Cp4.1LG01g03920 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g03920
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic
Location	Cp4.1LG01: 1561399 .. 1562741 (-)
RNA-Seq Expression	Cp4.1LG01g03920
Synteny	Cp4.1LG01g03920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCGGGAATTCTCTTCCCCGCCACTCTAATTCCATGGAGTCCCAATTTCAACTGCACTCTCTGCACTGTTCGTCGCTCTTTCCTGCGCATTGTAAGGGCTTCTTCTTCTTCTTCCTCGCTCTTGCGCACTTACGTCGGTGGAGTTTCTCTCTTAGTCGTCCTCTTTAATAATCGCGCCGTTTCTGGATTGCTCCGTCGCCGATGCCAGCAGGTTCATCGGTAAAATTTAAACATGTATTGCTTATTCTGGAATTTTGTAAATACATCACCACAATGAGTAGTAAATTAAGAGAAGAAATCATCCATTTGGCGAGGATGAAATTTCTTTCTTCGATAACTTCGTCGATAATTATGTTTTCCTATTTTGGCGGTGTGATTTTGCGACTAACATTCGTTCTGAGCTCTGACTGAACGTAATTAGATGTTGTATTAATAAAAATAAAACTATTATCAGTTTGCAGTCGAGAGCTATCATCAGATTTTCATACTCAACCTCCCCCACTTTTGTTGAACGTGATTAGATGTTGTATTGATAACAATAGAACTAGTAACGTCTGAGTTGTTGTCGCAATACACTTTATGTAACTTTCTCAATGATGTTTTAGAACTGTGAATGCGATGTATCTGATAAATTACTTTTGGTATTTAACTCTAAAGACAATTCTTAGAGGAGGAAGGAAAAATCCTGGACAAGTGGTTAATGGTTACTTTTTGCTGCTTACTCTTAGGGTATGGAAGTATCTGTTAGAGGTGGCATGCTGCAGGTTTTTTATTGTTGGTTATGATGAGATGTGTATATTTCAAGTTGGTTTTGCTGCGGGTGATGGTGAGGCCGAACATGTGGAAGCTAGTAAATTGATGCAGGGATTGCTCTATCAAGGAATTCTCAAATTTCAAGCTCGTGAGTAGTAAATGATCTGTGTACAGAGATCAGCACACAATGTACTACTTGATTGTTGTGCAATTGTAAACATCTGCAACTATTCGTTTTAAGAGACTATCTTTCCCAATATTGTCGAGAGCTATTTGGCTAATCTCTCTTTTATACAGGGAAGTCGGAGCTGCCATTTCTTACTTCAAATACTCAGGTACATGCTTAATACTATTCAAGGTTGTTATTAGATTTGTTCCCTTTTCATTTTTCTTTTATTTTTTTGGTATATATATAAGGCAGATAGTTTTCTACAGTGGCTTCATTCTTGGGTATTTGTCACTCTCTATAAGTGGTAGACCTATTAACTACCGAACTTGTTTTTGTCTCTCAATGTTTAACTTATTATGGTTGGTGTGCAAATGAAGCTCGAGTTTGAAGCATCATTTGGTGCACTTGATGAATAA

mRNA sequence

ATGGAAGCGGGAATTCTCTTCCCCGCCACTCTAATTCCATGGAGTCCCAATTTCAACTGCACTCTCTGCACTGTTCGTCGCTCTTTCCTGCGCATTGTAAGGGCTTCTTCTTCTTCTTCCTCGCTCTTGCGCACTTACGTCGGTGGAGTTTCTCTCTTAGTCGTCCTCTTTAATAATCGCGCCGTTTCTGGATTGCTCCGTCGCCGATGCCAGCAGGTTCATCGGGTATGGAAGTATCTGTTAGAGGTGGCATGCTGCAGGTTTTTTATTGTTGGTTATGATGAGATGTGTATATTTCAAGTTGGTTTTGCTGCGGGTGATGGTGAGGCCGAACATGTGGAAGCTAGTAAATTGATGCAGGGATTGCTCTATCAAGGAATTCTCAAATTTCAAGCTCGGAAGTCGGAGCTGCCATTTCTTACTTCAAATACTCAGCTCGAGTTTGAAGCATCATTTGGTGCACTTGATGAATAA

Coding sequence (CDS)

ATGGAAGCGGGAATTCTCTTCCCCGCCACTCTAATTCCATGGAGTCCCAATTTCAACTGCACTCTCTGCACTGTTCGTCGCTCTTTCCTGCGCATTGTAAGGGCTTCTTCTTCTTCTTCCTCGCTCTTGCGCACTTACGTCGGTGGAGTTTCTCTCTTAGTCGTCCTCTTTAATAATCGCGCCGTTTCTGGATTGCTCCGTCGCCGATGCCAGCAGGTTCATCGGGTATGGAAGTATCTGTTAGAGGTGGCATGCTGCAGGTTTTTTATTGTTGGTTATGATGAGATGTGTATATTTCAAGTTGGTTTTGCTGCGGGTGATGGTGAGGCCGAACATGTGGAAGCTAGTAAATTGATGCAGGGATTGCTCTATCAAGGAATTCTCAAATTTCAAGCTCGGAAGTCGGAGCTGCCATTTCTTACTTCAAATACTCAGCTCGAGTTTGAAGCATCATTTGGTGCACTTGATGAATAA

Protein sequence

MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSLLRTYVGGVSLLVVLFNNRAVSGLLRRRCQQVHRVWKYLLEVACCRFFIVGYDEMCIFQVGFAAGDGEAEHVEASKLMQGLLYQGILKFQARKSELPFLTSNTQLEFEASFGALDE

Homology

[Close]

BLAST of Cp4.1LG01g03920 vs. ExPASy Swiss-Prot
Match: Q6NQK9 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB4 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-07
Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 77  WKYLLEVACCRFFIVGYDEMCIFQVGFAAGDGEAEH---VEASKLMQGLLYQGILKFQAR 136
           W+ L    CC+  ++ Y+ +C+ Q+G  A   E +    V+  KLMQG +Y+G++K +A+
Sbjct: 158 WESLKVATCCKSLVIVYNGICLIQIGMVAESPEDKKTVIVKTDKLMQGSVYRGVMKSKAQ 217

Query: 137 -----------KSELPFLTSNTQ 146
                      +SELPFL +NTQ
Sbjct: 218 SYLANLSLYPGRSELPFLPANTQ 240

[Close]

BLAST of Cp4.1LG01g03920 vs. NCBI nr
Match: KAG6600149.1 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251 bits (641), Expect = 2.65e-83
Identity = 128/138 (92.75%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSLLRTYVGGVSLLVVLFNNR 60
           MEAGILFPATLIPWSPNFNCTLCTVRRSF RIVRASSSSSSLLRTYVGGVSLLVVLFNNR
Sbjct: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFPRIVRASSSSSSLLRTYVGGVSLLVVLFNNR 60

Query: 61  AVSGLLRRRCQQVHRVWKYLLEVACCRFFIVGYDEMCIFQVGFAA----GDGEAEHVEAS 120
           AVSGLLRRRCQQVHRVWKYL EVACCRF IVGYDEMCIFQVGFAA    GDGEAEHVEA 
Sbjct: 61  AVSGLLRRRCQQVHRVWKYLSEVACCRFLIVGYDEMCIFQVGFAAESAAGDGEAEHVEAG 120

Query: 121 KLMQGLLYQGILKFQARK 134
           KLMQGLLYQGILK QAR+
Sbjct: 121 KLMQGLLYQGILKSQARE 138

[Close]

BLAST of Cp4.1LG01g03920 vs. NCBI nr
Match: KAG7030817.1 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243 bits (621), Expect = 2.96e-80
Identity = 125/138 (90.58%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSLLRTYVGGVSLLVVLFNNR 60
           MEAGILFPATLIPWSPNFNCTLCTVRRSF RIVRASSSSSSLLRTYVGGVSLLVVLFNN 
Sbjct: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFPRIVRASSSSSSLLRTYVGGVSLLVVLFNNC 60

Query: 61  AVSGLLRRRCQQVHRVWKYLLEVACCRFFIVGYDEMCIFQVGFAA----GDGEAEHVEAS 120
           AVSGLLRRRCQQVHRVWK L EVACCRF IVGYDEMCIF+VGFAA    GDGEAEHVEA 
Sbjct: 61  AVSGLLRRRCQQVHRVWKCLSEVACCRFLIVGYDEMCIFEVGFAAESAAGDGEAEHVEAG 120

Query: 121 KLMQGLLYQGILKFQARK 134
           KLMQGLLYQGILK QAR+
Sbjct: 121 KLMQGLLYQGILKSQARE 138

[Close]

BLAST of Cp4.1LG01g03920 vs. NCBI nr
Match: XP_022984820.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 143 bits (360), Expect = 1.37e-38
Identity = 105/241 (43.57%), Postives = 114/241 (47.30%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSL------------------ 60
           MEAGI FP T I WS +  CTLC VRRSF RI+RASS +S                    
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60

Query: 61  -------LRTYVGGVSLLVVLFNNRAVSGLL----------------------------- 120
                  L  YVGG+SLLVVLFN RAVSG+                              
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFN-RAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLV 120

Query: 121 -------------------RRRCQQVHR--------VWKYLLEVACCRFFIVGYDEMCIF 145
                               R C  +          VWK L EV CCR  +V YD MCIF
Sbjct: 121 WLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIF 180

[Close]

BLAST of Cp4.1LG01g03920 vs. NCBI nr
Match: XP_022956789.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita moschata] >KAG6601389.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140 bits (354), Expect = 1.08e-37
Identity = 104/241 (43.15%), Postives = 113/241 (46.89%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSL------------------ 60
           MEAGI FP T I WS +  CTLC VRRSF RI+RASS +S                    
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60

Query: 61  -------LRTYVGGVSLLVVLFNNRAVSGLL----------------------------- 120
                  L  YVGG+SLLVVLFN RAVSG+                              
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFN-RAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLV 120

Query: 121 -------------------RRRCQQVHR--------VWKYLLEVACCRFFIVGYDEMCIF 145
                               R C  +          VWK L EV CCR  +V YD MCIF
Sbjct: 121 WLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIF 180

[Close]

BLAST of Cp4.1LG01g03920 vs. NCBI nr
Match: KAG7032167.1 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140 bits (353), Expect = 1.55e-37
Identity = 104/242 (42.98%), Postives = 113/242 (46.69%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSL------------------ 60
           MEAGI FP T I WS +  CTLC VRRSF RI+RASS +S                    
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60

Query: 61  -------LRTYVGGVSLLVVLFNNRAVSGLL----------------------------- 120
                  L  YVGG+SLLVVLFN RAVSG+                              
Sbjct: 61  NNDGVRSLPIYVGGISLLVVLFN-RAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLV 120

Query: 121 -------------------RRRCQQVHR--------VWKYLLEVACCRFFIVGYDEMCIF 145
                               R C  +          VWK L EV CCR  +V YD MCIF
Sbjct: 121 WLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIF 180

[Close]

BLAST of Cp4.1LG01g03920 vs. ExPASy TrEMBL
Match: A0A6J1J9M5 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482990 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 6.63e-39
Identity = 105/241 (43.57%), Postives = 114/241 (47.30%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSL------------------ 60
           MEAGI FP T I WS +  CTLC VRRSF RI+RASS +S                    
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSK 60

Query: 61  -------LRTYVGGVSLLVVLFNNRAVSGLL----------------------------- 120
                  L  YVGG+SLLVVLFN RAVSG+                              
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFN-RAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLV 120

Query: 121 -------------------RRRCQQVHR--------VWKYLLEVACCRFFIVGYDEMCIF 145
                               R C  +          VWK L EV CCR  +V YD MCIF
Sbjct: 121 WLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIF 180

[Close]

BLAST of Cp4.1LG01g03920 vs. ExPASy TrEMBL
Match: A0A6J1H029 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458387 PE=4 SV=1)

HSP 1 Score: 140 bits (354), Expect = 5.21e-38
Identity = 104/241 (43.15%), Postives = 113/241 (46.89%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSL------------------ 60
           MEAGI FP T I WS +  CTLC VRRSF RI+RASS +S                    
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60

Query: 61  -------LRTYVGGVSLLVVLFNNRAVSGLL----------------------------- 120
                  L  YVGG+SLLVVLFN RAVSG+                              
Sbjct: 61  NNDAVRSLPIYVGGISLLVVLFN-RAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLV 120

Query: 121 -------------------RRRCQQVHR--------VWKYLLEVACCRFFIVGYDEMCIF 145
                               R C  +          VWK L EV CCR  +V YD MCIF
Sbjct: 121 WLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIF 180

[Close]

BLAST of Cp4.1LG01g03920 vs. ExPASy TrEMBL
Match: A0A6J1DBC0 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019127 PE=4 SV=1)

HSP 1 Score: 134 bits (338), Expect = 1.42e-35
Identity = 101/251 (40.24%), Postives = 114/251 (45.42%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSL------------------ 60
           MEAGI F    I WSPNF C LC VRRSF RI+RASSSSSS                   
Sbjct: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60

Query: 61  -----------------LRTYVGGVSLLVVLFNNRAVSGLL------------------- 120
                            L  +VGG+SLLVVLFN RAVSG+                    
Sbjct: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFN-RAVSGIAPVADASSSQSRADLLTLGL 120

Query: 121 -----------------------------RRRCQQVHR--------VWKYLLEVACCRFF 145
                                        +R C  +          VW+ L EV CCR  
Sbjct: 121 AVTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSL 180

[Close]

BLAST of Cp4.1LG01g03920 vs. ExPASy TrEMBL
Match: A0A6J1DCN6 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019127 PE=4 SV=1)

HSP 1 Score: 134 bits (338), Expect = 1.59e-35
Identity = 101/251 (40.24%), Postives = 114/251 (45.42%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSL------------------ 60
           MEAGI F    I WSPNF C LC VRRSF RI+RASSSSSS                   
Sbjct: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60

Query: 61  -----------------LRTYVGGVSLLVVLFNNRAVSGLL------------------- 120
                            L  +VGG+SLLVVLFN RAVSG+                    
Sbjct: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFN-RAVSGIAPVADASSSQSRADLLTLGL 120

Query: 121 -----------------------------RRRCQQVHR--------VWKYLLEVACCRFF 145
                                        +R C  +          VW+ L EV CCR  
Sbjct: 121 AVTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSL 180

[Close]

BLAST of Cp4.1LG01g03920 vs. ExPASy TrEMBL
Match: A0A0A0KQF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603980 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 4.68e-32
Identity = 97/241 (40.25%), Postives = 110/241 (45.64%), Query Frame = 0


Query: 1   MEAGILFPATLIPWSPNFNCTLCTVRRSFLRIVRASSSSSSL------------------ 60
           MEAGI FP T IPW+ NF  T  ++R SF  IVRASSS+S                    
Sbjct: 1   MEAGIFFPLTSIPWTFNFKRTHSSLRPSFPLIVRASSSTSQRSYRGPKPSTNLVADWVSN 60

Query: 61  -------LRTYVGGVSLLVVLFNNRAVSGLL----------------------------- 120
                  L  YVGG+SLL+VLFN RAVSG+                              
Sbjct: 61  NDDTVRSLPIYVGGISLLIVLFN-RAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLV 120

Query: 121 -------------------RRRCQQVHR--------VWKYLLEVACCRFFIVGYDEMCIF 145
                               R C  +          VWK L EV CCR  +V YD  CIF
Sbjct: 121 WLSIRPKSITPVNPLGVENERICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGTCIF 180

[Close]

BLAST of Cp4.1LG01g03920 vs. TAIR 10
Match: AT1G59840.1 (cofactor assembly of complex C )

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-08
Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 77  WKYLLEVACCRFFIVGYDEMCIFQVGFAAGDGEAEH---VEASKLMQGLLYQGILKFQAR 136
           W+ L    CC+  ++ Y+ +C+ Q+G  A   E +    V+  KLMQG +Y+G++K +A+
Sbjct: 158 WESLKVATCCKSLVIVYNGICLIQIGMVAESPEDKKTVIVKTDKLMQGSVYRGVMKSKAQ 217

Query: 137 -----------KSELPFLTSNTQ 146
                      +SELPFL +NTQ
Sbjct: 218 SYLANLSLYPGRSELPFLPANTQ 240

[Close]

BLAST of Cp4.1LG01g03920 vs. TAIR 10
Match: AT1G59840.2 (cofactor assembly of complex C )

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-08
Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 77  WKYLLEVACCRFFIVGYDEMCIFQVGFAAGDGEAEH---VEASKLMQGLLYQGILKFQAR 136
           W+ L    CC+  ++ Y+ +C+ Q+G  A   E +    V+  KLMQG +Y+G++K +A+
Sbjct: 158 WESLKVATCCKSLVIVYNGICLIQIGMVAESPEDKKTVIVKTDKLMQGSVYRGVMKSKAQ 217

Query: 137 -----------KSELPFLTSNTQ 146
                      +SELPFL +NTQ
Sbjct: 218 SYLANLSLYPGRSELPFLPANTQ 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g03920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQK9	3.8e-07	34.94	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidop...	[more]

BLAST of Cp4.1LG01g03920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600149.1	2.65e-83	92.75	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, partial [C...	[more]
KAG7030817.1	2.96e-80	90.58	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, partial [C...	[more]
XP_022984820.1	1.37e-38	43.57	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]
XP_022956789.1	1.08e-37	43.15	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]
KAG7032167.1	1.55e-37	42.98	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]

BLAST of Cp4.1LG01g03920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J9M5	6.63e-39	43.57	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbit...	[more]
A0A6J1H029	5.21e-38	43.15	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbit...	[more]
A0A6J1DBC0	1.42e-35	40.24	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X2 ...	[more]
A0A6J1DCN6	1.59e-35	40.24	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 ...	[more]
A0A0A0KQF1	4.68e-32	40.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603980 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g03920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59840.1	2.7e-08	34.94	cofactor assembly of complex C	[more]
AT1G59840.2	2.7e-08	34.94	cofactor assembly of complex C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044705	COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4	PANTHER	PTHR34943	FAMILY NOT NAMED	coord: 73..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g03920.1	Cp4.1LG01g03920.1	mRNA