CsaV3_4G010110 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G010110
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 7900306 .. 7900561 (+)
RNA-Seq ExpressionCsaV3_4G010110
SyntenyCsaV3_4G010110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTGTTCACTGTGCATTTCCAACAATTCTCGGAAGTTACCGTCGTCGTACTACGGCGGTGGGTACAGCGAAATAACCAAAAAACGAAAGGGGTGAGCCCCGGGGGGGGACTGTTTGCTACGTGTCACCACCGCAACTCCATTTTGATTTGCACTGTTCAAGAAATGAAAGCACTTCCCAATAACCTGCGGGTTTACAGTTACGCATCTGAGGATGAAGAGCACTTTTCTTCTCATGACGTGTCGCTCTAG

mRNA sequence

ATGGGGATTGTTCACTGTGCATTTCCAACAATTCTCGGAAGTTACCGTCGTCGTACTACGGCGGTGGAAATGAAAGCACTTCCCAATAACCTGCGGGTTTACAGTTACGCATCTGAGGATGAAGAGCACTTTTCTTCTCATGACGTGTCGCTCTAG

Coding sequence (CDS)

ATGGGGATTGTTCACTGTGCATTTCCAACAATTCTCGGAAGTTACCGTCGTCGTACTACGGCGGTGGAAATGAAAGCACTTCCCAATAACCTGCGGGTTTACAGTTACGCATCTGAGGATGAAGAGCACTTTTCTTCTCATGACGTGTCGCTCTAG

Protein sequence

MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL*
Homology
[Close]
BLAST of CsaV3_4G010110 vs. NCBI nr
Match: KGN53781.1 (hypothetical protein Csa_014905 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-20
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 52
          MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL
Sbjct: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 51

[Close]
BLAST of CsaV3_4G010110 vs. ExPASy TrEMBL
Match: A0A0A0L0W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G127000 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-20
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 52
          MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL
Sbjct: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 51

The following BLAST results are available for this feature:
BLAST of CsaV3_4G010110 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53781.13.6e-20100.00hypothetical protein Csa_014905 [Cucumis sativus][more]
BLAST of CsaV3_4G010110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G010110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0W21.8e-20100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G127000 PE=4 SV=1[more]
BLAST of CsaV3_4G010110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G010110.1CsaV3_4G010110.1mRNA