Cp4.1LG06g02350.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g02350.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Embryo defective 1273, putative
Location	Cp4.1LG06: 1195336 .. 1197626 (-)
Sequence length	1184
RNA-Seq Expression	Cp4.1LG06g02350.1
Synteny	Cp4.1LG06g02350.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTATAGAAGACGAAGAGAATCCTGAATCAGAGAACCCGCCCAACCCTACATAGATAGAGAAAGAGAGGGAAGATTAATGTATAGAAGACGAAGGCGATAACGGCTAACGGCTAACGGCGAATTCAGGGACATCAAATGGCGCTGCCGGCGTCAATTCTGCTGCGCTCCTTATCCCTCACGTCCAGGGTAAAAAGCTTGTTTATCGACTCGCTTGATTTATGATGAATTACCAAATGAACTGATTGAGCTCGATAATTTACTTGCCTTAGTTTCTTTTAGACATTTCTTTAATTTGTTAGATTACTTCAGGACTCAAAGAAGTCAAGTGTGTGCAAATTTCTTTATATCTTCTTCTAGGTTTATTGGTATAATCGTATTGACTGTAGGCTAATTGTGATTGAATGCGGGAGAAAGAGGTTTGTATCATTTATTACGCTTTGAACCTACTGGATACCAGTTGCTTCAGGGAATGGACTGATTCCACTTCCAAAATTTCAAGGGAAAATGTTGATGGGATTCTGAAGAATAAGAAATGGTGAATTGCTGGGGGTTTAAAGTAGTTAATTTAGGTAGTTTTGGTTTCGAAAATAGAATACTGTTGATTTTGATTTTGATTTAGTTCATTAATTTAGTAGACTTGCTAGTTTTTTGAGATTTTTCTTGTTCTGGTGTCACACTTTGGGTTGTGTTTGGCAACTTTTGCTATTACGGATGCTTATGCTTGTGTTTGGCAACTCATAAGCTCAAGTGTTTGGGTTGGTTAATGATTTAACATGGTATTAAATGTGAGATCCCACGTCGGTTGGGGAGAAGAATAAAACATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGCGTAAAAACCTTGAGAGGAAGTTCGAAAGGGAAAACTTGAAAGGGAAAGTCCAAAGAAGACAATATCTACTAGTGGTAGGCTTGAACGGTTACATTAGAGTAGTAACTCCTAAGTTTGAACCTGTAATGTCACTTAGTGGGTCTTCTACTAATTTCCAAGCCCATGAGGGGAGAGTTTTAAAAGCACAAAAATAATTGAATTTACTGTACCACGTCAACCGAAGTTTCTAAGTTGATTGGTGATTTAACGAAATGAGATTTTGGATATTTTGCTCACTTTGAGATGCATTTACCCCTTGTTTTATGACCCTTGATCCAACATAGGCTTGAGAATGTATTTGCATATTTCTGCAGATTAGACTGCTCAAGGAGACACCATCGTTCGGGCCTAATAGCTGCTTGCCGCTGCTTGGCAGTCGCCGAGCTAGCATTGCTTGTTCAATGAAAGCAAAAATGGCTGGGTTTATGGATTCTAATTCTATGCCCATACGAATTGAAAATTTGAAAGAGAAGATGCAAGAGGTCATGCCTGAACCAGTTAAAACTTTTCCATGGAAGGATGCAGAGAAGATACTGGTGGAGAGACTGCTTTTTATGGGAAAGGAGACAGTGAAGTGGTCTGTTCTCTTGTTCTTTGTTGTTAGCTCCTTATCAGATTTTGTAGCATCCATAGTTAAAAACCAGGAGTTATTGATTCCCATTGGTCTCTTTGCTGGTGTCTTGTTGACTAACCTTTTAAAAGAGATATCTCAAGAAGTGTTTGGCAACTCTGAGGTACATTTTTTTTTTTTTTTACTTTATTCCATATACTTCAATTTTTCTTCATTCTACAAGTAATAGAAAATCAACCATTCTATAGGAATCAAGCTTCAAGAAGCAACTTTACGGTCTCGGTTCCTTCTTCGTTCTCGTGAAGCTAATTACTTATGGCCTCACAATTCAAGTACAGACATTTCCTCTGCATGTAGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAAAAATTTGTCAAGAGAAAGAAATGGACTGAATGAACAGAGCCCTTCAGTTGGTCAAGGTACGTCTTAAGCATGGACGAATTAGATTGTTTCGAGTGTGTCTATATTTGCTACCATGAAGAATCTGGTCGTCGTGTAACGATGGAAAACCATAATATGATGAGATGTATGTCAACCTTGTTCATCATTTAGAGACACATTGATGAGCCAGTCATGTATGAGTAGGTTTAATTTTCTTTGAGTTCAACAAAATGCGGGTGGAGGGATTTGAACTCTTGACCTTTGGGTCGAAGACATATTTAACTAGTGAGTTATGCTCAAATTTGCATGTATGAGTAGATTGTACGAATGAAATTTTTTGCTCTGGAAGGTAATTCTAGCTCGGTATTGTGTATCGGCTTCATAATTTGATAGTGAGCAATGTTTGGTGGCGT

mRNA sequence

TGTATAGAAGACGAAGAGAATCCTGAATCAGAGAACCCGCCCAACCCTACATAGATAGAGAAAGAGAGGGAAGATTAATGTATAGAAGACGAAGGCGATAACGGCTAACGGCTAACGGCGAATTCAGGGACATCAAATGGCGCTGCCGGCGTCAATTCTGCTGCGCTCCTTATCCCTCACGTCCAGGATTAGACTGCTCAAGGAGACACCATCGTTCGGGCCTAATAGCTGCTTGCCGCTGCTTGGCAGTCGCCGAGCTAGCATTGCTTGTTCAATGAAAGCAAAAATGGCTGGGTTTATGGATTCTAATTCTATGCCCATACGAATTGAAAATTTGAAAGAGAAGATGCAAGAGGTCATGCCTGAACCAGTTAAAACTTTTCCATGGAAGGATGCAGAGAAGATACTGGTGGAGAGACTGCTTTTTATGGGAAAGGAGACAGTGAAGTGGTCTGTTCTCTTGTTCTTTGTTGTTAGCTCCTTATCAGATTTTGTAGCATCCATAGTTAAAAACCAGGAGTTATTGATTCCCATTGGTCTCTTTGCTGGTGTCTTGTTGACTAACCTTTTAAAAGAGATATCTCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAGCAACTTTACGGTCTCGGTTCCTTCTTCGTTCTCGTGAAGCTAATTACTTATGGCCTCACAATTCAAGTACAGACATTTCCTCTGCATGTAGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAAAAATTTGTCAAGAGAAAGAAATGGACTGAATGAACAGAGCCCTTCAGTTGGTCAAGGTACGTCTTAAGCATGGACGAATTAGATTGTTTCGAGTGTGTCTATATTTGCTACCATGAAGAATCTGGTCGTCGTGTAACGATGGAAAACCATAATATGATGAGATGTATGTCAACCTTGTTCATCATTTAGAGACACATTGATGAGCCAGTCATGTATGAGTAGGTTTAATTTTCTTTGAGTTCAACAAAATGCGGGTGGAGGGATTTGAACTCTTGACCTTTGGGTCGAAGACATATTTAACTAGTGAGTTATGCTCAAATTTGCATGTATGAGTAGATTGTACGAATGAAATTTTTTGCTCTGGAAGGTAATTCTAGCTCGGTATTGTGTATCGGCTTCATAATTTGATAGTGAGCAATGTTTGGTGGCGT

Coding sequence (CDS)

ATGGCGCTGCCGGCGTCAATTCTGCTGCGCTCCTTATCCCTCACGTCCAGGATTAGACTGCTCAAGGAGACACCATCGTTCGGGCCTAATAGCTGCTTGCCGCTGCTTGGCAGTCGCCGAGCTAGCATTGCTTGTTCAATGAAAGCAAAAATGGCTGGGTTTATGGATTCTAATTCTATGCCCATACGAATTGAAAATTTGAAAGAGAAGATGCAAGAGGTCATGCCTGAACCAGTTAAAACTTTTCCATGGAAGGATGCAGAGAAGATACTGGTGGAGAGACTGCTTTTTATGGGAAAGGAGACAGTGAAGTGGTCTGTTCTCTTGTTCTTTGTTGTTAGCTCCTTATCAGATTTTGTAGCATCCATAGTTAAAAACCAGGAGTTATTGATTCCCATTGGTCTCTTTGCTGGTGTCTTGTTGACTAACCTTTTAAAAGAGATATCTCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAGCAACTTTACGGTCTCGGTTCCTTCTTCGTTCTCGTGAAGCTAATTACTTATGGCCTCACAATTCAAGTACAGACATTTCCTCTGCATGTAGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAAAAATTTGTCAAGAGAAAGAAATGGACTGAATGAACAGAGCCCTTCAGTTGGTCAAGGTACGTCTTAA

Protein sequence

MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSMPIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS

Homology

[Close]

BLAST of Cp4.1LG06g02350.1 vs. NCBI nr
Match: XP_023536404.1 (uncharacterized protein LOC111797587 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 431 bits (1109), Expect = 4.57e-152
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM
Sbjct: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV
Sbjct: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY
Sbjct: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227
           GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS
Sbjct: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227

[Close]

BLAST of Cp4.1LG06g02350.1 vs. NCBI nr
Match: XP_022935804.1 (uncharacterized protein LOC111442603 [Cucurbita moschata])

HSP 1 Score: 415 bits (1066), Expect = 1.64e-145
Identity = 219/227 (96.48%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI LR LS TSRIRLLKE PSFGPNSCLPLLGSRRA+IACSMKAKMAGFMDSNSM
Sbjct: 1   MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PI+IENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFF VSSLSDFV
Sbjct: 61  PIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFGVSSLSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSE+SSFKKQLYGLGSFFVLVKLITY
Sbjct: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227
           GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS
Sbjct: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227

[Close]

BLAST of Cp4.1LG06g02350.1 vs. NCBI nr
Match: KAG7024327.1 (hypothetical protein SDJN02_13141 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 407 bits (1047), Expect = 1.29e-142
Identity = 217/227 (95.59%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI LR LS TSRIRLLKE PSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM
Sbjct: 1   MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFF VSSLSDFV
Sbjct: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFGVSSLSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSE+SSFKK LYGLGSFFVLVKLITY
Sbjct: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKLLYGLGSFFVLVKLITY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227
           GLTIQVQTFPLHVANGGLMQVLWLWKNLSRE N L+EQSPSVGQGTS
Sbjct: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRETNRLDEQSPSVGQGTS 227

[Close]

BLAST of Cp4.1LG06g02350.1 vs. NCBI nr
Match: XP_022977102.1 (uncharacterized protein LOC111477269 [Cucurbita maxima])

HSP 1 Score: 401 bits (1030), Expect = 5.03e-140
Identity = 212/227 (93.39%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI L S+S TSRIRLLKE PSFGPNSCL LLGSRR++IACSMKAKMAGFMDSNSM
Sbjct: 1   MALPASIPLPSVSPTSRIRLLKEKPSFGPNSCLLLLGSRRSTIACSMKAKMAGFMDSNSM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV
Sbjct: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSE+SSFKK+LYGLGSFFVL KLITY
Sbjct: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKKLYGLGSFFVLAKLITY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227
           GLTIQVQTFPLHVANGGLMQVLWLWKNLSRE N L+EQSPSVG+GTS
Sbjct: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRETNRLDEQSPSVGEGTS 227

[Close]

BLAST of Cp4.1LG06g02350.1 vs. NCBI nr
Match: XP_038900238.1 (uncharacterized protein LOC120087328 [Benincasa hispida])

HSP 1 Score: 343 bits (880), Expect = 3.57e-117
Identity = 188/229 (82.10%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI L SLS TSRI L KE PSF  NSCL L GSR+A++A SMK KMA FMDSNSM
Sbjct: 1   MALPASISLPSLSPTSRIILFKEKPSF--NSCLLLYGSRQATLATSMKVKMARFMDSNSM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PI IE+LKEKMQEV+PEPVK FPWK+AEKILVERLLFMGKET+KWS+LLFFV+SS SDFV
Sbjct: 61  PIEIESLKEKMQEVVPEPVKIFPWKEAEKILVERLLFMGKETLKWSLLLFFVLSSFSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFG--NSEESSFKKQLYGLGSFFVLVKLI 180
           ASIV+N+ELLIPIGLF GVLLT+LLKEISQEVFG  NSEES FKKQLYGLGSFFVLVKLI
Sbjct: 121 ASIVRNEELLIPIGLFIGVLLTDLLKEISQEVFGKSNSEESIFKKQLYGLGSFFVLVKLI 180

Query: 181 TYGLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227
            YG  IQ Q FPLHVANGGLMQVLWLW+NLSRERN  NEQSP VGQGTS
Sbjct: 181 AYGFVIQAQAFPLHVANGGLMQVLWLWRNLSRERNRPNEQSPFVGQGTS 227

[Close]

BLAST of Cp4.1LG06g02350.1 vs. ExPASy TrEMBL
Match: A0A6J1F6G5 (uncharacterized protein LOC111442603 OS=Cucurbita moschata OX=3662 GN=LOC111442603 PE=4 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 7.94e-146
Identity = 219/227 (96.48%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI LR LS TSRIRLLKE PSFGPNSCLPLLGSRRA+IACSMKAKMAGFMDSNSM
Sbjct: 1   MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PI+IENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFF VSSLSDFV
Sbjct: 61  PIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFGVSSLSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSE+SSFKKQLYGLGSFFVLVKLITY
Sbjct: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227
           GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS
Sbjct: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227

[Close]

BLAST of Cp4.1LG06g02350.1 vs. ExPASy TrEMBL
Match: A0A6J1IHI1 (uncharacterized protein LOC111477269 OS=Cucurbita maxima OX=3661 GN=LOC111477269 PE=4 SV=1)

HSP 1 Score: 401 bits (1030), Expect = 2.44e-140
Identity = 212/227 (93.39%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI L S+S TSRIRLLKE PSFGPNSCL LLGSRR++IACSMKAKMAGFMDSNSM
Sbjct: 1   MALPASIPLPSVSPTSRIRLLKEKPSFGPNSCLLLLGSRRSTIACSMKAKMAGFMDSNSM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV
Sbjct: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSE+SSFKK+LYGLGSFFVL KLITY
Sbjct: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKKLYGLGSFFVLAKLITY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227
           GLTIQVQTFPLHVANGGLMQVLWLWKNLSRE N L+EQSPSVG+GTS
Sbjct: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRETNRLDEQSPSVGEGTS 227

[Close]

BLAST of Cp4.1LG06g02350.1 vs. ExPASy TrEMBL
Match: A0A5D3D973 (Putative Embryo defective 1273 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002370 PE=4 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.03e-113
Identity = 178/227 (78.41%), Postives = 195/227 (85.90%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI L SLS TSRI L K   +   NSC PL G RRA++  S+K KMA FMDSN M
Sbjct: 1   MALPASISLPSLSSTSRIILFKGKTTL--NSCFPLNGGRRATLTSSVKVKMARFMDSNFM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PI IENLKEKMQ+V+PEPVK FPWK+AEKILVERL+FMGKET+KWS+LLFFV+SS SDFV
Sbjct: 61  PIEIENLKEKMQKVVPEPVKIFPWKEAEKILVERLVFMGKETLKWSLLLFFVLSSFSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIV+NQELLIPIGLF GVLLT+LLKEISQEVFGNSEESSFKKQLYG+GSFF+LVKLI Y
Sbjct: 121 ASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGIGSFFILVKLIVY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227
           G  IQ Q FPLHVANGGLMQVLWLW+NL +ERN  NEQSP VGQGTS
Sbjct: 181 GFAIQAQLFPLHVANGGLMQVLWLWRNLPKERNQPNEQSPFVGQGTS 225

[Close]

BLAST of Cp4.1LG06g02350.1 vs. ExPASy TrEMBL
Match: A0A1S3BVL5 (uncharacterized protein LOC103493634 OS=Cucumis melo OX=3656 GN=LOC103493634 PE=4 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.03e-113
Identity = 178/227 (78.41%), Postives = 195/227 (85.90%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI L SLS TSRI L K   +   NSC PL G RRA++  S+K KMA FMDSN M
Sbjct: 1   MALPASISLPSLSSTSRIILFKGKTTL--NSCFPLNGGRRATLTSSVKVKMARFMDSNFM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PI IENLKEKMQ+V+PEPVK FPWK+AEKILVERL+FMGKET+KWS+LLFFV+SS SDFV
Sbjct: 61  PIEIENLKEKMQKVVPEPVKIFPWKEAEKILVERLVFMGKETLKWSLLLFFVLSSFSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIV+NQELLIPIGLF GVLLT+LLKEISQEVFGNSEESSFKKQLYG+GSFF+LVKLI Y
Sbjct: 121 ASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGIGSFFILVKLIVY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 227
           G  IQ Q FPLHVANGGLMQVLWLW+NL +ERN  NEQSP VGQGTS
Sbjct: 181 GFAIQAQLFPLHVANGGLMQVLWLWRNLPKERNQPNEQSPFVGQGTS 225

[Close]

BLAST of Cp4.1LG06g02350.1 vs. ExPASy TrEMBL
Match: A0A5A7VDP4 (Putative Embryo defective 1273 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001910 PE=4 SV=1)

HSP 1 Score: 330 bits (847), Expect = 2.42e-112
Identity = 176/225 (78.22%), Postives = 193/225 (85.78%), Query Frame = 0


Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI L SLS TSRI L K   +   NSC PL G RRA++  S+K KMA FMDSN M
Sbjct: 1   MALPASISLPSLSSTSRIILFKGKTTL--NSCFPLNGGRRATLTSSVKVKMARFMDSNFM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PI IENLKEKMQ+V+PEPVK FPWK+AEKILVERL+FMGKET+KWS+LLFFV+SS SDFV
Sbjct: 61  PIEIENLKEKMQKVVPEPVKIFPWKEAEKILVERLVFMGKETLKWSLLLFFVLSSFSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIV+NQELLIPIGLF GVLLT+LLKEISQEVFGNSEESSFKKQLYG+GSFF+LVKLI Y
Sbjct: 121 ASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGIGSFFILVKLIVY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQG 225
           G  IQ Q FPLHVANGGLMQVLWLW+NL +ERN  NEQSP VGQG
Sbjct: 181 GFAIQAQLFPLHVANGGLMQVLWLWRNLPKERNQPNEQSPFVGQG 223

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g02350.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG06g02350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536404.1	4.57e-152	100.00	uncharacterized protein LOC111797587 [Cucurbita pepo subsp. pepo]	[more]
XP_022935804.1	1.64e-145	96.48	uncharacterized protein LOC111442603 [Cucurbita moschata]	[more]
KAG7024327.1	1.29e-142	95.59	hypothetical protein SDJN02_13141 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022977102.1	5.03e-140	93.39	uncharacterized protein LOC111477269 [Cucurbita maxima]	[more]
XP_038900238.1	3.57e-117	82.10	uncharacterized protein LOC120087328 [Benincasa hispida]	[more]

BLAST of Cp4.1LG06g02350.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6G5	7.94e-146	96.48	uncharacterized protein LOC111442603 OS=Cucurbita moschata OX=3662 GN=LOC1114426...	[more]
A0A6J1IHI1	2.44e-140	93.39	uncharacterized protein LOC111477269 OS=Cucurbita maxima OX=3661 GN=LOC111477269...	[more]
A0A5D3D973	1.03e-113	78.41	Putative Embryo defective 1273 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BVL5	1.03e-113	78.41	uncharacterized protein LOC103493634 OS=Cucumis melo OX=3656 GN=LOC103493634 PE=...	[more]
A0A5A7VDP4	2.42e-112	78.22	Putative Embryo defective 1273 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Cp4.1LG06g02350.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36000:SF3	PROTEIN, PUTATIVE-RELATED	coord: 1..223
None	No IPR available	PANTHER	PTHR36000	DEFECTIVE 1273 PROTEIN, PUTATIVE-RELATED	coord: 1..223

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG06g02350	Cp4.1LG06g02350	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g02350.1:three_prime_utr:001	Cp4.1LG06g02350.1:three_prime_utr:001	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g02350.1:exon:003	Cp4.1LG06g02350.1:exon:003	exon
Cp4.1LG06g02350.1:exon:002	Cp4.1LG06g02350.1:exon:002	exon
Cp4.1LG06g02350.1:exon:001	Cp4.1LG06g02350.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g02350.1:cds:001	Cp4.1LG06g02350.1:cds:001	CDS
Cp4.1LG06g02350.1:cds:002	Cp4.1LG06g02350.1:cds:002	CDS
Cp4.1LG06g02350.1:cds:003	Cp4.1LG06g02350.1:cds:003	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g02350.1:five_prime_utr:001	Cp4.1LG06g02350.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g02350.1	Cp4.1LG06g02350.1-protein	polypeptide