Cp4.1LG10g07210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g07210
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG10: 6015123 .. 6016586 (-)
RNA-Seq ExpressionCp4.1LG10g07210
SyntenyCp4.1LG10g07210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAGCTTATGGAAGCGATGTAAGTTCCTCTCCGCTCAATCTTTCTCTCCCTTTCAACATCTTCAATTCTATTCAATCTCTCCCTCCGCCGCATACAAATCTCTCCGCCACTCTCCGCCGCCGCTCTTAATCTCTCAGCTCATCAAATACGCCACTTCCCACAAAGCAACCCAACAAATTCGCTCTTTCATCATCACCTCCGGCTTACTTCTCAACGCCACCGCCAATTTCATCCTTCTCTGCAACACATTGCTCCATTGCTACCCTCTCTACCAGCCCCTTCGCCGCATTCCTCATACTCCCCCCTCCTACGATACTTTTGCCTATTCCTTCCTCCTCCATTCTTGCGCCGATTTGGAGCTCACCGGACCTGGTCTTCAACTCCACGCTCTCACTCTCAAGGTAGGCTTTCCTTCCCATGTTTATGTTCAGACTGCAATTGTACGTATGTATGCTGCTTGTGGGTTTTTGGTTGATGCTCTCAAAGTGTTCGATGAAATGCCTGACCGAAACTCTGTCACCTGGAATGTCTTGATTACTGGTTTGGTTAAGTTGGGTGAGCTTGGACGGGCTCGTGCGGTGTTTGATCAAATGCCTATGCGTAATGTTGTGTCTTGGACTGCCATAATCGATGGCTATACTCGTCTAAACAGGCATGAGGAAGCTGCGGATTTGTTTTGGAAAATGGTGGCTGATTATGGTATGGAGCCTACTGAAATAACACTTCTAACGATTTTCCCTTCCATTTCGAATCTTGGGGCTCTTAAGATTTGTCATTCAGTCCATGCTTATGCAGAGAAGAAAGGGTTTAAGGTGTCTGATGTACGCATTGCTAATTCATTGATCGATTGTTATTCAAAATGTGGTTGTATTAATAGTGCATCAATGGTGTTTGAAGAAATGTCAGCTGAAAGGAAGAATCTGGTGACTTGGACGTCGATAATCACCGGATTCACAATGCATGGAATGGGAAAAGAAGCTGTGGAGAGCTTCGAAAGGATGAAGAACGAAGGCCACGAGCCGAACCGGGTCACGTTCTTGAGCATTCTAAGTGCTTGCAGCCATGGAGGACTGGTTGAGGAAGGTCTAGAGTTTTTCAAGAAGATGGTTGAGGAGTATCAGATAGAGCCGGATATAATGCACTATGGGAGTTTAATAGACATGTTGGGAAGGGCTGGGAGGGTAGAAGAAGCTGAAAGAATAGCTTTGGAGATACCTATGGAGATAGCCAATGTTGTTATATGGAGGACACTTTTGGGTGCCTGTAGTTTTCATGGTAACGTGTCGATTGCGGAGCGGGTAACACGGAGGATATTAGACATGGAGGGCGCGTATGGAGGTGATTATGTGCTCATGTCTAACATTTTTGCTGCAGCTGGGAAATATGGTGATGCTGAGAAATGGAGAAGATTGATGGATTCTAGCAAATCCTCTAAAATTCCAGGACAGAGCCTTCTCTAA

mRNA sequence

ATGCAGAGCTTATGGAAGCGATGTAAGTTCCTCTCCGCTCAATCTTTCTCTCCCTTTCAACATCTTCAATTCTATTCAATCTCTCCCTCCGCCGCATACAAATCTCTCCGCCACTCTCCGCCGCCGCTCTTAATCTCTCAGCTCATCAAATACGCCACTTCCCACAAAGCAACCCAACAAATTCGCTCTTTCATCATCACCTCCGGCTTACTTCTCAACGCCACCGCCAATTTCATCCTTCTCTGCAACACATTGCTCCATTGCTACCCTCTCTACCAGCCCCTTCGCCGCATTCCTCATACTCCCCCCTCCTACGATACTTTTGCCTATTCCTTCCTCCTCCATTCTTGCGCCGATTTGGAGCTCACCGGACCTGGTCTTCAACTCCACGCTCTCACTCTCAAGGTAGGCTTTCCTTCCCATGTTTATGTTCAGACTGCAATTGTACGTATGTATGCTGCTTGTGGGTTTTTGGTTGATGCTCTCAAAGTGTTCGATGAAATGCCTGACCGAAACTCTGTCACCTGGAATGTCTTGATTACTGGTTTGGTTAAGTTGGGTGAGCTTGGACGGGCTCGTGCGGTGTTTGATCAAATGCCTATGCGTAATGTTGTGTCTTGGACTGCCATAATCGATGGCTATACTCGTCTAAACAGGCATGAGGAAGCTGCGGATTTGTTTTGGAAAATGGTGGCTGATTATGGACAGAGCCTTCTCTAA

Coding sequence (CDS)

ATGCAGAGCTTATGGAAGCGATGTAAGTTCCTCTCCGCTCAATCTTTCTCTCCCTTTCAACATCTTCAATTCTATTCAATCTCTCCCTCCGCCGCATACAAATCTCTCCGCCACTCTCCGCCGCCGCTCTTAATCTCTCAGCTCATCAAATACGCCACTTCCCACAAAGCAACCCAACAAATTCGCTCTTTCATCATCACCTCCGGCTTACTTCTCAACGCCACCGCCAATTTCATCCTTCTCTGCAACACATTGCTCCATTGCTACCCTCTCTACCAGCCCCTTCGCCGCATTCCTCATACTCCCCCCTCCTACGATACTTTTGCCTATTCCTTCCTCCTCCATTCTTGCGCCGATTTGGAGCTCACCGGACCTGGTCTTCAACTCCACGCTCTCACTCTCAAGGTAGGCTTTCCTTCCCATGTTTATGTTCAGACTGCAATTGTACGTATGTATGCTGCTTGTGGGTTTTTGGTTGATGCTCTCAAAGTGTTCGATGAAATGCCTGACCGAAACTCTGTCACCTGGAATGTCTTGATTACTGGTTTGGTTAAGTTGGGTGAGCTTGGACGGGCTCGTGCGGTGTTTGATCAAATGCCTATGCGTAATGTTGTGTCTTGGACTGCCATAATCGATGGCTATACTCGTCTAAACAGGCATGAGGAAGCTGCGGATTTGTTTTGGAAAATGGTGGCTGATTATGGACAGAGCCTTCTCTAA

Protein sequence

MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYGQSLL
Homology
BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match: Q680Z7 (Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E25 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38
Identity = 101/251 (40.24%), Postives = 140/251 (55.78%), Query Frame = 0

Query: 4   LWKRCKFLSAQSFSPFQHLQFYS-ISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQIR 63
           L+   +  S +S++  +H   YS +       S++H       S + KY ++ K   Q+ 
Sbjct: 3   LFSSRRITSLRSYTIIKHSSCYSTLVSDGNIFSIQH-----FQSLMQKYESNLKIIHQLH 62

Query: 64  SFIITSGLLL---NATANFILLCNTLLHCYP----------LYQPLRRI------PHTPP 123
           S   TSG LL      +  + L N LL CY           LY  L+R+        + P
Sbjct: 63  SHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLP 122

Query: 124 SYDTFAYSFLLHSCADLELTG--PGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDA 183
            +D+F Y FLL + ++        G+ LH LTLK+GF SHVYVQTA+V MY   G ++DA
Sbjct: 123 PFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDA 182

Query: 184 LKVFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHE 233
            KVFDEMP+RN VTWNV+ITGL  LG+  +A    ++MP R VVSWT IIDGY R+++ +
Sbjct: 183 HKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPK 242

BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match: Q38959 (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A6 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.0e-24
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 0

Query: 43  LLISQLIKYATSHKATQQIRSFIITSGLLLNATANFILLCNTL-LHCYP----LYQPLRR 102
           LL+ QLI  ++S   TQ   + ++ + L   +T  + L+  +L ++  P    L   L  
Sbjct: 53  LLVRQLISVSSSFGETQY--ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMM 112

Query: 103 IPHTPPSYDTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGF 162
           I H    +D F + F++ +C        G Q+H L +K GF + V+ Q  ++ +Y  CG 
Sbjct: 113 ISH-QSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGK 172

Query: 163 LVDALKVFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRL 222
                KVFD+MP R+ V+W  ++ GLV   +L  A  VF+QMPMRNVVSWTA+I  Y + 
Sbjct: 173 PDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKN 232

Query: 223 NRHEEAADLFWKMVAD 234
            R +EA  LF +M  D
Sbjct: 233 RRPDEAFQLFRRMQVD 245

BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.9e-24
Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 0

Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL--VDALK 165
           D F Y FLL +C+          +H    K+G  S +YV  A++  Y+ CG L   DA+K
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175

Query: 166 VFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEA 225
           +F++M +R++V+WN ++ GLVK GEL  AR +FD+MP R+++SW  ++DGY R     +A
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKA 235

Query: 226 ADLFWKM 231
            +LF KM
Sbjct: 236 FELFEKM 242

BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-22
Identity = 46/122 (37.70%), Postives = 77/122 (63.11%), Query Frame = 0

Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVF 165
           D   + FL+ + +++E    G Q H+  ++ GF + VYV+ ++V MYA CGF+  A ++F
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175

Query: 166 DEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAAD 225
            +M  R+ V+W  ++ G  K G +  AR +FD+MP RN+ +W+ +I+GY + N  E+A D
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235

Query: 226 LF 228
           LF
Sbjct: 236 LF 237

BLAST of Cp4.1LG10g07210 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-22
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0

Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVF 165
           DTF + F+L     +     G Q+H   +  GF S V+V T +++MY +CG L DA K+F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174

Query: 166 DEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMP--MRNVVSWTAIIDGYTRLNRHEEA 225
           DEM  ++   WN L+ G  K+GE+  AR++ + MP  +RN VSWT +I GY +  R  EA
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEA 234

Query: 226 ADLFWKMVAD 234
            ++F +M+ +
Sbjct: 235 IEVFQRMLME 244

BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match: XP_023544594.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481 bits (1239), Expect = 1.16e-167
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
           MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60

Query: 61  IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
           IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 61  IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120

Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
           ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI
Sbjct: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180

Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
           TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG
Sbjct: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235

BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match: XP_022949710.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 471 bits (1212), Expect = 2.12e-163
Identity = 229/235 (97.45%), Postives = 234/235 (99.57%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
           MQSLWKRCKFLSAQSFSPFQ+LQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12  MQSLWKRCKFLSAQSFSPFQNLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71

Query: 61  IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
           IRSFIITSGLLLNATANFILLCNTLLHCYPLY+PLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72  IRSFIITSGLLLNATANFILLCNTLLHCYPLYEPLRRIPHTPPSYDTFAYSFLLHSCADL 131

Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
           ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMP+RNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPERNSVTWNVLI 191

Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
           TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLN+HEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNKHEEAADLFWKMVAHYG 246

BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match: KAG7033680.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 471 bits (1212), Expect = 2.35e-163
Identity = 229/235 (97.45%), Postives = 234/235 (99.57%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
           MQSLWKRCKFLSAQSFSPFQ+LQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 15  MQSLWKRCKFLSAQSFSPFQNLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 74

Query: 61  IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
           IRSFIITSGLLLNATANFILLCNTLLHCYPLY+PLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 75  IRSFIITSGLLLNATANFILLCNTLLHCYPLYEPLRRIPHTPPSYDTFAYSFLLHSCADL 134

Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
           ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMP+RNSVTWNVLI
Sbjct: 135 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPERNSVTWNVLI 194

Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
           TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLN+HEEAADLFWKMVA YG
Sbjct: 195 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNKHEEAADLFWKMVAHYG 249

BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match: KAG6603500.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469 bits (1207), Expect = 1.22e-162
Identity = 229/235 (97.45%), Postives = 233/235 (99.15%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
           MQSLWKRCKFLSAQSFSPFQ+LQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12  MQSLWKRCKFLSAQSFSPFQNLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71

Query: 61  IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
           IRSFIITSGLLLNATANFILLCNTLL CYPLY+PLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72  IRSFIITSGLLLNATANFILLCNTLLRCYPLYEPLRRIPHTPPSYDTFAYSFLLHSCADL 131

Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
           ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMP+RNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPERNSVTWNVLI 191

Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
           TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVAHYG 246

BLAST of Cp4.1LG10g07210 vs. NCBI nr
Match: XP_022978153.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 465 bits (1196), Expect = 5.71e-161
Identity = 227/235 (96.60%), Postives = 232/235 (98.72%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
           MQSLWKR KFLS+Q+FSPFQ+LQF+SISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12  MQSLWKRGKFLSSQTFSPFQNLQFFSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71

Query: 61  IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
           IRSFIITSGLL NATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72  IRSFIITSGLLFNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 131

Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
           ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMPDRNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPDRNSVTWNVLI 191

Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
           TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVAHYG 246

BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match: A0A6J1GDJ6 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111453023 PE=4 SV=1)

HSP 1 Score: 471 bits (1212), Expect = 1.03e-163
Identity = 229/235 (97.45%), Postives = 234/235 (99.57%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
           MQSLWKRCKFLSAQSFSPFQ+LQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12  MQSLWKRCKFLSAQSFSPFQNLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71

Query: 61  IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
           IRSFIITSGLLLNATANFILLCNTLLHCYPLY+PLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72  IRSFIITSGLLLNATANFILLCNTLLHCYPLYEPLRRIPHTPPSYDTFAYSFLLHSCADL 131

Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
           ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMP+RNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPERNSVTWNVLI 191

Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
           TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLN+HEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNKHEEAADLFWKMVAHYG 246

BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match: A0A6J1IS71 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111478217 PE=4 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 2.76e-161
Identity = 227/235 (96.60%), Postives = 232/235 (98.72%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 60
           MQSLWKR KFLS+Q+FSPFQ+LQF+SISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ
Sbjct: 12  MQSLWKRGKFLSSQTFSPFQNLQFFSISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQ 71

Query: 61  IRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 120
           IRSFIITSGLL NATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL
Sbjct: 72  IRSFIITSGLLFNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYSFLLHSCADL 131

Query: 121 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDRNSVTWNVLI 180
           ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL+DALKVFDEMPDRNSVTWNVLI
Sbjct: 132 ELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPDRNSVTWNVLI 191

Query: 181 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVADYG 235
           TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVA YG
Sbjct: 192 TGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMVAHYG 246

BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match: A0A5D3CDM6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00650 PE=4 SV=1)

HSP 1 Score: 379 bits (974), Expect = 1.15e-127
Identity = 192/244 (78.69%), Postives = 205/244 (84.02%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSIS---------PSAAYKSLRHSPPPLLISQLIKY 60
           M  LWK CKF+S+QS S FQ+LQF S S         PSAA  SL  SP   LISQ+ KY
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS-FLISQVFKY 60

Query: 61  ATSHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYS 120
           AT+HKA QQIRSFII SGLLLNAT NFILLCNTLLHCYPLYQPLR+ P  PPSYDTFAYS
Sbjct: 61  ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDR 180
           FL HSCADLEL GPG QLHALT K+GFPSHVYVQTAI+RMYA+ GFL+DALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180

Query: 181 NSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMV 235
           +SVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFW+MV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match: A0A5A7UYK1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00550 PE=4 SV=1)

HSP 1 Score: 379 bits (974), Expect = 1.15e-127
Identity = 192/244 (78.69%), Postives = 205/244 (84.02%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSIS---------PSAAYKSLRHSPPPLLISQLIKY 60
           M  LWK CKF+S+QS S FQ+LQF S S         PSAA  SL  SP   LISQ+ KY
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS-FLISQVFKY 60

Query: 61  ATSHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYS 120
           AT+HKA QQIRSFII SGLLLNAT NFILLCNTLLHCYPLYQPLR+ P  PPSYDTFAYS
Sbjct: 61  ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDR 180
           FL HSCADLEL GPG QLHALT K+GFPSHVYVQTAI+RMYA+ GFL+DALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180

Query: 181 NSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMV 235
           +SVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFW+MV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

BLAST of Cp4.1LG10g07210 vs. ExPASy TrEMBL
Match: A0A1S4DUC6 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103485965 PE=4 SV=1)

HSP 1 Score: 379 bits (974), Expect = 1.15e-127
Identity = 192/244 (78.69%), Postives = 205/244 (84.02%), Query Frame = 0

Query: 1   MQSLWKRCKFLSAQSFSPFQHLQFYSIS---------PSAAYKSLRHSPPPLLISQLIKY 60
           M  LWK CKF+S+QS S FQ+LQF S S         PSAA  SL  SP   LISQ+ KY
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAASHSLCFSPS-FLISQVFKY 60

Query: 61  ATSHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYS 120
           AT+HKA QQIRSFII SGLLLNAT NFILLCNTLLHCYPLYQPLR+ P  PPSYDTFAYS
Sbjct: 61  ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDR 180
           FL HSCADLEL GPG QLHALT K+GFPSHVYVQTAI+RMYA+ GFL+DALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180

Query: 181 NSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMV 235
           +SVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFW+MV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match: AT1G09220.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39
Identity = 101/251 (40.24%), Postives = 140/251 (55.78%), Query Frame = 0

Query: 4   LWKRCKFLSAQSFSPFQHLQFYS-ISPSAAYKSLRHSPPPLLISQLIKYATSHKATQQIR 63
           L+   +  S +S++  +H   YS +       S++H       S + KY ++ K   Q+ 
Sbjct: 3   LFSSRRITSLRSYTIIKHSSCYSTLVSDGNIFSIQH-----FQSLMQKYESNLKIIHQLH 62

Query: 64  SFIITSGLLL---NATANFILLCNTLLHCYP----------LYQPLRRI------PHTPP 123
           S   TSG LL      +  + L N LL CY           LY  L+R+        + P
Sbjct: 63  SHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLP 122

Query: 124 SYDTFAYSFLLHSCADLELTG--PGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDA 183
            +D+F Y FLL + ++        G+ LH LTLK+GF SHVYVQTA+V MY   G ++DA
Sbjct: 123 PFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDA 182

Query: 184 LKVFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHE 233
            KVFDEMP+RN VTWNV+ITGL  LG+  +A    ++MP R VVSWT IIDGY R+++ +
Sbjct: 183 HKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPK 242

BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match: AT3G26630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-25
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 0

Query: 43  LLISQLIKYATSHKATQQIRSFIITSGLLLNATANFILLCNTL-LHCYP----LYQPLRR 102
           LL+ QLI  ++S   TQ   + ++ + L   +T  + L+  +L ++  P    L   L  
Sbjct: 53  LLVRQLISVSSSFGETQY--ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMM 112

Query: 103 IPHTPPSYDTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGF 162
           I H    +D F + F++ +C        G Q+H L +K GF + V+ Q  ++ +Y  CG 
Sbjct: 113 ISH-QSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGK 172

Query: 163 LVDALKVFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRL 222
                KVFD+MP R+ V+W  ++ GLV   +L  A  VF+QMPMRNVVSWTA+I  Y + 
Sbjct: 173 PDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKN 232

Query: 223 NRHEEAADLFWKMVAD 234
            R +EA  LF +M  D
Sbjct: 233 RRPDEAFQLFRRMQVD 245

BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 6.3e-25
Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 0

Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFL--VDALK 165
           D F Y FLL +C+          +H    K+G  S +YV  A++  Y+ CG L   DA+K
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175

Query: 166 VFDEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEA 225
           +F++M +R++V+WN ++ GLVK GEL  AR +FD+MP R+++SW  ++DGY R     +A
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKA 235

Query: 226 ADLFWKM 231
            +LF KM
Sbjct: 236 FELFEKM 242

BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-23
Identity = 46/122 (37.70%), Postives = 77/122 (63.11%), Query Frame = 0

Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVF 165
           D   + FL+ + +++E    G Q H+  ++ GF + VYV+ ++V MYA CGF+  A ++F
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175

Query: 166 DEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAAD 225
            +M  R+ V+W  ++ G  K G +  AR +FD+MP RN+ +W+ +I+GY + N  E+A D
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235

Query: 226 LF 228
           LF
Sbjct: 236 LF 237

BLAST of Cp4.1LG10g07210 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-23
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0

Query: 106 DTFAYSFLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVF 165
           DTF + F+L     +     G Q+H   +  GF S V+V T +++MY +CG L DA K+F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174

Query: 166 DEMPDRNSVTWNVLITGLVKLGELGRARAVFDQMP--MRNVVSWTAIIDGYTRLNRHEEA 225
           DEM  ++   WN L+ G  K+GE+  AR++ + MP  +RN VSWT +I GY +  R  EA
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEA 234

Query: 226 ADLFWKMVAD 234
            ++F +M+ +
Sbjct: 235 IEVFQRMLME 244

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q680Z72.2e-3840.24Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidop... [more]
Q389594.0e-2435.71Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... [more]
Q9LS728.9e-2440.94Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... [more]
Q9FG162.2e-2237.70Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
Q9FMA12.2e-2239.23Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_023544594.11.16e-167100.00pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucurbita ... [more]
XP_022949710.12.12e-16397.45pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like [Cucur... [more]
KAG7033680.12.35e-16397.45Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6603500.11.22e-16297.45Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022978153.15.71e-16196.60pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like [Cucur... [more]
Match NameE-valueIdentityDescription
A0A6J1GDJ61.03e-16397.45pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cuc... [more]
A0A6J1IS712.76e-16196.60pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cuc... [more]
A0A5D3CDM61.15e-12778.69Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7UYK11.15e-12778.69Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4DUC61.15e-12778.69pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Cucumis ... [more]
Match NameE-valueIdentityDescription
AT1G09220.11.5e-3940.24Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G26630.12.8e-2535.71Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G29230.16.3e-2540.94Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G06540.11.6e-2337.70Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G56310.11.6e-2339.23Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 174..204
e-value: 1.3E-6
score: 26.2
coord: 205..231
e-value: 3.8E-4
score: 18.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 174..203
e-value: 3.9E-6
score: 26.7
coord: 146..172
e-value: 0.0039
score: 17.3
coord: 205..231
e-value: 5.6E-6
score: 26.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..206
score: 10.928473
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 91..237
e-value: 2.1E-26
score: 95.1
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 147..231
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 90..201
NoneNo IPR availablePANTHERPTHR47925:SF92PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 147..231
NoneNo IPR availablePANTHERPTHR47925:SF92PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 90..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g07210.1Cp4.1LG10g07210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding