct: 283 PPNSSIIRSSAAMNHSEDKGNTIFPIRTVTLR-TATGEVKKEGPTKRLPDAEFQARKEKG 342

Query: 131 LYFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAI 190
           L FRCNEKY H H+CK REQRELRMYVV E  EE+EIVE+ E +E EL  V I+ EDQAI
Sbjct: 343 LCFRCNEKYFHGHRCKGREQRELRMYVVKE-DEEYEIVEEAEWDETELNCVEINPEDQAI 402

Query: 191 IELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYG 250
           +ELSIN VVGL+NPGTMKVRG+I+ +EV++L+DCGATHNFI +K+V+ L +PTK TSHYG
Sbjct: 403 VELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYG 462

Query: 251 VILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           VILGS   +KGKGICE +EL++  WKV ANFLPLELGGVD VLEMQWLYSLG+T
Sbjct: 463 VILGSCAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLEMQWLYSLGVT 514

BLAST of CSPI05G13450.1 vs. NCBI nr
Match: TYK18846.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 345.9 bits (886), Expect = 3.3e-91
Identity = 177/293 (60.41%), Postives = 224/293 (76.45%), Query Frame = 0

Query: 12  DRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVR-----AAKSGG---S 71
           +RVI +TFMNGLL W+++EV FCR   LA+MM++AQ VENREI R        SGG    
Sbjct: 465 ERVILDTFMNGLLPWVRSEVFFCRPKSLAEMMEVAQMVENREIARTEAKMCGYSGGKIAG 524

Query: 72  ANSI-----------DNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEKAL 131
            NS+           DNK+++  P+RTITLR     E ++EG  KRL D EF+ARKEK L
Sbjct: 525 QNSVVGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGL 584

Query: 132 YFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAII 191
            FRCNEKYS DHKC+M+EQRELRM+VVTEG+EE+EIVED E EEKEL  + I+E    ++
Sbjct: 585 CFRCNEKYSADHKCRMKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVV 644

Query: 192 ELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGV 251
           ELSIN VVGL++PGTMKVRG++ G+EVV+L+DCGATHNF+ EKLV+ L +P K+TSHYGV
Sbjct: 645 ELSINSVVGLNDPGTMKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGV 704

Query: 252 ILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           ILGS   ++GKG+CE +E+++ DWK+V +FLPLELGGVDV+L MQWLYSLG+T
Sbjct: 705 ILGSGAAVQGKGVCEKLEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVT 756

BLAST of CSPI05G13450.1 vs. NCBI nr
Match: TYK06640.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK10078.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK24527.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 345.9 bits (886), Expect = 3.3e-91
Identity = 177/293 (60.41%), Postives = 224/293 (76.45%), Query Frame = 0

Query: 12  DRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVR-----AAKSGG---S 71
           +RVI +TFMNGLL W+++EV FCR   LA+MM++AQ VENREI R        SGG    
Sbjct: 237 ERVILDTFMNGLLPWVRSEVFFCRPKSLAEMMEVAQMVENREIARTEAKMCGYSGGKIAG 296

Query: 72  ANSI-----------DNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEKAL 131
            NS+           DNK+++  P+RTITLR     E ++EG  KRL D EF+ARKEK L
Sbjct: 297 QNSVVGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGL 356

Query: 132 YFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAII 191
            FRCNEKYS DHKC+M+EQRELRM+VVTEG+EE+EIVED E EEKEL  + I+E    ++
Sbjct: 357 CFRCNEKYSADHKCRMKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVV 416

Query: 192 ELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGV 251
           ELSIN VVGL++PGTMKVRG++ G+EVV+L+DCGATHNF+ EKLV+ L +P K+TSHYGV
Sbjct: 417 ELSINSVVGLNDPGTMKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGV 476

Query: 252 ILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           ILGS   ++GKG+CE +E+++ DWK+V +FLPLELGGVDV+L MQWLYSLG+T
Sbjct: 477 ILGSGAAVQGKGVCEKLEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVT 528

BLAST of CSPI05G13450.1 vs. NCBI nr
Match: KAA0039975.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 344.7 bits (883), Expect = 7.4e-91
Identity = 176/293 (60.07%), Postives = 224/293 (76.45%), Query Frame = 0

Query: 12  DRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVR-----AAKSGG---S 71
           +RVI +TFMNGLL W+++EV FCR   LA+MM++AQ VENREI R        SGG    
Sbjct: 237 ERVILDTFMNGLLPWVRSEVFFCRPKSLAEMMEVAQMVENREIARTEAKMCGYSGGKIAG 296

Query: 72  ANSI-----------DNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEKAL 131
            NS+           DNK+++  P+RTITLR     E ++EG  KRL D EF+ARKEK L
Sbjct: 297 QNSVVGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGL 356

Query: 132 YFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAII 191
            FRCNEKYS DH+C+M+EQRELRM+VVTEG+EE+EIVED E EEKEL  + I+E    ++
Sbjct: 357 CFRCNEKYSADHRCRMKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVV 416

Query: 192 ELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGV 251
           ELSIN VVGL++PGTMKVRG++ G+EVV+L+DCGATHNF+ EKLV+ L +P K+TSHYGV
Sbjct: 417 ELSINSVVGLNDPGTMKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGV 476

Query: 252 ILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           ILGS   ++GKG+CE +E+++ DWK+V +FLPLELGGVDV+L MQWLYSLG+T
Sbjct: 477 ILGSGAAVQGKGVCEKMEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVT 528

BLAST of CSPI05G13450.1 vs. NCBI nr
Match: KAA0039461.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK00651.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 342.0 bits (876), Expect = 4.8e-90
Identity = 175/295 (59.32%), Postives = 227/295 (76.95%), Query Frame = 0

Query: 12  DRVIEETFMNGLLSWIKAEVDFCRTTRLAQMMQLAQSVENREIVRA-------------- 71
           +RVIE+TFMNGLL W+++EV F R   LA+MM++AQ VENREIVR               
Sbjct: 208 ERVIEDTFMNGLLPWVRSEVVFYRPKGLAEMMEVAQIVENREIVRTEAKLNGYSGGRMTG 267

Query: 72  -------AKSGGSANSIDNKSDSTIPMRTITLRGVAGGEAKKEGPSKRLSDMEFRARKEK 131
                  A SGG A   ++KS+++ P+RTITLR  A  E ++EG  KRL D EF++RKEK
Sbjct: 268 QIGSNGKATSGGVAG--ESKSNTSFPIRTITLRSSAPTENRREGTYKRLPDAEFQSRKEK 327

Query: 132 ALYFRCNEKYSHDHKCKMREQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQA 191
            L FRCNEKYS DHKC+++EQRELRM+VVTEG+EE+EIVE+ E EEKEL  + ++E+   
Sbjct: 328 GLCFRCNEKYSADHKCRLKEQRELRMFVVTEGREEYEIVEE-EKEEKELGRIEVNEDITI 387

Query: 192 IIELSINFVVGLSNPGTMKVRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHY 251
           ++ELSIN VVGL++PGTMKVRG++ G+EV++L+DCGATHNF+ EKLVK L +P K+TSHY
Sbjct: 388 VVELSINSVVGLNDPGTMKVRGKLLGEEVIILIDCGATHNFVSEKLVKKLILPIKETSHY 447

Query: 252 GVILGSDTTIKGKGICEAVELKMNDWKVVANFLPLELGGVDVVLEMQWLYSLGIT 286
           GVILGS   ++GKGICE +E+++N WK+V +FLPLELGGVDV+L MQWLYSLG+T
Sbjct: 448 GVILGSGAAVQGKGICEKLEVQLNGWKIVEDFLPLELGGVDVILGMQWLYSLGVT 499

BLAST of CSPI05G13450.1 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-12
Identity = 46/158 (29.11%), Postives = 83/158 (52.53%), Query Frame = 0

Query: 130 EQRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAIIELSINFVVGLSNPGTMK 189
           + R+  +  +T  + + ++V+  +    EL+   ++++   + +     V+ L+    M+
Sbjct: 68  QSRQAELMSLTLVQAKLDVVKKKKGVINELE--ELEQDSYTLRQGMEQLVIDLTRNKGMR 127

Query: 190 VRGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGVILGSDTTIKGKGICEAV 249
             G I   +VV+ +D GAT NFI  +L  SL++PT  T+   V+LG    I+  G C  +
Sbjct: 128 FYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGI 187

Query: 250 ELKMNDWKVVANFLPLELG--GVDVVLEMQWLYSLGIT 286
            L + + ++  NFL L+L    VDV+L  +WL  LG T
Sbjct: 188 RLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGET 223

BLAST of CSPI05G13450.1 vs. TAIR 10
Match: AT3G30770.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.6e-09
Identity = 47/159 (29.56%), Postives = 76/159 (47.80%), Query Frame = 0

Query: 131 QRELRMYVVTEGKEEFEIVEDMESEEKELKMVRIDEEDQAIIELSINFVVGLSNPGTMKV 190
           Q EL  +++ EG   +    + E   ++ K +R     Q   + +  F  G      M+ 
Sbjct: 237 QVELMSFIMVEG-NTYGYGNEWEGLLEDFKTIR-----QVKRQSTTEFTKGKD----MRF 296

Query: 191 RGEIEGKEVVLLVDCGATHNFIFEKLVKSLQIPTKDTSHYGVILGSDTTIKGKGICEAVE 250
            G I   +VV+++D GAT+NFI ++L   L++PT  T+   V+LG    I+  G C  + 
Sbjct: 297 YGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCFGIN 356

Query: 251 LKMNDWKVVANFLPLELGGVDV----------VLEMQWL 280
           L + + ++  NFL L+L   DV           LE QWL
Sbjct: 357 LLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWL 385

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DLL91.6e-9160.41Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3D5P91.6e-9160.41Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TET83.6e-9160.07Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BLF52.3e-9059.32Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7U9J75.2e-9060.07Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
XP_031745972.11.6e-9362.59uncharacterized protein LOC116406393 [Cucumis sativus][more]
TYK18846.13.3e-9160.41Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK06640.13.3e-9160.41Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK10078.1 Ty3/gyp... [more]
KAA0039975.17.4e-9160.07Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0039461.14.8e-9059.32Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK00651.1 Ty3/gyp... [more]
Match NameE-valueIdentityDescription
AT3G29750.11.1e-1229.11Eukaryotic aspartyl protease family protein [more]
AT3G30770.17.6e-0929.56Eukaryotic aspartyl protease family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..169
NoneNo IPR availablePFAMPF08284RVP_2coord: 197..280
e-value: 4.8E-13
score: 49.1
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 18..283
NoneNo IPR availablePANTHERPTHR34482:SF20SUBFAMILY NOT NAMEDcoord: 18..283
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 190..279
e-value: 2.38504E-18
score: 76.2212
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 178..285
e-value: 1.8E-16
score: 62.1
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 185..284

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI05G13450CSPI05G13450gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI05G13450.1.cds3CSPI05G13450.1.cds3CDS
CSPI05G13450.1.cds2CSPI05G13450.1.cds2CDS
CSPI05G13450.1.cds1CSPI05G13450.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI05G13450.1CSPI05G13450.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0003824 catalytic activity