Cucsat.G18053.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G18053.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	DUF641 domain-containing protein
Location	ctg3345: 4538889 .. 4540130 (+)
RNA-Seq Expression	Cucsat.G18053.T5
Synteny	Cucsat.G18053.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTGATCGGAAGGACTCTGAGGTAATGGCTCTTAGAAAAAAGTTGGGGGAGTTGCAGAAGTCTAATTTGAGATTATCAAAGAAATTATCTGCTAGTTTGAATGCCCCTTGTGATGTTTTGTTGTCTGTTAGAGTATTCGATTCAATATTACACGATGCTTGTAGAGCAGCCTACAATTTTAGTAAAGTTTTGATGGAATTGATGAAGAAAGCTTCGTGGGATATGGATTTAGCTGCTAATTCAGTTCATTGTGAGATCAGATATGCGAAGAAAGCGCATATTCGGTATGCATTCTTATCATATGTTTGTTTATGGATGTTTAGAAGTTTTGATTCGGAAGTTTATGGTGTGACTGAGACTGAGAGTTTTTGTACTGAACAATCTCAGAATTTTGATGGAATTAGCATTTCTCTTAAGCAATTACTTGAGCATGTTTCAAGCAACCCAATGGAACTGTTAAGTGTAAATCCTCAATGTGCATTTGCAAAATTTTGTGAGAAGAAATATCAAGAACTTATTCATCCTACTATGGAGTCGTCAATTTTCAGTAATTTGGATAGGAAAGAAGCCATTTTGAATTCATGGCGGTCGGTCAGTGTGTTCTATAAGTCGTTTGTTAAAATGGCTAGCTCAGTGTGGATGTTGCATAAGTTGGCTTTCTCTTTCGATCCCATTGTGGAAATTTTTCAAGTTGAAAGAGGTGCTGAGTTCTCAATGGTATTCATGGAAGACGTCACGAGAAGATACATTCCACCTTTTAAATCTCGGGCAAAAGTAGGGTTTACTGTGGTTCCTGGTTTTAAAATTGGAAAGACAGTAATCCAGTCTCAGGTCTATCTTGAGGAACTCTGTGCTCTTGGTAAAGGATGAAAAACAAAAGCTTCCATTGAGATTTATAACGAGGAAAATGACTCCTCCTTTTCGTGTTATCATTCCGATATCTATGGTGAGTTGGAATTCATGAGGTGAGTGGATGCCTCATTAACTTGCTGAAGCTAGATAAATGAATGGACTGTGCACCACCTGAACGCTAGCTCATCGCTTCTGGACACGGATAAACTGCAAACTCAGCAGCCACCTTGTAAATCTCTCCCTCGTGCTCTCTTTCACTTACTGTGAGTATTGTTCAGGGTCAATTTTATAGATATTTTTTCTCCTTTTGAGTTCATCACTCACTGATATATACATAACCAAATTGTGTATTTAGATCAACTGATTACAGTCATCATATAATTAATGAT

Coding sequence (CDS)

TTGATCGGAAGGACTCTGAGAGTATTCGATTCAATATTACACGATGCTTGTAGAGCAGCCTACAATTTTAGTAAAGTTTTGATGGAATTGATGAAGAAAGCTTCGTGGGATATGGATTTAGCTGCTAATTCAGTTCATTGTGAGATCAGATATGCGAAGAAAGCGCATATTCGGTATGCATTCTTATCATATGTTTGTTTATGGATGTTTAGAAGTTTTGATTCGGAAGTTTATGGTGTGACTGAGACTGAGAGTTTTTGTACTGAACAATCTCAGAATTTTGATGGAATTAGCATTTCTCTTAAGCAATTACTTGAGCATGTTTCAAGCAACCCAATGGAACTGTTAAGTGTAAATCCTCAATGTGCATTTGCAAAATTTTGTGAGAAGAAATATCAAGAACTTATTCATCCTACTATGGAGTCGTCAATTTTCAGTAATTTGGATAGGAAAGAAGCCATTTTGAATTCATGGCGGTCGGTCAGTGTGTTCTATAAGTCGTTTGTTAAAATGGCTAGCTCAGTGTGGATGTTGCATAAGTTGGCTTTCTCTTTCGATCCCATTGTGGAAATTTTTCAAGTTGAAAGAGGTGCTGAGTTCTCAATGGTATTCATGGAAGACGTCACGAGAAGATACATTCCACCTTTTAAATCTCGGGCAAAAGTAGGGTTTACTGTGGTTCCTGGTTTTAAAATTGGAAAGACAGTAATCCAGTCTCAGGTCTATCTTGAGGAACTCTGTGCTCTTGGTAAAGGATGA

Protein sequence

LIGRTLRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAFAKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFSFDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLEELCALGKG

Homology

[Close]

BLAST of Cucsat.G18053.T5 vs. ExPASy Swiss-Prot
Match: F4KGE8 (Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana OX=3702 GN=GIL1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.9e-31
Identity = 84/256 (32.81%), Postives = 128/256 (50.00%), Query Frame = 0


Query: 8   VFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYA--------------- 67
           +F+  +     A+ +F+ +L+ LM+ A WD+  A  S+      +               
Sbjct: 303 LFEMTMIQVKEASKSFTGILLSLMRAAHWDIAAAVRSIEAASASSDGMSASSFASSVQSS 362

Query: 68  -KKAHIRYAFLSYVCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSN 127
               H ++A  SY+C  +F+ FD E + +  + S      Q         K +    + +
Sbjct: 363 VPNQHAKFALESYICRKIFQGFDHETFYMDGSLSSLINPDQYRRDCFAQFKDM---KAMD 422

Query: 128 PMELLSVNPQCAFAKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKM 187
           PMELL + P C F KFC KKY  +IH  ME S+F + +++E ++      S FY  F+ +
Sbjct: 423 PMELLGILPTCHFGKFCSKKYLSIIHQKMEESLFGDSEQRELVVAGNHPRSQFYGEFLGL 482

Query: 188 ASSVWMLHKLAFSFDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFK 244
           A +VW+LH LAFS DP    F+  RGAEF   +ME V R       +   VGF V PGFK
Sbjct: 483 AKAVWLLHLLAFSLDPSPSHFEANRGAEFHSQYMESVVRFSDGRVPAGQVVGFPVCPGFK 542

[Close]

BLAST of Cucsat.G18053.T5 vs. ExPASy Swiss-Prot
Match: Q9LXU9 (IRK-interacting protein OS=Arabidopsis thaliana OX=3702 GN=IRKI PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.8e-06
Identity = 39/121 (32.23%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 124 FAKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVS-VFYKSFVKMASSVWMLHKLA 183
           F++FC++K   +I                  LN  R  S    ++F   A  VW+LH LA
Sbjct: 450 FSRFCDEKMSLII----------------TTLNWTRPWSEQMLQAFFVAAKCVWLLHLLA 509

Query: 184 FSFDPIVEIFQVERGAEFSMVFMEDV--TRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQ 242
           FSF+P + I +VE   EF   FMED+   R+     +  A+V   V+PGF +   V++ +
Sbjct: 510 FSFNPALGILRVEENREFESSFMEDMGADRQRSALSRGPARVKVMVMPGFYVLDRVLRCK 554

[Close]

BLAST of Cucsat.G18053.T5 vs. NCBI nr
Match: XP_031743297.1 (protein GRAVITROPIC IN THE LIGHT 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 495 bits (1274), Expect = 3.48e-173
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 5   TLRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 64
           ++RVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY
Sbjct: 211 SVRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 270

Query: 65  VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 124
           VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF
Sbjct: 271 VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 330

Query: 125 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 184
           AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS
Sbjct: 331 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 390

Query: 185 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 244
           FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE
Sbjct: 391 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 450

Query: 245 ELCALGKG 252
           ELCALGKG
Sbjct: 451 ELCALGKG 458

[Close]

BLAST of Cucsat.G18053.T5 vs. NCBI nr
Match: XP_004140484.1 (protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Cucumis sativus] >KGN46576.1 hypothetical protein Csa_004810 [Cucumis sativus])

HSP 1 Score: 495 bits (1274), Expect = 1.20e-172
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 5   TLRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 64
           ++RVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY
Sbjct: 247 SVRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 306

Query: 65  VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 124
           VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF
Sbjct: 307 VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 366

Query: 125 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 184
           AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS
Sbjct: 367 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 426

Query: 185 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 244
           FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE
Sbjct: 427 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 486

Query: 245 ELCALGKG 252
           ELCALGKG
Sbjct: 487 ELCALGKG 494

[Close]

BLAST of Cucsat.G18053.T5 vs. NCBI nr
Match: XP_008458139.1 (PREDICTED: IRK-interacting protein [Cucumis melo] >TYK14009.1 IRK-interacting protein [Cucumis melo var. makuwa])

HSP 1 Score: 482 bits (1241), Expect = 1.24e-167
Identity = 239/245 (97.55%), Postives = 243/245 (99.18%), Query Frame = 0


Query: 8   VFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCL 67
           VFDSILHDACRAAYNF+KVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCL
Sbjct: 250 VFDSILHDACRAAYNFTKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCL 309

Query: 68  WMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAFAKF 127
           WMFRSFDSEV+GV ETESFCTEQSQN DGISISLKQLLEHVSSNPMELLSVNPQCAFAKF
Sbjct: 310 WMFRSFDSEVFGVIETESFCTEQSQNLDGISISLKQLLEHVSSNPMELLSVNPQCAFAKF 369

Query: 128 CEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFSFDP 187
           CEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVW+LHKLAFSFDP
Sbjct: 370 CEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWILHKLAFSFDP 429

Query: 188 IVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLEELC 247
           IVEIFQVERGAEFSMVFMEDVTRRYIPPFK+RAKVGFTVVPGFKIGKTVIQSQVYLEELC
Sbjct: 430 IVEIFQVERGAEFSMVFMEDVTRRYIPPFKARAKVGFTVVPGFKIGKTVIQSQVYLEELC 489

Query: 248 ALGKG 252
           ALGKG
Sbjct: 490 ALGKG 494

[Close]

BLAST of Cucsat.G18053.T5 vs. NCBI nr
Match: XP_038876283.1 (protein GRAVITROPIC IN THE LIGHT 1 [Benincasa hispida])

HSP 1 Score: 466 bits (1198), Expect = 5.86e-161
Identity = 232/248 (93.55%), Postives = 241/248 (97.18%), Query Frame = 0


Query: 5   TLRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 64
           ++RVFDSILHDACRAAYNF+KVLMELMKKASWDMDLAANSVH EIR+AKKAH RYAFLSY
Sbjct: 257 SVRVFDSILHDACRAAYNFTKVLMELMKKASWDMDLAANSVHSEIRFAKKAHSRYAFLSY 316

Query: 65  VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 124
           VCLWMFRSFDSEV+GV ETES CTEQSQ+ D IS+SLKQLLEHVSSNPMELLSVNPQCAF
Sbjct: 317 VCLWMFRSFDSEVFGVVETESLCTEQSQSSDRISMSLKQLLEHVSSNPMELLSVNPQCAF 376

Query: 125 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 184
           +KFCEKKYQELIHP+MESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS
Sbjct: 377 SKFCEKKYQELIHPSMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 436

Query: 185 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 244
           FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE
Sbjct: 437 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 496

Query: 245 ELCALGKG 252
           ELCA GKG
Sbjct: 497 ELCAPGKG 504

[Close]

BLAST of Cucsat.G18053.T5 vs. NCBI nr
Match: XP_023514503.1 (protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442 bits (1138), Expect = 9.40e-152
Identity = 223/248 (89.92%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 5   TLRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 64
           ++RVFDSILHDACRA YNF+KVLMELMKKASWDMDLAANSVH EI YAKKAH RYAFLSY
Sbjct: 266 SVRVFDSILHDACRATYNFTKVLMELMKKASWDMDLAANSVHREIGYAKKAHNRYAFLSY 325

Query: 65  VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 124
           VCL MFRSFDSE++GV ETESFC EQSQN D  SISLKQLLEHVSSNPMELLSVNPQCAF
Sbjct: 326 VCLGMFRSFDSEIFGVGETESFCNEQSQNLDRNSISLKQLLEHVSSNPMELLSVNPQCAF 385

Query: 125 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 184
           +KFCE+KYQELIHPTMESSIFSNLDRKE IL SWRSVSVFYKSF+KMASSVWMLHKLAFS
Sbjct: 386 SKFCERKYQELIHPTMESSIFSNLDRKEDILKSWRSVSVFYKSFIKMASSVWMLHKLAFS 445

Query: 185 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 244
           FDPIVE+FQVERGAEFSMV+MEDVTRRYIPPFKSRAKVGFTVVPGFKIG+TVIQSQVYLE
Sbjct: 446 FDPIVEVFQVERGAEFSMVYMEDVTRRYIPPFKSRAKVGFTVVPGFKIGRTVIQSQVYLE 505

Query: 245 ELCALGKG 252
           E  ALGKG
Sbjct: 506 E--ALGKG 511

[Close]

BLAST of Cucsat.G18053.T5 vs. ExPASy TrEMBL
Match: A0A0A0KFR3 (DUF641 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109710 PE=4 SV=1)

HSP 1 Score: 495 bits (1274), Expect = 5.81e-173
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 5   TLRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 64
           ++RVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY
Sbjct: 247 SVRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 306

Query: 65  VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 124
           VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF
Sbjct: 307 VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 366

Query: 125 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 184
           AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS
Sbjct: 367 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 426

Query: 185 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 244
           FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE
Sbjct: 427 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 486

Query: 245 ELCALGKG 252
           ELCALGKG
Sbjct: 487 ELCALGKG 494

[Close]

BLAST of Cucsat.G18053.T5 vs. ExPASy TrEMBL
Match: A0A5D3CUU8 (IRK-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00060 PE=4 SV=1)

HSP 1 Score: 482 bits (1241), Expect = 5.99e-168
Identity = 239/245 (97.55%), Postives = 243/245 (99.18%), Query Frame = 0


Query: 8   VFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCL 67
           VFDSILHDACRAAYNF+KVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCL
Sbjct: 250 VFDSILHDACRAAYNFTKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCL 309

Query: 68  WMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAFAKF 127
           WMFRSFDSEV+GV ETESFCTEQSQN DGISISLKQLLEHVSSNPMELLSVNPQCAFAKF
Sbjct: 310 WMFRSFDSEVFGVIETESFCTEQSQNLDGISISLKQLLEHVSSNPMELLSVNPQCAFAKF 369

Query: 128 CEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFSFDP 187
           CEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVW+LHKLAFSFDP
Sbjct: 370 CEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWILHKLAFSFDP 429

Query: 188 IVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLEELC 247
           IVEIFQVERGAEFSMVFMEDVTRRYIPPFK+RAKVGFTVVPGFKIGKTVIQSQVYLEELC
Sbjct: 430 IVEIFQVERGAEFSMVFMEDVTRRYIPPFKARAKVGFTVVPGFKIGKTVIQSQVYLEELC 489

Query: 248 ALGKG 252
           ALGKG
Sbjct: 490 ALGKG 494

[Close]

BLAST of Cucsat.G18053.T5 vs. ExPASy TrEMBL
Match: A0A1S3C6P3 (IRK-interacting protein OS=Cucumis melo OX=3656 GN=LOC103497664 PE=4 SV=1)

HSP 1 Score: 482 bits (1241), Expect = 5.99e-168
Identity = 239/245 (97.55%), Postives = 243/245 (99.18%), Query Frame = 0


Query: 8   VFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCL 67
           VFDSILHDACRAAYNF+KVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCL
Sbjct: 250 VFDSILHDACRAAYNFTKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSYVCL 309

Query: 68  WMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAFAKF 127
           WMFRSFDSEV+GV ETESFCTEQSQN DGISISLKQLLEHVSSNPMELLSVNPQCAFAKF
Sbjct: 310 WMFRSFDSEVFGVIETESFCTEQSQNLDGISISLKQLLEHVSSNPMELLSVNPQCAFAKF 369

Query: 128 CEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFSFDP 187
           CEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVW+LHKLAFSFDP
Sbjct: 370 CEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWILHKLAFSFDP 429

Query: 188 IVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLEELC 247
           IVEIFQVERGAEFSMVFMEDVTRRYIPPFK+RAKVGFTVVPGFKIGKTVIQSQVYLEELC
Sbjct: 430 IVEIFQVERGAEFSMVFMEDVTRRYIPPFKARAKVGFTVVPGFKIGKTVIQSQVYLEELC 489

Query: 248 ALGKG 252
           ALGKG
Sbjct: 490 ALGKG 494

[Close]

BLAST of Cucsat.G18053.T5 vs. ExPASy TrEMBL
Match: A0A6J1HI83 (protein GRAVITROPIC IN THE LIGHT 1 OS=Cucurbita moschata OX=3662 GN=LOC111464566 PE=4 SV=1)

HSP 1 Score: 441 bits (1134), Expect = 1.84e-151
Identity = 221/248 (89.11%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 5   TLRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 64
           ++RVFDSILHDACRA YNF+KVLMELMKKASWDMDLAANSVH EI YAKKAH RYAFLSY
Sbjct: 266 SVRVFDSILHDACRATYNFTKVLMELMKKASWDMDLAANSVHREIGYAKKAHNRYAFLSY 325

Query: 65  VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 124
           VCL MFRSFDSE++GV ETESFC EQSQN D  SISLKQLLEHVSSNPMELLSVNPQCAF
Sbjct: 326 VCLGMFRSFDSEIFGVGETESFCNEQSQNLDRNSISLKQLLEHVSSNPMELLSVNPQCAF 385

Query: 125 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 184
           +KFCE+KYQELIHPTMESSIFSNLDRKE IL SWRSVSVFYKSF+KMASSVWMLHKLAFS
Sbjct: 386 SKFCERKYQELIHPTMESSIFSNLDRKEDILKSWRSVSVFYKSFIKMASSVWMLHKLAFS 445

Query: 185 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 244
           FDP+VE+FQVE+GAEFSMV+MEDVTRRYIPPFKSRAKVGFTVVPGFKIG+TVIQSQVYLE
Sbjct: 446 FDPVVEVFQVEKGAEFSMVYMEDVTRRYIPPFKSRAKVGFTVVPGFKIGRTVIQSQVYLE 505

Query: 245 ELCALGKG 252
           E  ALGKG
Sbjct: 506 E--ALGKG 511

[Close]

BLAST of Cucsat.G18053.T5 vs. ExPASy TrEMBL
Match: A0A6J1KCL3 (protein GRAVITROPIC IN THE LIGHT 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494391 PE=4 SV=1)

HSP 1 Score: 441 bits (1133), Expect = 2.61e-151
Identity = 222/248 (89.52%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 5   TLRVFDSILHDACRAAYNFSKVLMELMKKASWDMDLAANSVHCEIRYAKKAHIRYAFLSY 64
           ++RVFDSILHDACRA YNF+KVLMELMKKASWDMDLAANSVH EI Y KKAH RYAFLSY
Sbjct: 266 SVRVFDSILHDACRATYNFTKVLMELMKKASWDMDLAANSVHREIGYVKKAHNRYAFLSY 325

Query: 65  VCLWMFRSFDSEVYGVTETESFCTEQSQNFDGISISLKQLLEHVSSNPMELLSVNPQCAF 124
           VCL MFRSFDSE++GV ETESFC EQSQN D  SISLKQLLEHVSSNPMELLSVNPQCAF
Sbjct: 326 VCLGMFRSFDSEIFGVGETESFCKEQSQNLDRNSISLKQLLEHVSSNPMELLSVNPQCAF 385

Query: 125 AKFCEKKYQELIHPTMESSIFSNLDRKEAILNSWRSVSVFYKSFVKMASSVWMLHKLAFS 184
           +KFCE+KYQELIHPTMESSIFSNLDRKE IL SWRSVSVFYKSF+KMASSVWMLHKLAFS
Sbjct: 386 SKFCERKYQELIHPTMESSIFSNLDRKEDILKSWRSVSVFYKSFIKMASSVWMLHKLAFS 445

Query: 185 FDPIVEIFQVERGAEFSMVFMEDVTRRYIPPFKSRAKVGFTVVPGFKIGKTVIQSQVYLE 244
           FDPIVE+FQVERGAEFSMV+MEDVTRRYIPPFKSRAKVGFTVVPGFKIG+TVIQSQVYLE
Sbjct: 446 FDPIVEVFQVERGAEFSMVYMEDVTRRYIPPFKSRAKVGFTVVPGFKIGRTVIQSQVYLE 505

Query: 245 ELCALGKG 252
           E  ALGKG
Sbjct: 506 E--ALGKG 511

The following BLAST results are available for this feature:

BLAST of Cucsat.G18053.T5 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KGE8	7.9e-31	32.81	Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana OX=3702 GN=GIL1 PE=1 ...	[more]
Q9LXU9	8.8e-06	32.23	IRK-interacting protein OS=Arabidopsis thaliana OX=3702 GN=IRKI PE=1 SV=1	[more]

BLAST of Cucsat.G18053.T5 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743297.1	3.48e-173	99.19	protein GRAVITROPIC IN THE LIGHT 1 isoform X2 [Cucumis sativus]	[more]
XP_004140484.1	1.20e-172	99.19	protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Cucumis sativus] >KGN46576.1 hypo...	[more]
XP_008458139.1	1.24e-167	97.55	PREDICTED: IRK-interacting protein [Cucumis melo] >TYK14009.1 IRK-interacting pr...	[more]
XP_038876283.1	5.86e-161	93.55	protein GRAVITROPIC IN THE LIGHT 1 [Benincasa hispida]	[more]
XP_023514503.1	9.40e-152	89.92	protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G18053.T5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFR3	5.81e-173	99.19	DUF641 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109710 PE=4...	[more]
A0A5D3CUU8	5.99e-168	97.55	IRK-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C6P3	5.99e-168	97.55	IRK-interacting protein OS=Cucumis melo OX=3656 GN=LOC103497664 PE=4 SV=1	[more]
A0A6J1HI83	1.84e-151	89.11	protein GRAVITROPIC IN THE LIGHT 1 OS=Cucurbita moschata OX=3662 GN=LOC111464566...	[more]
A0A6J1KCL3	2.61e-151	89.52	protein GRAVITROPIC IN THE LIGHT 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040225	Protein gravitropic in the light 1-like	PANTHER	PTHR31161	PROTEIN GRAVITROPIC IN THE LIGHT 1	coord: 5..247
None	No IPR available	PANTHER	PTHR31161:SF3	EXPRESSED PROTEIN	coord: 5..247

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G18053	Cucsat.G18053	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18053.T5.E1	Cucsat.G18053.T5.E1	exon
Cucsat.G18053.T5.E2	Cucsat.G18053.T5.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18053.T5.C1	Cucsat.G18053.T5.C1	CDS
Cucsat.G18053.T5.C2	Cucsat.G18053.T5.C2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18053.T5	Cucsat.G18053.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009959	negative gravitropism
biological_process	GO:0009639	response to red or far red light