Homology
BLAST of Cp4.1LG03g08470 vs. ExPASy Swiss-Prot
Match:
Q8RWS8 (Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana OX=3702 GN=EMB2654 PE=2 SV=1)
HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 520/782 (66.50%), Postives = 646/782 (82.61%), Query Frame = 0
Query: 32 SKNESAFEETKQVLVDYDNGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQ 91
+K AF+E K V V+YD G+HEV + GLRK DIPRRY++RV +RFQKDW+V+EVV
Sbjct: 24 TKASDAFQEKKSVSVNYDRGEHEVSVNIGGLRKADIPRRYRIRVENDRFQKDWSVSEVVD 83
Query: 92 RILKLQRHGDVEALLNCWVGRFARKNYPALMKELTQNGSIEHCVQVFDWMKNQKNYCARN 151
R++ L R +V+ +LN WVGRFARKN+P L++EL++ G IE CV VF WMK QKNYCARN
Sbjct: 84 RLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARN 143
Query: 152 DIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNIMED 211
DIYNMMIRLHARHN +DQARGLFFEMQKW CKPDAETY++LINAHGRAGQWRWAMN+M+D
Sbjct: 144 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 203
Query: 212 MLRAAIPPSRSTFNNLINACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQ 271
MLRAAI PSRST+NNLINACGSSGNWREAL VCKKMTDNGVGPDLVTHNIVLSAYKSG Q
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 272 YSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRAECRPDVVTF 331
YSKALSYFELMKG +RPDTTT NI+I+CL K+ Q QA+++F+SMREKRAECRPDVVTF
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 332 TSIIHLYSVCGQIEDCKAVFSTMLGEGIKPTIVSYNALISAYASHGMDKEASTVFDEMKR 391
TSI+HLYSV G+IE+C+AVF M+ EG+KP IVSYNAL+ AYA HGM A +V ++K+
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 392 SGFRPDVVSYTSLLSTFGRSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQ 451
+G PDVVSYT LL+++GRS+QP +A+EVF MM++ + KPN+V+YNALIDAYGSNG+LA+
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 452 AVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIG 511
AV+I R+MEQDGI PNVVS+CTLLAAC R +KVNVD VLSAA+ RGI LNT AYNSAIG
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 512 SYMNIGEYEKAVDLYRSMKNKNTKPDSVTYTILISSCCRMSKYDEAIHFFKEMVDLKIPL 571
SY+N E EKA+ LY+SM+ K K DSVT+TILIS CRMSKY EAI + KEM DL IPL
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 563
Query: 572 SEEIYSSMICAYSKQGQLVKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLY 631
++E+YSS++CAYSKQGQ+ +AE++FN +K +GC PD++ YT+M++AY+ +E W KAC L+
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Query: 632 HEMETNNIQLDSIACSALMKAYNKGNQASNVLTLAEIMKEKGIPFNDANFFEMLSACSTL 691
EME N I+ DSIACSALM+A+NKG Q SNV L ++M+EK IPF A FFE+ SAC+TL
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTL 683
Query: 692 RDWRKATDIIKLMEPSLHLVSVGTINHLLHFLGKSGKMEIMMKLFYRFMALGSSVNISTY 751
++W++A D+I++M+P L +S+G N +LH GKSGK+E MMKLFY+ +A G +N+ TY
Sbjct: 684 QEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTY 743
Query: 752 SILLKNLLSFGNWRKYIEVLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERVES 811
+ILL++LL+ GNWRKYIEVL+WM AGIQPSN MY DI+ F + G E +I++++ES
Sbjct: 744 AILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLES 803
Query: 812 LK 814
L+
Sbjct: 804 LR 805
BLAST of Cp4.1LG03g08470 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 255.8 bits (652), Expect = 1.7e-66
Identity = 160/631 (25.36%), Postives = 308/631 (48.81%), Query Frame = 0
Query: 161 HARHNRIDQARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPS 220
H + + +A F + + ++ D +I+ G+ G+ A N+ +
Sbjct: 148 HKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLD 207
Query: 221 RSTFNNLINACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAY-KSGAQYSKALSYF 280
++ +LI+A +SG +REA+ V KKM ++G P L+T+N++L+ + K G ++K S
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 281 ELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYS 340
E MK I PD T N +I C + + +A ++F M K A D VT+ +++ +Y
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM--KAAGFSYDKVTYNALLDVYG 327
Query: 341 VCGQIEDCKAVFSTMLGEGIKPTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVV 400
+ ++ V + M+ G P+IV+YN+LISAYA GM EA + ++M G +PDV
Sbjct: 328 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 387
Query: 401 SYTSLLSTFGRSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREM 460
+YT+LLS F R+ + A +F+ M+ CKPN+ ++NA I YG+ G + + I E+
Sbjct: 388 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 447
Query: 461 EQDGIHPNVVSICTLLAACGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEY 520
G+ P++V+ TLLA G+ G V V + G +N+ I +Y G +
Sbjct: 448 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 507
Query: 521 EKAVDLYRSMKNKNTKPDSVTYTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSM 580
E+A+ +YR M + PD TY ++++ R ++++ EM D + +E Y S+
Sbjct: 508 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 567
Query: 581 ICAYSKQGQLVKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNI 640
+ AY+ ++ +L + P V ++ S + +A + E++
Sbjct: 568 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 627
Query: 641 QLDSIACSALMKAYNKGNQASNVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATD 700
D ++++ Y + + + + MKE+G + A + ++ S D+ K+ +
Sbjct: 628 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 687
Query: 701 IIKLMEPSLHLVSVGTINHLLHFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLL 760
I++ + + + N +++ ++ +M ++F G ++ TY+ + +
Sbjct: 688 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 747
Query: 761 SFGNWRKYIEVLQWMDDAGIQPSNAMYNDIL 791
+ + + I V+++M G +P+ YN I+
Sbjct: 748 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
BLAST of Cp4.1LG03g08470 vs. ExPASy Swiss-Prot
Match:
Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)
HSP 1 Score: 240.7 bits (613), Expect = 5.6e-62
Identity = 163/598 (27.26%), Postives = 279/598 (46.66%), Query Frame = 0
Query: 75 VGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPALMKELTQNGSIEHC 134
V E+ + + V ++ ++ L G + L+ + + + ++ + KE G +
Sbjct: 65 VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 124
Query: 135 VQVFDWMKNQKNYCARND-IYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDAETYNSLI 194
+++F +M+ Q +C N+ IY +MI L R +D+ +F EM +Y +LI
Sbjct: 125 LRLFKYMQRQ-IWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 184
Query: 195 NAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSG-NWREALRVCKKMTDNGV 254
NA+GR G++ ++ +++ M I PS T+N +INAC G +W L + +M G+
Sbjct: 185 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 244
Query: 255 GPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIE 314
PD+VT+N +LSA +A F M I PD TT Y +E
Sbjct: 245 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT-------------YSHLVE 304
Query: 315 IFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIKPTIVSYNALISA 374
F +R L VC + M G P I SYN L+ A
Sbjct: 305 TFGKLR-----------------RLEKVCD-------LLGEMASGGSLPDITSYNVLLEA 364
Query: 375 YASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREVFDMMKRNKCKPN 434
YA G KEA VF +M+ +G P+ +Y+ LL+ FG+S + R++F MK + P+
Sbjct: 365 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 424
Query: 435 LVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNVDAVLS 494
+YN LI+ +G GY + V + +M ++ I P++ + ++ ACG+ G + +L
Sbjct: 425 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 484
Query: 495 AAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVTYTILISSCCRMS 554
I ++ AY I ++ YE+A+ + +M + P T+ L+ S R
Sbjct: 485 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 544
Query: 555 KYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLKGSGCCPDLVTYT 614
E+ +VD IP + + +++ I AY + G+ +A + ++ S C PD T
Sbjct: 545 LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 604
Query: 615 AMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKA-YNKGNQASNVLTLAEIM 670
A+++ YS ++ + EM+ ++I L SI C +M A Y K + +V L E M
Sbjct: 605 AVLSVYSFARLVDECREQFEEMKASDI-LPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
BLAST of Cp4.1LG03g08470 vs. ExPASy Swiss-Prot
Match:
Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 3.8e-58
Identity = 174/739 (23.55%), Postives = 327/739 (44.25%), Query Frame = 0
Query: 85 TVTEVVQRILKLQRHGDVEALLNCWVGRFARKN---YPALMKELTQNGSIEHCVQVFDWM 144
T++ ++ ++K + G L N V R + Y +++ L + + ++ M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 145 KNQKNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQKWRCKPDAETYNSLINAHGRAG 204
+ C N + YN++I + ++ +A G+ ++ KPD TY +L+ +
Sbjct: 254 --EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 313
Query: 205 QWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREALRVCKKMTDNGVGPDLVTHN 264
++ + +M++ML PS + ++L+ G EAL + K++ D GV P+L +N
Sbjct: 314 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 373
Query: 265 IVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREK 324
++ + G ++ +A F+ M +RP+ T +I+I + + A+ M +
Sbjct: 374 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD- 433
Query: 325 RAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIKPTIVSYNALISAYASHGMDK 384
+ V + S+I+ + G I + + M+ + ++PT+V+Y +L+ Y S G
Sbjct: 434 -TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 493
Query: 385 EASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREVFDMMKRNKCKPNLVSYNALI 444
+A ++ EM G P + ++T+LLS R+ A ++F+ M KPN V+YN +I
Sbjct: 494 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 553
Query: 445 DAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNVDAVLSAAELRGIR 504
+ Y G +++A + L+EM + GI P+ S L+ GQ +
Sbjct: 554 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 613
Query: 505 LNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVTYTILISSCCRMSKYDEAIHF 564
LN I Y + + G+ E+A+ + + M + D V Y +LI +
Sbjct: 614 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 673
Query: 565 FKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLKGSGCCPDLVTYTAMINAYST 624
KEM D + + IY+SMI A SK G +A +++ + GC P+ VTYTA+IN
Sbjct: 674 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 733
Query: 625 TETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS-----NVLTLAEIMKEKGIP 684
+A + CS + + NQ + ++LT E+ +K +
Sbjct: 734 AGFVNEA---------------EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 793
Query: 685 FNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLLHFLGKSGKMEIMMKL 744
++A I+K + L + T N L+ + G++E +L
Sbjct: 794 LHNA--------------------ILKGL-----LANTATYNMLIRGFCRQGRIEEASEL 853
Query: 745 FYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQPSNAMYNDILYFAQN 804
R + G S + TY+ ++ L + +K IE+ M + GI+P YN +++
Sbjct: 854 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC-- 886
Query: 805 CGGAECAAIIKERVESLKR 815
C E + R E L++
Sbjct: 914 CVAGEMGKATELRNEMLRQ 886
BLAST of Cp4.1LG03g08470 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 225.7 bits (574), Expect = 1.9e-57
Identity = 148/607 (24.38%), Postives = 281/607 (46.29%), Query Frame = 0
Query: 184 PDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREALR- 243
PD TY LI RAG+ + ++++ F L+ + +A+
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 244 VCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELM---KGTNIRPDTTTLNIVIH 303
V ++MT+ G P++ ++NI+L + +AL +M +G PD + VI+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 304 CLIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGI 363
K +A + M ++ PDVVT+ SII ++ V +TM+ G+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDR--GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 264
Query: 364 KPTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRARE 423
P ++YN+++ Y S G KEA +M+ G PDVV+Y+ L+ ++ + AR+
Sbjct: 265 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 324
Query: 424 VFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACG 483
+FD M + KP + +Y L+ Y + G L + +L M ++GIHP+ L+ A
Sbjct: 325 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 384
Query: 484 RFGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSV 543
+ G+ V S +G+ N + Y + IG G E A+ + M ++ P ++
Sbjct: 385 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 444
Query: 544 TYTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSL 603
Y LI C +K++ A EM+D I L+ ++S+I ++ K+G+++++E LF +
Sbjct: 445 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 504
Query: 604 KGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQA 663
G P+++TY +IN Y ++A L M + ++ +++ S L+ Y K ++
Sbjct: 505 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 564
Query: 664 SNVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHL 723
+ L L + M+ G+ + + +L R A ++ + S + + T N +
Sbjct: 565 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 624
Query: 724 LHFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGI 783
LH L K+ + +++F + + T++I++ LL G + ++ G+
Sbjct: 625 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 684
Query: 784 QPSNAMY 787
P+ Y
Sbjct: 685 VPNYWTY 689
BLAST of Cp4.1LG03g08470 vs. NCBI nr
Match:
XP_023526155.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1651 bits (4276), Expect = 0.0
Identity = 814/814 (100.00%), Postives = 814/814 (100.00%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 814
PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825
BLAST of Cp4.1LG03g08470 vs. NCBI nr
Match:
XP_023526156.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1650 bits (4273), Expect = 0.0
Identity = 813/814 (99.88%), Postives = 814/814 (100.00%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIF+SMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 814
PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825
BLAST of Cp4.1LG03g08470 vs. NCBI nr
Match:
XP_023526157.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1642 bits (4253), Expect = 0.0
Identity = 809/809 (100.00%), Postives = 809/809 (100.00%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERV 809
PSNAMYNDILYFAQNCGGAECAAIIKERV
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERV 820
BLAST of Cp4.1LG03g08470 vs. NCBI nr
Match:
XP_022934373.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1638 bits (4241), Expect = 0.0
Identity = 807/814 (99.14%), Postives = 810/814 (99.51%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQR+GDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRYGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHCVQVF WMKNQKNYCARNDIYNMMIRLH RHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCVQVFVWMKNQKNYCARNDIYNMMIRLHTRHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIF+SMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
P IVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAV SAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVFSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRF+ALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 814
PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825
BLAST of Cp4.1LG03g08470 vs. NCBI nr
Match:
KAG6580916.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1632 bits (4227), Expect = 0.0
Identity = 804/814 (98.77%), Postives = 808/814 (99.26%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PSH HKFSYPADLTGRS DST P TLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSHQHKFSYPADLTGRSSDSTLPTTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHC+QVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCIQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIF+SMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
P IVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAV+SAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVISAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLY EMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYREMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRF+ALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 814
PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825
BLAST of Cp4.1LG03g08470 vs. ExPASy TrEMBL
Match:
A0A6J1F7H2 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441562 PE=4 SV=1)
HSP 1 Score: 1638 bits (4241), Expect = 0.0
Identity = 807/814 (99.14%), Postives = 810/814 (99.51%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQR+GDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRYGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHCVQVF WMKNQKNYCARNDIYNMMIRLH RHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCVQVFVWMKNQKNYCARNDIYNMMIRLHTRHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIF+SMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
P IVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAV SAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVFSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRF+ALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 814
PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825
BLAST of Cp4.1LG03g08470 vs. ExPASy TrEMBL
Match:
A0A6J1J042 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482245 PE=4 SV=1)
HSP 1 Score: 1629 bits (4218), Expect = 0.0
Identity = 801/814 (98.40%), Postives = 808/814 (99.26%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PS HHKFSY ADLTGRS+DST PKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSRHHKFSYTADLTGRSLDSTLPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNI+EDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNILEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIF+SMREKRAECRPDVVTFT+IIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFNSMREKRAECRPDVVTFTTIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
P IVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLA+CGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLASCGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKA+DLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAIDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
Y ILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YNILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVL LAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLILAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRF+ALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 814
PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERVESLKR 825
BLAST of Cp4.1LG03g08470 vs. ExPASy TrEMBL
Match:
A0A6J1F2E1 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441562 PE=4 SV=1)
HSP 1 Score: 1629 bits (4218), Expect = 0.0
Identity = 802/809 (99.13%), Postives = 805/809 (99.51%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQR+GDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRYGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHCVQVF WMKNQKNYCARNDIYNMMIRLH RHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCVQVFVWMKNQKNYCARNDIYNMMIRLHTRHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIF+SMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFNSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
P IVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAV SAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVFSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRF+ALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERV 809
PSNAMYNDILYFAQNCGGAECAAIIKERV
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERV 820
BLAST of Cp4.1LG03g08470 vs. ExPASy TrEMBL
Match:
A0A6J1J354 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482245 PE=4 SV=1)
HSP 1 Score: 1620 bits (4195), Expect = 0.0
Identity = 796/809 (98.39%), Postives = 803/809 (99.26%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PS HHKFSY ADLTGRS+DST PKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSRHHKFSYTADLTGRSLDSTLPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNI+EDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNILEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIF+SMREKRAECRPDVVTFT+IIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFNSMREKRAECRPDVVTFTTIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
P IVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLA+CGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLASCGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKA+DLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAIDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
Y ILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YNILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVL LAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLILAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRF+ALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERV 809
PSNAMYNDILYFAQNCGGAECAAIIKERV
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERV 820
BLAST of Cp4.1LG03g08470 vs. ExPASy TrEMBL
Match:
A0A6J1J8H8 (pentatricopeptide repeat-containing protein At2g41720 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482245 PE=4 SV=1)
HSP 1 Score: 1620 bits (4195), Expect = 0.0
Identity = 796/809 (98.39%), Postives = 803/809 (99.26%), Query Frame = 0
Query: 1 PSHHHKFSYPADLTGRSVDSTFPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 60
PS HHKFSY ADLTGRS+DST PKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN
Sbjct: 12 PSRHHKFSYTADLTGRSLDSTLPKTLIICKNSKNESAFEETKQVLVDYDNGKHEVRTLVN 71
Query: 61 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 120
GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA
Sbjct: 72 GLRKLDIPRRYQLRVGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPA 131
Query: 121 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 180
LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW
Sbjct: 132 LMKELTQNGSIEHCVQVFDWMKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKW 191
Query: 181 RCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREA 240
RCKPDAETYNSLINAHGRAGQWRWAMNI+EDMLRAAIPPSRSTFNNLINACGSSGNWREA
Sbjct: 192 RCKPDAETYNSLINAHGRAGQWRWAMNILEDMLRAAIPPSRSTFNNLINACGSSGNWREA 251
Query: 241 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 300
LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC
Sbjct: 252 LRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHC 311
Query: 301 LIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIK 360
LIKVKQYGQAIEIF+SMREKRAECRPDVVTFT+IIHLYSVCGQIEDCKAVFSTMLGEGIK
Sbjct: 312 LIKVKQYGQAIEIFNSMREKRAECRPDVVTFTTIIHLYSVCGQIEDCKAVFSTMLGEGIK 371
Query: 361 PTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 420
P IVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV
Sbjct: 372 PNIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREV 431
Query: 421 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGR 480
FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLA+CGR
Sbjct: 432 FDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLASCGR 491
Query: 481 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVT 540
FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKA+DLYRSMKNKNTKPDSVT
Sbjct: 492 FGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEYEKAIDLYRSMKNKNTKPDSVT 551
Query: 541 YTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 600
Y ILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK
Sbjct: 552 YNILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLK 611
Query: 601 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 660
GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS
Sbjct: 612 GSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS 671
Query: 661 NVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 720
NVL LAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL
Sbjct: 672 NVLILAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLL 731
Query: 721 HFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 780
HFLGKSGKMEIMMKLFYRF+ALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ
Sbjct: 732 HFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQ 791
Query: 781 PSNAMYNDILYFAQNCGGAECAAIIKERV 809
PSNAMYNDILYFAQNCGGAECAAIIKERV
Sbjct: 792 PSNAMYNDILYFAQNCGGAECAAIIKERV 820
BLAST of Cp4.1LG03g08470 vs. TAIR 10
Match:
AT2G41720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 520/782 (66.50%), Postives = 646/782 (82.61%), Query Frame = 0
Query: 32 SKNESAFEETKQVLVDYDNGKHEVRTLVNGLRKLDIPRRYQLRVGGERFQKDWTVTEVVQ 91
+K AF+E K V V+YD G+HEV + GLRK DIPRRY++RV +RFQKDW+V+EVV
Sbjct: 24 TKASDAFQEKKSVSVNYDRGEHEVSVNIGGLRKADIPRRYRIRVENDRFQKDWSVSEVVD 83
Query: 92 RILKLQRHGDVEALLNCWVGRFARKNYPALMKELTQNGSIEHCVQVFDWMKNQKNYCARN 151
R++ L R +V+ +LN WVGRFARKN+P L++EL++ G IE CV VF WMK QKNYCARN
Sbjct: 84 RLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARN 143
Query: 152 DIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNIMED 211
DIYNMMIRLHARHN +DQARGLFFEMQKW CKPDAETY++LINAHGRAGQWRWAMN+M+D
Sbjct: 144 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 203
Query: 212 MLRAAIPPSRSTFNNLINACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQ 271
MLRAAI PSRST+NNLINACGSSGNWREAL VCKKMTDNGVGPDLVTHNIVLSAYKSG Q
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 272 YSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRAECRPDVVTF 331
YSKALSYFELMKG +RPDTTT NI+I+CL K+ Q QA+++F+SMREKRAECRPDVVTF
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 332 TSIIHLYSVCGQIEDCKAVFSTMLGEGIKPTIVSYNALISAYASHGMDKEASTVFDEMKR 391
TSI+HLYSV G+IE+C+AVF M+ EG+KP IVSYNAL+ AYA HGM A +V ++K+
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 392 SGFRPDVVSYTSLLSTFGRSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQ 451
+G PDVVSYT LL+++GRS+QP +A+EVF MM++ + KPN+V+YNALIDAYGSNG+LA+
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 452 AVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIG 511
AV+I R+MEQDGI PNVVS+CTLLAAC R +KVNVD VLSAA+ RGI LNT AYNSAIG
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 512 SYMNIGEYEKAVDLYRSMKNKNTKPDSVTYTILISSCCRMSKYDEAIHFFKEMVDLKIPL 571
SY+N E EKA+ LY+SM+ K K DSVT+TILIS CRMSKY EAI + KEM DL IPL
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 563
Query: 572 SEEIYSSMICAYSKQGQLVKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLY 631
++E+YSS++CAYSKQGQ+ +AE++FN +K +GC PD++ YT+M++AY+ +E W KAC L+
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Query: 632 HEMETNNIQLDSIACSALMKAYNKGNQASNVLTLAEIMKEKGIPFNDANFFEMLSACSTL 691
EME N I+ DSIACSALM+A+NKG Q SNV L ++M+EK IPF A FFE+ SAC+TL
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTL 683
Query: 692 RDWRKATDIIKLMEPSLHLVSVGTINHLLHFLGKSGKMEIMMKLFYRFMALGSSVNISTY 751
++W++A D+I++M+P L +S+G N +LH GKSGK+E MMKLFY+ +A G +N+ TY
Sbjct: 684 QEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTY 743
Query: 752 SILLKNLLSFGNWRKYIEVLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERVES 811
+ILL++LL+ GNWRKYIEVL+WM AGIQPSN MY DI+ F + G E +I++++ES
Sbjct: 744 AILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLES 803
Query: 812 LK 814
L+
Sbjct: 804 LR 805
BLAST of Cp4.1LG03g08470 vs. TAIR 10
Match:
AT2G41720.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 963.4 bits (2489), Expect = 1.2e-280
Identity = 455/673 (67.61%), Postives = 562/673 (83.51%), Query Frame = 0
Query: 141 MKNQKNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDAETYNSLINAHGRAG 200
MK QKNYCARNDIYNMMIRLHARHN +DQARGLFFEMQKW CKPDAETY++LINAHGRAG
Sbjct: 1 MKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 60
Query: 201 QWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREALRVCKKMTDNGVGPDLVTHN 260
QWRWAMN+M+DMLRAAI PSRST+NNLINACGSSGNWREAL VCKKMTDNGVGPDLVTHN
Sbjct: 61 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 120
Query: 261 IVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREK 320
IVLSAYKSG QYSKALSYFELMKG +RPDTTT NI+I+CL K+ Q QA+++F+SMREK
Sbjct: 121 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 180
Query: 321 RAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIKPTIVSYNALISAYASHGMDK 380
RAECRPDVVTFTSI+HLYSV G+IE+C+AVF M+ EG+KP IVSYNAL+ AYA HGM
Sbjct: 181 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 240
Query: 381 EASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREVFDMMKRNKCKPNLVSYNALI 440
A +V ++K++G PDVVSYT LL+++GRS+QP +A+EVF MM++ + KPN+V+YNALI
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 441 DAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNVDAVLSAAELRGIR 500
DAYGSNG+LA+AV+I R+MEQDGI PNVVS+CTLLAAC R +KVNVD VLSAA+ RGI
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360
Query: 501 LNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVTYTILISSCCRMSKYDEAIHF 560
LNT AYNSAIGSY+N E EKA+ LY+SM+ K K DSVT+TILIS CRMSKY EAI +
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 420
Query: 561 FKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLKGSGCCPDLVTYTAMINAYST 620
KEM DL IPL++E+YSS++CAYSKQGQ+ +AE++FN +K +GC PD++ YT+M++AY+
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480
Query: 621 TETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQASNVLTLAEIMKEKGIPFNDAN 680
+E W KAC L+ EME N I+ DSIACSALM+A+NKG Q SNV L ++M+EK IPF A
Sbjct: 481 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAV 540
Query: 681 FFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLLHFLGKSGKMEIMMKLFYRFM 740
FFE+ SAC+TL++W++A D+I++M+P L +S+G N +LH GKSGK+E MMKLFY+ +
Sbjct: 541 FFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKII 600
Query: 741 ALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQPSNAMYNDILYFAQNCGGAE 800
A G +N+ TY+ILL++LL+ GNWRKYIEVL+WM AGIQPSN MY DI+ F + G E
Sbjct: 601 ASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIE 660
Query: 801 CAAIIKERVESLK 814
+I++++ ++
Sbjct: 661 FEPLIRQKLGEMR 673
BLAST of Cp4.1LG03g08470 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 255.8 bits (652), Expect = 1.2e-67
Identity = 160/631 (25.36%), Postives = 308/631 (48.81%), Query Frame = 0
Query: 161 HARHNRIDQARGLFFEMQKWRCKPDAETYNSLINAHGRAGQWRWAMNIMEDMLRAAIPPS 220
H + + +A F + + ++ D +I+ G+ G+ A N+ +
Sbjct: 148 HKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLD 207
Query: 221 RSTFNNLINACGSSGNWREALRVCKKMTDNGVGPDLVTHNIVLSAY-KSGAQYSKALSYF 280
++ +LI+A +SG +REA+ V KKM ++G P L+T+N++L+ + K G ++K S
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 281 ELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRAECRPDVVTFTSIIHLYS 340
E MK I PD T N +I C + + +A ++F M K A D VT+ +++ +Y
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM--KAAGFSYDKVTYNALLDVYG 327
Query: 341 VCGQIEDCKAVFSTMLGEGIKPTIVSYNALISAYASHGMDKEASTVFDEMKRSGFRPDVV 400
+ ++ V + M+ G P+IV+YN+LISAYA GM EA + ++M G +PDV
Sbjct: 328 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 387
Query: 401 SYTSLLSTFGRSQQPTRAREVFDMMKRNKCKPNLVSYNALIDAYGSNGYLAQAVDILREM 460
+YT+LLS F R+ + A +F+ M+ CKPN+ ++NA I YG+ G + + I E+
Sbjct: 388 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 447
Query: 461 EQDGIHPNVVSICTLLAACGRFGQKVNVDAVLSAAELRGIRLNTIAYNSAIGSYMNIGEY 520
G+ P++V+ TLLA G+ G V V + G +N+ I +Y G +
Sbjct: 448 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 507
Query: 521 EKAVDLYRSMKNKNTKPDSVTYTILISSCCRMSKYDEAIHFFKEMVDLKIPLSEEIYSSM 580
E+A+ +YR M + PD TY ++++ R ++++ EM D + +E Y S+
Sbjct: 508 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 567
Query: 581 ICAYSKQGQLVKAETLFNSLKGSGCCPDLVTYTAMINAYSTTETWEKACSLYHEMETNNI 640
+ AY+ ++ +L + P V ++ S + +A + E++
Sbjct: 568 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 627
Query: 641 QLDSIACSALMKAYNKGNQASNVLTLAEIMKEKGIPFNDANFFEMLSACSTLRDWRKATD 700
D ++++ Y + + + + MKE+G + A + ++ S D+ K+ +
Sbjct: 628 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 687
Query: 701 IIKLMEPSLHLVSVGTINHLLHFLGKSGKMEIMMKLFYRFMALGSSVNISTYSILLKNLL 760
I++ + + + N +++ ++ +M ++F G ++ TY+ + +
Sbjct: 688 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 747
Query: 761 SFGNWRKYIEVLQWMDDAGIQPSNAMYNDIL 791
+ + + I V+++M G +P+ YN I+
Sbjct: 748 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
BLAST of Cp4.1LG03g08470 vs. TAIR 10
Match:
AT1G74850.1 (plastid transcriptionally active 2 )
HSP 1 Score: 240.7 bits (613), Expect = 4.0e-63
Identity = 163/598 (27.26%), Postives = 279/598 (46.66%), Query Frame = 0
Query: 75 VGGERFQKDWTVTEVVQRILKLQRHGDVEALLNCWVGRFARKNYPALMKELTQNGSIEHC 134
V E+ + + V ++ ++ L G + L+ + + + ++ + KE G +
Sbjct: 65 VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 124
Query: 135 VQVFDWMKNQKNYCARND-IYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDAETYNSLI 194
+++F +M+ Q +C N+ IY +MI L R +D+ +F EM +Y +LI
Sbjct: 125 LRLFKYMQRQ-IWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 184
Query: 195 NAHGRAGQWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSG-NWREALRVCKKMTDNGV 254
NA+GR G++ ++ +++ M I PS T+N +INAC G +W L + +M G+
Sbjct: 185 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 244
Query: 255 GPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIE 314
PD+VT+N +LSA +A F M I PD TT Y +E
Sbjct: 245 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT-------------YSHLVE 304
Query: 315 IFSSMREKRAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIKPTIVSYNALISA 374
F +R L VC + M G P I SYN L+ A
Sbjct: 305 TFGKLR-----------------RLEKVCD-------LLGEMASGGSLPDITSYNVLLEA 364
Query: 375 YASHGMDKEASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREVFDMMKRNKCKPN 434
YA G KEA VF +M+ +G P+ +Y+ LL+ FG+S + R++F MK + P+
Sbjct: 365 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 424
Query: 435 LVSYNALIDAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNVDAVLS 494
+YN LI+ +G GY + V + +M ++ I P++ + ++ ACG+ G + +L
Sbjct: 425 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 484
Query: 495 AAELRGIRLNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVTYTILISSCCRMS 554
I ++ AY I ++ YE+A+ + +M + P T+ L+ S R
Sbjct: 485 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 544
Query: 555 KYDEAIHFFKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLKGSGCCPDLVTYT 614
E+ +VD IP + + +++ I AY + G+ +A + ++ S C PD T
Sbjct: 545 LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 604
Query: 615 AMINAYSTTETWEKACSLYHEMETNNIQLDSIACSALMKA-YNKGNQASNVLTLAEIM 670
A+++ YS ++ + EM+ ++I L SI C +M A Y K + +V L E M
Sbjct: 605 AVLSVYSFARLVDECREQFEEMKASDI-LPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
BLAST of Cp4.1LG03g08470 vs. TAIR 10
Match:
AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 228.0 bits (580), Expect = 2.7e-59
Identity = 174/739 (23.55%), Postives = 327/739 (44.25%), Query Frame = 0
Query: 85 TVTEVVQRILKLQRHGDVEALLNCWVGRFARKN---YPALMKELTQNGSIEHCVQVFDWM 144
T++ ++ ++K + G L N V R + Y +++ L + + ++ M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 145 KNQKNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQKWRCKPDAETYNSLINAHGRAG 204
+ C N + YN++I + ++ +A G+ ++ KPD TY +L+ +
Sbjct: 254 --EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 313
Query: 205 QWRWAMNIMEDMLRAAIPPSRSTFNNLINACGSSGNWREALRVCKKMTDNGVGPDLVTHN 264
++ + +M++ML PS + ++L+ G EAL + K++ D GV P+L +N
Sbjct: 314 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 373
Query: 265 IVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREK 324
++ + G ++ +A F+ M +RP+ T +I+I + + A+ M +
Sbjct: 374 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD- 433
Query: 325 RAECRPDVVTFTSIIHLYSVCGQIEDCKAVFSTMLGEGIKPTIVSYNALISAYASHGMDK 384
+ V + S+I+ + G I + + M+ + ++PT+V+Y +L+ Y S G
Sbjct: 434 -TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 493
Query: 385 EASTVFDEMKRSGFRPDVVSYTSLLSTFGRSQQPTRAREVFDMMKRNKCKPNLVSYNALI 444
+A ++ EM G P + ++T+LLS R+ A ++F+ M KPN V+YN +I
Sbjct: 494 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 553
Query: 445 DAYGSNGYLAQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNVDAVLSAAELRGIR 504
+ Y G +++A + L+EM + GI P+ S L+ GQ +
Sbjct: 554 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 613
Query: 505 LNTIAYNSAIGSYMNIGEYEKAVDLYRSMKNKNTKPDSVTYTILISSCCRMSKYDEAIHF 564
LN I Y + + G+ E+A+ + + M + D V Y +LI +
Sbjct: 614 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 673
Query: 565 FKEMVDLKIPLSEEIYSSMICAYSKQGQLVKAETLFNSLKGSGCCPDLVTYTAMINAYST 624
KEM D + + IY+SMI A SK G +A +++ + GC P+ VTYTA+IN
Sbjct: 674 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 733
Query: 625 TETWEKACSLYHEMETNNIQLDSIACSALMKAYNKGNQAS-----NVLTLAEIMKEKGIP 684
+A + CS + + NQ + ++LT E+ +K +
Sbjct: 734 AGFVNEA---------------EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 793
Query: 685 FNDANFFEMLSACSTLRDWRKATDIIKLMEPSLHLVSVGTINHLLHFLGKSGKMEIMMKL 744
++A I+K + L + T N L+ + G++E +L
Sbjct: 794 LHNA--------------------ILKGL-----LANTATYNMLIRGFCRQGRIEEASEL 853
Query: 745 FYRFMALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQPSNAMYNDILYFAQN 804
R + G S + TY+ ++ L + +K IE+ M + GI+P YN +++
Sbjct: 854 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC-- 886
Query: 805 CGGAECAAIIKERVESLKR 815
C E + R E L++
Sbjct: 914 CVAGEMGKATELRNEMLRQ 886
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8RWS8 | 0.0e+00 | 66.50 | Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana OX... | [more] |
Q9LYZ9 | 1.7e-66 | 25.36 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q9S7Q2 | 5.6e-62 | 27.26 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... | [more] |
Q9FJE6 | 3.8e-58 | 23.55 | Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... | [more] |
Q76C99 | 1.9e-57 | 24.38 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
Match Name | E-value | Identity | Description | |
XP_023526155.1 | 0.0 | 100.00 | pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Cucurbita pepo... | [more] |
XP_023526156.1 | 0.0 | 99.88 | pentatricopeptide repeat-containing protein At2g41720 isoform X2 [Cucurbita pepo... | [more] |
XP_023526157.1 | 0.0 | 100.00 | pentatricopeptide repeat-containing protein At2g41720 isoform X3 [Cucurbita pepo... | [more] |
XP_022934373.1 | 0.0 | 99.14 | pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Cucurbita mosc... | [more] |
KAG6580916.1 | 0.0 | 98.77 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F7H2 | 0.0 | 99.14 | pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1J042 | 0.0 | 98.40 | pentatricopeptide repeat-containing protein At2g41720 isoform X2 OS=Cucurbita ma... | [more] |
A0A6J1F2E1 | 0.0 | 99.13 | pentatricopeptide repeat-containing protein At2g41720 isoform X2 OS=Cucurbita mo... | [more] |
A0A6J1J354 | 0.0 | 98.39 | pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1J8H8 | 0.0 | 98.39 | pentatricopeptide repeat-containing protein At2g41720 isoform X3 OS=Cucurbita ma... | [more] |
Match Name | E-value | Identity | Description | |
AT2G41720.1 | 0.0e+00 | 66.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G41720.2 | 1.2e-280 | 67.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G02860.1 | 1.2e-67 | 25.36 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G74850.1 | 4.0e-63 | 27.26 | plastid transcriptionally active 2 | [more] |
AT5G59900.1 | 2.7e-59 | 23.55 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |