Cucsat.G3446.T9 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G3446.T9
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	DNA replication complex GINS protein PSF1-like
Location	ctg1041: 7391334 .. 7392138 (+)
RNA-Seq Expression	Cucsat.G3446.T9
Synteny	Cucsat.G3446.T9

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTGCCAAATAAATGCCACTGTACATGAATACACAGGCATAATCGAGCTGAGATTATAAGAAGTTTGATGTGGAAGGTAGTAGGTTCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCCCGTCTTAAAGAATATATGTCAAAACTGGAGTTGGATTTGACTGTGGTAATTTCGAACACCAAACACCAAACTTTACAATAACACATCCTTTTTTACATTTGCAACTCAAATTCCTCAGACTGAAATTTCCAAGTTTATCATTGGCAGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGAGTGCTCGACGATATCGGTGAAGGAATCGTTTTGAGTGATGATAAAACAGCAAACTTTGCACTTCATTCCATACATTTTCTTAAAAGAACTGATGCTGAACAATACATCTCACGGGTGGGAATCTCTGTGAACTTTGGTAGTTCTTGGTATTGCTTGCTTAAATAAATGTGTACTAAACTTGTAATCTTTCGAAAACAGGGATTGATGGAGGAGCTTACAGGCTGACTGATCCACTGGAGTTAGAGTTTAGTTGGAGATGTTTGTTGTAAATTAAGAAGCAAATGAGATAAGAGGCGAAACAAAGGGTGATCCATCCCATTTCTGTAATTATACATAGAGATAATTGATTGTCAATCAAACTTATTTTAGTGGGTTCTTTTTTTCATTTAATTTTATTTGATAATATAAACTTTATGAACTATGGTCCTGTGGTTTGTTTGTAAACCATATTCATAATCAG

Coding sequence (CDS)

ATGTGGAAGGTAGTAGGTTCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCCCGTCTTAAAGAATATATGTCAAAACTGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGAGTGCTCGACGATATCGGTGAAGGAATCGTTTTGAGTGATGATAAAACAGCAAACTTTGCACTTCATTCCATACATTTTCTTAAAAGAACTGATGCTGAACAATACATCTCACGGGGATTGATGGAGGAGCTTACAGGCTGA

Protein sequence

MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG

Homology

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy Swiss-Prot
Match: Q54HR6 (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum OX=44689 GN=gins1 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-16
Identity = 41/101 (40.59%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 2   WKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLD 61
           W    S++P +++E+LS +E ++F ++   L EY SK+ LDLT+D  PPK+ YI+VRV+ 
Sbjct: 91  WSSGQSLLPDQLKERLSQNEIQFFSEYDKILTEYNSKVGLDLTIDPQPPKELYIEVRVIK 150

Query: 62  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           ++GE +VL+   T N  L++ HFLKR+D    +  G +E +
Sbjct: 151 ELGE-VVLNSGCTVNLNLNTTHFLKRSDITNLVKNGSLEHI 190

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy Swiss-Prot
Match: Q7ZT47 (DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-09
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 6   GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKL----ELDLTVDMVPPKDPYIQVRVLD 65
           GS++P  ++  +S  E ++F ++   L  YM  L     LD+T DM PPK  YI+VR L 
Sbjct: 95  GSVLPSALRFHMSTEEMDWFNQYKRSLATYMRSLGGEEGLDITQDMKPPKSLYIEVRCLR 154

Query: 66  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           D GE   + D  T     +S HFL R   EQ I +G++E +
Sbjct: 155 DYGE-FEIDDGTTILLKKNSQHFLPRWKCEQLIRQGVLEHV 194

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy Swiss-Prot
Match: A4IFH4 (DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.6e-09
Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 6   GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKL----ELDLTVDMVPPKDPYIQVRVLD 65
           GS++P  ++  +S  E ++F ++   L  YM  L     LD+T DM PPK  YI+VR L 
Sbjct: 95  GSVLPSALRFHMSAEEMDWFNRYKKSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLK 154

Query: 66  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           D GE   + D  +     +S HFL R   EQ I +G++E +
Sbjct: 155 DYGE-FEVEDGTSVLLKKNSQHFLPRWKCEQLIRQGILEHV 194

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy Swiss-Prot
Match: Q14691 (DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 6   GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKL----ELDLTVDMVPPKDPYIQVRVLD 65
           GS++P  ++  ++  E E+F  +   L  YM  L     LD+T DM PPK  YI+VR L 
Sbjct: 95  GSVLPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLK 154

Query: 66  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           D GE   + D  +     +S HFL R   EQ I +G++E +
Sbjct: 155 DYGE-FEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHI 194

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy Swiss-Prot
Match: Q9CZ15 (DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 6   GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKL----ELDLTVDMVPPKDPYIQVRVLD 65
           GS++P  ++  +S  E E+F  +   L  YM  L     LD+T D+ PPK  YI+VR L 
Sbjct: 95  GSVLPNSLRFHMSAEETEWFNHYKKSLATYMRSLGGDEGLDITQDVKPPKSLYIEVRCLK 154

Query: 66  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           D GE   + D  +     +S HFL R   EQ I +G++E +
Sbjct: 155 DYGE-FEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHV 194

[Close]

BLAST of Cucsat.G3446.T9 vs. NCBI nr
Match: XP_004135842.1 (probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1 hypothetical protein Csa_016815 [Cucumis sativus])

HSP 1 Score: 207 bits (528), Expect = 3.89e-66
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. NCBI nr
Match: XP_038897311.1 (probable DNA replication complex GINS protein PSF1 [Benincasa hispida])

HSP 1 Score: 202 bits (514), Expect = 5.25e-64
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSMIPPEIQEKLSNSEEEYFKKHSAR+KEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMIPPEIQEKLSNSEEEYFKKHSARVKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. NCBI nr
Match: XP_022964026.1 (probable DNA replication complex GINS protein PSF1 [Cucurbita moschata] >XP_023000395.1 probable DNA replication complex GINS protein PSF1 [Cucurbita maxima] >KAG6593434.1 DNA replication complex GINS protein PSF1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (513), Expect = 7.46e-64
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSM+PPEIQEKLSNSEEEYFKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. NCBI nr
Match: XP_023514648.1 (probable DNA replication complex GINS protein PSF1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202 bits (513), Expect = 7.46e-64
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSM+PPEIQEKLSNSEEEYFKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. NCBI nr
Match: XP_008461089.1 (PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461091.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461092.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461093.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >KAA0058768.1 putative DNA replication complex GINS protein PSF1 [Cucumis melo var. makuwa] >TYK10562.1 putative DNA replication complex GINS protein PSF1 [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (512), Expect = 1.06e-63
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK++GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKLLGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy TrEMBL
Match: A0A0A0K8U8 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 SV=1)

HSP 1 Score: 207 bits (528), Expect = 1.89e-66
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy TrEMBL
Match: A0A6J1KI79 (probable DNA replication complex GINS protein PSF1 OS=Cucurbita maxima OX=3661 GN=LOC111494653 PE=3 SV=1)

HSP 1 Score: 202 bits (513), Expect = 3.61e-64
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSM+PPEIQEKLSNSEEEYFKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy TrEMBL
Match: A0A6J1HHQ1 (probable DNA replication complex GINS protein PSF1 OS=Cucurbita moschata OX=3662 GN=LOC111464174 PE=3 SV=1)

HSP 1 Score: 202 bits (513), Expect = 3.61e-64
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSM+PPEIQEKLSNSEEEYFKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy TrEMBL
Match: A0A1S3CDY2 (probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LOC103499784 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 5.13e-64
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK++GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKLLGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. ExPASy TrEMBL
Match: A0A5A7UU94 (Putative DNA replication complex GINS protein PSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002160 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 5.13e-64
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK++GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKLLGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446.T9 vs. TAIR 10
Match: AT1G80190.1 (partner of SLD five 1 )

HSP 1 Score: 141.7 bits (356), Expect = 3.2e-34
Identity = 70/96 (72.92%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 9   IPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIV 68
           +P EIQEKL+  E+EYFK HS  LK YM K+ ++L VDMVPPKDPYI+VR+LDDI EGIV
Sbjct: 107 LPSEIQEKLTTLEKEYFKNHSVALKSYMGKVGIELNVDMVPPKDPYIKVRILDDIDEGIV 166

Query: 69  LSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 105
           LS DKT NFA HS+HFLKRTDAE YI+RG MEELTG
Sbjct: 167 LS-DKTTNFARHSMHFLKRTDAEPYIARGQMEELTG 201

The following BLAST results are available for this feature:

BLAST of Cucsat.G3446.T9 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54HR6	2.3e-16	40.59	Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum O...	[more]
Q7ZT47	2.1e-09	37.62	DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=...	[more]
A4IFH4	4.6e-09	36.63	DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV...	[more]
Q14691	1.0e-08	36.63	DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 ...	[more]
Q9CZ15	1.3e-08	36.63	DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1...	[more]

BLAST of Cucsat.G3446.T9 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135842.1	3.89e-66	100.00	probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1...	[more]
XP_038897311.1	5.25e-64	96.15	probable DNA replication complex GINS protein PSF1 [Benincasa hispida]	[more]
XP_022964026.1	7.46e-64	95.19	probable DNA replication complex GINS protein PSF1 [Cucurbita moschata] >XP_0230...	[more]
XP_023514648.1	7.46e-64	95.19	probable DNA replication complex GINS protein PSF1 [Cucurbita pepo subsp. pepo]	[more]
XP_008461089.1	1.06e-63	96.15	PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP...	[more]

BLAST of Cucsat.G3446.T9 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8U8	1.89e-66	100.00	Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 S...	[more]
A0A6J1KI79	3.61e-64	95.19	probable DNA replication complex GINS protein PSF1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1HHQ1	3.61e-64	95.19	probable DNA replication complex GINS protein PSF1 OS=Cucurbita moschata OX=3662...	[more]
A0A1S3CDY2	5.13e-64	96.15	probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7UU94	5.13e-64	96.15	Putative DNA replication complex GINS protein PSF1 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Cucsat.G3446.T9 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80190.1	3.2e-34	72.92	partner of SLD five 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.58.1030		coord: 1..39 e-value: 3.7E-6 score: 29.2
IPR005339	GINS complex, subunit Psf1	PANTHER	PTHR12914	PARTNER OF SLD5	coord: 2..100
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	158573	GINS helical bundle-like	coord: 4..51

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G3446	Cucsat.G3446	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3446.T9.E1	Cucsat.G3446.T9.E1	exon
Cucsat.G3446.T9.E2	Cucsat.G3446.T9.E2	exon
Cucsat.G3446.T9.E3	Cucsat.G3446.T9.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3446.T9.C1	Cucsat.G3446.T9.C1	CDS
Cucsat.G3446.T9.C2	Cucsat.G3446.T9.C2	CDS
Cucsat.G3446.T9.C3	Cucsat.G3446.T9.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3446.T9	Cucsat.G3446.T9-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:1902983	DNA strand elongation involved in mitotic DNA replication
cellular_component	GO:0000811	GINS complex