Cp4.1LG02g02230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGACGTGTTATCCGAAACCAAACAACCGAACAGTTTTCGGGTTTGCCATATATATATGCTTTGTTGAACTGCCTCATTTGTCTATGGTATGGCACCCCCCTCATTTCCCCAAGAAACACGATGGTCGTGACGATCAACTCGATCGGCGCGGTGTTTCAGTTAGTCTACATCTTTCTCTTCATCACATATGCTGAAAAGGGAAGAAAGGTGCTTACTTGTATGCCTATAATATGTACTAGAAATCTAAGTTTGTGGAAGATTTCTGTTTGTTGAAGTTCTATCTTTTGTGTTTGTGACAGATGAAAATGATTGGATTGTTGCTTGCAGTGTTTGCCATTTTCATAGCTATTGTTGCAGGGAGCTTACAGATAGCTAACGTCCCTTTGCGACGAAATGTCGTCGGGATCTTGAGTTGTGCATCTCTCGTATCGATGTTTGCTTCTCCATTGTTCATAATCGTAAGCCTAGTTTGTAAGCTTCTTCTTGTCTACCTTCTGTTGTTGGATGCTTACTTTTCTTGTTCGTTCGATTTTTTGACGCTCTCAGAATTTGGTGATTCGAACAAAGAGTGTGGAGTTTATGCCGTTTTATCTCTCACTTTCGACCTTCCTCATGAGCGTATCGTTTTTCCTCTATGGACTGTTCAATTACGATCTGTTCGTTTATGTAAGCATCGTCTTACTCGTTTCCTTTGTTCAATTCATTGGATTGAGTATGTGACATAAATTTGTATCTTGTTGTCAAACTTCAGGCACCAAATGGGATAGGAGCTGTGTTGGGGATAGTACAATTGGTCTTGTACTTCTACTATAGTCGAGTCGCTAAAGAGGAGCCTAGAGAACCTCTACTTGTATCCTACTCGTAAATACGTACATTGTGTATTTACATAGCGATAATAAGGTAAGACTCCATGTATGTACTCTTTTTGTCAATTCTCGAGCCCCCACGGAGCTCAACTGTAATAGCTCAAGCCCACCGCTAGCAGATATTGTCTGCTTCGGCCCATTACGTATCGCTGTCAGTCTTACGATTTTAAAACGCGTATGTTAGGGAGAGGTTTCCACACCTTTATGAGGAATGATTCGTTCTACTCTCCAACCGATGTGAGATCTCACAATCCACCCCCCTTATAAGGACATGAGGCGGCGTGCCAACAAGGACATTGGGTCTCGAAAGGGGTGGAGTGGGGGGTCCCACGTTAATTGGATAAGGAAACGAGTGTCAGCAAGGATGCTGGGTTCTGAAGAGGGGTGGATTGTGAGATCCCACGTCGGGGGAGGAGAACGAAACATTCTTTACAAGGGTGTAGTAACGTCTCCCTAGCAGACATGTTTTAAAATTTTTGAGGAGAAGCTCGAAAAGAACAATATCTGTCAGCGGTGGGCTTGAGCCGTTACATTAACTATCTAGTTTTTTTCGGATTTCTGGGAGTGTTATTACTCAATGTGGCAAATGGAAGGATAACCAGTATGAACTTTTTCCATATGCAACAGGAACAGCACAGAGCATTGGTGCATAGTTGAGTGTTAGCCAACGAGCCGTTTTCTGGCTATACGGTGTGTTTGTTGTAATATCTATCACTCTCATTCATTTCTTCAGTTCAATTGATTTGTTTTGTTTTTTCAGCTGTCCATCAGCTAAATGATAAAGAGCTTGTACTTATTTTGGGCTTGATCAGCTACTATTAGCTCGTTCTTAAACGCGCTAGCAAGTAAATATTTGACTCGGGGGTTGAGTTGCATGATATGGTATTGGAAAGTCGAAGGTTATTCCATGAGTTTGTTTATCTGGAGAATCTCGTCTTTCAGGCTAGACTAGACACTCACCTGTTTGAGTATAATATACTCTACCGTCCTCGAACTCCCATTTTGAAACTTCGTGAACCATGTATTTTTTTATATCTCATATTCTCGAAGCAATAAATGATTTTTCAAAATTCAGTTTCA TCGACGTGTTATCCGAAACCAAACAACCGAACAGTTTTCGGGTTTGCCATATATATATGCTTTGTTGAACTGCCTCATTTGTCTATGGTATGGCACCCCCCTCATTTCCCCAAGAAACACGATGGTCGTGACGATCAACTCGATCGGCGCGGTGTTTCAGTTAGTCTACATCTTTCTCTTCATCACATATGCTGAAAAGGGAAGAAAGATGAAAATGATTGGATTGTTGCTTGCAGTGTTTGCCATTTTCATAGCTATTGTTGCAGGGAGCTTACAGATAGCTAACGTCCCTTTGCGACGAAATGTCGTCGGGATCTTGAGTTGTGCATCTCTCGTATCGATGTTTGCTTCTCCATTGTTCATAATCAATTTGGTGATTCGAACAAAGAGTGTGGAGTTTATGCCGTTTTATCTCTCACTTTCGACCTTCCTCATGAGCGTATCGTTTTTCCTCTATGGACTGTTCAATTACGATCTGTTCGTTTATGCACCAAATGGGATAGGAGCTGTGTTGGGGATAGTACAATTGGTCTTGTACTTCTACTATAGTCGAGTCGCTAAAGAGGAGCCTAGAGAACCTCTACTTGTATCCTACTCGTAAATACGTACATTGTGTATTTACATAGCGATAATAAGGAACAGCACAGAGCATTGGTGCATAGTTGAGTGTTAGCCAACGAGCCGTTTTCTGGCTATACGGTGTGTTTGTTGTAATATCTATCACTCTCATTCATTTCTTCAGTTCAATTGATTTGTTTTGTTTTTTCAGCTGTCCATCAGCTAAATGATAAAGAGCTTGTACTTATTTTGGGCTTGATCAGCTACTATTAGCTCGTTCTTAAACGCGCTAGCAAGTAAATATTTGACTCGGGGGTTGAGTTGCATGATATGGTATTGGAAAGTCGAAGGTTATTCCATGAGTTTGTTTATCTGGAGAATCTCGTCTTTCAGGCTAGACTAGACACTCACCTGTTTGAGTATAATATACTCTACCGTCCTCGAACTCCCATTTTGAAACTTCGTGAACCATGTATTTTTTTATATCTCATATTCTCGAAGCAATAAATGATTTTTCAAAATTCAGTTTCA ATGGTCGTGACGATCAACTCGATCGGCGCGGTGTTTCAGTTAGTCTACATCTTTCTCTTCATCACATATGCTGAAAAGGGAAGAAAGATGAAAATGATTGGATTGTTGCTTGCAGTGTTTGCCATTTTCATAGCTATTGTTGCAGGGAGCTTACAGATAGCTAACGTCCCTTTGCGACGAAATGTCGTCGGGATCTTGAGTTGTGCATCTCTCGTATCGATGTTTGCTTCTCCATTGTTCATAATCAATTTGGTGATTCGAACAAAGAGTGTGGAGTTTATGCCGTTTTATCTCTCACTTTCGACCTTCCTCATGAGCGTATCGTTTTTCCTCTATGGACTGTTCAATTACGATCTGTTCGTTTATGCACCAAATGGGATAGGAGCTGTGTTGGGGATAGTACAATTGGTCTTGTACTTCTACTATAGTCGAGTCGCTAAAGAGGAGCCTAGAGAACCTCTACTTGTATCCTACTCGTAA MVVTINSIGAVFQLVYIFLFITYAEKGRKMKMIGLLLAVFAIFIAIVAGSLQIANVPLRRNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSVSFFLYGLFNYDLFVYAPNGIGAVLGIVQLVLYFYYSRVAKEEPREPLLVSYS Homology
BLAST of Cp4.1LG02g02230 vs. ExPASy Swiss-Prot
Match: Q9LH79 (Bidirectional sugar transporter SWEET2 OS=Arabidopsis thaliana OX=3702 GN=SWEET2 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 8.2e-50 Identity = 111/159 (69.81%), Postives = 126/159 (79.25%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. ExPASy Swiss-Prot
Match: P0DKJ4 (Bidirectional sugar transporter SWEET2a OS=Sorghum bicolor OX=4558 GN=SWEET2A PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 7.7e-40 Identity = 93/159 (58.49%), Postives = 119/159 (74.84%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. ExPASy Swiss-Prot
Match: A2WR31 (Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. indica OX=39946 GN=SWEET2A PE=3 SV=2) HSP 1 Score: 156.8 bits (395), Expect = 2.1e-37 Identity = 90/159 (56.60%), Postives = 118/159 (74.21%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. ExPASy Swiss-Prot
Match: Q5JJY5 (Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET2A PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.1e-37 Identity = 90/159 (56.60%), Postives = 118/159 (74.21%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. ExPASy Swiss-Prot
Match: B8A833 (Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. indica OX=39946 GN=SWEET2B PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 5.7e-35 Identity = 88/159 (55.35%), Postives = 115/159 (72.33%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. NCBI nr
Match: XP_023525425.1 (bidirectional sugar transporter SWEET2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290 bits (741), Expect = 3.11e-97 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. NCBI nr
Match: XP_022982299.1 (bidirectional sugar transporter SWEET2-like [Cucurbita maxima] >XP_022982300.1 bidirectional sugar transporter SWEET2-like [Cucurbita maxima]) HSP 1 Score: 285 bits (729), Expect = 2.83e-95 Identity = 154/159 (96.86%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. NCBI nr
Match: XP_022940245.1 (bidirectional sugar transporter SWEET2-like [Cucurbita moschata] >KAG6607945.1 Bidirectional sugar transporter SWEET2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037460.1 Bidirectional sugar transporter SWEET2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 281 bits (720), Expect = 6.64e-94 Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. NCBI nr
Match: XP_023534957.1 (bidirectional sugar transporter SWEET2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265 bits (676), Expect = 3.30e-87 Identity = 141/159 (88.68%), Postives = 152/159 (95.60%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. NCBI nr
Match: KAG6591774.1 (Bidirectional sugar transporter SWEET2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024653.1 Bidirectional sugar transporter SWEET2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 264 bits (675), Expect = 4.68e-87 Identity = 141/159 (88.68%), Postives = 152/159 (95.60%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. ExPASy TrEMBL
Match: A0A6J1J2A3 (Bidirectional sugar transporter SWEET OS=Cucurbita maxima OX=3661 GN=LOC111481175 PE=3 SV=1) HSP 1 Score: 285 bits (729), Expect = 1.37e-95 Identity = 154/159 (96.86%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. ExPASy TrEMBL
Match: A0A6J1FQ12 (Bidirectional sugar transporter SWEET OS=Cucurbita moschata OX=3662 GN=LOC111445926 PE=3 SV=1) HSP 1 Score: 281 bits (720), Expect = 3.21e-94 Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. ExPASy TrEMBL
Match: A0A6J1F687 (Bidirectional sugar transporter SWEET OS=Cucurbita moschata OX=3662 GN=LOC111442723 PE=3 SV=1) HSP 1 Score: 263 bits (672), Expect = 6.48e-87 Identity = 140/159 (88.05%), Postives = 152/159 (95.60%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. ExPASy TrEMBL
Match: A0A6J1IKK9 (Bidirectional sugar transporter SWEET OS=Cucurbita maxima OX=3661 GN=LOC111477097 PE=3 SV=1) HSP 1 Score: 261 bits (666), Expect = 5.30e-86 Identity = 140/159 (88.05%), Postives = 151/159 (94.97%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. ExPASy TrEMBL
Match: A0A5A7VH90 (Bidirectional sugar transporter SWEET OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00370 PE=3 SV=1) HSP 1 Score: 253 bits (645), Expect = 8.29e-83 Identity = 134/159 (84.28%), Postives = 148/159 (93.08%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. TAIR 10
Match: AT3G14770.1 (Nodulin MtN3 family protein ) HSP 1 Score: 198.0 bits (502), Expect = 5.8e-51 Identity = 111/159 (69.81%), Postives = 126/159 (79.25%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. TAIR 10
Match: AT1G21460.1 (Nodulin MtN3 family protein ) HSP 1 Score: 111.3 bits (277), Expect = 7.2e-25 Identity = 65/142 (45.77%), Postives = 88/142 (61.97%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. TAIR 10
Match: AT5G13170.1 (senescence-associated gene 29 ) HSP 1 Score: 95.5 bits (236), Expect = 4.1e-20 Identity = 59/154 (38.31%), Postives = 97/154 (62.99%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. TAIR 10
Match: AT4G10850.1 (Nodulin MtN3 family protein ) HSP 1 Score: 95.1 bits (235), Expect = 5.3e-20 Identity = 62/165 (37.58%), Postives = 100/165 (60.61%), Query Frame = 0
BLAST of Cp4.1LG02g02230 vs. TAIR 10
Match: AT4G25010.1 (Nodulin MtN3 family protein ) HSP 1 Score: 93.6 bits (231), Expect = 1.5e-19 Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|