Cucsat.G2300 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGCTTAAACATAGATGGTAGATGGATAGACATGATGAATTTCAAGATAATTGCTCCACTCCATTCCATATAGTGTTAAAAGGAACCTGAAAAATAAAAATGGGAGAAAGTGATTTTTGATTGAGCTGCTCTCATTTTAAGTATTATTATATTCCATCTTGGTTGGAGTTAGGGGGAGGAAGCCATAGTCCGTGTCGGCATCGAACTCCGATTAGTCAAGGTCAGGGAAGCGTTGCATTTGCCGGAGGAACATCAAAATTTCGTATTGCATACATTCATATCCTCAAATGTCAAAATCTATGCGGATTTTGATACTTTTAGGAGGTAAACGACCTTGGGGAGCAAGGCAACTCCGGAGGGTAAATACCCCAAGCTGACTTTCAATCAATTTCATTACCGATTGACATGGGTTTTTGGCTCAACCCACGATTCTTCATAACCTCCTAATAAAGCCCCTTCACTCAACAAACAATGCTCACTTTTCGCTCTATTTTCTCAACCTCCAAACATCACTCCCGTCAGGCTCCATCTGTATTTCAAAGGTTTTTCCCTTAAACCCCCTTTTGTACCCATTCCCGCTGGTTATGTTGCGTTTTATTACTGTTTATATGCCTTTCTATTATCTTTCTCTCAATCCAAATCCCGCATGTGCAAATAATTATCCCGCTGAGTTGGTTTCTGCTTTCTATCAATGCAATTCCATGTTTTGGTTTATCAATAACTTACTTTAAATTGTTAACTGGAGGCATACGGCTGTGACTATATTTGTATTGGGATCGTTCTTTCCAGTGAACCTGGTTAATTTTGAATTTTGGCGTAGGTTACATCCATCAATTAGCGTTCTGTCCTGCAAATGTTCCACATCATCAAAATACAGCAAGGAAAGACCTGAAGTTCCTCTTCTATCCGCAGATGGACATACTTCTTCTTCATGGACTACTTATATCATTGTATGACCTGATCTCATCTTTTAGTTTCAAGTTTCTCCTTGTTGGGTAAATATAGTTTTGTGAAGACGTTTTAAATTGGCCTTCTTTTGTGTTTCGTTACATTACTATTCTATACTAATCATCATAATGCCTTTTTGAATTTCTTTGCTTTACTTTTATTATTTTTGTTTTTGTGCAGCCAGCTGCGGTGATGGGTTTTGTTGGGTTAGCAGCCTTTGTACATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGTTACTATCTTTGTGCTCTTCTGTCGATTTTTTGCTGCCATTACAATTAGTTTCAGTAATTTATTGTCTGCATTAAGATACGAGAAAGATTATATGGCACTAGCAGTCGTGTTAGGACTTGGGACGACCTCAAGAAACCATAGATAGTTGTGGAACCATCCAGTAGTTGTGAATTTCCTAGACTTCTATATGCTCAGGTAGAGAGATGAGAAAGTAGAAGATGGAAAAAGCTTGAATGGGCTGAACAATAACCTCTTTATATGTGGATTATGAAAATGTCAGATTTGTGTCTATGAACAGGCATTATATATACATATCCTACTTGCGTAATCTGATTATATCTAAACTGTACGATGAAGTTATGGGCTGTTACAACTCACGATGTGGATGGCAGGGGTTAACTTATTGAAATTAATGTTGTAATATACTGTACGATCAAGTTTATGCTCTGAAGATTTGACATCCGCCTGACTTTTAGTTATCCCGTGGCAGCATGTAGTATACTTTTTAGATTGATTTTAGGGGCCATGTTTTAGTGCTTCAGATTTAAAGACAACTAAAGTGTCTTCTTTGATTCAGGACAGGGAAACACGTGCGAAAACATAGTTAAAGGACCAGTTATTGGGGGCCCATTTTCTCTTATCGATACAGAGAAAAGAAATGTAACAGAGAAAGATCTTCGGGGGAACTGGACTCTGCTCTACTTTGGATACACTTCGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAGACATATTAGGTATTCGACTACTTTAAAACATGCAACTTTGGATTATTGTTGCCGTGTACTTCCACTCTTGTTTTAATTACTTGTTTGTTGTTCTGTGAATAAGAATCTAGACATAAATTCAAGGTTCTACCTATATTCGTGACAATTGATCCACAACGGGATAACCCATCACATCTTCGTGCTTATCTTAAAGGTCAGTCTTTACCTCTTCATGAAGATTGTCAAGATAAATATATTTTGGCGGAGGTTTATCTTATCTTTCCTATCATTTATGGACTGCAGAGTTCGATTCAAGAATTATAGGACTAACTGGGCCAGTTGCAGCAGTAAGGCAAATGGCACAGGAATACCGAGTTTACTTTAAGAAGGTTGAGGAGGAAGGCAATGATTATCTTATCGATACTTCACACAAAATGTAAGCCACCTGACACAATCGAATCTACTTCTCATATTATGACTTGAACAATGTATTATGTATGTATGACGGGGAAAAACGATCAGGTATTTGTTGAGTCCAAACCTGGAGGTTTTGAGATGCTTTGGAATGGAGTACAATGCTGAAGAGGTTTCACAAGCCATACTGAACGTACTTCAGAAAACTCCTCAATAACGCCCTACAGGTCTTCAACTTCTCTCCTATGCATTCCTATTTGTTCTAAATTTCTTTTTAGTCATCCAGTAAAGCACTTGAGACGTCGGCTTAACATTATTACCTGAATTTGAACCCTTTAGAAGTCCATTCGTAGTACAATACGGTAAACAGAAAAGGCAATTTTTTTGTTCAGCAATTGTTTCAACTTTATAACTTGGGTATAGAATCACTATAATCCGTTGAACTCTCCAGCTTGCTTGATTATGATTCTTTGATTTAAAGATGGTTCGACTGCAGTCTTGAACCTCTTCTTTCATTTCTTTGTCTGCAATATAAAATAAACGGGAAATCACTATCCTCTCAGACCACGTATCTCAATTCTCGACCTGTTAGGTTCTTCATTGGTAAATCTTTGATCTAGAGCTTGTAGGAGAAGCAGGAATACCCATAGAAGATGATGATTTTGTTGGTCCTAAAGTACTGTAATGAATGAAATGCTGATTGATTTGATTTCATAATACTTCTACTATAAGAAACTTTATTTTGGCTTAGTTTGGTTTTGGATTGATGGAGAGAAATTACTGTAGGGGCAAGAATGTTGTGTTTACTTGAAAATGTATCAACATCTATAGCCACACCTAAGTCTGTTTATTAGT ATGCTCACTTTTCGCTCTATTTTCTCAACCTCCAAACATCACTCCCGTCAGGCTCCATCTGTATTTCAAAGGTTACATCCATCAATTAGCGTTCTGTCCTGCAAATGTTCCACATCATCAAAATACAGCAAGGAAAGACCTGAAGTTCCTCTTCTATCCGCAGATGGACATACTTCTTCTTCATGGACTACTTATATCATTCCAGCTGCGGTGATGGGTTTTGTTGGGTTAGCAGCCTTTGTACATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGACAGGGAAACACGTGCGAAAACATAGTTAAAGGACCAGTTATTGGGGGCCCATTTTCTCTTATCGATACAGAGAAAAGAAATGTAACAGAGAAAGATCTTCGGGGGAACTGGACTCTGCTCTACTTTGGATACACTTCGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAGACATATTAGAATCTAGACATAAATTCAAGGTTCTACCTATATTCGTGACAATTGATCCACAACGGGATAACCCATCACATCTTCGTGCTTATCTTAAAGAGTTCGATTCAAGAATTATAGGACTAACTGGGCCAGTTGCAGCAGTAAGGCAAATGGCACAGGAATACCGAGTTTACTTTAAGAAGGTTGAGGAGGAAGGCAATGATTATCTTATCGATACTTCACACAAAATGTATTTGTTGAGTCCAAACCTGGAGGTTTTGAGATGCTTTGGAATGGAGTACAATGCTGAAGAGGTTTCACAAGCCATACTGAACGTACTTCAGAAAACTCCTCAATAA MLTFRSIFSTSKHHSRQAPSVFQRLHPSISVLSCKCSTSSKYSKERPEVPLLSADGHTSSSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTCENIVKGPVIGGPFSLIDTEKRNVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESRHKFKVLPIFVTIDPQRDNPSHLRAYLKEFDSRIIGLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPNLEVLRCFGMEYNAEEVSQAILNVLQKTPQ Homology
BLAST of Cucsat.G2300 vs. ExPASy Swiss-Prot
Match: Q8LAL0 (Protein SCO1 homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC2 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30 Identity = 77/169 (45.56%), Postives = 100/169 (59.17%), Query Frame = 0
BLAST of Cucsat.G2300 vs. ExPASy Swiss-Prot
Match: O42899 (Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sco1 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.8e-13 Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 0
BLAST of Cucsat.G2300 vs. ExPASy Swiss-Prot
Match: Q8VYP0 (Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC1 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.9e-12 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of Cucsat.G2300 vs. ExPASy Swiss-Prot
Match: O75880 (Protein SCO1 homolog, mitochondrial OS=Homo sapiens OX=9606 GN=SCO1 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10 Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of Cucsat.G2300 vs. ExPASy Swiss-Prot
Match: A1A4J8 (Protein SCO1 homolog, mitochondrial OS=Bos taurus OX=9913 GN=SCO1 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 5.0e-10 Identity = 32/96 (33.33%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Cucsat.G2300 vs. NCBI nr
Match: XP_004143472.1 (protein SCO1 homolog 2, mitochondrial [Cucumis sativus] >KGN48759.1 hypothetical protein Csa_003251 [Cucumis sativus]) HSP 1 Score: 319 bits (818), Expect = 3.11e-108 Identity = 159/161 (98.76%), Postives = 159/161 (98.76%), Query Frame = 0
BLAST of Cucsat.G2300 vs. NCBI nr
Match: XP_008440607.1 (PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis melo]) HSP 1 Score: 298 bits (763), Expect = 7.53e-100 Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = 0
BLAST of Cucsat.G2300 vs. NCBI nr
Match: XP_038881278.1 (protein SCO1 homolog 2, mitochondrial [Benincasa hispida]) HSP 1 Score: 258 bits (659), Expect = 4.28e-84 Identity = 135/162 (83.33%), Postives = 142/162 (87.65%), Query Frame = 0
BLAST of Cucsat.G2300 vs. NCBI nr
Match: KAG6604025.1 (Protein SCO1-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034189.1 Protein SCO1-like 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 255 bits (651), Expect = 8.00e-83 Identity = 131/162 (80.86%), Postives = 142/162 (87.65%), Query Frame = 0
BLAST of Cucsat.G2300 vs. NCBI nr
Match: XP_022949607.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita moschata]) HSP 1 Score: 255 bits (651), Expect = 8.00e-83 Identity = 131/162 (80.86%), Postives = 142/162 (87.65%), Query Frame = 0
BLAST of Cucsat.G2300 vs. ExPASy TrEMBL
Match: A0A0A0KIW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500510 PE=3 SV=1) HSP 1 Score: 319 bits (818), Expect = 1.50e-108 Identity = 159/161 (98.76%), Postives = 159/161 (98.76%), Query Frame = 0
BLAST of Cucsat.G2300 vs. ExPASy TrEMBL
Match: A0A1S3B131 (protein SCO1 homolog 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484980 PE=3 SV=1) HSP 1 Score: 298 bits (763), Expect = 3.65e-100 Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = 0
BLAST of Cucsat.G2300 vs. ExPASy TrEMBL
Match: A0A6J1GCL0 (protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452949 PE=3 SV=1) HSP 1 Score: 255 bits (651), Expect = 3.87e-83 Identity = 131/162 (80.86%), Postives = 142/162 (87.65%), Query Frame = 0
BLAST of Cucsat.G2300 vs. ExPASy TrEMBL
Match: A0A6J1ITF2 (protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478493 PE=3 SV=1) HSP 1 Score: 252 bits (643), Expect = 6.35e-82 Identity = 130/162 (80.25%), Postives = 141/162 (87.04%), Query Frame = 0
BLAST of Cucsat.G2300 vs. ExPASy TrEMBL
Match: A0A6J1BW99 (protein SCO1 homolog 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005302 PE=3 SV=1) HSP 1 Score: 224 bits (570), Expect = 7.85e-71 Identity = 118/163 (72.39%), Postives = 132/163 (80.98%), Query Frame = 0
BLAST of Cucsat.G2300 vs. TAIR 10
Match: AT4G39740.1 (Thioredoxin superfamily protein ) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31 Identity = 77/169 (45.56%), Postives = 100/169 (59.17%), Query Frame = 0
BLAST of Cucsat.G2300 vs. TAIR 10
Match: AT3G08950.1 (electron transport SCO1/SenC family protein ) HSP 1 Score: 72.0 bits (175), Expect = 4.9e-13 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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