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Cucsat.G1939.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGTGTGAATTGAATGGAAAGTTAAAGAAATGTGGAAAGGTGAGTGATGGAGAAGAGATTGAGGTTTAGCCAAAACTCCAAAAGGGACCAAAGGTTTTTGCGTTCTTTCCCATAAAGCAAAGCAGGCAAAGGCTGATGATGAGAAGACTGCTCACACTCACACAAACAACAACAACAACAACTTCCTCTTCCACTCTTTTCATTTCAATTTCCAGACAAACCACAGTCACTGTGACCCAAAAATCGAGAGACTGGAAGAAGGAATCAGATGCCATTACTTACATACGTTAGTTTAACTGCCACACTCACAAGGGAATCCAATTTTATCTACTTCTTCTTCCTTTGATTCTCTTAGAAAAGTTTACTTGCCTTCTTCAAACTCCAAAGCTTTCAAGACACTCAGAAATGGCGCCATCCCATTATTGGGGGATGCCTTCTTAGATCTGGGTATCTTCTTATCCTCTTTCTAAACCTGTAATTTTATCTTTCTTTTACATGGGGTTTCTAGTTTAAGTTTTTCTATGCTTTGCAACTGTAACCCCAGCCCATGTTTCTTTGACTTACCCTGATTGTCTACCCTAGAACCCTAGTCACTAGTTCGATTCTTTCAGTCTACTGTTCTTCTTTTCTCTTTCGCTTGTTAGTTCGTTTGTAGCTTTTAACATTTCTCTGAAGGCGTTTGTAATTAGTTTCGGGTTTTGTATGTGATTACCGATTGGAACACGGATGAGGAGGGGGGTTTGTTTCTTTGTTTGAGTGATTGAAGCGTTGGTTACTTACCTTTGAAGGAAATAACTGATGAGGTTCAAATGTTTATTTTTTTTTTTCATTTTGGTGTTGCTTCTAAAGCATCTTAACGAAAACGAATTTGGACTTGTTTTAATGCTCAAGTAACCATTTCGCTGGCTTTAATTATTTTCAAGATTACATCGATTTGATTAGTTGGTTTTTTTTTTTGTGTGAACCAATCGGTGGTGAGAAGGCATCTCTTTCTTTGGCATATTTGTAATTATCATTAACCATTGGTCTTTTCAGATTCTAATCTATTTTCTTTGGTGAAGATAAGTGTGCTGGGGTGACATCTCTCTTGATGTCATGCCCTTTGCTCCATCATTGCTAAATTACTGTTGATTTTCTTGTATATTCTCCAGATACTCCATTTTTTACGTTGTGTTGGGTATAGGTTTGGTCAAGGAAGAATGCCCCTTCTGAAGATCAAATGATCCAAACATCTTTGAAACCCACGAAACCCAATTAAATTGCCAAGTTTTGAGGTTTTCTGTCATTAATCTTGGCAGAAAATATCCATATGTTAGCAAAATCATGAATCTCCATCATAACTCACTTTTATTCAGATTTTGAATTCATTAAGATGCTCTGTTGTTGAACTCTGTCTTCTTTACTTCATTTAGACTTGGTTATTGTTTACAGGTAAATGACATGTTTCAACAACAGAGTGCCCATAATTCAAGCTTTATTCAGAACAACTCATTAGTTTGTGATGGACCCCACAAATGGAAATAATGCTACCAGCAAAAGCCCAAATTTGGCCTCAAAGCAGAGACTGCGATGGACACATGATCTTCACGAACGATTTGTTAATGCAGTCGCACAACTTGGTGGTCCAGATCGTGAGTGAACTCACCTCTAGTAGCTTTGTAGTTTAGCATCTTCGTATATACGTATACTGTGCCTGAGGATGAAAATGTTGATGCCAAATTTAAATTATCGCGTTAGTTCTTTGTTGGCAAGTTGTACAACTTTTCCCTTCCAACTCACATGAGAAAATGAAAGTGTTAGGGTATTCTTGTGCATAATAAAATAAACAAAGATATGAAAAATTGACACCATAAATTGGATGCATCCTGTATATTATATGGGGAGTGGAGGAATAAAACATGATGGACTTAGTAAAAATTGAAGCTAGGGTAGACTATCTTGAACTTGTGTGCCAACAAAGGATGACGTTAGATGATAGAATATTAAATTTACCTTCACTCATCAGTCTAACCTCCTAAATCAATCGACGATTTAAGATGTCTTAAACCATATTTACGGGTGTAAGTTTCATCTTTTCATTAGGTGCTACACCCAAAGGCGTCCTCAGAGTAATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGGTATGTAATATTTCACATAATTAAGATTGATTTCTTATTCTTACTTAAGATGAGGTTTATGTTAGCATGCATAAAGTTTGTTTTCTAATTTGTCTTCTTGGATTCATCCAGAAATATAGGCTTGCAAAATACCTTCCCGACTCCTCGTCTGATGGTAGGTGAATCGAGTTCCAAATTGTTCCTTTTCCATCTTAATTCGCACAAAATTTTGCAGACAAAACCTCACTAGTGACATCCACCAAGTCATTCACCTGTTTGTTGTATTGTTGATGCAAGGGAAAAAGACCGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGCTCGTCGTAAGTCTAATCCCCATACACTTCTCATTTAGCTCTGCGTTATACTGGAAGTTAATGTAAATATAATGTAGAACGAGGCACCCTTCTTGCTCTTAATTGGCAACTGACTGTTTGATGGCAGTAACCCTAAACTTTTGACCATCTGATCACCAAGGACAAGAAAAATGAAATTTATTATATTTTTGCAGGGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTTTGCTCTAGTTATTCTAAAAATTGGAGCACGCACCCTTCACGTTTCAGATATTTTAAAAACTGGAGCACGCACTCAACCTATTACTAAATAGAATGCACGGCGTAACTCGTAATTTGAAGTCTTGGCTAATGAATCACAAGGAATCATGATTCGACTGCTGCGGGGTGGGCTAAATTTTCACAAACATCTGATTGTTTCATCGCATGCAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGAGCTTCATCTGGAATATCGATAGGGGACGACGGCCAATTAGACTAAACCAAGTTTTTTTAGTCCTAGTGTTCTTTGTTTACAAATTATCTTCCATGGTTAACTCCGAGTATAGTTTTGCTAGTCTTTACATATTTCGGTGTATCATATCACATCTCGGCACATAAATGTTCTCCTGAGTAGGACCAATATTTAGTGAACCATGATGGTTATGTTAATGATCGAGGAAGGACCGATGCTTAATCTTAAAGAATTGTTGGAGTTGAATTCAATATTTGCATGTGATCAATATAATCGACAATCCCCTTTCATTTGGCGATCTATCGTTTGAATCCAATACCAAACCATTAAGGGAAAATCTATGTTAAGCTCCAGCAGATTTAAAATCCATTAAGGTTTC ATGGACCCCACAAATGGAAATAATGCTACCAGCAAAAGCCCAAATTTGGCCTCAAAGCAGAGACTGCGATGGACACATGATCTTCACGAACGATTTGTTAATGCAGTCGCACAACTTGGTGGTCCAGATCGTGCTACACCCAAAGGCGTCCTCAGAGTAATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGAAATATAGGCTTGCAAAATACCTTCCCGACTCCTCGTCTGATGGGAAAAAGACCGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGCTCGTCGGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGA MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPSTPASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSKMILAHQILESSLNSTHKE Homology
BLAST of Cucsat.G1939.T3 vs. ExPASy Swiss-Prot
Match: Q9SJW0 (Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=2 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 4.2e-83 Identity = 183/274 (66.79%), Postives = 211/274 (77.01%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. ExPASy Swiss-Prot
Match: B8ANX9 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. indica OX=39946 GN=PHR1 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 7.4e-40 Identity = 97/183 (53.01%), Postives = 127/183 (69.40%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. ExPASy Swiss-Prot
Match: Q10LZ1 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR1 PE=2 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 7.4e-40 Identity = 97/183 (53.01%), Postives = 127/183 (69.40%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. ExPASy Swiss-Prot
Match: Q94CL7 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=PHR1 PE=1 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 4.8e-39 Identity = 95/189 (50.26%), Postives = 125/189 (66.14%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. ExPASy Swiss-Prot
Match: A2X0Q0 (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica OX=39946 GN=PHR3 PE=3 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 6.3e-39 Identity = 95/187 (50.80%), Postives = 124/187 (66.31%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. NCBI nr
Match: ACA24492.1 (putative myb family transcription factor [Cucumis sativus] >KGN49010.1 hypothetical protein Csa_004184 [Cucumis sativus]) HSP 1 Score: 497 bits (1279), Expect = 8.19e-177 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. NCBI nr
Match: XP_031743095.1 (LOW QUALITY PROTEIN: myb family transcription factor PHL7 [Cucumis sativus]) HSP 1 Score: 497 bits (1279), Expect = 1.76e-176 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. NCBI nr
Match: XP_008440942.1 (PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440943.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440944.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_016899325.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo]) HSP 1 Score: 478 bits (1229), Expect = 4.58e-169 Identity = 256/270 (94.81%), Postives = 258/270 (95.56%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. NCBI nr
Match: XP_038881985.1 (myb family transcription factor PHL7 [Benincasa hispida] >XP_038881986.1 myb family transcription factor PHL7 [Benincasa hispida]) HSP 1 Score: 451 bits (1159), Expect = 1.53e-157 Identity = 242/270 (89.63%), Postives = 247/270 (91.48%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. NCBI nr
Match: XP_022950611.1 (myb family transcription factor PHL7-like [Cucurbita moschata] >XP_022950612.1 myb family transcription factor PHL7-like [Cucurbita moschata] >XP_022950613.1 myb family transcription factor PHL7-like [Cucurbita moschata]) HSP 1 Score: 442 bits (1137), Expect = 3.67e-154 Identity = 238/270 (88.15%), Postives = 248/270 (91.85%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. ExPASy TrEMBL
Match: B3FNK5 (Putative myb family transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G510280 PE=2 SV=1) HSP 1 Score: 497 bits (1279), Expect = 3.96e-177 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. ExPASy TrEMBL
Match: A0A1S3B2B2 (protein PHR1-LIKE 1-like OS=Cucumis melo OX=3656 GN=LOC103485207 PE=3 SV=1) HSP 1 Score: 478 bits (1229), Expect = 2.22e-169 Identity = 256/270 (94.81%), Postives = 258/270 (95.56%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. ExPASy TrEMBL
Match: A0A6J1GFB1 (myb family transcription factor PHL7-like OS=Cucurbita moschata OX=3662 GN=LOC111453658 PE=3 SV=1) HSP 1 Score: 442 bits (1137), Expect = 1.78e-154 Identity = 238/270 (88.15%), Postives = 248/270 (91.85%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. ExPASy TrEMBL
Match: A0A6J1BT33 (myb family transcription factor PHL7 OS=Momordica charantia OX=3673 GN=LOC111005303 PE=3 SV=1) HSP 1 Score: 436 bits (1121), Expect = 1.61e-152 Identity = 233/270 (86.30%), Postives = 243/270 (90.00%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. ExPASy TrEMBL
Match: A0A6J1IPB2 (myb family transcription factor PHL7-like OS=Cucurbita maxima OX=3661 GN=LOC111478721 PE=3 SV=1) HSP 1 Score: 433 bits (1113), Expect = 7.98e-151 Identity = 235/270 (87.04%), Postives = 244/270 (90.37%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. TAIR 10
Match: AT2G01060.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 309.3 bits (791), Expect = 3.0e-84 Identity = 183/274 (66.79%), Postives = 211/274 (77.01%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. TAIR 10
Match: AT2G01060.2 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 236.9 bits (603), Expect = 1.9e-62 Identity = 144/221 (65.16%), Postives = 168/221 (76.02%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. TAIR 10
Match: AT4G28610.1 (phosphate starvation response 1 ) HSP 1 Score: 162.9 bits (411), Expect = 3.4e-40 Identity = 95/189 (50.26%), Postives = 125/189 (66.14%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. TAIR 10
Match: AT5G06800.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 158.7 bits (400), Expect = 6.4e-39 Identity = 87/163 (53.37%), Postives = 116/163 (71.17%), Query Frame = 0
BLAST of Cucsat.G1939.T3 vs. TAIR 10
Match: AT5G29000.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 157.9 bits (398), Expect = 1.1e-38 Identity = 90/164 (54.88%), Postives = 120/164 (73.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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