Cp4.1LG15g02090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g02090
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	TPR_REGION domain-containing protein
Location	Cp4.1LG15: 1689155 .. 1690432 (-)
RNA-Seq Expression	Cp4.1LG15g02090
Synteny	Cp4.1LG15g02090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTCAACGAAAAACCCAAAAAGGTAAAACGAAAGAAAACTCTGCCATTTCAAAACCTTCGCAAATTGCAGCTATGGAATCCGCTCTCATCAGAACCGTTTCCGTTCCCGTCCTCTCGTCGGCCGTCGCCGCTTCTTCGTCCTTCTCCAATTACAAACCGTTGTATGGAGCTCTCTCCGGCCAGAACAGTTCCATTTCATCTCCGAAGATCTCTCTGCATTTTGAGATCAATCATCGCAGAGGAAAGAACTGGAGTGGTATTCGAAGAGCGGCATCGGAGAGCGACATATCGCGATCTCTCCACGAGGTTTCGAGTCCGTATGATCAATTCGGTGGATTCAGATCTCGATATTGGTCCGTTCCTTCCGAAATACCAGAGGATGAGTTTCTGAACCAGGATGAATTTCACCGTGGTTCATTTGCGGACACTGAATTTCTAAATTCCGGAATCGTAAGCGGCGATGGCGGTGATTTTGTAGCAGATAAATTTACGGATGGAAGTAGTGAATCTAGTAAGATCAGAGCGTACTACGAAGAGATGCTGAAATCGAACCCTAGCGACGCTCTGATATTGAGAAACTACGGAAAATTCTTACACGAGGTAATCCAAGTCTAGAATTATCAAATTGAAAGTCTGCTTTGATCTGAAATCCTGAAATCCTGAAATCCTGAAATCCTGAAATCTAATGGAATATTACACTTTAATTTCTTTGATTTGATTGATGATGTAAAGGTTGAGAAAGATAGTAAACGAGCAGAGGAATGCTACAGCAGAGCAATACTGGCAAGTCCAAGAGACGGAGAATTGCTGGCTCTATACGGTAAATTAGTATGGGATACTCAAAGAGACAAGCGAAGAGCTCAATATTACTTCGATCGTGCCGTGTGTGCCTCCCCTAACGACTGGTAATTTTCGATATCTGGATCGAGCAGTTTAGCCCTAATTTCATGAACTGGAAGACTCTGAATGTTTGAATTTGTTTGTGAAGTTTGGTGATAGGATATTACGCTCATTTCTTGTGGCTGGTAGAAGACGATGAGGAGGAAGCGATGGCGGTGGCTCCGGCGCCGGCGCCGGCTCTGGTTGCGGCGTTTTAATGGAAGAAATTGGTTTGATGGAGGTTTCGCGGATATAGGAGAGGAAGAATTGAGGGAGAAGTGGCACGTGATTTGTGGACGTGTCATTTCAGGAGGAAATAAAATGCACGTGACTTGTTGGTGTAATGTAAAGTCCCATAATAATAATAATAAAAAAAAACTCTGATTTCTATTTTAAAA

mRNA sequence

ACCTCAACGAAAAACCCAAAAAGGTAAAACGAAAGAAAACTCTGCCATTTCAAAACCTTCGCAAATTGCAGCTATGGAATCCGCTCTCATCAGAACCGTTTCCGTTCCCGTCCTCTCGTCGGCCGTCGCCGCTTCTTCGTCCTTCTCCAATTACAAACCGTTGTATGGAGCTCTCTCCGGCCAGAACAGTTCCATTTCATCTCCGAAGATCTCTCTGCATTTTGAGATCAATCATCGCAGAGGAAAGAACTGGAGTGGTATTCGAAGAGCGGCATCGGAGAGCGACATATCGCGATCTCTCCACGAGGTTTCGAGTCCGTATGATCAATTCGGTGGATTCAGATCTCGATATTGGTCCGTTCCTTCCGAAATACCAGAGGATGAGTTTCTGAACCAGGATGAATTTCACCGTGGTTCATTTGCGGACACTGAATTTCTAAATTCCGGAATCGTAAGCGGCGATGGCGGTGATTTTGTAGCAGATAAATTTACGGATGGAAGTAGTGAATCTAGTAAGATCAGAGCGTACTACGAAGAGATGCTGAAATCGAACCCTAGCGACGCTCTGATATTGAGAAACTACGGAAAATTCTTACACGAGGTTGAGAAAGATAGTAAACGAGCAGAGGAATGCTACAGCAGAGCAATACTGGCAAGTCCAAGAGACGGAGAATTGCTGGCTCTATACGGTAAATTAGTATGGGATACTCAAAGAGACAAGCGAAGAGCTCAATATTACTTCGATCGTGCCGTGTGTGCCTCCCCTAACGACTGTTTGGTGATAGGATATTACGCTCATTTCTTGTGGCTGGTAGAAGACGATGAGGAGGAAGCGATGGCGGTGGCTCCGGCGCCGGCGCCGGCTCTGGTTGCGGCGTTTTAATGGAAGAAATTGGTTTGATGGAGGTTTCGCGGATATAGGAGAGGAAGAATTGAGGGAGAAGTGGCACGTGATTTGTGGACGTGTCATTTCAGGAGGAAATAAAATGCACGTGACTTGTTGGTGTAATGTAAAGTCCCATAATAATAATAATAAAAAAAAACTCTGATTTCTATTTTAAAA

Coding sequence (CDS)

ATGGAATCCGCTCTCATCAGAACCGTTTCCGTTCCCGTCCTCTCGTCGGCCGTCGCCGCTTCTTCGTCCTTCTCCAATTACAAACCGTTGTATGGAGCTCTCTCCGGCCAGAACAGTTCCATTTCATCTCCGAAGATCTCTCTGCATTTTGAGATCAATCATCGCAGAGGAAAGAACTGGAGTGGTATTCGAAGAGCGGCATCGGAGAGCGACATATCGCGATCTCTCCACGAGGTTTCGAGTCCGTATGATCAATTCGGTGGATTCAGATCTCGATATTGGTCCGTTCCTTCCGAAATACCAGAGGATGAGTTTCTGAACCAGGATGAATTTCACCGTGGTTCATTTGCGGACACTGAATTTCTAAATTCCGGAATCGTAAGCGGCGATGGCGGTGATTTTGTAGCAGATAAATTTACGGATGGAAGTAGTGAATCTAGTAAGATCAGAGCGTACTACGAAGAGATGCTGAAATCGAACCCTAGCGACGCTCTGATATTGAGAAACTACGGAAAATTCTTACACGAGGTTGAGAAAGATAGTAAACGAGCAGAGGAATGCTACAGCAGAGCAATACTGGCAAGTCCAAGAGACGGAGAATTGCTGGCTCTATACGGTAAATTAGTATGGGATACTCAAAGAGACAAGCGAAGAGCTCAATATTACTTCGATCGTGCCGTGTGTGCCTCCCCTAACGACTGTTTGGTGATAGGATATTACGCTCATTTCTTGTGGCTGGTAGAAGACGATGAGGAGGAAGCGATGGCGGTGGCTCCGGCGCCGGCGCCGGCTCTGGTTGCGGCGTTTTAA

Protein sequence

MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNWSGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRGSFADTEFLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEEAMAVAPAPAPALVAAF

Homology

[Close]

BLAST of Cp4.1LG15g02090 vs. NCBI nr
Match: XP_023554672.1 (uncharacterized protein LOC111811867 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 534 bits (1376), Expect = 2.29e-191
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRGSFADTE 120
           SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRGSFADTE
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRGSFADTE 120

Query: 121 FLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180
           FLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD
Sbjct: 121 FLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180

Query: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240
           SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY
Sbjct: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240

Query: 241 AHFLWLVEDDEEEAMAVAPAPAPALVAAF 269
           AHFLWLVEDDEEEAMAVAPAPAPALVAAF
Sbjct: 241 AHFLWLVEDDEEEAMAVAPAPAPALVAAF 269

[Close]

BLAST of Cp4.1LG15g02090 vs. NCBI nr
Match: XP_022963763.1 (uncharacterized protein LOC111463957 [Cucurbita moschata])

HSP 1 Score: 528 bits (1359), Expect = 8.96e-189
Identity = 266/269 (98.88%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRGSFADTE 120
           SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHR SFADTE
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRDSFADTE 120

Query: 121 FLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180
           FLNSGIVSGDGGDFVADKF+DGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD
Sbjct: 121 FLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180

Query: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240
           SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY
Sbjct: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240

Query: 241 AHFLWLVEDDEEEAMAVAPAPAPALVAAF 269
           AHFLWLVEDDEEEA AVAPAPAPALVAAF
Sbjct: 241 AHFLWLVEDDEEEATAVAPAPAPALVAAF 269

[Close]

BLAST of Cp4.1LG15g02090 vs. NCBI nr
Match: KAG6571653.1 (hypothetical protein SDJN03_28381, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011382.1 hypothetical protein SDJN02_26287 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 526 bits (1356), Expect = 2.57e-188
Identity = 265/269 (98.51%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRGSFADTE 120
           SGIRRAASESDI+RSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHR SFADTE
Sbjct: 61  SGIRRAASESDITRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRDSFADTE 120

Query: 121 FLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180
           FLNSGIVSGDGGDFVADKF+DGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD
Sbjct: 121 FLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180

Query: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240
           SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY
Sbjct: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240

Query: 241 AHFLWLVEDDEEEAMAVAPAPAPALVAAF 269
           AHFLWLVEDDEEEA AVAPAPAPALVAAF
Sbjct: 241 AHFLWLVEDDEEEATAVAPAPAPALVAAF 269

[Close]

BLAST of Cp4.1LG15g02090 vs. NCBI nr
Match: XP_022967316.1 (uncharacterized protein LOC111466874 [Cucurbita maxima])

HSP 1 Score: 511 bits (1315), Expect = 4.74e-182
Identity = 261/270 (96.67%), Postives = 263/270 (97.41%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRGSFADTE 120
           SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPS IPE+EFLNQDEFHR S ADTE
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSGIPEEEFLNQDEFHRDSVADTE 120

Query: 121 FLNSGIVSGDGGDFVA-DKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEK 180
           FLNSGIVSGDGGDFVA DKFTDGSSESSKIRAYYEEMLKSNPSD LILRNYGKFLHEVEK
Sbjct: 121 FLNSGIVSGDGGDFVATDKFTDGSSESSKIRAYYEEMLKSNPSDPLILRNYGKFLHEVEK 180

Query: 181 DSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGY 240
           D+KRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGY
Sbjct: 181 DTKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGY 240

Query: 241 YAHFLWLVEDDEEEAMAVAPAPAPALVAAF 269
           YAHFLWLVEDDEEEA AVA APAPALVAAF
Sbjct: 241 YAHFLWLVEDDEEEATAVALAPAPALVAAF 270

[Close]

BLAST of Cp4.1LG15g02090 vs. NCBI nr
Match: XP_022930988.1 (uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothetical protein SDJN02_03004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (919), Expect = 9.61e-122
Identity = 190/273 (69.60%), Postives = 223/273 (81.68%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           M+SAL+RTVS+PV+  +  ASSSFSNY+PL+G  +G  SS+SSPKISLHFE+N+ RG+N 
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGF--RSRYWSVPSEIPEDEFLNQDEFHRGSFAD 120
           SGIRRA+SESDISRSLHEVS+PYDQFGG   RSR  S  SEIPE+EFLNQDEF   S  D
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120

Query: 121 TE-FLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEV 180
               L+SGI   DG +F  D F DGS++ +KI AYYEE+LK NP+DAL+LRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180

Query: 181 EKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVI 240
           EKD  R+EECYSRAILA+P DGELLALYGKLVW++ +DK+RA+YYFDRAV ASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240

Query: 241 GYYAHFLWLVEDDEEEAMA-VAPAPAPALVAAF 269
           GYYA+FLW +EDDEEE  A V PA   A+VAAF
Sbjct: 241 GYYAYFLWQIEDDEEEEAAEVWPA---AMVAAF 270

[Close]

BLAST of Cp4.1LG15g02090 vs. ExPASy TrEMBL
Match: A0A6J1HIV3 (uncharacterized protein LOC111463957 OS=Cucurbita moschata OX=3662 GN=LOC111463957 PE=4 SV=1)

HSP 1 Score: 528 bits (1359), Expect = 4.34e-189
Identity = 266/269 (98.88%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRGSFADTE 120
           SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHR SFADTE
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRDSFADTE 120

Query: 121 FLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180
           FLNSGIVSGDGGDFVADKF+DGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD
Sbjct: 121 FLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKD 180

Query: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240
           SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY
Sbjct: 181 SKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYY 240

Query: 241 AHFLWLVEDDEEEAMAVAPAPAPALVAAF 269
           AHFLWLVEDDEEEA AVAPAPAPALVAAF
Sbjct: 241 AHFLWLVEDDEEEATAVAPAPAPALVAAF 269

[Close]

BLAST of Cp4.1LG15g02090 vs. ExPASy TrEMBL
Match: A0A6J1HRN2 (uncharacterized protein LOC111466874 OS=Cucurbita maxima OX=3661 GN=LOC111466874 PE=4 SV=1)

HSP 1 Score: 511 bits (1315), Expect = 2.29e-182
Identity = 261/270 (96.67%), Postives = 263/270 (97.41%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFHRGSFADTE 120
           SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPS IPE+EFLNQDEFHR S ADTE
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSGIPEEEFLNQDEFHRDSVADTE 120

Query: 121 FLNSGIVSGDGGDFVA-DKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEK 180
           FLNSGIVSGDGGDFVA DKFTDGSSESSKIRAYYEEMLKSNPSD LILRNYGKFLHEVEK
Sbjct: 121 FLNSGIVSGDGGDFVATDKFTDGSSESSKIRAYYEEMLKSNPSDPLILRNYGKFLHEVEK 180

Query: 181 DSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGY 240
           D+KRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGY
Sbjct: 181 DTKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGY 240

Query: 241 YAHFLWLVEDDEEEAMAVAPAPAPALVAAF 269
           YAHFLWLVEDDEEEA AVA APAPALVAAF
Sbjct: 241 YAHFLWLVEDDEEEATAVALAPAPALVAAF 270

[Close]

BLAST of Cp4.1LG15g02090 vs. ExPASy TrEMBL
Match: A0A6J1EX26 (uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC111437316 PE=4 SV=1)

HSP 1 Score: 358 bits (919), Expect = 4.65e-122
Identity = 190/273 (69.60%), Postives = 223/273 (81.68%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           M+SAL+RTVS+PV+  +  ASSSFSNY+PL+G  +G  SS+SSPKISLHFE+N+ RG+N 
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGF--RSRYWSVPSEIPEDEFLNQDEFHRGSFAD 120
           SGIRRA+SESDISRSLHEVS+PYDQFGG   RSR  S  SEIPE+EFLNQDEF   S  D
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120

Query: 121 TE-FLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEV 180
               L+SGI   DG +F  D F DGS++ +KI AYYEE+LK NP+DAL+LRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180

Query: 181 EKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVI 240
           EKD  R+EECYSRAILA+P DGELLALYGKLVW++ +DK+RA+YYFDRAV ASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240

Query: 241 GYYAHFLWLVEDDEEEAMA-VAPAPAPALVAAF 269
           GYYA+FLW +EDDEEE  A V PA   A+VAAF
Sbjct: 241 GYYAYFLWQIEDDEEEEAAEVWPA---AMVAAF 270

[Close]

BLAST of Cp4.1LG15g02090 vs. ExPASy TrEMBL
Match: A0A6J1K5B2 (uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 3.61e-119
Identity = 188/273 (68.86%), Postives = 221/273 (80.95%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           M+SAL RTVS+PV+S +  ASSSFSNY+PL+G  +G  SS+SSPKISL FE+N+ RG+N 
Sbjct: 1   MKSALFRTVSIPVISPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLLFEMNNPRGRNS 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGF--RSRYWSVPSEIPEDEFLNQDEFHRGSFA- 120
           SGIRR +SESDISRSLHEVS+PYDQFGG   RSR  S  SEIPE+EFLNQDEF   S   
Sbjct: 61  SGIRRVSSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMEE 120

Query: 121 DTEFLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEV 180
           D+  L+SGI   DG +F  D F DGS++ +KI AYYEE+LK NP+DAL+LRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180

Query: 181 EKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVI 240
           EKD  R+EECYSRAILA+P DGELLALYGKLVW++ +DK+RA+YYFDRAV ASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240

Query: 241 GYYAHFLWLVEDDEE-EAMAVAPAPAPALVAAF 269
           G YA+FLW +EDDEE EA  V PA   A+VAAF
Sbjct: 241 GCYAYFLWQIEDDEEQEAAEVWPA---AMVAAF 270

[Close]

BLAST of Cp4.1LG15g02090 vs. ExPASy TrEMBL
Match: A0A6J1DU99 (uncharacterized protein LOC111023531 OS=Momordica charantia OX=3673 GN=LOC111023531 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 5.77e-102
Identity = 181/303 (59.74%), Postives = 208/303 (68.65%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60
           M+SAL RT SVPV+S A A S SFSNY+P +       S +SSPKISLHFEINHRRG   
Sbjct: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPFH------KSYVSSPKISLHFEINHRRGAKS 60

Query: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQ------------ 120
           SGIRRA+SESDI+RSLH++S+ YDQ GG  SR  S PS IPEDEFLN+            
Sbjct: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGSR--SFPSGIPEDEFLNESRDAVAEEWIIQ 120

Query: 121 ---DEFHRGSFA-----------DTEFLNSGIVSGDGGDFVADKFTDGSSESSKIRAYYE 180
              DEF   ++A           +  F  SGI  G GG+ V D F+ GSS+ SKI AYYE
Sbjct: 121 EDEDEFDISNYAGDFSGGAISMKNAGFFGSGI--GSGGNIVTDTFSGGSSDRSKIGAYYE 180

Query: 181 EMLKSNPSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQR 240
           EMLK NPSD+L+LRNYGKFLHEVE D+ RAEE Y RAILASP DGELL+LYGKLVW+TQR
Sbjct: 181 EMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQR 240

Query: 241 DKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEE--------AMAVAPAPAPALV 269
           D++RA+ YFDRAV ASP+DC V+G YAHFLW VE DEEE        A   A  P  ALV
Sbjct: 241 DEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEAAAAEKAEVPPAALV 293

[Close]

BLAST of Cp4.1LG15g02090 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 4.4e-43
Identity = 117/296 (39.53%), Postives = 160/296 (54.05%), Query Frame = 0


Query: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPL-----YGALSGQNSSISSPKISLHFEINHR 60
           M+S L+RT S+PVL + + +  S     P+       +LS      +  KIS+  + N  
Sbjct: 1   MKSLLMRTGSMPVLQNRLISGGSSRKMTPISRTNSVESLSSYGERFAGGKISIEVKAN-- 60

Query: 61  RGKNWSGIRRAASESDISRS---LHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLNQDEFH 120
                 G+RR  SESD+ RS   L  V S               P+ IPED+   ++E  
Sbjct: 61  -----VGMRRVLSESDVIRSERMLKRVGSK------------PSPARIPEDDEAGEEEIR 120

Query: 121 RGSFAD--------------TEFLNSGIVSGDG-GDFVADKFTDGSSESSKIRAYYEEML 180
              FAD                F   G+  G G      +    G  + SKI  YY EML
Sbjct: 121 ---FADGWGSMISGGLPVEEKCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGDYYREML 180

Query: 181 KSNPSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKR 240
           +SNP+++L+L NYGKFL+EVEKD++ AEE Y RAIL +P DGE L++YG+L+W+T+RD++
Sbjct: 181 RSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEK 240

Query: 241 RAQYYFDRAVCASPNDCLVIGYYAHFLWLVEDD--------EEEAMAVAPAPAPAL 266
           RAQ YFD+AV ASPNDC+V+G YA F+W  EDD        EEE MA +P    A+
Sbjct: 241 RAQGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEEEEWMAASPLMVSAV 274

[Close]

BLAST of Cp4.1LG15g02090 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 4.4e-27
Identity = 89/273 (32.60%), Postives = 132/273 (48.35%), Query Frame = 0


Query: 5   LIRTVSVPVLSSAVAASS-------------SFSNYKPLYGALSGQNSSISSPKISLHFE 64
           L+R+ S P+L+S V  SS                 ++ +   LS  +SS     +S+H  
Sbjct: 2   LLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSI--TLSASSSSCCYSPMSVHSS 61

Query: 65  INHRRGKNWSGIRRAASESDISRSLHEVSSPYDQF--GGFRSRYWSVPSEIPED---EFL 124
            +  R      ++R AS+SD+ R L     P  +F  GG      ++  ++ E      +
Sbjct: 62  DDSSR-----RMKRTASDSDL-RHLTSTKPPVSKFLSGG------ALMEDVDEGIGFGLI 121

Query: 125 NQDEFHRGSFA---DTEFL---NSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSN 184
               +   S+A   DTE       G+  G G      +   G         +Y +M+++N
Sbjct: 122 RTSSYDGISWALDEDTEVAGGGGGGMFHGGGKGRSGGRSDGGDGGDDNTDVHYRKMIEAN 181

Query: 185 PSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQ 244
           P + + L NY KFL EV KD  +AEE   RAIL SP DG +LA+Y +LVW   +D  RA+
Sbjct: 182 PGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSRAE 241

Query: 245 YYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEE 254
            YF++AV A+P DC V   YA FLW  E++EEE
Sbjct: 242 NYFNQAVAAAPEDCYVQASYARFLWDAEEEEEE 260

[Close]

BLAST of Cp4.1LG15g02090 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 6.4e-26
Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 0


Query: 123 NSGIVSGDGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKDSK 182
           ++G   G GGD        G      +  YYEEM++  P D L+L NY +FL EV+ D +
Sbjct: 87  SNGGFGGRGGDGAGG---GGGGGGGSVDGYYEEMIQRYPGDTLLLSNYARFLKEVKGDGR 146

Query: 183 RAEECYSRAILA-SPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYYA 242
           +AEE   RA+L+ S RDGELL++YG L+W    D  RAQ Y+D+AV +SP+DC V+  YA
Sbjct: 147 KAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPDDCNVLASYA 206

Query: 243 HFLWLVEDDEEE 254
            FLW  E++ EE
Sbjct: 207 RFLWDAEEEVEE 215

[Close]

BLAST of Cp4.1LG15g02090 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 7.1e-25
Identity = 55/124 (44.35%), Postives = 74/124 (59.68%), Query Frame = 0


Query: 130 DGGDFVADKFTDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEVEKDSKRAEECYS 189
           +GG  V     DG         YY EM+ SNP ++L+  NY KFL EV+ D K+AEE   
Sbjct: 146 NGGGGVGGSGVDGGRSEDATDTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCE 205

Query: 190 RAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVED 249
           RAIL +  DG +L+LY  L+    +D++RA  Y+ +AV  SP DC V   YA FLW V++
Sbjct: 206 RAILGNTNDGNVLSLYADLILHNHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDE 265

Query: 250 DEEE 254
           DEE+
Sbjct: 266 DEED 269

[Close]

BLAST of Cp4.1LG15g02090 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 7.6e-19
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 152 YYEEMLKSNPSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWD 211
           YY+ ML+  P   L+L+NY KFL E + D   AEE Y +  +  P DG  LA YG+LV  
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 183

Query: 212 TQRDKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEE 254
             +D+ +A  YF+RAV ASP+D +V+  YA FLW +  D+++
Sbjct: 184 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDD 224

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g02090 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG15g02090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554672.1	2.29e-191	100.00	uncharacterized protein LOC111811867 [Cucurbita pepo subsp. pepo]	[more]
XP_022963763.1	8.96e-189	98.88	uncharacterized protein LOC111463957 [Cucurbita moschata]	[more]
KAG6571653.1	2.57e-188	98.51	hypothetical protein SDJN03_28381, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022967316.1	4.74e-182	96.67	uncharacterized protein LOC111466874 [Cucurbita maxima]	[more]
XP_022930988.1	9.61e-122	69.60	uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothet...	[more]

BLAST of Cp4.1LG15g02090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIV3	4.34e-189	98.88	uncharacterized protein LOC111463957 OS=Cucurbita moschata OX=3662 GN=LOC1114639...	[more]
A0A6J1HRN2	2.29e-182	96.67	uncharacterized protein LOC111466874 OS=Cucurbita maxima OX=3661 GN=LOC111466874...	[more]
A0A6J1EX26	4.65e-122	69.60	uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K5B2	3.61e-119	68.86	uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305...	[more]
A0A6J1DU99	5.77e-102	59.74	uncharacterized protein LOC111023531 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Cp4.1LG15g02090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17940.1	4.4e-43	39.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G20190.1	4.4e-27	32.60	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	6.4e-26	45.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	7.1e-25	44.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	7.6e-19	44.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 142..244 e-value: 9.2E-12 score: 46.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 150..252
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..255
None	No IPR available	PANTHER	PTHR26312:SF123	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 1..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g02090.1	Cp4.1LG15g02090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding