CsGy6G002080 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGCTATCTTCTCCATCAAACTCATTAGTGTTTTTGTTCAGTAAACAGCAGCAACAACAATGGAAGCTATTCAAGCTTGGGTTTCAGAACACAAACTCACCACCATTGGTACTTTATTTCCCATTTCCCAATCTTTTTTCTTTACTCTCTTCCTAAATCTAATCACTTTGTTTTTGGGTTATACATTATAGGAGCTCTGTGGGCATCTGGGATTGGAGCATCGCTGGCCTATACCCGATCAAGAACTCCCCTCAAGCCAAGTCTCCGCCTTATTCATGCCAGGTTTAATTCCTCAAACTACTCTTCTCTTCTCTACATTTAGTATTGTGCAAAATAAAATAGTCATCATAGTGTATGTCCCCATATATCCCATGAGTATAGAGTAAATAGTCGTAGTGTAACTATTTCCCATTCTCTTTTTCTTATTCAAATTGAGAATGAAATATTAATTTGGTTTTGTTTGTAATTAGGATGCATGCTCAGGCATTGACCTTAGCGGTTCTTTCCGGCGCGGCCGTCTACCACTACTACGACAACAAAATTGGGAGAGACCGATCTGAAGCTCCTCCGGTTTCAGGGGGAGGGAAATGAAAGAATGGATAAGCGGAGAGTGGTATTGCTCTAAAGGAGGGATGAAGGATGAATCATTTTGTGTAAATGAAATTAAGGATGTTGATGAAAGATTATTAAGTTTGAATTAATGCATCGTCTGTAGTCTAAGTTCTAAAGCTTGGTTACTCTGAATTTTTCCAACTCTTAATTAAGTAGCATATATTTAACAGCCCTAAATTTCTAATACCACCGTGGCACTCTTGTTGGTTCGACACAATGATTTCACACTTCATTACCATTTTGCTCCTTGAAATAAATTGAGATGGATAGTAGAATTTGATAATAGCTAGTCTTTCTCTCCTTTACTTTTTTCAAACAACACTTTTGTCTCCTAAAGTAGAAATTGTTTGATCTTGTAGATAAGGTGTAGTGTTAGTGTCTAAAACTGACTGACAATTACTTATAAAACCCATTCACTATTATTTAAATGACAATCTTTCAAGGCAATGGTATTA ATTGCTATCTTCTCCATCAAACTCATTAGTGTTTTTGTTCAGTAAACAGCAGCAACAACAATGGAAGCTATTCAAGCTTGGGTTTCAGAACACAAACTCACCACCATTGGAGCTCTGTGGGCATCTGGGATTGGAGCATCGCTGGCCTATACCCGATCAAGAACTCCCCTCAAGCCAAGTCTCCGCCTTATTCATGCCAGGATGCATGCTCAGGCATTGACCTTAGCGGTTCTTTCCGGCGCGGCCGTCTACCACTACTACGACAACAAAATTGGGAGAGACCGATCTGAAGCTCCTCCGGTTTCAGGGGGAGGGAAATGAAAGAATGGATAAGCGGAGAGTGGTATTGCTCTAAAGGAGGGATGAAGGATGAATCATTTTGTGTAAATGAAATTAAGGATGTTGATGAAAGATTATTAAGTTTGAATTAATGCATCGTCTGTAGTCTAAGTTCTAAAGCTTGGTTACTCTGAATTTTTCCAACTCTTAATTAAGTAGCATATATTTAACAGCCCTAAATTTCTAATACCACCGTGGCACTCTTGTTGGTTCGACACAATGATTTCACACTTCATTACCATTTTGCTCCTTGAAATAAATTGAGATGGATAGTAGAATTTGATAATAGCTAGTCTTTCTCTCCTTTACTTTTTTCAAACAACACTTTTGTCTCCTAAAGTAGAAATTGTTTGATCTTGTAGATAAGGTGTAGTGTTAGTGTCTAAAACTGACTGACAATTACTTATAAAACCCATTCACTATTATTTAAATGACAATCTTTCAAGGCAATGGTATTA ATGGAAGCTATTCAAGCTTGGGTTTCAGAACACAAACTCACCACCATTGGAGCTCTGTGGGCATCTGGGATTGGAGCATCGCTGGCCTATACCCGATCAAGAACTCCCCTCAAGCCAAGTCTCCGCCTTATTCATGCCAGGATGCATGCTCAGGCATTGACCTTAGCGGTTCTTTCCGGCGCGGCCGTCTACCACTACTACGACAACAAAATTGGGAGAGACCGATCTGAAGCTCCTCCGGTTTCAGGGGGAGGGAAATGA MEAIQAWVSEHKLTTIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKIGRDRSEAPPVSGGGK* Homology
BLAST of CsGy6G002080 vs. NCBI nr
Match: XP_004138401.1 (uncharacterized protein LOC101218681 [Cucumis sativus] >KGN45820.1 hypothetical protein Csa_005574 [Cucumis sativus]) HSP 1 Score: 174 bits (442), Expect = 6.39e-55 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CsGy6G002080 vs. NCBI nr
Match: KAA0052029.1 (respiratory supercomplex factor 2-like protein [Cucumis melo var. makuwa] >TYK04531.1 respiratory supercomplex factor 2-like protein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 167 bits (422), Expect = 7.21e-52 Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of CsGy6G002080 vs. NCBI nr
Match: XP_038886475.1 (uncharacterized protein LOC120076661 [Benincasa hispida]) HSP 1 Score: 146 bits (368), Expect = 1.21e-43 Identity = 73/84 (86.90%), Postives = 76/84 (90.48%), Query Frame = 0
BLAST of CsGy6G002080 vs. NCBI nr
Match: KAG6578469.1 (hypothetical protein SDJN03_22917, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 143 bits (361), Expect = 1.55e-42 Identity = 71/79 (89.87%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of CsGy6G002080 vs. NCBI nr
Match: KAG7016034.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 143 bits (361), Expect = 3.43e-39 Identity = 71/79 (89.87%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of CsGy6G002080 vs. ExPASy TrEMBL
Match: A0A0A0K7T4 (HIG1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013920 PE=4 SV=1) HSP 1 Score: 174 bits (442), Expect = 3.09e-55 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CsGy6G002080 vs. ExPASy TrEMBL
Match: A0A5A7UEZ1 (Respiratory supercomplex factor 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001530 PE=4 SV=1) HSP 1 Score: 167 bits (422), Expect = 3.49e-52 Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of CsGy6G002080 vs. ExPASy TrEMBL
Match: A0A7J7I509 (HIG1 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_000926 PE=4 SV=1) HSP 1 Score: 132 bits (332), Expect = 4.33e-38 Identity = 61/72 (84.72%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of CsGy6G002080 vs. ExPASy TrEMBL
Match: A0A5J5AU49 (HIG1 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_031517 PE=4 SV=1) HSP 1 Score: 130 bits (327), Expect = 9.39e-38 Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 0
BLAST of CsGy6G002080 vs. ExPASy TrEMBL
Match: A0A6A6N2Z1 (HIG1 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_014009 PE=4 SV=1) HSP 1 Score: 127 bits (320), Expect = 1.34e-36 Identity = 59/78 (75.64%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of CsGy6G002080 vs. TAIR 10
Match: AT3G05550.1 (Hypoxia-responsive family protein ) HSP 1 Score: 90.5 bits (223), Expect = 7.2e-19 Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of CsGy6G002080 vs. TAIR 10
Match: AT5G27760.1 (Hypoxia-responsive family protein ) HSP 1 Score: 89.7 bits (221), Expect = 1.2e-18 Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|