Cp4.1LG20g04860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGCTCAGTACGACTCGGAGCCGAGCCGAGTCTGCTCCGATTCCCTCTCTATAAATACTGGCCCCTTCATCTTCGCCTTTCTACTGTTCCATTTCTCTTCACTTCAATCGTATATGGCCGAAGAATTCCAGGAATCCGAAGTGATTTTCTCCGATCTCGACCACCGCCGTTACCTCCACCGTGCCGACGACGACGATTGCGGCGAGGATTTCTTTAACTTCAACGGCCGCGGAGGAATGGTTGTAGCGCCGCGAAATAAGTATCAACAGCGGACGGTGCGCGATGGTGGACGGCTGTCGAAGAAGGTAATGGCGAGTTCGCTTCCGGTAGGGATTCCGGAAAGAAACCGACGGAGGACGACGGAGGAAGAGGATGAAATGGACGAAGAGGAAATGATTCCGCCGCATGTGGTGGCGGAGAGGCGAATGGCAGGGAAAATGGCGTTCTCTGTTTGTACTGGGAATGGAAGGACGCTGAAAGGACGAGATTTGAGACGAGTAAGGAATTCGATCCTTCGGATGACCGGATTCTTAGAAACGTGA ATGTGTGCTCAGTACGACTCGGAGCCGAGCCGAGTCTGCTCCGATTCCCTCTCTATAAATACTGGCCCCTTCATCTTCGCCTTTCTACTGTTCCATTTCTCTTCACTTCAATCGTATATGGCCGAAGAATTCCAGGAATCCGAAGTGATTTTCTCCGATCTCGACCACCGCCGTTACCTCCACCGTGCCGACGACGACGATTGCGGCGAGGATTTCTTTAACTTCAACGGCCGCGGAGGAATGGTTGTAGCGCCGCGAAATAAGTATCAACAGCGGACGGTGCGCGATGGTGGACGGCTGTCGAAGAAGGTAATGGCGAGTTCGCTTCCGGTAGGGATTCCGGAAAGAAACCGACGGAGGACGACGGAGGAAGAGGATGAAATGGACGAAGAGGAAATGATTCCGCCGCATGTGGTGGCGGAGAGGCGAATGGCAGGGAAAATGGCGTTCTCTGTTTGTACTGGGAATGGAAGGACGCTGAAAGGACGAGATTTGAGACGAGTAAGGAATTCGATCCTTCGGATGACCGGATTCTTAGAAACGTGA ATGTGTGCTCAGTACGACTCGGAGCCGAGCCGAGTCTGCTCCGATTCCCTCTCTATAAATACTGGCCCCTTCATCTTCGCCTTTCTACTGTTCCATTTCTCTTCACTTCAATCGTATATGGCCGAAGAATTCCAGGAATCCGAAGTGATTTTCTCCGATCTCGACCACCGCCGTTACCTCCACCGTGCCGACGACGACGATTGCGGCGAGGATTTCTTTAACTTCAACGGCCGCGGAGGAATGGTTGTAGCGCCGCGAAATAAGTATCAACAGCGGACGGTGCGCGATGGTGGACGGCTGTCGAAGAAGGTAATGGCGAGTTCGCTTCCGGTAGGGATTCCGGAAAGAAACCGACGGAGGACGACGGAGGAAGAGGATGAAATGGACGAAGAGGAAATGATTCCGCCGCATGTGGTGGCGGAGAGGCGAATGGCAGGGAAAATGGCGTTCTCTGTTTGTACTGGGAATGGAAGGACGCTGAAAGGACGAGATTTGAGACGAGTAAGGAATTCGATCCTTCGGATGACCGGATTCTTAGAAACGTGA MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNFNGRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET Homology
BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_022927118.1 (uncharacterized protein LOC111434057 [Cucurbita moschata] >KAG6583932.1 hypothetical protein SDJN03_19864, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019547.1 hypothetical protein SDJN02_18508, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 358 bits (919), Expect = 1.27e-124 Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_023520036.1 (uncharacterized protein LOC111783341 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 286 bits (732), Expect = 1.06e-96 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_023001484.1 (uncharacterized protein LOC111495606 [Cucurbita maxima]) HSP 1 Score: 272 bits (696), Expect = 3.27e-91 Identity = 136/142 (95.77%), Postives = 137/142 (96.48%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_038895158.1 (uncharacterized protein LOC120083461 [Benincasa hispida]) HSP 1 Score: 212 bits (539), Expect = 2.58e-67 Identity = 110/142 (77.46%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. NCBI nr
Match: XP_023541188.1 (uncharacterized protein LOC111801423 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 199 bits (507), Expect = 2.10e-62 Identity = 109/144 (75.69%), Postives = 115/144 (79.86%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A6J1EK43 (uncharacterized protein LOC111434057 OS=Cucurbita moschata OX=3662 GN=LOC111434057 PE=4 SV=1) HSP 1 Score: 358 bits (919), Expect = 6.14e-125 Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A6J1KMV6 (uncharacterized protein LOC111495606 OS=Cucurbita maxima OX=3661 GN=LOC111495606 PE=4 SV=1) HSP 1 Score: 272 bits (696), Expect = 1.58e-91 Identity = 136/142 (95.77%), Postives = 137/142 (96.48%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A6J1GT17 (uncharacterized protein LOC111457175 OS=Cucurbita moschata OX=3662 GN=LOC111457175 PE=4 SV=1) HSP 1 Score: 199 bits (507), Expect = 1.02e-62 Identity = 109/144 (75.69%), Postives = 115/144 (79.86%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A6J1K0L5 (uncharacterized protein LOC111490497 OS=Cucurbita maxima OX=3661 GN=LOC111490497 PE=4 SV=1) HSP 1 Score: 197 bits (500), Expect = 1.18e-61 Identity = 108/144 (75.00%), Postives = 114/144 (79.17%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. ExPASy TrEMBL
Match: A0A1S3B8R0 (uncharacterized protein LOC103487260 OS=Cucumis melo OX=3656 GN=LOC103487260 PE=4 SV=1) HSP 1 Score: 192 bits (487), Expect = 1.02e-59 Identity = 108/146 (73.97%), Postives = 119/146 (81.51%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT2G34340.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 105.1 bits (261), Expect = 5.8e-23 Identity = 71/150 (47.33%), Postives = 92/150 (61.33%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT1G29640.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 101.7 bits (252), Expect = 6.5e-22 Identity = 71/146 (48.63%), Postives = 92/146 (63.01%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT5G45630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 79.3 bits (194), Expect = 3.4e-15 Identity = 59/145 (40.69%), Postives = 75/145 (51.72%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT4G18980.1 (AtS40-3 ) HSP 1 Score: 78.6 bits (192), Expect = 5.9e-15 Identity = 60/142 (42.25%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of Cp4.1LG20g04860 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 65.5 bits (158), Expect = 5.1e-11 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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