Tan0017649.2 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCATTTCTTCCCTCCCTCGTTTTGGGCAACAGGGAGTTTTTTCTCCGAAATTAAAAAAAGGGGTAAAAGCCAAAGAGAAATTAAAAAGAGAGAGAGAGAGAAAATCATTATAATGGCGGACCCGCAGCGGTGGTGAGAGCACTTGCACAATTCCAACGATTCATCCATAAACAATCATTAATCACATAGCTTTTTGTTCGAATTCCAAATCCGAGAAGATATAGGCACAGCCCAGTTCCGGTTCTTGTGGGATGGAGGTTGTTTTTTTCTTTAATCCCGTTTTCAATTCCATTTCTGTTTTTGTTTTAATTTCGTATCGATTTCTCCACTTTTGAGCCACCCCCAGAATTTATTATTTGAATTGATCGTCTGTTTCTGCAATTGGGCTTGGAATTGTCGACTGGGGATATGTGTGTTTTTGTTTTATTTTGTAGATTTTCCTCTTCTGTTGTTGTTGGTTTTCGTGGTATTCTGTTTTTCTTTCCGGAGACCTGTAAATGGGGGTCTTGTTTTGTTTCCTTCCTCAGGTTTTGTGCAATTCTTGTTTCGTTGTTGAATATTGATTTTCTAATGGAGAGATGGTTTATCAATTTGTAATTTGTAAAAGGAGAGGAACGGGTGTTTGGATTTGTGGTGCCTGGTCTAATTTCTTTTCGATTTCAAGTCATTTTTTAGGACTTCTCGGTAGGTAAGCTAGTTTTAATCGCATGTTTTTTGGAATTTGAGAGAAATTGAGTTGTTTTGATTGGCATATGAATCCCTGAATTGATGTCTGTTTGTTTTACTATGTTTGTCTTGACGGGTTCAAATGGACCAATGATTTTATTAGGTGATTTATCTCCATAATTTTAAGAGCATTTGATGTGGACTGCAGCCTTTTGTATGTCTATGTTATGTTACTTTTCCTTTTCTATAGAAGATGATGTCATCATACATTTTTCCATTCATGCTTTGTTACTTTTCCTTTTGTATTTTTCATCTGAAAACAAAATATTGAGCTAAATTACTCTAGGATGTTTCGTTTTTTTGTTCATAATTGGACATCTTTATACTTGCTAAACTTAGATTTTAATCGGTGTTATATGTTTTTTTCTTGTTTATTTTTTCTAGGGGAAAAATCAAAGAAACCTTTTTTTTTAATATACACTCTTTCAATTTTAAAATTAAACAGGGGGAATTTTTTTAATCTTTTTTGTATAATTTTTTGAATTTAAGATTGCACCCTTCTTTGTTCCTGGCTCCACCTCTGGTTCTTTCATTGTTCAGAAAAATAAGTGATTCAGGTGATGGTGGCAGTTTGGGGGTAGAGGGACTGAAGAGAAAAATGTTATTTACATTTGTTTGTGCATGGTGAAAGTTTATAGAATAACTTAAGTCCCGAGAGATGATTAATATTTTGATATTAGACAGACCATGGTATGGAGCTCTTGTGTTATTTGGGTTTTTTACTATTGCTATGGGTTTGTAAGTAATCTAGATTGTTTTCTTTTTATCTCACCAAGGTTTACAAATCAAGAGTTCATCAAACTAAATAAATTTGAAGTTGATCTTTCAGTGTTTTGAAGCACTTAAAGCAAGGATGTGCCTTGGCACAATCCAAAATTAAGCTAAGATGTCGAACTCATAGTTTTGATGAGCTTGGGCTTGTTAAGTTTGGGGTATGAAGTCTGAGTTTATATGCTTGGATTGTACAAAATATGGGTTGTAAAAACTTGAGGTTTGTATAATTAGTGTTTGCTTTGTAGAGTTATAATTTATAAACTTTGTATGTAGTATGAAAGGTGGTTTCAAACTCTGAATTTGTGTAGTTTGTAGGATTAGTGAACTTATAGCTTGGAATAAGAAAATCCCAGTATCAAATGTAGGCTCAACTTCTTCACTCTGGATTATACGAAACTAACGTGAGCTAGACGCCCCTCAGTGATTGCAAAAGAATAGAAAATGGTCTGCAGCATTATGAGATGGGACTTGGACTTCAGGTTATGTCAGTATCCTAACCTAATGGCATATATGTCATCATTTTACTAGTTTGGATTTCAAAAATATTGAGGGTGTTGCTAAGTCCTATACGTTATTAAGCGTTGTTGATCGCTATTTGGTTTTTGTTATCACTTGACGTTTGGTCAAACTACGTGAGCAAATCTCCAGACAACACGAAACGTTCTACTCAATGTGTTTACTGACATGCCCTTTTTTTGTCTGGTTTAACAGGATTGAACTCGTGGATGGATGATGGTTGGCATATGATGAAGAGTTTCCATTAATAGCTCCAAGAATTCTATTAAAATTTAAATAAGCCATGGCTCCTGGAAGCAGTACCTGCAAAGAAGTTGCCGATTCTCACCCTTCAGTTTCTGGTCATGACATAGCAATGTCTAAATCAGAGAATAATTCTACATCTTCAAAAGTCCTACTTGGTCTGGGAGGGAAACTTGGTGTTTATTCAACCAATGGTGTGCAAGAATTGCTTGAGTGCCCTGTCTGCACAAACCTGATGTACCCTCCAATTTACCAGGTATGTACTATGTACCCTGTTTTTCCTCTTTTAATTTAGGCCATGCTTGAAAGTGTTTTAATCATGACAAAAAGTACTTATTCCATGGGTAAAAGCACTTTGCACTCAAACTTATTGTGTTTGAGATTAACATAAAAATGCTTTTGAAAAAAGCCAAAAGCACCTTAAAAGGCAGTGTGAGAATGCATTGTAGGGTGTTTTTGGCTTCGGTGCTTGGCTGGGAAGCATTTTTAAGAGTGTAGAAACAAGCATCGAAGTAATTTGGTATGGTAGCAAGTACTTTTTTATTGCTTGTAAAGAAGTATTTTTTCTAACAGAACCTGTTTATAGGGCAACTTGTTTATAAGGCCTCTCAAACACACATTTAGACTGAGTTAGTAAGCTTAAGCAATGCTGTTGTGAATCGCATACAATTGCCAAAGGCCTGTGTAAACATGGAGAAATGATTTTGCAAAATTACCTTCATTTGTAAAGCATCTTCCATACTATGCCCAATGTGCTTTAGAGTTATTTCAATGATTGGGTTCAATTGATGAAAGCTGATGTTAATTTCTTTACGGTTGAATCTTTATTTCATTCCTCAATGAAATTTGTTTTCTTTCCCAAAAAAATTGTTTAGAGTGTGCAGAATTTTATTAAGAATTTTCATAAGTTGCTAATTTCATTCTTTCGCAGAATTTCTTACAATGTTTTCCATAGAAACATGAGGCCCATGCATATAGGAATTGGTGTTTTTCACATTCCTTTGAGCTTCTTATTTGAGCAATTAATTAATAATCTATCTAAGTCGTTGACGATATAGGGCGTGTATAAGTTCCTTTTTTGTCTCCCTTTCTTCTTTTTCTTTTTCAAAGGGGGGAAAAACATGTTTGGTATGATCATTTGTTCTTTCTTTTTAAATTTTATGGAAGAAAACAAATAGAAACGTGTTTAGAAAGATTTTTTTCAATTCTTGTTCTCTCAAATTTAAAATTTTTAAAACTGAAGTTTTTCTTATTTAAAAACAAATTATTCAAAATTATTAGGTTATTTTTATATTTATTAGGAATTTTATAAGTAAAAGTAATAAAGAAATTTATATATTTTTTGAAAAACTGAAGAAACAGGGATTCAGAATTCTTTTCTTTTTTTCTTTTTTAATTTGCATACAATTTACGAAACGCTTATTAAAAATGGAGAATGAGAAATAGGAATCAATTACCAAACACATATATTTAAATGGTTGAAATATAAAATAGAAAATAAAAAATAGGAATGTTAGATAACTCCCTATATGCTAGAAATGCCTACTCTGTCCAAGATTTTTTTGTCTTTTTTTTTTTAACTCAAAAGGAAAGGCAGTGAAATGCTATTATAACAACCACCATGTAGAAATTATGATTAGAAAGGAATAGGAGTTTTCAGAAAACTAGTTGAGCTTAAATCTCTTTGAATCTCCCAAATCTTACATTATTTAATACCAAATCTCTTGATGATTAACTTAGCTTTTTTTTTTAAATTTTAAATTTTTATTTTGCAATTGCTTTTCTGTCTTTAGAAATAGAAATTATTATTGTTTACCTACAGTTTTCTTTTTATAGTGTCCATTATGAAATCTTGGCCAAATTTCAAAAACAAAAACATAGTTTTGAAAAGCCTTTTTTTTTTAGTTTTTGAAATTTGCTTGATACTTTAAAAACGTTTTAATAGTACGTTGCAAATCAAAGAAAAATCCTATTAAATGGGCATTTTTAAAAACAGAAAAAAATTGTTATCAGAGGGCTCTCGACTTTTTTTAGTTTTTTTTGTTGTTCAGTTACTTTTTCTTAATGATTTGCTCTTAATCTTTACTTGAATGGCCATATGAATTGAAGAAACATTAATTTGTGTATATAACAACTGTGACATATCTTATTTTGTTGAGGAGATAAATCTGGATTTCTGCAGTTTTAAATGAACAGATTATGAATTTGTATGGCCTAATAGATTAATTGTTGATTGAATCTTCATTAGAGGGTCGATTTGCACTCTATGCTGTGGCACATTCTCCCTATTTCTGGTTCTTAAGTTTTTTTCTTAATATTAAAGTTGCATCGAAGACTTAGAACATCTCTTTATTCTTGAATCTTTATGACATGGAGATGTGATATATTTTCTGCCTCTGCTTTGTTTCGGACTTGCTTTACTGGCTTTTGAACTTTAGTGCCCGAATGGCCACACATTGTGCTCGAACTGCAAGATCAGAGTTAGCAACTCTTGCCCAACCTGTCGTCACGAACTTGGAAATATAAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTGGAAATCCCCTGCAGATACCAGAATTTGGGTTGTCAAGATATTTTTCCTTACTACAGTAAGCTTAAGCATGAGCAACACTGTCGATTCCGTCCGTACAACTGCCCTTATGCTGGATCAGAATGCTCGGTCACAGGCGACATTCCGTCTCTTGTTGCGCATCTCAAAGATGATCACAAGGTTGACATGCATGACGGGTGTACCTTCAATCATCGCTATGTGAAATCAAACCCACATGAAGTCGAAAATGCCACGTGGATGCTAACGGTAGGCGCTTGCTCTATATAGCATTAATATACTTTCTCACCATGATGACTTCATATAACATTAACTTATATTAACCATCACACGTAGGCCAAATGGTCAACAAGGGGCATAGTTAATTAATAGTTAAAAGGGTTTAGAAGAAATGAGTTCAAGCTATGATGGCCATCTACCTAGGATTTAATAGGTATAAGTTTTCTTGGAAATCAAATGTGGTAGAGTCATGTGGTCGTCCTATGAGAATAGTCAAGGTGAATGCAAGCTGGCTCAAACACTCACAAATATTATAAAAAAAAAAATCTATGAACAGTTCATATGTGTATTATTTTTAAATTGCACAATCTGAACTATGATAATTGCTACATTTTCGGATTGCTCTACTTTTATGATGTTCTACTTTTAATTTTCATATATAACTTCGGATAAAGATCTGATAAACCCGGTTTTCTTCCATCTTTGAACGTTGGAATGTTTTATACTACCTTGCATTGGCAGGTTTTCAACTGCTTTGGAAGGCAGTTCTGCTTGCATTTCGAGGCGTTCCAGCTAGGAATGGCACCTGTTTACATGGCATTTTTACGATTCATGGGTGACGATAATGAAGCAAAGAAGTTCAGCTACAGTTTGGAAGTGGGTGGCAACGGGCGTAAACTGATATGGCAAGGAATTCCGAGGGGCATCCGCGACAGTCACCGAAAAGTTCGTGACAGTCAAGATGGTCTCATCATTCAAAGAAACCTGGCACTGTATTTTTCAGGAGGGGAAAGGCAAGAGCTGAAACTGAGAATCACGGGTCGAATATGGAAAGAAGAATGAGATCAAGGAACCACGCTCTGTGTTGTTGAGGTGAATGTATTATTGTACAGTTAAAACAAGTTTGTTAGCCAACAGCTGGGGTTTGCTCCAATTGCTGGAGAAGCTTTTGGAGAAACATCCAAGCTAATATAAAAAAATGTAATTTACCAAATGAATCAAAAAAAAACATTTTGCTGCCTCATGTTTTATGTATTTAAAAGCCAAGTTTCTCC GTCATTTCTTCCCTCCCTCGTTTTGGGCAACAGGGAGTTTTTTCTCCGAAATTAAAAAAAGGGGTAAAAGCCAAAGAGAAATTAAAAAGAGAGAGAGAGAGAAAATCATTATAATGGCGGACCCGCAGCGGTGGTGAGAGCACTTGCACAATTCCAACGATTCATCCATAAACAATCATTAATCACATAGCTTTTTGTTCGAATTCCAAATCCGAGAAGATATAGGCACAGCCCAGTTCCGGTTCTTGTGGGATGGAGGTTGTTTTTTTCTTTAATCCCGTTTTCAATTCCATTTCTGTTTTTGTTTTAATTTCGTATCGATTTCTCCACTTTTGAGCCACCCCCAGAATTTATTATTTGAATTGATCGTCTGTTTCTGCAATTGGGCTTGGAATTGTCGACTGGGGATATGTGTGTTTTTGTTTTATTTTGTAGATTTTCCTCTTCTGTTGTTGTTGGTTTTCGTGGTATTCTGTTTTTCTTTCCGGAGACCTGTAAATGGGGGTCTTGTTTTGTTTCCTTCCTCAGGTTTTGTGCAATTCTTGTTTCGTTGTTGAATATTGATTTTCTAATGGAGAGATGGTTTATCAATTTGTAATTTGTAAAAGGAGAGGAACGGGTGTTTGGATTTGTGGTGCCTGGTCTAATTTCTTTTCGATTTCAAGTCATTTTTTAGGACTTCTCGGTAGGTAAGCTAGTTTTAATCGCATGTTTTTTGGAATTTGAGAGAAATTGAGTTGTTTTGATTGGCATATGAATCCCTGAATTGATGTCTGTTTGTTTTACTATGTTTGTCTTGACGGGTTCAAATGGACCAATGATTTTATTAGGTGATTTATCTCCATAATTTTAAGAGCATTTGATGTGGACTGCAGCCTTTTGTATGTCTATGTTATGTTACTTTTCCTTTTCTATAGAAGATGATGTCATCATACATTTTTCCATTCATGCTTTGTTACTTTTCCTTTTGTATTTTTCATCTGAAAACAAAATATTGAGCTAAATTACTCTAGGATGTTTCGTTTTTTTGTTCATAATTGGACATCTTTATACTTGCTAAACTTAGATTTTAATCGGTGTTATATGTTTTTTTCTTGTTTATTTTTTCTAGGGGAAAAATCAAAGAAACCTTTTTTTTTAATATACACTCTTTCAATTTTAAAATTAAACAGGGGGAATTTTTTTAATCTTTTTTGTATAATTTTTTGAATTTAAGATTGCACCCTTCTTTGTTCCTGGCTCCACCTCTGGTTCTTTCATTGTTCAGAAAAATAAGTGATTCAGGTGATGGTGGCAGTTTGGGGGTAGAGGGACTGAAGAGAAAAATGTTATTTACATTTGTTTGTGCATGGTGAAAGTTTATAGAATAACTTAAGTCCCGAGAGATGATTAATATTTTGATATTAGACAGACCATGGTATGGAGCTCTTGTGTTATTTGGGTTTTTTACTATTGCTATGGGTTTGTAAGTAATCTAGATTGTTTTCTTTTTATCTCACCAAGGTTTACAAATCAAGAGTTCATCAAACTAAATAAATTTGAAGTTGATCTTTCAGTGTTTTGAAGCACTTAAAGCAAGGATGTGCCTTGGCACAATCCAAAATTAAGCTAAGATGTCGAACTCATAGTTTTGATGAGCTTGGGCTTGTTAAGTTTGGGGTATGAAGTCTGAGTTTATATGCTTGGATTGTACAAAATATGGGTTGTAAAAACTTGAGGTTTGTATAATTAGTGTTTGCTTTGTAGAGTTATAATTTATAAACTTTGTATGTAGTATGAAAGGTGGTTTCAAACTCTGAATTTGTGTAGTTTGTAGGATTAGTGAACTTATAGCTTGGAATAAGAAAATCCCAGTATCAAATGTAGGCTCAACTTCTTCACTCTGGATTATACGAAACTAACGTGAGCTAGACGCCCCTCAGTGATTGCAAAAGAATAGAAAATGGTCTGCAGCATTATGAGATGGGACTTGGACTTCAGGATTGAACTCGTGGATGGATGATGGTTGGCATATGATGAAGAGTTTCCATTAATAGCTCCAAGAATTCTATTAAAATTTAAATAAGCCATGGCTCCTGGAAGCAGTACCTGCAAAGAAGTTGCCGATTCTCACCCTTCAGTTTCTGGTCATGACATAGCAATGTCTAAATCAGAGAATAATTCTACATCTTCAAAAGTCCTACTTGGTCTGGGAGGGAAACTTGGTGTTTATTCAACCAATGGTGTGCAAGAATTGCTTGAGTGCCCTGTCTGCACAAACCTGATGTACCCTCCAATTTACCAGTGCCCGAATGGCCACACATTGTGCTCGAACTGCAAGATCAGAGTTAGCAACTCTTGCCCAACCTGTCGTCACGAACTTGGAAATATAAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTGGAAATCCCCTGCAGATACCAGAATTTGGGTTGTCAAGATATTTTTCCTTACTACAGTAAGCTTAAGCATGAGCAACACTGTCGATTCCGTCCGTACAACTGCCCTTATGCTGGATCAGAATGCTCGGTCACAGGCGACATTCCGTCTCTTGTTGCGCATCTCAAAGATGATCACAAGGTTGACATGCATGACGGGTGTACCTTCAATCATCGCTATGTGAAATCAAACCCACATGAAGTCGAAAATGCCACGTGGATGCTAACGGTTTTCAACTGCTTTGGAAGGCAGTTCTGCTTGCATTTCGAGGCGTTCCAGCTAGGAATGGCACCTGTTTACATGGCATTTTTACGATTCATGGGTGACGATAATGAAGCAAAGAAGTTCAGCTACAGTTTGGAAGTGGGTGGCAACGGGCGTAAACTGATATGGCAAGGAATTCCGAGGGGCATCCGCGACAGTCACCGAAAAGTTCGTGACAGTCAAGATGGTCTCATCATTCAAAGAAACCTGGCACTGTATTTTTCAGGAGGGGAAAGGCAAGAGCTGAAACTGAGAATCACGGGTCGAATATGGAAAGAAGAATGAGATCAAGGAACCACGCTCTGTGTTGTTGAGGTGAATGTATTATTGTACAGTTAAAACAAGTTTGTTAGCCAACAGCTGGGGTTTGCTCCAATTGCTGGAGAAGCTTTTGGAGAAACATCCAAGCTAATATAAAAAAATGTAATTTACCAAATGAATCAAAAAAAAACATTTTGCTGCCTCATGTTTTATGTATTTAAAAGCCAAGTTTCTCC ATGGCTCCTGGAAGCAGTACCTGCAAAGAAGTTGCCGATTCTCACCCTTCAGTTTCTGGTCATGACATAGCAATGTCTAAATCAGAGAATAATTCTACATCTTCAAAAGTCCTACTTGGTCTGGGAGGGAAACTTGGTGTTTATTCAACCAATGGTGTGCAAGAATTGCTTGAGTGCCCTGTCTGCACAAACCTGATGTACCCTCCAATTTACCAGTGCCCGAATGGCCACACATTGTGCTCGAACTGCAAGATCAGAGTTAGCAACTCTTGCCCAACCTGTCGTCACGAACTTGGAAATATAAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTGGAAATCCCCTGCAGATACCAGAATTTGGGTTGTCAAGATATTTTTCCTTACTACAGTAAGCTTAAGCATGAGCAACACTGTCGATTCCGTCCGTACAACTGCCCTTATGCTGGATCAGAATGCTCGGTCACAGGCGACATTCCGTCTCTTGTTGCGCATCTCAAAGATGATCACAAGGTTGACATGCATGACGGGTGTACCTTCAATCATCGCTATGTGAAATCAAACCCACATGAAGTCGAAAATGCCACGTGGATGCTAACGGTTTTCAACTGCTTTGGAAGGCAGTTCTGCTTGCATTTCGAGGCGTTCCAGCTAGGAATGGCACCTGTTTACATGGCATTTTTACGATTCATGGGTGACGATAATGAAGCAAAGAAGTTCAGCTACAGTTTGGAAGTGGGTGGCAACGGGCGTAAACTGATATGGCAAGGAATTCCGAGGGGCATCCGCGACAGTCACCGAAAAGTTCGTGACAGTCAAGATGGTCTCATCATTCAAAGAAACCTGGCACTGTATTTTTCAGGAGGGGAAAGGCAAGAGCTGAAACTGAGAATCACGGGTCGAATATGGAAAGAAGAATGA MAPGSSTCKEVADSHPSVSGHDIAMSKSENNSTSSKVLLGLGGKLGVYSTNGVQELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPTCRHELGNIRCLALEKVAESLEIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKKFSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRITGRIWKEE Homology
BLAST of Tan0017649.2 vs. ExPASy Swiss-Prot
Match: Q9M2P4 (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=1 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 1.9e-156 Identity = 256/308 (83.12%), Postives = 277/308 (89.94%), Query Frame = 0
BLAST of Tan0017649.2 vs. ExPASy Swiss-Prot
Match: P93748 (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana OX=3702 GN=SINAT1 PE=1 SV=1) HSP 1 Score: 541.2 bits (1393), Expect = 7.6e-153 Identity = 251/307 (81.76%), Postives = 275/307 (89.58%), Query Frame = 0
BLAST of Tan0017649.2 vs. ExPASy Swiss-Prot
Match: Q10L91 (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 2.3e-133 Identity = 212/264 (80.30%), Postives = 236/264 (89.39%), Query Frame = 0
BLAST of Tan0017649.2 vs. ExPASy Swiss-Prot
Match: Q84JL3 (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 1.5e-132 Identity = 218/294 (74.15%), Postives = 248/294 (84.35%), Query Frame = 0
BLAST of Tan0017649.2 vs. ExPASy Swiss-Prot
Match: Q9STN8 (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=1 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 3.1e-130 Identity = 210/303 (69.31%), Postives = 246/303 (81.19%), Query Frame = 0
BLAST of Tan0017649.2 vs. NCBI nr
Match: XP_022928730.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata] >XP_022928731.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata] >XP_022928732.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata] >XP_022928733.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata] >XP_022928734.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 640.6 bits (1651), Expect = 7.0e-180 Identity = 300/307 (97.72%), Postives = 301/307 (98.05%), Query Frame = 0
BLAST of Tan0017649.2 vs. NCBI nr
Match: XP_038881778.1 (E3 ubiquitin-protein ligase SINAT2-like [Benincasa hispida] >XP_038881779.1 E3 ubiquitin-protein ligase SINAT2-like [Benincasa hispida]) HSP 1 Score: 640.2 bits (1650), Expect = 9.2e-180 Identity = 297/307 (96.74%), Postives = 302/307 (98.37%), Query Frame = 0
BLAST of Tan0017649.2 vs. NCBI nr
Match: XP_022967856.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita maxima] >XP_023543585.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543586.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543587.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 639.0 bits (1647), Expect = 2.0e-179 Identity = 299/307 (97.39%), Postives = 301/307 (98.05%), Query Frame = 0
BLAST of Tan0017649.2 vs. NCBI nr
Match: KAG6603259.1 (E3 ubiquitin-protein ligase SINAT2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033559.1 E3 ubiquitin-protein ligase SINAT2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 636.7 bits (1641), Expect = 1.0e-178 Identity = 298/307 (97.07%), Postives = 300/307 (97.72%), Query Frame = 0
BLAST of Tan0017649.2 vs. NCBI nr
Match: XP_023518392.1 (E3 ubiquitin-protein ligase SINAT2-like [Cucurbita pepo subsp. pepo] >XP_023518393.1 E3 ubiquitin-protein ligase SINAT2-like [Cucurbita pepo subsp. pepo] >KAG6595627.1 E3 ubiquitin-protein ligase SINAT2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027600.1 E3 ubiquitin-protein ligase SINAT2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 636.3 bits (1640), Expect = 1.3e-178 Identity = 299/307 (97.39%), Postives = 302/307 (98.37%), Query Frame = 0
BLAST of Tan0017649.2 vs. ExPASy TrEMBL
Match: A0A6J1ESE8 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111435553 PE=3 SV=1) HSP 1 Score: 640.6 bits (1651), Expect = 3.4e-180 Identity = 300/307 (97.72%), Postives = 301/307 (98.05%), Query Frame = 0
BLAST of Tan0017649.2 vs. ExPASy TrEMBL
Match: A0A6J1HT85 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111467239 PE=3 SV=1) HSP 1 Score: 639.0 bits (1647), Expect = 9.9e-180 Identity = 299/307 (97.39%), Postives = 301/307 (98.05%), Query Frame = 0
BLAST of Tan0017649.2 vs. ExPASy TrEMBL
Match: A0A6J1EBG4 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111432512 PE=3 SV=1) HSP 1 Score: 636.0 bits (1639), Expect = 8.4e-179 Identity = 298/307 (97.07%), Postives = 302/307 (98.37%), Query Frame = 0
BLAST of Tan0017649.2 vs. ExPASy TrEMBL
Match: A0A6J1HS09 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111466063 PE=3 SV=1) HSP 1 Score: 632.5 bits (1630), Expect = 9.3e-178 Identity = 298/307 (97.07%), Postives = 301/307 (98.05%), Query Frame = 0
BLAST of Tan0017649.2 vs. ExPASy TrEMBL
Match: A0A6J1DL03 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111022066 PE=3 SV=1) HSP 1 Score: 623.6 bits (1607), Expect = 4.3e-175 Identity = 293/315 (93.02%), Postives = 299/315 (94.92%), Query Frame = 0
BLAST of Tan0017649.2 vs. TAIR 10
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2 ) HSP 1 Score: 553.1 bits (1424), Expect = 1.4e-157 Identity = 256/308 (83.12%), Postives = 277/308 (89.94%), Query Frame = 0
BLAST of Tan0017649.2 vs. TAIR 10
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains ) HSP 1 Score: 541.2 bits (1393), Expect = 5.4e-154 Identity = 251/307 (81.76%), Postives = 275/307 (89.58%), Query Frame = 0
BLAST of Tan0017649.2 vs. TAIR 10
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains ) HSP 1 Score: 473.8 bits (1218), Expect = 1.1e-133 Identity = 218/294 (74.15%), Postives = 248/294 (84.35%), Query Frame = 0
BLAST of Tan0017649.2 vs. TAIR 10
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains ) HSP 1 Score: 466.1 bits (1198), Expect = 2.2e-131 Identity = 210/303 (69.31%), Postives = 246/303 (81.19%), Query Frame = 0
BLAST of Tan0017649.2 vs. TAIR 10
Match: AT5G53360.1 (TRAF-like superfamily protein ) HSP 1 Score: 367.1 bits (941), Expect = 1.4e-101 Identity = 161/204 (78.92%), Postives = 184/204 (90.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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