Cucsat.G7721.T8 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G7721.T8
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	60S ribosomal protein L30-like
Location	ctg1546: 578148 .. 579494 (+)
RNA-Seq Expression	Cucsat.G7721.T8
Synteny	Cucsat.G7721.T8

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCCCTTGTCGTGAAAAAAGCTAGAAGGTATGGATTGAAACCCTAATTTGAAACCCATAAAATTTGAAGTACTTCCATATTTCATCTTTTCTTTATCAGTTTCATCTTTCTTTAGGTATTCCTACACCTTTTGAGTAGCGACGATGGCGCCGGCGAAGAAGACCGTAAGTATCACTCTAATCTCGCACTTCCATTTAGTTTATGGATACTGGTTTTTGATGATTTTGATGATCTTTGGTGTTGTAATTTGCAGAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGTTTTCATCCGTTTCTTCTTTCAATTTAAGGTTTTATCCTGTATTTGTTTTTTTTTACACAGTTAAATATTTCGATCTGTGAAAATACAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAAGTTCTTTTTAAATAGTCTACTTCTACTTGGTAGATGGTTGTTTATTTTTTCCAAGTTGCAAGCTTTATAACATTTTGGAGCCTCATATGCATGATTTCTGGTTTATGGGACTTGGCTGCTCCTTTTTCTTTATAATGTTAGCACATCTTTCATAATTGTAGAATAAGAAAAACAACTCTTATACTTGACACAAATTAGAGTTAGCATCTTGGATAATCTGGGCAAGTATTTACTCTGTTTCTAATTGTATATTTGAGTAACTTGATAAATTAGGTAATGGCTGGGTATTCTGCTACGAATAGTGCTCATAATGGAGCTTTCTGTGTTCAAATAAACTAATAATTCAGTGTGTAGTTTGTTCAATTGTTCACACTATAATCTTTGTAGAACTATTTGCGAGGTAGGAGCTATTTGCATACCTGTGAAGGAAGGCACAAATAGACACAGGAATGTTAAAATTTAGGGCTCTAACACAGGAAAAACATTTTTATCAAGTGTCAGAGTGTCCAGATAAGAAGGAGGTTATGGCTAAAAAAATATGCTTAGTTTTGTACTTTCCTACTGATTTGCTACCATTATCTTTCAACAGTTGTTTTGATCTTGGTATGAAGCCTATTGAATTAAACAAGTGGGTTTCTATCATTGGTAGTAATTGGCTTGCTTCTTGCTCATAATATTTATGTTGGTCAATCAATTTAATTTGAACTCGTTCCATTTATACGTGTTTAGTTTAAATCTTACTCAGTTAATTAGACATGTATTGTCAATTGTTCTGCTTTACTTCTATGTAT

Coding sequence (CDS)

ATGGCGCCGGCGAAGAAGACCAAGAAGACTCACGAGAGCATTAACAACAGGCTGGCCCTTGTCATGAAGAGCGGCAAGTACACACTCGGTTACAAAACCGTTCTTCGTACTATCAGAGGTTCCAAAGGGAAGCTTATTATTCTATCGAACAACTGCCCACCTCTGCGTAAATCCGAGATTGAGTACTACGCAATGCTTGCCAAAATAGGAGTTCACCACTACAACGGAAGTAAGTTCTTTTTAAATAGTCTACTTCTACTTGGTAGATGGTTGTTTATTTTTTCCAAGTTGCAAGCTTTATAA

Protein sequence

MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEIEYYAMLAKIGVHHYNGSKFFLNSLLLLGRWLFIFSKLQAL

Homology

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-33
Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M  AKKTKKTHESINNRLALVMKSGKYTLGYKTVL+++R SKGKLII++NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGSKFFLNS 84
          EYYAMLAK+GVHHYNG+   L +
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 8.3e-32
Identity = 65/83 (78.31%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M  AKKTKKTHESIN+RLALVMKSGK+TLGYKTVL ++R +KGKLII++NNCPPLRKSEI
Sbjct: 1  MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGSKFFLNS 84
          EYYAMLAK+GVHHYNG+   L +
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-30
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M   KKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++RGSKGKLI++S NCPPLR+SEI
Sbjct: 1  MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61 EYYAMLAKIGVHHYNGSKFFLNS 84
          EYYAMLAK+GVHHYNG+   L +
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy Swiss-Prot
Match: Q9C8F7 (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-29
Identity = 60/75 (80.00%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M  AKKTKK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEI
Sbjct: 1  MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKIGVHHYN 76
          EYYAMLAK+GVHHYN
Sbjct: 61 EYYAMLAKVGVHHYN 75

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy Swiss-Prot
Match: Q9LSA3 (60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-28
Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          M   KK KK+HE IN+RLALVMKSGKYTLGYK+VL+++R SKGKLI++S+NCPPLR+SEI
Sbjct: 1  MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61 EYYAMLAKIGVHHYNGSKFFLNS 84
          EYYAMLAK+GVH YNG+   L +
Sbjct: 61 EYYAMLAKVGVHRYNGNNVDLGT 83

[Close]

BLAST of Cucsat.G7721.T8 vs. NCBI nr
Match: XP_004140311.1 (60S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa_008795 [Cucumis sativus])

HSP 1 Score: 155 bits (391), Expect = 1.46e-46
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]

BLAST of Cucsat.G7721.T8 vs. NCBI nr
Match: XP_008460497.1 (PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S ribosomal protein L30-like [Cucurbita moschata] >XP_022992865.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023549693.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_023549694.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >XP_038906736.1 60S ribosomal protein L30-like [Benincasa hispida] >KAA0062391.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa] >KAG6579016.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016539.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma] >TYK26589.1 60S ribosomal protein L30-like [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (385), Expect = 1.20e-45
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]

BLAST of Cucsat.G7721.T8 vs. NCBI nr
Match: XP_022952815.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7032743.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152 bits (384), Expect = 1.71e-45
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAK+GVHHYNGS
Sbjct: 61 EYYAMLAKVGVHHYNGS 77

[Close]

BLAST of Cucsat.G7721.T8 vs. NCBI nr
Match: XP_022990953.1 (60S ribosomal protein L30-like [Cucurbita maxima])

HSP 1 Score: 151 bits (382), Expect = 3.44e-45
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTV+RTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVIRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAK+GVHHYNGS
Sbjct: 61 EYYAMLAKVGVHHYNGS 77

[Close]

BLAST of Cucsat.G7721.T8 vs. NCBI nr
Match: KAG6602049.1 (60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152 bits (384), Expect = 4.75e-45
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1   MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
           MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 34  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 93

Query: 61  EYYAMLAKIGVHHYNGS 77
           EYYAMLAK+GVHHYNGS
Sbjct: 94  EYYAMLAKVGVHHYNGS 110

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy TrEMBL
Match: A0A0A0KQ98 (Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409620 PE=3 SV=1)

HSP 1 Score: 155 bits (391), Expect = 7.08e-47
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy TrEMBL
Match: A0A5D3DSZ7 (60S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002180 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 5.82e-46
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy TrEMBL
Match: A0A6J1JWW8 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 5.82e-46
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy TrEMBL
Match: A0A6J1FH91 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 5.82e-46
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

[Close]

BLAST of Cucsat.G7721.T8 vs. ExPASy TrEMBL
Match: A0A1S3CCQ4 (60S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 5.82e-46
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRGSKGKLIILSNNCPPLRKSEI 60
          MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIR SKGKLIILSNNCPPLRKSEI
Sbjct: 1  MAPAKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTIRSSKGKLIILSNNCPPLRKSEI 60

Query: 61 EYYAMLAKIGVHHYNGS 77
          EYYAMLAKIGVHHYNGS
Sbjct: 61 EYYAMLAKIGVHHYNGS 77

The following BLAST results are available for this feature:

BLAST of Cucsat.G7721.T8 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49884	2.0e-33	81.93	60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1	[more]
Q9M5M6	8.3e-32	78.31	60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1	[more]
Q8VZ19	1.2e-30	74.70	60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1	[more]
Q9C8F7	1.0e-29	80.00	Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A P...	[more]
Q9LSA3	1.5e-28	71.08	60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1	[more]

BLAST of Cucsat.G7721.T8 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140311.1	1.46e-46	100.00	60S ribosomal protein L30 [Cucumis sativus] >KGN51019.1 hypothetical protein Csa...	[more]
XP_008460497.1	1.20e-45	98.70	PREDICTED: 60S ribosomal protein L30-like [Cucumis melo] >XP_022939971.1 60S rib...	[more]
XP_022952815.1	1.71e-45	97.40	60S ribosomal protein L30-like [Cucurbita moschata] >XP_023525455.1 60S ribosoma...	[more]
XP_022990953.1	3.44e-45	96.10	60S ribosomal protein L30-like [Cucurbita maxima]	[more]
KAG6602049.1	4.75e-45	97.40	60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cucsat.G7721.T8 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ98	7.08e-47	100.00	Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G409...	[more]
A0A5D3DSZ7	5.82e-46	98.70	60S ribosomal protein L30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1JWW8	5.82e-46	98.70	60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111489070 PE=3 ...	[more]
A0A6J1FH91	5.82e-46	98.70	60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111445673 PE=...	[more]
A0A1S3CCQ4	5.82e-46	98.70	60S ribosomal protein L30-like OS=Cucumis melo OX=3656 GN=LOC103499296 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 3..86 e-value: 4.7E-34 score: 118.2
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 13..79
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 13..77 e-value: 1.6E-13 score: 50.2
IPR039109	Ribosomal protein L30/YlxQ	PANTHER	PTHR11449	RIBOSOMAL PROTEIN L30	coord: 1..81
None	No IPR available	PANTHER	PTHR11449:SF25	60S RIBOSOMAL PROTEIN L30-1-RELATED	coord: 1..81
IPR022991	Ribosomal protein L30e, conserved site	PROSITE	PS00709	RIBOSOMAL_L30E_1	coord: 24..48

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G7721	Cucsat.G7721	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7721.T8.E1	Cucsat.G7721.T8.E1	exon
Cucsat.G7721.T8.E2	Cucsat.G7721.T8.E2	exon
Cucsat.G7721.T8.E3	Cucsat.G7721.T8.E3	exon
Cucsat.G7721.T8.E4	Cucsat.G7721.T8.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7721.T8.C1	Cucsat.G7721.T8.C1	CDS
Cucsat.G7721.T8.C2	Cucsat.G7721.T8.C2	CDS
Cucsat.G7721.T8.C3	Cucsat.G7721.T8.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G7721.T8	Cucsat.G7721.T8-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome