Cucsat.G13116 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCTTAAATTAATTTACACTCTCTGCCACCCATTTCCTCAAAATTCAATTCTCTCTCTCTAAATTAATGATAATAAAAATTAAATAAATAAAAAAAAATCCTTTTTCTTTTGCTTCCCACTTTCCCACCTTCTTTTCCTTATATAAACCATTCCCCGGAGTCCTATGTTTCCCACAAACTCACTTAACATTTTCTCAACTTCCTCCGCCTTCCTCCGCCGCCAATCGCCGCCGTCTGATTTTTTTCAATACTTCAAGGTATATATCCAAATGCATATTGCTAAAGTTTTTTTCAACTTCTGTTTTTTTCTTTCTCCATTGCTCTTTTAAGGAAAATCTATGAATTGGGTTTTCTTTTTTCTTTCCGAAGTTTATAAATTTATATGGTTTTAAAATTTTAAAATTTCCCATAAGTAGATCATTATATGAAAATGGAGAAAACGACATTACAAGATTCAAGTTCTAACTCAACCTCTGTGTTTTTTTCTTTCTAATATTATTATTTAACCTTCTAAAACAGGGGAGGAAATCCCATTTGCTTTTTCCTTCCATTATTCTCATAGAATTTAGCTCAATTTGAGTGTGTTTAATTCTAATTAATTAATCTTTTTTTCTAACTTAGCAGAGGAGGAAAAAAAAAGTAGGAGACAATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGTTGAACCTGTCTCCGCCACGACCACATCCATTGGTGTCATCGCCAAGCCGATCAGCGACGGTTTCGCCAACATCGCCGCCGAGTTCTTGCGTGTCGTCGGAGCTAAATCAGGACGACGGTGGGGCGGGTTTACGATATTCAAGTAGCCCGGAAGCAACATCAATGGTGCTGGTGGGGTGCCCTCGTTGCCTAATGTACGTGATGCTGTCGGAGAATGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTTCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACAGCCGCCAGGAAGATCTAAGGACAGAGAAAAATTGAAATTACCAAATCTAAACTATCTTAAAATTTCATTAGCCTGTTAAATGTTTTTTTTTTTCTTTTTCTTTTTCTTTTTAGATGTGAAATTGAAAAGAAAAATGTCTAGGTTTTGTTGGGAGAAAGTGGAAGCCTATCTTCTTATATAGCATGGAAGTGGCCATTTTTCTTTTTCTGAAAATAGAGTTGAGAAGATGAATTTATATTAATTTATTTAGATATTGAGCTCATCAATTTAACCTTTCTTTTTTCTTCCTTCCATATGATATTTGATTTACCAAATGCTTTCTTTTCCTTTTCCTTCTCT ATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGTTGAACCTGTCTCCGCCACGACCACATCCATTGGTGTCATCGCCAAGCCGATCAGCGACGGTTTCGCCAACATCGCCGCCGAGTTCTTGCGTGTCGTCGGAGCTAAATCAGGACGACGGTGGGGCGGGTTTACGATATTCAAGTAGCCCGGAAGCAACATCAATGGTGCTGGTGGGGTGCCCTCGTTGCCTAATGTACGTGATGCTGTCGGAGAATGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTTCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACAGCCGCCAGGAAGATCTAA MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI Homology
BLAST of Cucsat.G13116 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.7e-36 Identity = 85/119 (71.43%), Postives = 96/119 (80.67%), Query Frame = 0
BLAST of Cucsat.G13116 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 5.8e-24 Identity = 66/116 (56.90%), Postives = 79/116 (68.10%), Query Frame = 0
BLAST of Cucsat.G13116 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10 Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 0
BLAST of Cucsat.G13116 vs. NCBI nr
Match: XP_031737841.1 (uncharacterized protein LOC101204832 [Cucumis sativus] >KGN59178.1 hypothetical protein Csa_000798 [Cucumis sativus]) HSP 1 Score: 235 bits (599), Expect = 8.20e-78 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Cucsat.G13116 vs. NCBI nr
Match: XP_008442891.1 (PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 uncharacterized protein E6C27_scaffold236G001730 [Cucumis melo var. makuwa] >TYK04712.1 uncharacterized protein E5676_scaffold23737G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 233 bits (593), Expect = 6.75e-77 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of Cucsat.G13116 vs. NCBI nr
Match: XP_038905681.1 (uncharacterized protein LOC120091651 [Benincasa hispida]) HSP 1 Score: 227 bits (578), Expect = 1.31e-74 Identity = 116/120 (96.67%), Postives = 116/120 (96.67%), Query Frame = 0
BLAST of Cucsat.G13116 vs. NCBI nr
Match: XP_023528090.1 (early nodulin-20-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216 bits (549), Expect = 9.94e-70 Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0
BLAST of Cucsat.G13116 vs. NCBI nr
Match: XP_023528091.1 (uncharacterized protein LOC111791110 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216 bits (549), Expect = 9.94e-70 Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0
BLAST of Cucsat.G13116 vs. ExPASy TrEMBL
Match: A0A0A0LBI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1) HSP 1 Score: 235 bits (599), Expect = 3.97e-78 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Cucsat.G13116 vs. ExPASy TrEMBL
Match: A0A5A7TLW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23737G00010 PE=4 SV=1) HSP 1 Score: 233 bits (593), Expect = 3.27e-77 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of Cucsat.G13116 vs. ExPASy TrEMBL
Match: A0A1S3B7J8 (uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=4 SV=1) HSP 1 Score: 233 bits (593), Expect = 3.27e-77 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of Cucsat.G13116 vs. ExPASy TrEMBL
Match: A0A6J1F871 (uncharacterized protein LOC111441745 OS=Cucurbita moschata OX=3662 GN=LOC111441745 PE=4 SV=1) HSP 1 Score: 214 bits (546), Expect = 4.82e-70 Identity = 110/120 (91.67%), Postives = 112/120 (93.33%), Query Frame = 0
BLAST of Cucsat.G13116 vs. ExPASy TrEMBL
Match: A0A6J1J6Y2 (uncharacterized protein LOC111481787 OS=Cucurbita maxima OX=3661 GN=LOC111481787 PE=4 SV=1) HSP 1 Score: 214 bits (545), Expect = 1.96e-69 Identity = 110/120 (91.67%), Postives = 112/120 (93.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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