Cp4.1LG20g04050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCGTAGATTTTACAAGGGCGAGATCAGCGGAATGAAAGATCCGACGGCGAAGCGTGAGCCGATATTGAAGGCGGTGAGAGATCATTCGGGATCATCTTCGAATCAGGGGGCAAGGGGATTTTACAGTGGTATGGATTCGAGTGCGGTAATGGCTGCGAAGGCGGAGAAACTTAAGCGGGCCGAGGAGTCTCTCAGAACGGTTATGTATTTGAGCTGTTGGGGGCCTAACTAA ATGAGCCGTAGATTTTACAAGGGCGAGATCAGCGGAATGAAAGATCCGACGGCGAAGCGTGAGCCGATATTGAAGGCGGTGAGAGATCATTCGGGATCATCTTCGAATCAGGGGGCAAGGGGATTTTACAGTGGTATGGATTCGAGTGCGGTAATGGCTGCGAAGGCGGAGAAACTTAAGCGGGCCGAGGAGTCTCTCAGAACGGTTATGTATTTGAGCTGTTGGGGGCCTAACTAA ATGAGCCGTAGATTTTACAAGGGCGAGATCAGCGGAATGAAAGATCCGACGGCGAAGCGTGAGCCGATATTGAAGGCGGTGAGAGATCATTCGGGATCATCTTCGAATCAGGGGGCAAGGGGATTTTACAGTGGTATGGATTCGAGTGCGGTAATGGCTGCGAAGGCGGAGAAACTTAAGCGGGCCGAGGAGTCTCTCAGAACGGTTATGTATTTGAGCTGTTGGGGGCCTAACTAA MSRRFYKGEISGMKDPTAKREPILKAVRDHSGSSSNQGARGFYSGMDSSAVMAAKAEKLKRAEESLRTVMYLSCWGPN Homology
BLAST of Cp4.1LG20g04050 vs. NCBI nr
Match: KAG7019649.1 (hypothetical protein SDJN02_18612, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149 bits (377), Expect = 2.88e-45 Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. NCBI nr
Match: KAG6584036.1 (hypothetical protein SDJN03_19968, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123 bits (308), Expect = 2.24e-33 Identity = 64/67 (95.52%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. NCBI nr
Match: KAG6573231.1 (hypothetical protein SDJN03_27118, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012404.1 hypothetical protein SDJN02_25156, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 91.3 bits (225), Expect = 1.78e-21 Identity = 50/78 (64.10%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. NCBI nr
Match: KAE7995563.1 (hypothetical protein FH972_000343 [Carpinus fangiana]) HSP 1 Score: 76.3 bits (186), Expect = 3.82e-16 Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. NCBI nr
Match: OMO65041.1 (hypothetical protein COLO4_31599 [Corchorus olitorius]) HSP 1 Score: 74.3 bits (181), Expect = 2.71e-15 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. ExPASy TrEMBL
Match: A0A5N6QBJ8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000343 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.85e-16 Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. ExPASy TrEMBL
Match: A0A7N2LSL0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 8.34e-16 Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. ExPASy TrEMBL
Match: A0A1R3H3Y0 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31599 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.31e-15 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. ExPASy TrEMBL
Match: B9H210 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G033300 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.35e-15 Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. ExPASy TrEMBL
Match: A0A5N5MZZ3 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_005484 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.91e-15 Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein ) HSP 1 Score: 56.6 bits (135), Expect = 1.0e-08 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. TAIR 10
Match: AT4G05070.1 (Wound-responsive family protein ) HSP 1 Score: 51.6 bits (122), Expect = 3.3e-07 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of Cp4.1LG20g04050 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein ) HSP 1 Score: 42.0 bits (97), Expect = 2.6e-04 Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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