Homology
BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match:
Q680Z7 (Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E25 PE=2 SV=1)
HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38
Identity = 101/251 (40.24%), Postives = 140/251 (55.78%), Query Frame = 0
Query: 4 LWKRCKFLSAQSFSPFQHLQFYS-ISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQIR 63
L+ + S +S++ +H YS + S++H S + KY ++ K Q+
Sbjct: 3 LFSSRRITSLRSYTIIKHSSCYSTLVSDGNIFSIQH-----FQSLMQKYESNLKIIHQLH 62
Query: 64 SFIITSGLLL---NATANFILLCNTLLHCYP----------LYQPLRRI------PHTPP 123
S TSG LL + + L N LL CY LY L+R+ + P
Sbjct: 63 SHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLP 122
Query: 124 SYDTFAYSFLLHSCADLELTG--PGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDA 183
+D+F Y FLL + ++ G+ LH LTLK+GF SHVYVQTA+V MY G ++DA
Sbjct: 123 PFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDA 182
Query: 184 LKVFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHE 233
KVFDEMP+RN VTWNV+ITGL LG+ +A ++MP R VVSWT IIDGY R+++ +
Sbjct: 183 HKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPK 242
BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match:
Q38959 (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A6 PE=2 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 4.0e-24
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 0
Query: 43 LLISQLIKYATSHKATQQIRSFIITSGLLLNATANFILLCNTL-LHCYP----LYQPLRR 102
LL+ QLI ++S TQ + ++ + L +T + L+ +L ++ P L L
Sbjct: 53 LLVRQLISVSSSFGETQY--ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMM 112
Query: 103 IPHTPPSYDTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGF 162
I H +D F + F++ +C G Q+H L +K GF + V+ Q ++ +Y CG
Sbjct: 113 ISH-QSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGK 172
Query: 163 LVDALKVFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRL 222
KVFD+MP R+ V+W ++ GLV +L A VF+QMPMRNVVSWTA+I Y +
Sbjct: 173 PDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKN 232
Query: 223 NRHEEAADLFWKMVAD 234
R +EA LF +M D
Sbjct: 233 RRPDEAFQLFRRMQVD 245
BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 112.1 bits (279), Expect = 8.9e-24
Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 0
Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL--VDALK 165
D F Y FLL +C+ +H K+G S +YV A++ Y+ CG L DA+K
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175
Query: 166 VFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEA 225
+F++M +R++V+WN ++ GLVK GEL AR +FD+MP R+++SW ++DGY R +A
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKA 235
Query: 226 ADLFWKM 231
+LF KM
Sbjct: 236 FELFEKM 242
BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 2.2e-22
Identity = 46/122 (37.70%), Postives = 77/122 (63.11%), Query Frame = 0
Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVF 165
D + FL+ + +++E G Q H+ ++ GF + VYV+ ++V MYA CGF+ A ++F
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175
Query: 166 DEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAAD 225
+M R+ V+W ++ G K G + AR +FD+MP RN+ +W+ +I+GY + N E+A D
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235
Query: 226 LF 228
LF
Sbjct: 236 LF 237
BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match:
Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 2.2e-22
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0
Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVF 165
DTF + F+L + G Q+H + GF S V+V T +++MY +CG L DA K+F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174
Query: 166 DEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMP--MRNVVSWTAIIDGYTRLNRHEEA 225
DEM ++ WN L+ G K+GE+ AR++ + MP +RN VSWT +I GY + R EA
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEA 234
Query: 226 ADLFWKMVAD 234
++F +M+ +
Sbjct: 235 IEVFQRMLME 244
BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match:
XP_023544594.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 481 bits (1239), Expect = 1.16e-167
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
Query: 61 IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 61 IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI
Sbjct: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG
Sbjct: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match:
XP_022949710.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 471 bits (1212), Expect = 2.12e-163
Identity = 229/235 (97.45%), Postives = 234/235 (99.57%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
MQSLWKRCKFLSAQSFSPFQ+LQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12 MQSLWKRCKFLSAQSFSPFQNLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71
Query: 61 IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
IRSFIITSGLLLNATANFILLCNTLLHCYPLY+PLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72 IRSFIITSGLLLNATANFILLCNTLLHCYPLYEPLRRIPHTPPSYDTFAYSFLLHSCADL 131
Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMP+RNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPERNSVTWNVLI 191
Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLN+HEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNKHEEAADLFWKMVAHYG 246
BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match:
KAG7033680.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 471 bits (1212), Expect = 2.35e-163
Identity = 229/235 (97.45%), Postives = 234/235 (99.57%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
MQSLWKRCKFLSAQSFSPFQ+LQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 15 MQSLWKRCKFLSAQSFSPFQNLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 74
Query: 61 IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
IRSFIITSGLLLNATANFILLCNTLLHCYPLY+PLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 75 IRSFIITSGLLLNATANFILLCNTLLHCYPLYEPLRRIPHTPPSYDTFAYSFLLHSCADL 134
Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMP+RNSVTWNVLI
Sbjct: 135 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPERNSVTWNVLI 194
Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLN+HEEAADLFWKMVA YG
Sbjct: 195 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNKHEEAADLFWKMVAHYG 249
BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match:
KAG6603500.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 469 bits (1207), Expect = 1.22e-162
Identity = 229/235 (97.45%), Postives = 233/235 (99.15%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
MQSLWKRCKFLSAQSFSPFQ+LQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12 MQSLWKRCKFLSAQSFSPFQNLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71
Query: 61 IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
IRSFIITSGLLLNATANFILLCNTLL CYPLY+PLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72 IRSFIITSGLLLNATANFILLCNTLLRCYPLYEPLRRIPHTPPSYDTFAYSFLLHSCADL 131
Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMP+RNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPERNSVTWNVLI 191
Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVAHYG 246
BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match:
XP_022978153.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 465 bits (1196), Expect = 5.71e-161
Identity = 227/235 (96.60%), Postives = 232/235 (98.72%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
MQSLWKR KFLS+Q+FSPFQ+LQF+SISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12 MQSLWKRGKFLSSQTFSPFQNLQFFSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71
Query: 61 IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
IRSFIITSGLL NATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72 IRSFIITSGLLFNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 131
Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMPDRNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPDRNSVTWNVLI 191
Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVAHYG 246
BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match:
A0A6J1GDJ6 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111453023 PE=4 SV=1)
HSP 1 Score: 471 bits (1212), Expect = 1.03e-163
Identity = 229/235 (97.45%), Postives = 234/235 (99.57%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
MQSLWKRCKFLSAQSFSPFQ+LQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12 MQSLWKRCKFLSAQSFSPFQNLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71
Query: 61 IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
IRSFIITSGLLLNATANFILLCNTLLHCYPLY+PLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72 IRSFIITSGLLLNATANFILLCNTLLHCYPLYEPLRRIPHTPPSYDTFAYSFLLHSCADL 131
Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMP+RNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPERNSVTWNVLI 191
Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLN+HEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNKHEEAADLFWKMVAHYG 246
BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match:
A0A6J1IS71 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111478217 PE=4 SV=1)
HSP 1 Score: 465 bits (1196), Expect = 2.76e-161
Identity = 227/235 (96.60%), Postives = 232/235 (98.72%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
MQSLWKR KFLS+Q+FSPFQ+LQF+SISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12 MQSLWKRGKFLSSQTFSPFQNLQFFSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71
Query: 61 IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
IRSFIITSGLL NATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72 IRSFIITSGLLFNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 131
Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMPDRNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPDRNSVTWNVLI 191
Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVAHYG 246
BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match:
A0A5D3CDM6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00650 PE=4 SV=1)
HSP 1 Score: 379 bits (974), Expect = 1.15e-127
Identity = 192/244 (78.69%), Postives = 205/244 (84.02%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSIS---------PSAAYKSLRHSPPPLLISQLIKY 60
M LWK CKF+S+QS S FQ+LQF S S PSAA SL SP LISQ+ KY
Sbjct: 1 MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS-FLISQVFKY 60
Query: 61 ATSHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYS 120
AT+HKA QQIRSFII SGLLLNAT NFILLCNTLLHCYPLYQPLR+ P PPSYDTFAYS
Sbjct: 61 ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120
Query: 121 FLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDR 180
FL HSCADLEL GPG QLHALT K+GFPSHVYVQTAI+RMYA+ GFL+DALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180
Query: 181 NSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMV 235
+SVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFW+MV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240
BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match:
A0A5A7UYK1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00550 PE=4 SV=1)
HSP 1 Score: 379 bits (974), Expect = 1.15e-127
Identity = 192/244 (78.69%), Postives = 205/244 (84.02%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSIS---------PSAAYKSLRHSPPPLLISQLIKY 60
M LWK CKF+S+QS S FQ+LQF S S PSAA SL SP LISQ+ KY
Sbjct: 1 MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS-FLISQVFKY 60
Query: 61 ATSHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYS 120
AT+HKA QQIRSFII SGLLLNAT NFILLCNTLLHCYPLYQPLR+ P PPSYDTFAYS
Sbjct: 61 ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120
Query: 121 FLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDR 180
FL HSCADLEL GPG QLHALT K+GFPSHVYVQTAI+RMYA+ GFL+DALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180
Query: 181 NSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMV 235
+SVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFW+MV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240
BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match:
A0A1S4DUC6 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103485965 PE=4 SV=1)
HSP 1 Score: 379 bits (974), Expect = 1.15e-127
Identity = 192/244 (78.69%), Postives = 205/244 (84.02%), Query Frame = 0
Query: 1 MQSLWKRCKFLSAQSFSPFQHLQFYSIS---------PSAAYKSLRHSPPPLLISQLIKY 60
M LWK CKF+S+QS S FQ+LQF S S PSAA SL SP LISQ+ KY
Sbjct: 1 MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS-FLISQVFKY 60
Query: 61 ATSHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYS 120
AT+HKA QQIRSFII SGLLLNAT NFILLCNTLLHCYPLYQPLR+ P PPSYDTFAYS
Sbjct: 61 ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120
Query: 121 FLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDR 180
FL HSCADLEL GPG QLHALT K+GFPSHVYVQTAI+RMYA+ GFL+DALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180
Query: 181 NSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMV 235
+SVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFW+MV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240
BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match:
AT1G09220.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39
Identity = 101/251 (40.24%), Postives = 140/251 (55.78%), Query Frame = 0
Query: 4 LWKRCKFLSAQSFSPFQHLQFYS-ISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQIR 63
L+ + S +S++ +H YS + S++H S + KY ++ K Q+
Sbjct: 3 LFSSRRITSLRSYTIIKHSSCYSTLVSDGNIFSIQH-----FQSLMQKYESNLKIIHQLH 62
Query: 64 SFIITSGLLL---NATANFILLCNTLLHCYP----------LYQPLRRI------PHTPP 123
S TSG LL + + L N LL CY LY L+R+ + P
Sbjct: 63 SHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLP 122
Query: 124 SYDTFAYSFLLHSCADLELTG--PGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDA 183
+D+F Y FLL + ++ G+ LH LTLK+GF SHVYVQTA+V MY G ++DA
Sbjct: 123 PFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDA 182
Query: 184 LKVFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHE 233
KVFDEMP+RN VTWNV+ITGL LG+ +A ++MP R VVSWT IIDGY R+++ +
Sbjct: 183 HKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPK 242
BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match:
AT3G26630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 113.2 bits (282), Expect = 2.8e-25
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 0
Query: 43 LLISQLIKYATSHKATQQIRSFIITSGLLLNATANFILLCNTL-LHCYP----LYQPLRR 102
LL+ QLI ++S TQ + ++ + L +T + L+ +L ++ P L L
Sbjct: 53 LLVRQLISVSSSFGETQY--ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMM 112
Query: 103 IPHTPPSYDTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGF 162
I H +D F + F++ +C G Q+H L +K GF + V+ Q ++ +Y CG
Sbjct: 113 ISH-QSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGK 172
Query: 163 LVDALKVFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRL 222
KVFD+MP R+ V+W ++ GLV +L A VF+QMPMRNVVSWTA+I Y +
Sbjct: 173 PDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKN 232
Query: 223 NRHEEAADLFWKMVAD 234
R +EA LF +M D
Sbjct: 233 RRPDEAFQLFRRMQVD 245
BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 112.1 bits (279), Expect = 6.3e-25
Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 0
Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL--VDALK 165
D F Y FLL +C+ +H K+G S +YV A++ Y+ CG L DA+K
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175
Query: 166 VFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEA 225
+F++M +R++V+WN ++ GLVK GEL AR +FD+MP R+++SW ++DGY R +A
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKA 235
Query: 226 ADLFWKM 231
+LF KM
Sbjct: 236 FELFEKM 242
BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 107.5 bits (267), Expect = 1.6e-23
Identity = 46/122 (37.70%), Postives = 77/122 (63.11%), Query Frame = 0
Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVF 165
D + FL+ + +++E G Q H+ ++ GF + VYV+ ++V MYA CGF+ A ++F
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175
Query: 166 DEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAAD 225
+M R+ V+W ++ G K G + AR +FD+MP RN+ +W+ +I+GY + N E+A D
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235
Query: 226 LF 228
LF
Sbjct: 236 LF 237
BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match:
AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 107.5 bits (267), Expect = 1.6e-23
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0
Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVF 165
DTF + F+L + G Q+H + GF S V+V T +++MY +CG L DA K+F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174
Query: 166 DEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMP--MRNVVSWTAIIDGYTRLNRHEEA 225
DEM ++ WN L+ G K+GE+ AR++ + MP +RN VSWT +I GY + R EA
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEA 234
Query: 226 ADLFWKMVAD 234
++F +M+ +
Sbjct: 235 IEVFQRMLME 244
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q680Z7 | 2.2e-38 | 40.24 | Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidop... | [more] |
Q38959 | 4.0e-24 | 35.71 | Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... | [more] |
Q9LS72 | 8.9e-24 | 40.94 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9FG16 | 2.2e-22 | 37.70 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
Q9FMA1 | 2.2e-22 | 39.23 | Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
XP_023544594.1 | 1.16e-167 | 100.00 | pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucurbita ... | [more] |
XP_022949710.1 | 2.12e-163 | 97.45 | pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like [Cucur... | [more] |
KAG7033680.1 | 2.35e-163 | 97.45 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG6603500.1 | 1.22e-162 | 97.45 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022978153.1 | 5.71e-161 | 96.60 | pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GDJ6 | 1.03e-163 | 97.45 | pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cuc... | [more] |
A0A6J1IS71 | 2.76e-161 | 96.60 | pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cuc... | [more] |
A0A5D3CDM6 | 1.15e-127 | 78.69 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5A7UYK1 | 1.15e-127 | 78.69 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4DUC6 | 1.15e-127 | 78.69 | pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09220.1 | 1.5e-39 | 40.24 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G26630.1 | 2.8e-25 | 35.71 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G29230.1 | 6.3e-25 | 40.94 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G06540.1 | 1.6e-23 | 37.70 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G56310.1 | 1.6e-23 | 39.23 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |