Cucsat.G3446 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3446
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	DNA replication complex GINS protein PSF1-like
Location	ctg1041: 7391334 .. 7392138 (+)
RNA-Seq Expression	Cucsat.G3446
Synteny	Cucsat.G3446

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGATTTCCCGCCACTTCGTCTCTTAAATTGATATTTACAGAAAGCAACGCGCCCGAATCCCTAATTGCAGAACTTCGTTCCTCCACTACTTCATGCTCTGAAGTTTTTCCATAGGTACTTTCAATTTGCAGTTTTAACCCTATTGATTCTTTTTCTCCACCATCTATCTCTGGTTTAGATTTCGTTTGCGTAATTTCTTTCCAGCAGGACTCGATCTTTGTGTATTTTGCATTGTAATAACGATTTGGAACGATCATTTTTCTTCAGGGAGGTGAAATTTGAATATGTATGGAAGAAAAGCATGCCAATTGGTGAAAGAGTTAGCAAGCGGCGAGAAAGGACAGCTAACACACTTCAATGTGAGTTTACTTGTTTCATTGTTGCTTATATGTATAAACTGAGGTTGTGACCATCTGTTGTTGTTCTTGAGTTGAAATTAATCAAAATTCTGGACAGGGAATCAAAAAATTTTAAGTTCATGAAATGGGTATTTGTGGATTGACTTTCTAAGTGCTTAAAAACGTTTTTTTTTTCAAGTCCAAATATATTTTGCTTGTTTTCACTACTGCAGGAGCATTGTCGACCTATTCATGTTTTCTTGCGTGTGTGTACAATGAACTGTACCATTTTTGTTCAGTTTTTAAATATTCTCTTTTATTGGAAGTACATGGCTTTAAAAGGAATTATGGTTGCCTCTGGTCACGGTAATTCGTCTGTCTCTCAAATCACCTTGTTCATTGTCCTTGTGTCAAGCGATACAATATGTTTTTCTTAGCCTCTTCTTTCCATCTATCTTTAGAAAATTTATATTATATCTAAAATTTTCCACCTTTGTTTTCCTGTTTTTTCAGAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAGTCCTTGATTAGGTTAAAGATTTTACATTTTTTATTCACATGTTTCACTAATTGATACGATATATAGTTTTGACTGTTAGTAGCAGGTTATCTTAATACTTGTTATTAAACTTTCCTTATCCTATGGACAAGTGTCCTTGGTTGAGGCTAACTATAAGACACGATCTTTATGGAATTTTGTCCTTTCAATAAGTTTATGGTTTGAGAAATCTTCATCTATTTCCCAATGAAATTCAATATGGCCGATCGCCAATATGATAATCTAAAACAGGAAAGTACAGGAAGAAGGATTAGATCTTCAGACAACTAAGAATGAAGACCATTTTGGCGCGCTCATTCATCACCTTGCATTAGTTCGCAACAAACGTTGCCTTATGGCTTATGTGTAAGTGTAACATTATGAGATAAATTTGAAGAACAGTGTTTTTCTTGGTTTGCTAAGTTTTAGTAAATTCCATAATTGTTTGCCAAATAAATGCCACTGTACATGAATACACAGGCATAATCGAGCTGAGATTATAAGAAGTTTGATGTGGAAGGTAGTAGGTTCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCCCGTCTTAAAGAATATATGTCAAAACTGGAGTTGGATTTGACTGTGGTAATTTCGAACACCAAACACCAAACTTTACAATAACACATCCTTTTTTACATTTGCAACTCAAATTCCTCAGACTGAAATTTCCAAGTTTATCATTGGCAGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGAGTGCTCGACGATATCGGTGAAGGAATCGTTTTGAGTGATGATAAAACAGCAAACTTTGCACTTCATTCCATACATTTTCTTAAAAGAACTGATGCTGAACAATACATCTCACGGGTGGGAATCTCTGTGAACTTTGGTAGTTCTTGGTATTGCTTGCTTAAATAAATGTGTACTAAACTTGTAATCTTTCGAAAACAGGGATTGATGGAGGAGCTTACAGGCTGACTGATCCACTGGAGTTAGAGTTTAGTTGGAGATGTTTGTTGTAAATTAAGAAGCAAATGAGATAAGAGGCGAAACAAAGGGTGATCCATCCCATTTCTGTAATTATACATAGAGATAATTGATTGTCAATCAAACTTATTTTAGTGGGTTCTTTTTTTCATTTAATTTTATTTGATAATATAAACTTTATGAACTATGGTCCTGTGGTTTGTTTGTAAACCATATTCATAATCAGTCAAATAAGAGACTTTTTTAGAAACTCTGATATTAATTTAGTTAATCAATTTATAAGATATTTTTGTACGTATGAATTCTTAA

Coding sequence (CDS)

ATGGCTTATGTGCATAATCGAGCTGAGATTATAAGAAGTTTGATGTGGAAGGTAGTAGGTTCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCCCGTCTTAAAGAATATATGTCAAAACTGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGAGTGCTCGACGATATCGGTGAAGGAATCGTTTTGAGTGATGATAAAACAGCAAACTTTGCACTTCATTCCATACATTTTCTTAAAAGAACTGATGCTGAACAATACATCTCACGGGGATTGATGGAGGAGCTTACAGGCTGA

Protein sequence

MAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG

Homology

[Close]

BLAST of Cucsat.G3446 vs. ExPASy Swiss-Prot
Match: Q54HR6 (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum OX=44689 GN=gins1 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-16
Identity = 41/101 (40.59%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 2   WKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLD 61
           W    S++P +++E+LS +E ++F ++   L EY SK+ LDLT+D  PPK+ YI+VRV+ 
Sbjct: 91  WSSGQSLLPDQLKERLSQNEIQFFSEYDKILTEYNSKVGLDLTIDPQPPKELYIEVRVIK 150

Query: 62  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           ++GE +VL+   T N  L++ HFLKR+D    +  G +E +
Sbjct: 151 ELGE-VVLNSGCTVNLNLNTTHFLKRSDITNLVKNGSLEHI 190

[Close]

BLAST of Cucsat.G3446 vs. ExPASy Swiss-Prot
Match: Q7ZT47 (DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-09
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 6   GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKL----ELDLTVDMVPPKDPYIQVRVLD 65
           GS++P  ++  +S  E ++F ++   L  YM  L     LD+T DM PPK  YI+VR L 
Sbjct: 95  GSVLPSALRFHMSTEEMDWFNQYKRSLATYMRSLGGEEGLDITQDMKPPKSLYIEVRCLR 154

Query: 66  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           D GE   + D  T     +S HFL R   EQ I +G++E +
Sbjct: 155 DYGE-FEIDDGTTILLKKNSQHFLPRWKCEQLIRQGVLEHV 194

[Close]

BLAST of Cucsat.G3446 vs. ExPASy Swiss-Prot
Match: A4IFH4 (DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.6e-09
Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 6   GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKL----ELDLTVDMVPPKDPYIQVRVLD 65
           GS++P  ++  +S  E ++F ++   L  YM  L     LD+T DM PPK  YI+VR L 
Sbjct: 95  GSVLPSALRFHMSAEEMDWFNRYKKSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLK 154

Query: 66  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           D GE   + D  +     +S HFL R   EQ I +G++E +
Sbjct: 155 DYGE-FEVEDGTSVLLKKNSQHFLPRWKCEQLIRQGILEHV 194

[Close]

BLAST of Cucsat.G3446 vs. ExPASy Swiss-Prot
Match: Q14691 (DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 6   GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKL----ELDLTVDMVPPKDPYIQVRVLD 65
           GS++P  ++  ++  E E+F  +   L  YM  L     LD+T DM PPK  YI+VR L 
Sbjct: 95  GSVLPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLK 154

Query: 66  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           D GE   + D  +     +S HFL R   EQ I +G++E +
Sbjct: 155 DYGE-FEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHI 194

[Close]

BLAST of Cucsat.G3446 vs. ExPASy Swiss-Prot
Match: Q9CZ15 (DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 6   GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKL----ELDLTVDMVPPKDPYIQVRVLD 65
           GS++P  ++  +S  E E+F  +   L  YM  L     LD+T D+ PPK  YI+VR L 
Sbjct: 95  GSVLPNSLRFHMSAEETEWFNHYKKSLATYMRSLGGDEGLDITQDVKPPKSLYIEVRCLK 154

Query: 66  DIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL 103
           D GE   + D  +     +S HFL R   EQ I +G++E +
Sbjct: 155 DYGE-FEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHV 194

[Close]

BLAST of Cucsat.G3446 vs. NCBI nr
Match: XP_004135842.1 (probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1 hypothetical protein Csa_016815 [Cucumis sativus])

HSP 1 Score: 207 bits (528), Expect = 3.89e-66
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 200

[Close]

BLAST of Cucsat.G3446 vs. NCBI nr
Match: XP_038897311.1 (probable DNA replication complex GINS protein PSF1 [Benincasa hispida])

HSP 1 Score: 202 bits (514), Expect = 5.25e-64
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSMIPPEIQEKLSNSEEEYFKKHSAR+KEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMIPPEIQEKLSNSEEEYFKKHSARVKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446 vs. NCBI nr
Match: XP_022964026.1 (probable DNA replication complex GINS protein PSF1 [Cucurbita moschata] >XP_023000395.1 probable DNA replication complex GINS protein PSF1 [Cucurbita maxima] >KAG6593434.1 DNA replication complex GINS protein PSF1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (513), Expect = 7.46e-64
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSM+PPEIQEKLSNSEEEYFKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446 vs. NCBI nr
Match: XP_023514648.1 (probable DNA replication complex GINS protein PSF1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202 bits (513), Expect = 7.46e-64
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSM+PPEIQEKLSNSEEEYFKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446 vs. NCBI nr
Match: XP_008461089.1 (PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461091.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461092.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP_008461093.1 PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >KAA0058768.1 putative DNA replication complex GINS protein PSF1 [Cucumis melo var. makuwa] >TYK10562.1 putative DNA replication complex GINS protein PSF1 [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (512), Expect = 1.06e-63
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK++GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKLLGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446 vs. ExPASy TrEMBL
Match: A0A0A0K8U8 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 SV=1)

HSP 1 Score: 207 bits (528), Expect = 1.89e-66
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 200

[Close]

BLAST of Cucsat.G3446 vs. ExPASy TrEMBL
Match: A0A6J1KI79 (probable DNA replication complex GINS protein PSF1 OS=Cucurbita maxima OX=3661 GN=LOC111494653 PE=3 SV=1)

HSP 1 Score: 202 bits (513), Expect = 3.61e-64
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSM+PPEIQEKLSNSEEEYFKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446 vs. ExPASy TrEMBL
Match: A0A6J1HHQ1 (probable DNA replication complex GINS protein PSF1 OS=Cucurbita moschata OX=3662 GN=LOC111464174 PE=3 SV=1)

HSP 1 Score: 202 bits (513), Expect = 3.61e-64
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK+VGSM+PPEIQEKLSNSEEEYFKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKIVGSMLPPEIQEKLSNSEEEYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446 vs. ExPASy TrEMBL
Match: A0A1S3CDY2 (probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LOC103499784 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 5.13e-64
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK++GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKLLGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446 vs. ExPASy TrEMBL
Match: A0A5A7UU94 (Putative DNA replication complex GINS protein PSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002160 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 5.13e-64
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 60
           +WK++GSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL
Sbjct: 97  IWKLLGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVL 156

Query: 61  DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 104
           DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEEL G
Sbjct: 157 DDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELRG 200

[Close]

BLAST of Cucsat.G3446 vs. TAIR 10
Match: AT1G80190.1 (partner of SLD five 1 )

HSP 1 Score: 141.7 bits (356), Expect = 3.2e-34
Identity = 70/96 (72.92%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 9   IPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIV 68
           +P EIQEKL+  E+EYFK HS  LK YM K+ ++L VDMVPPKDPYI+VR+LDDI EGIV
Sbjct: 107 LPSEIQEKLTTLEKEYFKNHSVALKSYMGKVGIELNVDMVPPKDPYIKVRILDDIDEGIV 166

Query: 69  LSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 105
           LS DKT NFA HS+HFLKRTDAE YI+RG MEELTG
Sbjct: 167 LS-DKTTNFARHSMHFLKRTDAEPYIARGQMEELTG 201

The following BLAST results are available for this feature:

BLAST of Cucsat.G3446 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54HR6	2.3e-16	40.59	Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum O...	[more]
Q7ZT47	2.1e-09	37.62	DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=...	[more]
A4IFH4	4.6e-09	36.63	DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV...	[more]
Q14691	1.0e-08	36.63	DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 ...	[more]
Q9CZ15	1.3e-08	36.63	DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1...	[more]

BLAST of Cucsat.G3446 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135842.1	3.89e-66	100.00	probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1...	[more]
XP_038897311.1	5.25e-64	96.15	probable DNA replication complex GINS protein PSF1 [Benincasa hispida]	[more]
XP_022964026.1	7.46e-64	95.19	probable DNA replication complex GINS protein PSF1 [Cucurbita moschata] >XP_0230...	[more]
XP_023514648.1	7.46e-64	95.19	probable DNA replication complex GINS protein PSF1 [Cucurbita pepo subsp. pepo]	[more]
XP_008461089.1	1.06e-63	96.15	PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo] >XP...	[more]

BLAST of Cucsat.G3446 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8U8	1.89e-66	100.00	Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 S...	[more]
A0A6J1KI79	3.61e-64	95.19	probable DNA replication complex GINS protein PSF1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1HHQ1	3.61e-64	95.19	probable DNA replication complex GINS protein PSF1 OS=Cucurbita moschata OX=3662...	[more]
A0A1S3CDY2	5.13e-64	96.15	probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7UU94	5.13e-64	96.15	Putative DNA replication complex GINS protein PSF1 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Cucsat.G3446 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80190.1	3.2e-34	72.92	partner of SLD five 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.58.1030		coord: 1..135 e-value: 1.9E-39 score: 136.8
IPR021151	GINS subunit, domain A	PFAM	PF05916	Sld5	coord: 48..117 e-value: 7.8E-7 score: 29.6
IPR005339	GINS complex, subunit Psf1	PANTHER	PTHR12914	PARTNER OF SLD5	coord: 1..196
IPR005339	GINS complex, subunit Psf1	CDD	cd11710	GINS_A_psf1	coord: 3..137 e-value: 2.94366E-47 score: 149.713
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	158573	GINS helical bundle-like	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3446.T1	Cucsat.G3446.T1	mRNA
Cucsat.G3446.T2	Cucsat.G3446.T2	mRNA
Cucsat.G3446.T4	Cucsat.G3446.T4	mRNA
Cucsat.G3446.T6	Cucsat.G3446.T6	mRNA
Cucsat.G3446.T3	Cucsat.G3446.T3	mRNA
Cucsat.G3446.T5	Cucsat.G3446.T5	mRNA
Cucsat.G3446.T9	Cucsat.G3446.T9	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902983	DNA strand elongation involved in mitotic DNA replication
biological_process	GO:0006260	DNA replication
cellular_component	GO:0000811	GINS complex