CsaV3_2G029470 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAATCCAGCCGTTTCGACGAGGCCAAAATCAAACGGAGCAAACAGCTTCGTCGTTCACGTGAAGGATGATCAAGATGATTACAGAGGAGGAAGTCCGGCCGAAAGAATCTCTCCGGCGAGGATTCTGAGCCGGATCCGCCGTGTTTTTATGCGATTCATATTCTATTTACCTTCTCGAGGTTCGGCGGCGGCGGCTGCGGCGGCGTTGAAGCAGAGAAATCTGGAGAAATTTGAACCGCCGAAGACTTCCTGCAGTTCGAGTTACTCGTCTTACTCGCATTACAATGAAGCCATTGCCGATTGTATTGAGTTCTTAAACAAATCGTCGCAGGATCAAATCGGCGTCGATGAAGGCCGAATTTCCGATGCAAATGCGATGGTATGAGATAACATTGAATATGATGATATAATGATGCACATACATGTACGTATACACAGGAAGCAGTAATTCGATGTTGAATAATCGTTTCGATTTCTGAATTTTGAGGTGTCAACGAACAAGTTTAATCGTCGAGTTCGATTTTAAATCTGTTTTTTCTTTACAAACTGCCTTGAGATTGAAACAGAGTATCATTGGTTGTTGCTTATTTCAGTTTCTAATTTCTTCTTCACATTTGGACGGAAGTTTTAGTTAATCTCTATTCTTGCACGAAATGATTTGACAATATGTTTAGACGTGAAAAAAAAAAAAAAACTTGGATGGATAATAATATGCACCAATCTCGTATTTACTACAGAAACAATCAAATGTGTGATAGAGAGATGATAAATATATGAGATAGAAATGTCACAAGATGCACCAAACAATATTACTTACATTTTTATGCCAAAAAAAACAATTTCACTTACAAGTCAGGGTCCAATATGGAAGCTTGAGGGGGAAAAAAAGTTTATGGCTGAAGTTTGA ATGAAGAATCCAGCCGTTTCGACGAGGCCAAAATCAAACGGAGCAAACAGCTTCGTCGTTCACGTGAAGGATGATCAAGATGATTACAGAGGAGGAAGTCCGGCCGAAAGAATCTCTCCGGCGAGGATTCTGAGCCGGATCCGCCGTGTTTTTATGCGATTCATATTCTATTTACCTTCTCGAGGTTCGGCGGCGGCGGCTGCGGCGGCGTTGAAGCAGAGAAATCTGGAGAAATTTGAACCGCCGAAGACTTCCTGCAGTTCGAGTTACTCGTCTTACTCGCATTACAATGAAGCCATTGCCGATTGTATTGAGTTCTTAAACAAATCGTCGCAGGATCAAATCGGCGTCGATGAAGGCCGAATTTCCGATGCAAATGCGATGGGTCCAATATGGAAGCTTGAGGGGGAAAAAAAGTTTATGGCTGAAGTTTGA ATGAAGAATCCAGCCGTTTCGACGAGGCCAAAATCAAACGGAGCAAACAGCTTCGTCGTTCACGTGAAGGATGATCAAGATGATTACAGAGGAGGAAGTCCGGCCGAAAGAATCTCTCCGGCGAGGATTCTGAGCCGGATCCGCCGTGTTTTTATGCGATTCATATTCTATTTACCTTCTCGAGGTTCGGCGGCGGCGGCTGCGGCGGCGTTGAAGCAGAGAAATCTGGAGAAATTTGAACCGCCGAAGACTTCCTGCAGTTCGAGTTACTCGTCTTACTCGCATTACAATGAAGCCATTGCCGATTGTATTGAGTTCTTAAACAAATCGTCGCAGGATCAAATCGGCGTCGATGAAGGCCGAATTTCCGATGCAAATGCGATGGGTCCAATATGGAAGCTTGAGGGGGAAAAAAAGTTTATGGCTGAAGTTTGA MKNPAVSTRPKSNGANSFVVHVKDDQDDYRGGSPAERISPARILSRIRRVFMRFIFYLPSRGSAAAAAAALKQRNLEKFEPPKTSCSSSYSSYSHYNEAIADCIEFLNKSSQDQIGVDEGRISDANAMGPIWKLEGEKKFMAEV* Homology
BLAST of CsaV3_2G029470 vs. NCBI nr
Match: KAE8652124.1 (hypothetical protein Csa_022629 [Cucumis sativus]) HSP 1 Score: 288.5 bits (737), Expect = 3.2e-74 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. NCBI nr
Match: KAA0065168.1 (hypothetical protein E6C27_scaffold82G005050 [Cucumis melo var. makuwa]) HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58 Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. NCBI nr
Match: XP_022996993.1 (uncharacterized protein LOC111492057 [Cucurbita maxima]) HSP 1 Score: 194.1 bits (492), Expect = 8.2e-46 Identity = 97/130 (74.62%), Postives = 112/130 (86.15%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. NCBI nr
Match: KAG7029433.1 (hypothetical protein SDJN02_07772, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45 Identity = 98/135 (72.59%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. NCBI nr
Match: KAG6598497.1 (hypothetical protein SDJN03_08275, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45 Identity = 98/135 (72.59%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. ExPASy TrEMBL
Match: A0A0A0LPF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368240 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.2e-64 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. ExPASy TrEMBL
Match: A0A5A7VC16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005050 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 5.4e-59 Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. ExPASy TrEMBL
Match: A0A6J1KCK5 (uncharacterized protein LOC111492057 OS=Cucurbita maxima OX=3661 GN=LOC111492057 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 4.0e-46 Identity = 97/130 (74.62%), Postives = 112/130 (86.15%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. ExPASy TrEMBL
Match: A0A6J1CRC4 (uncharacterized protein LOC111014042 OS=Momordica charantia OX=3673 GN=LOC111014042 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 7.3e-40 Identity = 91/128 (71.09%), Postives = 105/128 (82.03%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. ExPASy TrEMBL
Match: A0A6A1UVD7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G002767 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.4e-21 Identity = 61/119 (51.26%), Postives = 82/119 (68.91%), Query Frame = 0
BLAST of CsaV3_2G029470 vs. TAIR 10
Match: AT1G75717.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 5.9e-10 Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|