Cucsat.G4267 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAATTTACAGAAACGAAGAAGACGAAGAAAAAACATTCACAAACGCCTCTAATGGCGCAGGCCGTTCAGAAAAACACTCTATACGTCGGTGGTTTAGCGGAGGAGGTGAACGAATCTATTCTTCACGCAGCCTTCATTCCCTTCGGCGACATCAAAGACGTCAAGACGCCATTGGATCAAGCCACTCAGAAGCACCGTTCCTTCGGCTTCGTCACTTTCTTGGAAAAGGAAGATGCATCCGCTGCTATGGATAATATGGACGGTGCTGAGCTTTATGGTCGTGTGCTTACTGTTAACTATGCCCTCCCTGAGCGTATCAAGGGTGGTGAACAAGGATGGGCTGCTCAACCTAGTAAGTTCCCTGATTCCTTAAACCCTAGTTCTCATCCTTTATTCATTCTCTGCATTTCTAATATGTTGTTTCTGTTGCTTCCCATTGAGGTGCATGTACTTCATTAATTACTAGTTTTGCTGTGATTTCATGCTTGTGATAGGAGTTCTTGAGAATGGGAATTTGAACTTAGAATGATGCTTGGGTGTGTAGGTGATCTTTTGTGTGTTTTTAATCTTTAATTTTCATTCTTTCAATTTCAATTGTTTTGTTAATGCAATGAAAAGTTCAGCCAAGGTGATTTCTAATTTTATTTCTAATCAAGTGCATCATCGTAAACCACGTGTTTGGATGCCATACTAAAGTTTAAAAAACAAAGACTGAAATTGGGTTTTATGCAAACATTAGAAATTGAACCAAAGCTTTGGTAAAAACTAAATTTTGGTGAAGTTTAGGGTCAAAATTAGATTCAAACTTGAAACCTTAGGACGTTCCATGTACAATGATTTGTTAAAGAATTGTGTAAATGCAAACTCTGGCAGTTATACTTATACTGCAGAAATGAGATTGAACCATACGATGTTATCAATTTCGAATAACCCAACTTTCGATGAGAAAAAAATGAGAGAATTTGGACGGAGTTTAATTTCAGAGGTTAGTTTGAAGTTATACTTACGACATGATTTGAAAAGGGGAGATTTAGGATTTATTTAGATTATGGCGGTGTGTCTAAATCTCCTACCTTGGATGCTGATTTTTTCCAGTTTTGAGATGAGAATCAATTGAGTATTTCTTCCTTTCCTGCCAAGATGAGCGTAATTTAGTAGTTAAGGTATCGACTTGTTGTCCTGACCTTTGAGGTTCAAATTTGCAGTCCTTCATTTGTTGTATTTGTACAAAACAAAAATTTATTCCATTTCCTTGACTGTCCTTTTATTTCTCTTTTTCCCCAATATTCATGTTCTCGGGTATCATCGCTACTTGTTCTTAATCTTTTATGAGTTGAGAATTGAGTGTATGAAGTTTTTCTGTATGTTTATTATCGAGTGCCTGGTTCACTCTGATTGCATCAACTCTTCAGAGTTGTCTTCTTAGCACTTAAGGACACAGTTGCACAACCTATTAAGACAGCTCCTGTTCAAGTAAGGACGTGTCTCAACCCGTGCATCTTGGTGATTGTGAATTGTTGACTGGTGTAAAGGCCTGTTATTGGCAATCAGTAGCCTTGTTTACTTCTCGTTCCTTCTCCATTTCACTGGACCATTTCGTATGATTGAAATATGTCAGATTGCAATATTGATCTTACAAATGGGTCAGAGTGAGCGATGCTTCCCATCTTCTTCTCCTAAACCTTACGAAATAAATGATTTTGCTTAATATTCCAGTTTGGGCGGATGCGGATACGTGGTTTGAAAGGCAGCAACAAGAGGAGGAAATGCAGCGTCTTCAAGCTGAGAATCGAGCAGCTATGGAGGCTGCGGAGGAGCTGCACAGGAAGAAACTAGCGCAGGAACGAGAAGGGGAGAAAGACGAGGAGGTAGACACCAAGGTCGATCCCATGGCTAAGGCTGAAGCTGAGGTTTTAAGACAGAACAGTTGAAAACCTACCATTCTGTGAGGTTCCTCTTCACAATGACATTCTCCTTCTGCTCCCGTAGTTAATTCCATTCACAAAGTATAGTTTTGATAAGCTGAAAAATATTCACATTTCATGAATTTTTGTAATCTTATTGGAAAAGAATACCTTAGAAAGTAGGAGTTTTAAATCTGGCAGCACTGTTGTTTTAGTTCACCCCTTCCTCCGCTTTGTTCTTTTAATTCCATTGAATTTTTTTTTTTTTTCCTTTCCTCAGAAAAATTAACAATTTATATTCTTTACATTTTGTAGTCTTCGAATGTTGATACGTTTTTTAAAACATGAGTAAAATGTAGATTTCA AAATTTACAGAAACGAAGAAGACGAAGAAAAAACATTCACAAACGCCTCTAATGGCGCAGGCCGTTCAGAAAAACACTCTATACGTCGGTGGTTTAGCGGAGGAGGTGAACGAATCTATTCTTCACGCAGCCTTCATTCCCTTCGGCGACATCAAAGACGTCAAGACGCCATTGGATCAAGCCACTCAGAAGCACCGTTCCTTCGGCTTCGTCACTTTCTTGGAAAAGGAAGATGCATCCGCTGCTATGGATAATATGGACGGTGCTGAGCTTTATGGTCGTGTGCTTACTGTTAACTATGCCCTCCCTGAGCGTATCAAGGGTGGTGAACAAGGATGGGCTGCTCAACCTATTTGGGCGGATGCGGATACGTGGTTTGAAAGGCAGCAACAAGAGGAGGAAATGCAGCGTCTTCAAGCTGAGAATCGAGCAGCTATGGAGGCTGCGGAGGAGCTGCACAGGAAGAAACTAGCGCAGGAACGAGAAGGGGAGAAAGACGAGGAGGTAGACACCAAGGTCGATCCCATGGCTAAGGCTGAAGCTGAGGTTTTAAGACAGAACAGTTGA KFTETKKTKKKHSQTPLMAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTKVDPMAKAEAEVLRQNS Homology
BLAST of Cucsat.G4267 vs. ExPASy Swiss-Prot
Match: A4FV72 (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus OX=9913 GN=PPIE PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 8.0e-28 Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Cucsat.G4267 vs. ExPASy Swiss-Prot
Match: Q9QZH3 (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus OX=10090 GN=Ppie PE=1 SV=2) HSP 1 Score: 125.2 bits (313), Expect = 8.0e-28 Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Cucsat.G4267 vs. ExPASy Swiss-Prot
Match: Q5R723 (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii OX=9601 GN=PPIE PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 8.8e-27 Identity = 67/139 (48.20%), Postives = 91/139 (65.47%), Query Frame = 0
BLAST of Cucsat.G4267 vs. ExPASy Swiss-Prot
Match: Q9UNP9 (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens OX=9606 GN=PPIE PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.8e-25 Identity = 66/153 (43.14%), Postives = 96/153 (62.75%), Query Frame = 0
BLAST of Cucsat.G4267 vs. ExPASy Swiss-Prot
Match: Q9V3G3 (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster OX=7227 GN=cyp33 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21 Identity = 62/152 (40.79%), Postives = 89/152 (58.55%), Query Frame = 0
BLAST of Cucsat.G4267 vs. NCBI nr
Match: XP_004144165.1 (peptidyl-prolyl cis-trans isomerase E [Cucumis sativus] >KGN47657.1 hypothetical protein Csa_018234 [Cucumis sativus]) HSP 1 Score: 328 bits (842), Expect = 6.52e-113 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cucsat.G4267 vs. NCBI nr
Match: XP_008445441.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase E [Cucumis melo]) HSP 1 Score: 323 bits (829), Expect = 6.26e-111 Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0
BLAST of Cucsat.G4267 vs. NCBI nr
Match: KAA0064773.1 (peptidyl-prolyl cis-trans isomerase E [Cucumis melo var. makuwa]) HSP 1 Score: 322 bits (825), Expect = 2.55e-110 Identity = 168/171 (98.25%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Cucsat.G4267 vs. NCBI nr
Match: XP_038884408.1 (peptidyl-prolyl cis-trans isomerase E [Benincasa hispida]) HSP 1 Score: 320 bits (820), Expect = 1.47e-109 Identity = 166/171 (97.08%), Postives = 169/171 (98.83%), Query Frame = 0
BLAST of Cucsat.G4267 vs. NCBI nr
Match: XP_022132314.1 (peptidyl-prolyl cis-trans isomerase E [Momordica charantia] >XP_022132315.1 peptidyl-prolyl cis-trans isomerase E [Momordica charantia]) HSP 1 Score: 317 bits (813), Expect = 1.78e-108 Identity = 163/169 (96.45%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of Cucsat.G4267 vs. ExPASy TrEMBL
Match: A0A0A0KGY3 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366550 PE=4 SV=1) HSP 1 Score: 328 bits (842), Expect = 3.16e-113 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cucsat.G4267 vs. ExPASy TrEMBL
Match: A0A1S3BCQ8 (peptidyl-prolyl cis-trans isomerase E OS=Cucumis melo OX=3656 GN=LOC103488462 PE=4 SV=1) HSP 1 Score: 323 bits (829), Expect = 3.03e-111 Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0
BLAST of Cucsat.G4267 vs. ExPASy TrEMBL
Match: A0A5A7V9E9 (Peptidyl-prolyl cis-trans isomerase E OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00780 PE=4 SV=1) HSP 1 Score: 322 bits (825), Expect = 1.23e-110 Identity = 168/171 (98.25%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Cucsat.G4267 vs. ExPASy TrEMBL
Match: A0A6J1BSQ7 (peptidyl-prolyl cis-trans isomerase E OS=Momordica charantia OX=3673 GN=LOC111005196 PE=4 SV=1) HSP 1 Score: 317 bits (813), Expect = 8.62e-109 Identity = 163/169 (96.45%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of Cucsat.G4267 vs. ExPASy TrEMBL
Match: A0A6J1K4K2 (peptidyl-prolyl cis-trans isomerase E OS=Cucurbita maxima OX=3661 GN=LOC111492233 PE=4 SV=1) HSP 1 Score: 317 bits (812), Expect = 1.18e-108 Identity = 163/171 (95.32%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Cucsat.G4267 vs. TAIR 10
Match: AT1G13690.1 (ATPase E1 ) HSP 1 Score: 284.6 bits (727), Expect = 5.6e-77 Identity = 140/165 (84.85%), Postives = 157/165 (95.15%), Query Frame = 0
BLAST of Cucsat.G4267 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 ) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15 Identity = 41/101 (40.59%), Postives = 64/101 (63.37%), Query Frame = 0
BLAST of Cucsat.G4267 vs. TAIR 10
Match: AT3G08000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Cucsat.G4267 vs. TAIR 10
Match: AT4G13850.4 (glycine-rich RNA-binding protein 2 ) HSP 1 Score: 69.3 bits (168), Expect = 3.7e-12 Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Cucsat.G4267 vs. TAIR 10
Match: AT4G39260.3 (cold, circadian rhythm, and RNA binding 1 ) HSP 1 Score: 68.6 bits (166), Expect = 6.3e-12 Identity = 37/86 (43.02%), Postives = 50/86 (58.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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