Tan0019560.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTGGAAGAGGCGACGGCAGAGACGGCGGCGGTTGAAGTTCCGATAGAATTTCCGGTAGGTTTCCGGTTTGCCCCGACTGACGAACAGCTTGTTATGCACTATCTGAGGAACAAAGTATTGGAGATTCCATTTCGAGTGGAATTTATTAAAGAAATCAATATTTCTGAGTTATTTCGAAAGCAACCTAAATCCATTGGTATGAATACCTCTGTATTCCGATTATGTTAAGAAAATTTCATTTTGAATTTTCACCAACCTTATTTTAGGTCAATTGATTAACATAATATTTCTTAAGTTAGAGGTTGATAGTTTAAATCTTCATTCAATTTAAAAAATGACCATATTAATTTCTTTTAGGATAAATTATAAATTTGATCCCGTGTTTGAACTTTCGTAGAATTTAGTTCTTATGATTTTAAAAATTACAGGACTATTTATCAGGATTTTATTTAAGGACAAATTCTAATTTTTAAGACCTTTGGTTGCTAATTTGAGCATAACTCTTATCTCAAAAATCGATGGTTCAATCTTCTATCCTACCTTAGTTCAACAAGGAAAAAGAGAAAAAAACCTTCACTTTGGCTCTTTCCTAGAAGCCTCAAGGCTACAGTTAGCTTTTTAAGGGACATTGATGTTCTGTTGATTTTCTTTTTCTAACAATTAAGGTTTTAAGCGACTCCATAATTATAATGTGGATATTGTTTTTTTTTCTGGTTCAACAAATTAAGGTTTTATTACTAAAACAAAAAAATAAGATTTTAAGCGACTAAGTATAATGTGGGAGTGATAATTAAGGTTTTTAGCAAAAAAAAAAAAAAACAACTACATATTGTGATCCTCAAAAAGCACCTCCAAATCCCATATCAAAATCATTCCCTAATCAAAATCATGATGTTTGGAAGTGATTTAATTTTTTTTTTTTTAAAGTTAAAAACACTTAAAATGCTTGGTGAGAAAATCACTTAAGATGTTGTATGAGAAAGTATTTGTAGGGTGATTTTAGCCCAATTACTTATTAGGAAAGCACCTGAAAATTTTTTAAGAATTTAAGACAATCCATGCATGAAAACATTTATAATTAGTGTATTTTTGCTAAGATCACTTTTATTAAGTAGCTTTTTTACTGATTTCTTTTCTGTTTTTTCTTTTTGGTTAAAGTGCCACGCCATTCTGGCGAGAGATATTGGTACTTTTTCATTCCTTTGTCCGAAGAAGGTTTCAATCAATATACAAATGAAATACAAATAGTGGGTAATGGTAAAGGATTTTGGAAGTTCATGAGTGATTCATATCCATTCGAAAATATTAACAATCAAGTCATAGCCATGAAGAAGGACCTTGCATATTTTAAAGGAGATCCTACAATTCCAAGAAAGTCTCATTGGACAATGCAACTTTTCCAATTATCCAAGGAATGTTGCAACAATTTAGAAGTGGATCAGCAATTGGTAGGATAATGATCTTCTTATAGAACTTTCAAATAATTTGAATTCGAAGTAGATTACCTATTGTGATAGGAAAATTTATGGATTTTTATAAAAACCGTTTTATAAACATGTTTACGTTTTTAGTTTTTCAAATTAAAGTTCATTTGAGTGGCTAATAAAAGTTAATGTTACTGTAAAAACACATTCATCATTGAAAATACTAAGAATTTTTAAAAAAGAATAATTATTCCAACTTGTTTTCAAACATGGAAAATAAACTTAGTCTTTTTTGCTTGAATTTATAATAATATCATGTTTTCTAATGATCCTTTCCTTTCATTGCAGGTAGGAAAATGGTGCTTGGTTAAAATAAGAAAAGGAAAGAGTCGCAAGCTTAAATCTTGA ATGGATCTGGAAGAGGCGACGGCAGAGACGGCGGCGGTTGAAGTTCCGATAGAATTTCCGGTAGGTTTCCGGTTTGCCCCGACTGACGAACAGCTTGTTATGCACTATCTGAGGAACAAAGTATTGGAGATTCCATTTCGAGTGGAATTTATTAAAGAAATCAATATTTCTGAGTTATTTCGAAAGCAACCTAAATCCATTGTGCCACGCCATTCTGGCGAGAGATATTGGTACTTTTTCATTCCTTTGTCCGAAGAAGGTTTCAATCAATATACAAATGAAATACAAATAGTGGGTAATGGTAAAGGATTTTGGAAGTTCATGAGTGATTCATATCCATTCGAAAATATTAACAATCAAGTCATAGCCATGAAGAAGGACCTTGCATATTTTAAAGGAGATCCTACAATTCCAAGAAAGTCTCATTGGACAATGCAACTTTTCCAATTATCCAAGGAATGTTGCAACAATTTAGAAGTGGATCAGCAATTGGTAGGAAAATGGTGCTTGGTTAAAATAAGAAAAGGAAAGAGTCGCAAGCTTAAATCTTGA ATGGATCTGGAAGAGGCGACGGCAGAGACGGCGGCGGTTGAAGTTCCGATAGAATTTCCGGTAGGTTTCCGGTTTGCCCCGACTGACGAACAGCTTGTTATGCACTATCTGAGGAACAAAGTATTGGAGATTCCATTTCGAGTGGAATTTATTAAAGAAATCAATATTTCTGAGTTATTTCGAAAGCAACCTAAATCCATTGTGCCACGCCATTCTGGCGAGAGATATTGGTACTTTTTCATTCCTTTGTCCGAAGAAGGTTTCAATCAATATACAAATGAAATACAAATAGTGGGTAATGGTAAAGGATTTTGGAAGTTCATGAGTGATTCATATCCATTCGAAAATATTAACAATCAAGTCATAGCCATGAAGAAGGACCTTGCATATTTTAAAGGAGATCCTACAATTCCAAGAAAGTCTCATTGGACAATGCAACTTTTCCAATTATCCAAGGAATGTTGCAACAATTTAGAAGTGGATCAGCAATTGGTAGGAAAATGGTGCTTGGTTAAAATAAGAAAAGGAAAGAGTCGCAAGCTTAAATCTTGA MDLEEATAETAAVEVPIEFPVGFRFAPTDEQLVMHYLRNKVLEIPFRVEFIKEINISELFRKQPKSIVPRHSGERYWYFFIPLSEEGFNQYTNEIQIVGNGKGFWKFMSDSYPFENINNQVIAMKKDLAYFKGDPTIPRKSHWTMQLFQLSKECCNNLEVDQQLVGKWCLVKIRKGKSRKLKS Homology
BLAST of Tan0019560.1 vs. ExPASy Swiss-Prot
Match: Q8GY42 (NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-14 Identity = 46/134 (34.33%), Postives = 68/134 (50.75%), Query Frame = 0
BLAST of Tan0019560.1 vs. ExPASy Swiss-Prot
Match: Q9LD44 (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.9e-14 Identity = 49/141 (34.75%), Postives = 70/141 (49.65%), Query Frame = 0
BLAST of Tan0019560.1 vs. ExPASy Swiss-Prot
Match: Q84K00 (NAC domain-containing protein 78 OS=Arabidopsis thaliana OX=3702 GN=NAC078 PE=2 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 8.3e-14 Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 0
BLAST of Tan0019560.1 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13 Identity = 44/138 (31.88%), Postives = 71/138 (51.45%), Query Frame = 0
BLAST of Tan0019560.1 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 0
BLAST of Tan0019560.1 vs. NCBI nr
Match: XP_022154288.1 (putative NAC domain-containing protein 94 [Momordica charantia]) HSP 1 Score: 190.3 bits (482), Expect = 1.5e-44 Identity = 86/152 (56.58%), Postives = 115/152 (75.66%), Query Frame = 0
BLAST of Tan0019560.1 vs. NCBI nr
Match: XP_024042717.1 (NAC transcription factor 25 [Citrus clementina]) HSP 1 Score: 138.7 bits (348), Expect = 5.2e-29 Identity = 71/169 (42.01%), Postives = 101/169 (59.76%), Query Frame = 0
BLAST of Tan0019560.1 vs. NCBI nr
Match: XP_015385449.1 (NAC transcription factor 25-like [Citrus sinensis]) HSP 1 Score: 138.7 bits (348), Expect = 5.2e-29 Identity = 70/169 (41.42%), Postives = 102/169 (60.36%), Query Frame = 0
BLAST of Tan0019560.1 vs. NCBI nr
Match: XP_027122228.1 (NAC domain-containing protein 101-like [Coffea arabica]) HSP 1 Score: 123.6 bits (309), Expect = 1.7e-24 Identity = 62/148 (41.89%), Postives = 87/148 (58.78%), Query Frame = 0
BLAST of Tan0019560.1 vs. NCBI nr
Match: KAG2679412.1 (hypothetical protein I3760_11G049300 [Carya illinoinensis]) HSP 1 Score: 123.2 bits (308), Expect = 2.3e-24 Identity = 65/162 (40.12%), Postives = 99/162 (61.11%), Query Frame = 0
BLAST of Tan0019560.1 vs. ExPASy TrEMBL
Match: A0A6J1DJX4 (putative NAC domain-containing protein 94 OS=Momordica charantia OX=3673 GN=LOC111021578 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 7.3e-45 Identity = 86/152 (56.58%), Postives = 115/152 (75.66%), Query Frame = 0
BLAST of Tan0019560.1 vs. ExPASy TrEMBL
Match: A0A6P6X3C1 (NAC domain-containing protein 101-like OS=Coffea arabica OX=13443 GN=LOC113739188 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 8.3e-25 Identity = 62/148 (41.89%), Postives = 87/148 (58.78%), Query Frame = 0
BLAST of Tan0019560.1 vs. ExPASy TrEMBL
Match: A0A5C7H419 (NAC domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024195 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.2e-23 Identity = 61/164 (37.20%), Postives = 96/164 (58.54%), Query Frame = 0
BLAST of Tan0019560.1 vs. ExPASy TrEMBL
Match: A0A5B7C6Q7 (Putative NAC domain-containing protein 68-like OS=Davidia involucrata OX=16924 GN=Din_045432 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 4.6e-23 Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = 0
BLAST of Tan0019560.1 vs. ExPASy TrEMBL
Match: A0A061G4R1 (Transcription factor, putative OS=Theobroma cacao OX=3641 GN=TCM_014180 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 6.0e-23 Identity = 63/164 (38.41%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of Tan0019560.1 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 ) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15 Identity = 46/134 (34.33%), Postives = 68/134 (50.75%), Query Frame = 0
BLAST of Tan0019560.1 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 ) HSP 1 Score: 79.3 bits (194), Expect = 3.5e-15 Identity = 49/141 (34.75%), Postives = 70/141 (49.65%), Query Frame = 0
BLAST of Tan0019560.1 vs. TAIR 10
Match: AT5G04410.1 (NAC domain containing protein 2 ) HSP 1 Score: 78.6 bits (192), Expect = 5.9e-15 Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 0
BLAST of Tan0019560.1 vs. TAIR 10
Match: AT1G26870.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14 Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of Tan0019560.1 vs. TAIR 10
Match: AT5G62380.1 (NAC-domain protein 101 ) HSP 1 Score: 73.2 bits (178), Expect = 2.5e-13 Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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