Tan0009717.2 (mRNA) Snake gourd v1

Overview
NameTan0009717.2
TypemRNA
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFAR1 family protein
LocationLG06: 11439993 .. 11443239 (+)
Sequence length3093
RNA-Seq ExpressionTan0009717.2
SyntenyTan0009717.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAGGCTGGACGGTGTCAGTGAACACACTGTAATTTTCACTCGACTGTTTGCCATTTTGGTTGGACTCATTCATGGAAGTTTTTCAGGGTTTAGTCCAAACTTCGTAACCCTCACTCTCATGCCGAAAGAACCACCCAAAAATCTCGATTTCAACGACCCCAGAAGCTTCTCGATTCACGATTCACACTACAACCACCGGAAAACACCGAAGAAATGAGATTGGAACCCGAAGAATTTGCGGCGTCGAATGCAATTCGAATAATCAAGGAACCGTGAATCCCAAGATAGGGACGAATCAAAGTAAGTTTCTCGAATTCCGCATTCTTGAGATTTTCCTGATGTTGATCGCCATGCATTTCTACCATTCTCGCTTCAATTCTTCGATGTAGTATCTATTTCTGTTTACATATTTGACGAATTCAGAAAAATTCGGCTTGTTTTCAATTTCTGGTAGTGGATGGAATCCCCACTGTGGTCGAGGATGGGGATGTTGTAGAAAACCCTAGAGGGAAGGATTTGGTCAGAGTAGTTGCTGAAGCTGAGGCGAGAGCGACCGATATTTCAGATACAGAGCCATGTGTAGGTATGGAGTTTGAATCTGAGGAGTCTGCCAAGGTTTTCTACGATGCTTATGCTTCACGCCTTGGTTTTATTATGCGCGTTGATGCATTTCGTCGGTCGATGCGTGATGGTGCGGTTGTTTGGCGTCGACTTGTTTGTAATAAAGAGGGGTTTCGCAAGTTGAGGCCCAAAAGAAGTGAAAATAGGAAGCCTCGAGCTATAACAAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAGAAAACTGGAAAATGGGTTGTAACGAAATTCGTCAAGGATCACAATCATCCACTGATTGTTACTCCTGCCAGTGCTCGTCGAAACGTTCTCCTATCCCTGACACGGGTAAGGGCTACTTTGATTTTGATACACTTTGTGTTCATTTATTCTGGAATGATGTTTGTTCTAGTTTCATCTTTGCCCTTAAGTTTCACTTTGTGTACCTCTATTCTGGAATTATATCTGTCCTGGTCTTCATCTTGGCCCTTAACAATAGAACCTGAAAAATTGAAGCCTGAGAATGTGAGGGGAACTCGAAGCATAGAAATTCAGATGTCTATGTTTGGTATGAAGGAATAGGATAGCTAGAATTCAGGTGTCAAATAAGTGTTGAGTTTGTTGTTTCAAGTTTGTGGACTAGAATGTGAAATTATATATTCTTCAATGAATTAGGGAAGCACTTCTTCTTCCGAGTCCAGGCCTTGGGAAGGGCACGGGTACCCGGGGTATAGTGGAGCAAAGCTTCGACTCCAGGTTATCAAAAAAAAAAAAATTAGGGAAGCGAAAATTAGCCTTTCTGAATTACTTATCATTTGTTAGTTCATGTAAGTTTATGCATTGATATTGAGCAAATCTACTGGAGGTCCTTTGCATACTTATGTCGTCCAAGAAACAACCCCTTTTCGACGTGCCCTACCTTTGGTCCAATTGATATACTTTAGATTTCCAAATTCCTTCATTTCAAAACAAACAAATAAGTACCATTTTATTTGTTGAATTTCATGGCCTTTGTTATGATCAGATCATCCACGTAGACTAATATGATTGTGACCTCTAACTCTCCCTTTCATAAATAAGTTGGAATCGACCAGAGCCACTGTATAGCTACTCTAGACTAGAAAATTTTCAATCATGAAGGTCTATAGTCTTAAGAGTGTGTGATAGGGAGGGTCCTGCTTGTAATGGGATTTATTTTTTGTTTTGTATTTCTATGGGGTCCAGGTATAGTAGTTAGTCTAGGCTGCTTTGCTGTTAAGGGGAGTGTATAGAGGTAATGGATTCTGGTGGAGGGTATGCTTTTGGCAATTATTTAACTTGTGCGCAAAAGAGCTCTCGAATCTCCCTCTGCTTATACCTTCCTAATACTTGAATAAACTGGTTTCTATCATTGTAACCCTGTTTCTTTTTTGTTCTTATTTGCCGAACAATAAACACGCGTTGAAATTTGAAGCAATTTTGGAGAAATGACATTTGGAAATAAGTCTTGAAATATTTATTTTAGATTTCCTACTCGATGATTTACAAATTTTTTACGTGTGAATGAAGATGAAGGATGAAGTTATTATTTTGCCTTCACACACTTTTACATCTGGCTGGCTGCCTCTTCATTCTTGCAAAGAACGCATCAACTTAGTGAAAGCTAACAGAAGGAAACTCCTCCTTCCCAAAGTATCACTAGTGTTGATCCCCTGAAGAAGAGGTTACTAAATTGCTCTTGTTAAATGCTTGGGGTATTACGATGTTTGAATCAATATGGATGAGGTTTAGTGATAGTTTTTTTATTAGCATGTTTATGGAATCCTCTTTTTGTGAGCATAGTGAAATGGCTATTGAAAAAAATGAATGGGTTGAAATTTAACTTAGAGAGTGGGAAAAGCCGAACAAAGCAACATAATGAGTGTCAACTTGAGCATAGTTAAGTGAATCAACACTTATTACTTCCCCTTAACGTTGAAGATTCAATCTCCAACCTCCCACATTTGTAGTACTCGAAACAACCAAATGGACAAAGGTGTCCATTTTCCTAAGGAGGGTCAAACAAAAGGCGTCCAATCCACATGGATAAGAAAAGTTTTCGAGTAGTCAAAAGAAGAACGCTCGAGTATTCCAATGTAAATAAAGAGGGAAATCTCTTGATTTTCTTTATCCTTTTGCTGCCTCTGCTCTCAACCATAGTGTACGAGATGCGTAGTTTATATATTTCCATGTTTCTGTTATTATTATTTCAGGATGAGAAAGATGCGAAAATTCGAGAATTAACTGCCGAACTACACCGAGAACGAAAGCGATGTGCAGCTTATCAAGAACAGCTTGTCATGATTTTAAGAGACATGGAGGAGCACTCGAATCATCTAGCAAGAAACATAGATGACATTGTTCAAAGTGTGAAAGATATTGAATCAAAAAAGTAAAAACAATTCAATTTCAAATACCTAACCACAGAATCCAAAGAAGAAATATATTTGTTTTTGTAAAAATTGTCTAGCATAACTGATTATAGTTCAGACTTAAATTTGTTCATTAGTCGCGCCCTTTTCCCTCTTATTAGGTGGTGTCTTTTATGGTTAAGGGAAATAAAAGTTTTTAAGAGCTAAATAGGTGTTTTTAAGCACTTTGATAATCTGCTGCGGCAATATTATAATTCAAATTAGATAATTGAG

mRNA sequence

GGAAGGCTGGACGGTGTCAGTGAACACACTGTAATTTTCACTCGACTGTTTGCCATTTTGGTTGGACTCATTCATGGAAGTTTTTCAGGGTTTAGTCCAAACTTCGTAACCCTCACTCTCATGCCGAAAGAACCACCCAAAAATCTCGATTTCAACGACCCCAGAAGCTTCTCGATTCACGATTCACACTACAACCACCGGAAAACACCGAAGAAATGAGATTGGAACCCGAAGAATTTGCGGCGTCGAATGCAATTCGAATAATCAAGGAACCGTGAATCCCAAGATAGGGACGAATCAAATGGATGGAATCCCCACTGTGGTCGAGGATGGGGATGTTGTAGAAAACCCTAGAGGGAAGGATTTGGTCAGAGTAGTTGCTGAAGCTGAGGCGAGAGCGACCGATATTTCAGATACAGAGCCATGTGTAGGTATGGAGTTTGAATCTGAGGAGTCTGCCAAGGTTTTCTACGATGCTTATGCTTCACGCCTTGGTTTTATTATGCGCGTTGATGCATTTCGTCGGTCGATGCGTGATGGTGCGGTTGTTTGGCGTCGACTTGTTTGTAATAAAGAGGGGTTTCGCAAGTTGAGGCCCAAAAGAAGTGAAAATAGGAAGCCTCGAGCTATAACAAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAGAAAACTGGAAAATGGGTTGTAACGAAATTCGTCAAGGATCACAATCATCCACTGATTGTTACTCCTGCCAGTGCTCGTCGAAACGTTCTCCTATCCCTGACACGGGTAAGGGCTACTTTGATTTTGATACACTTTGTGTTCATTTATTCTGGAATGATGTTTGTTCTAGTTTCATCTTTGCCCTTAAGTTTCACTTTGTGTACCTCTATTCTGGAATTATATCTGTCCTGGTCTTCATCTTGGCCCTTAACAATAGAACCTGAAAAATTGAAGCCTGAGAATGTGAGGGGAACTCGAAGCATAGAAATTCAGATGTCTATGTTTGGTATGAAGGAATAGGATAGCTAGAATTCAGGTGTCAAATAAGTGTTGAGTTTGTTGTTTCAAGTTTGTGGACTAGAATGTGAAATTATATATTCTTCAATGAATTAGGGAAGCACTTCTTCTTCCGAGTCCAGGCCTTGGGAAGGGCACGGGTACCCGGGGTATAGTGGAGCAAAGCTTCGACTCCAGGTTATCAAAAAAAAAAAAATTAGGGAAGCGAAAATTAGCCTTTCTGAATTACTTATCATTTGTTAGTTCATGTAAGTTTATGCATTGATATTGAGCAAATCTACTGGAGGTCCTTTGCATACTTATGTCGTCCAAGAAACAACCCCTTTTCGACGTGCCCTACCTTTGGTCCAATTGATATACTTTAGATTTCCAAATTCCTTCATTTCAAAACAAACAAATAAGTACCATTTTATTTGTTGAATTTCATGGCCTTTGTTATGATCAGATCATCCACGTAGACTAATATGATTGTGACCTCTAACTCTCCCTTTCATAAATAAGTTGGAATCGACCAGAGCCACTGTATAGCTACTCTAGACTAGAAAATTTTCAATCATGAAGGTCTATAGTCTTAAGAGTGTGTGATAGGGAGGGTCCTGCTTGTAATGGGATTTATTTTTTGTTTTGTATTTCTATGGGGTCCAGGTATAGTAGTTAGTCTAGGCTGCTTTGCTGTTAAGGGGAGTGTATAGAGGTAATGGATTCTGGTGGAGGGTATGCTTTTGGCAATTATTTAACTTGTGCGCAAAAGAGCTCTCGAATCTCCCTCTGCTTATACCTTCCTAATACTTGAATAAACTGGTTTCTATCATTGTAACCCTGTTTCTTTTTTGTTCTTATTTGCCGAACAATAAACACGCGTTGAAATTTGAAGCAATTTTGGAGAAATGACATTTGGAAATAAGTCTTGAAATATTTATTTTAGATTTCCTACTCGATGATTTACAAATTTTTTACGTGTGAATGAAGATGAAGGATGAAGTTATTATTTTGCCTTCACACACTTTTACATCTGGCTGGCTGCCTCTTCATTCTTGCAAAGAACGCATCAACTTAGTGAAAGCTAACAGAAGGAAACTCCTCCTTCCCAAAGTATCACTAGTGTTGATCCCCTGAAGAAGAGGTTACTAAATTGCTCTTGTTAAATGCTTGGGGTATTACGATGTTTGAATCAATATGGATGAGGTTTAGTGATAGTTTTTTTATTAGCATGTTTATGGAATCCTCTTTTTGTGAGCATAGTGAAATGGCTATTGAAAAAAATGAATGGGTTGAAATTTAACTTAGAGAGTGGGAAAAGCCGAACAAAGCAACATAATGAGTGTCAACTTGAGCATAGTTAAGTGAATCAACACTTATTACTTCCCCTTAACGTTGAAGATTCAATCTCCAACCTCCCACATTTGTAGTACTCGAAACAACCAAATGGACAAAGGTGTCCATTTTCCTAAGGAGGGTCAAACAAAAGGCGTCCAATCCACATGGATAAGAAAAGTTTTCGAGTAGTCAAAAGAAGAACGCTCGAGTATTCCAATGTAAATAAAGAGGGAAATCTCTTGATTTTCTTTATCCTTTTGCTGCCTCTGCTCTCAACCATAGTGTACGAGATGCGTAGTTTATATATTTCCATGTTTCTGTTATTATTATTTCAGGATGAGAAAGATGCGAAAATTCGAGAATTAACTGCCGAACTACACCGAGAACGAAAGCGATGTGCAGCTTATCAAGAACAGCTTGTCATGATTTTAAGAGACATGGAGGAGCACTCGAATCATCTAGCAAGAAACATAGATGACATTGTTCAAAGTGTGAAAGATATTGAATCAAAAAAGTAAAAACAATTCAATTTCAAATACCTAACCACAGAATCCAAAGAAGAAATATATTTGTTTTTGTAAAAATTGTCTAGCATAACTGATTATAGTTCAGACTTAAATTTGTTCATTAGTCGCGCCCTTTTCCCTCTTATTAGGTGGTGTCTTTTATGGTTAAGGGAAATAAAAGTTTTTAAGAGCTAAATAGGTGTTTTTAAGCACTTTGATAATCTGCTGCGGCAATATTATAATTCAAATTAGATAATTGAG

Coding sequence (CDS)

ATGGATGGAATCCCCACTGTGGTCGAGGATGGGGATGTTGTAGAAAACCCTAGAGGGAAGGATTTGGTCAGAGTAGTTGCTGAAGCTGAGGCGAGAGCGACCGATATTTCAGATACAGAGCCATGTGTAGGTATGGAGTTTGAATCTGAGGAGTCTGCCAAGGTTTTCTACGATGCTTATGCTTCACGCCTTGGTTTTATTATGCGCGTTGATGCATTTCGTCGGTCGATGCGTGATGGTGCGGTTGTTTGGCGTCGACTTGTTTGTAATAAAGAGGGGTTTCGCAAGTTGAGGCCCAAAAGAAGTGAAAATAGGAAGCCTCGAGCTATAACAAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAGAAAACTGGAAAATGGGTTGTAACGAAATTCGTCAAGGATCACAATCATCCACTGATTGTTACTCCTGCCAGTGCTCGTCGAAACGTTCTCCTATCCCTGACACGGGTAAGGGCTACTTTGATTTTGATACACTTTGTGTTCATTTATTCTGGAATGATGTTTGTTCTAGTTTCATCTTTGCCCTTAAGTTTCACTTTGTGTACCTCTATTCTGGAATTATATCTGTCCTGGTCTTCATCTTGGCCCTTAACAATAGAACCTGAAAAATTGAAGCCTGAGAATGTGAGGGGAACTCGAAGCATAGAAATTCAGATGTCTATGTTTGGTATGAAGGAATAG

Protein sequence

MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTRVRATLILIHFVFIYSGMMFVLVSSLPLSFTLCTSILELYLSWSSSWPLTIEPEKLKPENVRGTRSIEIQMSMFGMKE
Homology
[Close]
BLAST of Tan0009717.2 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.8e-30
Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 0 

Query: 8   VEDGDVVEN---PRGKDLV----RVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 67
           ++D D++++   P G  LV          E  A D+ D EP  G+EFESEE+AK FY++Y
Sbjct: 33  LDDDDMLDSPIMPCGNGLVGNSGNYFPNQEEEACDLLDLEPYDGLEFESEEAAKAFYNSY 92

Query: 68  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENR---KPRAITREGCKA 127
           A R+GF  RV + RRS RDGA++ R+ VC KEGFR +  KR+++R   +PR ITR GCKA
Sbjct: 93  ARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKA 152

Query: 128 MVVVKKEKTGKWVVTKFVKDHNHPLI 144
            + VK + +GKW+V+ FVKDHNH L+
Sbjct: 153 SLSVKMQDSGKWLVSGFVKDHNHELV 178

[Close]
BLAST of Tan0009717.2 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 45/116 (38.79%), Postives = 61/116 (52.59%), Query Frame = 0 

Query: 27  AEAEARATDISDTEPCVGMEFESEESAKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRR 86
           AE     T    TEP  G+EF S   A  FY AYA  +GF +R+    RS  DG++  RR
Sbjct: 176 AEDSDGQTQPKATEPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRR 235

Query: 87  LVCNKEGFRKLRPKRSENRKPRAITREGCKAMVVVKKEKTGKWVVTKFVKDHNHPL 143
            VC+KEGF+               +R GC A + +K++ +G W+V +  KDHNH L
Sbjct: 236 FVCSKEGFQH-------------PSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 278

[Close]
BLAST of Tan0009717.2 vs. ExPASy Swiss-Prot
Match: Q3E7I5 (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.7e-14
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 0 

Query: 32  RATDISDTEPCVGMEFESEESAKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNK 91
           +A  ++ TEP  G+EF S   A  FY AYA  +GF +R+    RS  DG++  RR VC++
Sbjct: 202 QAKAVTGTEPYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSR 261

Query: 92  EGFRKLRPKRSENRKPRAITREGCKAMVVVKKEKTGKWVVTKFVKDHNHPL 143
           EGF+               +R GC A + +K++ +G W+V +  KDHNH L
Sbjct: 262 EGFQH-------------PSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 299

[Close]
BLAST of Tan0009717.2 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-13
Identity = 47/108 (43.52%), Postives = 60/108 (55.56%), Query Frame = 0 

Query: 35  DISDTEPCVGMEFESEESAKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGF 94
           +I   EPCVGMEF SE+ AK FYD Y+ +LGF  ++        DG+V  R  VC+    
Sbjct: 43  EIGIAEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKL----LPRTDGSVSVREFVCSSSS- 102

Query: 95  RKLRPKRSENRKPRAITREGCKAMVVVKKEKTGKWVVTKFVKDHNHPL 143
                KRS+ R       E C AMV ++ +   KWVVTKFVK+H H L
Sbjct: 103 -----KRSKRR-----LSESCDAMVRIELQGHEKWVVTKFVKEHTHGL 135

[Close]
BLAST of Tan0009717.2 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.5e-11
Identity = 54/198 (27.27%), Postives = 95/198 (47.98%), Query Frame = 0 

Query: 12  DVVENPRGKDLVRVVAE----AEARATDISDTEPCVGMEFESEESAKVFYDAYASRLGFI 71
           D+V  P     + +V E     +   +   D EP  G++F++ E+A +FY  YA  +GF 
Sbjct: 18  DIVVEPHSNRDIGIVDEFNIGGDVGFSGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFT 77

Query: 72  MRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVVVKKEKTG 131
             +   RRS +    +  +  C++ G          + +   + +  CKA + VK+   G
Sbjct: 78  TSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSSSRRSTVKKTDCKASMHVKRRPDG 137

Query: 132 KWVVTKFVKDHNHPLIVTPASA-----RRNVLLSLTRVRATLILIHFVFIYSGMMFVLVS 191
           KW++ +FVKDHNH L+  PA A     +RNV L+    +  + ++H V   +  M+V +S
Sbjct: 138 KWIIHEFVKDHNHELL--PALAYHFRIQRNVKLA---EKNNIDILHAVSERTKKMYVEMS 197

Query: 192 SLPLSFTLCTSILELYLS 201
                +    S+L+  +S
Sbjct: 198 RQSGGYKNIGSLLQTDVS 210

[Close]
BLAST of Tan0009717.2 vs. NCBI nr
Match: XP_038897039.1 (protein FAR1-RELATED SEQUENCE 5 isoform X1 [Benincasa hispida] >XP_038897041.1 protein FAR1-RELATED SEQUENCE 5 isoform X1 [Benincasa hispida])

HSP 1 Score: 291.2 bits (744), Expect = 8.0e-75
Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           MDGIPTV+EDGDVVENP GKD  RVVAEAEA AT+ SDTEP VGMEFESEESAKVFYDAY
Sbjct: 1   MDGIPTVLEDGDVVENPNGKDFARVVAEAEAIATNNSDTEPFVGMEFESEESAKVFYDAY 60

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV
Sbjct: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTR 160
           VKK+K+GKWVVTKFVKDHNHPLI+TPASARRNVLLS TR
Sbjct: 121 VKKDKSGKWVVTKFVKDHNHPLILTPASARRNVLLSHTR 159

[Close]
BLAST of Tan0009717.2 vs. NCBI nr
Match: XP_022991203.1 (protein FAR1-RELATED SEQUENCE 5 [Cucurbita maxima])

HSP 1 Score: 290.8 bits (743), Expect = 1.1e-74
Identity = 144/159 (90.57%), Postives = 152/159 (95.60%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           MDGIPT +EDGDVVENP GK LVR+V+EAEA AT+ISDTEP VGMEFESEESAKVFYDAY
Sbjct: 1   MDGIPTAIEDGDVVENPSGKPLVRIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAY 60

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           ASRLGFI+RVDAFRRSMRDG+VVWRRLVCNKEGFRK RPKRSENRKPRAITREGCKAMVV
Sbjct: 61  ASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVV 120

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTR 160
           VKKEKTGKW+VTKFVKDHNHPLIVTPASARRN+LLS TR
Sbjct: 121 VKKEKTGKWIVTKFVKDHNHPLIVTPASARRNILLSQTR 159

[Close]
BLAST of Tan0009717.2 vs. NCBI nr
Match: XP_023547555.1 (protein FAR1-RELATED SEQUENCE 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.7 bits (735), Expect = 8.9e-74
Identity = 143/159 (89.94%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           MDGIPT +EDGDVVENP GK L R+V+EAEA AT+ISDTEP VGMEFESEESAKVFYDAY
Sbjct: 1   MDGIPTAIEDGDVVENPSGKPLARIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAY 60

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           ASRLGFI+RVDAFRRSMRDG+VVWRRLVCNKEGFRK RPKRSENRKPRAITREGCKAMVV
Sbjct: 61  ASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVV 120

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTR 160
           VKKEK+GKW+VTKFVKDHNHPLIVTPASARRNVLLS TR
Sbjct: 121 VKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSHTR 159

[Close]
BLAST of Tan0009717.2 vs. NCBI nr
Match: KAG6576034.1 (AUGMIN subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-73
Identity = 141/159 (88.68%), Postives = 151/159 (94.97%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           +DGIPT +EDGDVVENP GK L R+V+EAEA AT+ISDTEP VGMEFESEESAKVFYDAY
Sbjct: 82  VDGIPTAIEDGDVVENPSGKPLARIVSEAEATATNISDTEPYVGMEFESEESAKVFYDAY 141

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           ASRLGF++RVDAFRRSMRDG+VVWRRLVCNKEGFRK RPKRSENRKPRAITREGCKAMVV
Sbjct: 142 ASRLGFVIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVV 201

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTR 160
           VKKEK+GKW+VTKFVKDHNHPLIVTPASARRNVLLS TR
Sbjct: 202 VKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSQTR 240

[Close]
BLAST of Tan0009717.2 vs. NCBI nr
Match: KAG7014556.1 (Protein FAR1-RELATED SEQUENCE 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286.2 bits (731), Expect = 2.6e-73
Identity = 141/159 (88.68%), Postives = 150/159 (94.34%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           +DGIPT +EDGDVVENP GK   R+V+EAEA AT+ISDTEP VGMEFESEESAKVFYDAY
Sbjct: 120 VDGIPTAIEDGDVVENPSGKPSARIVSEAEATATNISDTEPYVGMEFESEESAKVFYDAY 179

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           ASRLGF++RVDAFRRSMRDG+VVWRRLVCNKEGFRK RPKRSENRKPRAITREGCKAMVV
Sbjct: 180 ASRLGFVIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVV 239

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTR 160
           VKKEKTGKW+VTKFVKDHNHPLIVTPASARRNVLLS TR
Sbjct: 240 VKKEKTGKWIVTKFVKDHNHPLIVTPASARRNVLLSQTR 278

[Close]
BLAST of Tan0009717.2 vs. ExPASy TrEMBL
Match: A0A6J1JVH7 (protein FAR1-RELATED SEQUENCE 5 OS=Cucurbita maxima OX=3661 GN=LOC111487929 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 5.1e-75
Identity = 144/159 (90.57%), Postives = 152/159 (95.60%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           MDGIPT +EDGDVVENP GK LVR+V+EAEA AT+ISDTEP VGMEFESEESAKVFYDAY
Sbjct: 1   MDGIPTAIEDGDVVENPSGKPLVRIVSEAEAIATNISDTEPYVGMEFESEESAKVFYDAY 60

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           ASRLGFI+RVDAFRRSMRDG+VVWRRLVCNKEGFRK RPKRSENRKPRAITREGCKAMVV
Sbjct: 61  ASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVV 120

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTR 160
           VKKEKTGKW+VTKFVKDHNHPLIVTPASARRN+LLS TR
Sbjct: 121 VKKEKTGKWIVTKFVKDHNHPLIVTPASARRNILLSQTR 159

[Close]
BLAST of Tan0009717.2 vs. ExPASy TrEMBL
Match: A0A6J1GPB7 (protein FAR1-RELATED SEQUENCE 5 OS=Cucurbita moschata OX=3662 GN=LOC111456290 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 2.1e-73
Identity = 140/159 (88.05%), Postives = 150/159 (94.34%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           +DGIPT +EDGD VENP GK L R+V+EAEA AT+ISDTEP VGMEFESEESAKVFYDAY
Sbjct: 81  VDGIPTAIEDGDAVENPSGKPLARIVSEAEATATNISDTEPYVGMEFESEESAKVFYDAY 140

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           ASRLGF++RVDAFRRSMRDG+VVWRRLVCNKEGFRK RPKRSENRKPRAITREGCKAMVV
Sbjct: 141 ASRLGFVIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKRSENRKPRAITREGCKAMVV 200

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTR 160
           VKKEK+GKW+VTKFVKDHNHPLIVTPASARRNVLLS TR
Sbjct: 201 VKKEKSGKWIVTKFVKDHNHPLIVTPASARRNVLLSQTR 239

[Close]
BLAST of Tan0009717.2 vs. ExPASy TrEMBL
Match: A0A1S3BGE3 (protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489731 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.8e-70
Identity = 140/159 (88.05%), Postives = 146/159 (91.82%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           MDGIPTVV   DVVE+P GKD  RVV EAEA  +++SDTEP VGMEFESEES KVFYDAY
Sbjct: 1   MDGIPTVV---DVVEDPSGKDFARVVTEAEAITSNLSDTEPFVGMEFESEESVKVFYDAY 60

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRK +PKRSENRKPRA+TREGCKAMVV
Sbjct: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVV 120

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTR 160
           VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLS TR
Sbjct: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTR 156

[Close]
BLAST of Tan0009717.2 vs. ExPASy TrEMBL
Match: A0A0A0KA59 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372900 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.0e-67
Identity = 136/159 (85.53%), Postives = 144/159 (90.57%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           MDGIP+V+   +VVE+P GKD  R V EAEA  ++ SDTEP VGMEFESEES KVFYDAY
Sbjct: 1   MDGIPSVL---NVVEDPSGKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAY 60

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRK +PKRSENRKPRA+TREGCKAMVV
Sbjct: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVV 120

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTR 160
           VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLS TR
Sbjct: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTR 156

[Close]
BLAST of Tan0009717.2 vs. ExPASy TrEMBL
Match: A0A2I4EFQ2 (protein FAR1-RELATED SEQUENCE 7 OS=Juglans regia OX=51240 GN=LOC108989159 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 8.7e-59
Identity = 120/159 (75.47%), Postives = 136/159 (85.53%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATD-ISDTEPCVGMEFESEESAKVFYDA 60
           MD  P++ EDGD++E+  GK+L+          TD  SD EP VGMEFESEE+AKVFYDA
Sbjct: 1   MDEHPSMSEDGDMIESSNGKELL---------TTDGSSDIEPYVGMEFESEEAAKVFYDA 60

Query: 61  YASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMV 120
           YA+RLGFIMRVDAFRRSMRDG VVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAM+
Sbjct: 61  YATRLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMI 120

Query: 121 VVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLT 159
           VVKKEKTGKW+VT+FVK+HNHPL+ TPA+ RR+VLLS T
Sbjct: 121 VVKKEKTGKWLVTRFVKEHNHPLVATPANGRRSVLLSQT 150

[Close]
BLAST of Tan0009717.2 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 185.7 bits (470), Expect = 4.4e-47
Identity = 94/158 (59.49%), Postives = 119/158 (75.32%), Query Frame = 0 

Query: 1   MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 60
           M+G     ED +++EN    D+++ V +  +        EP +GMEFESEE+AK FYD Y
Sbjct: 1   MEGNSLPEEDVEMMEN---SDVMKTVTDEASPM-----VEPFIGMEFESEEAAKSFYDNY 60

Query: 61  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVV 120
           A+ +GF+MRVDAFRRSMRDG VVWRRLVCNKEGFR+ RP+RSE+RKPRAITREGCKA++V
Sbjct: 61  ATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRSRPRRSESRKPRAITREGCKALIV 120

Query: 121 VKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLT 159
           VK+EK+G W+VTKF K+HNHPL+    + RRN  L  T
Sbjct: 121 VKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLPQT 150

[Close]
BLAST of Tan0009717.2 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 135.6 bits (340), Expect = 5.3e-32
Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 0 

Query: 34  TDISDTEPCVGMEFESEESAKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEG 93
           TD    EP  G+ FESE++AK+FYD Y+ RLGF+MRV + RRS +DG ++ RR  CNKEG
Sbjct: 15  TDDFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEG 74

Query: 94  F-RKLRPKRSENRKPRAITREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRN 153
               +R K    RKPR  TREGCKAM+ VK +++GKWV+TKFVK+HNHPL+V+P  AR  
Sbjct: 75  HCVSIRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHT 134

[Close]
BLAST of Tan0009717.2 vs. TAIR 10
Match: AT4G38180.1 (FAR1-related sequence 5 )

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-31
Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 0 

Query: 8   VEDGDVVEN---PRGKDLV----RVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAY 67
           ++D D++++   P G  LV          E  A D+ D EP  G+EFESEE+AK FY++Y
Sbjct: 33  LDDDDMLDSPIMPCGNGLVGNSGNYFPNQEEEACDLLDLEPYDGLEFESEEAAKAFYNSY 92

Query: 68  ASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENR---KPRAITREGCKA 127
           A R+GF  RV + RRS RDGA++ R+ VC KEGFR +  KR+++R   +PR ITR GCKA
Sbjct: 93  ARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKA 152

Query: 128 MVVVKKEKTGKWVVTKFVKDHNHPLI 144
            + VK + +GKW+V+ FVKDHNH L+
Sbjct: 153 SLSVKMQDSGKWLVSGFVKDHNHELV 178

[Close]
BLAST of Tan0009717.2 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 65/126 (51.59%), Postives = 88/126 (69.84%), Query Frame = 0 

Query: 29  AEARATDISDTEPCVGMEFESEESAKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLV 88
           A A  T+    EP VG EFESE +A  FY+AYA+++GF++RV    RS  DG+ + R+LV
Sbjct: 58  AVADMTEAQGDEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLV 117

Query: 89  CNKEGFRKLRPKRSENRKPRAITREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPAS 148
           CNKEG+R L  KR +  + RA TR GCKAM++++KE +GKWV+TKFVK+HNH L+  P  
Sbjct: 118 CNKEGYR-LPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM--PGR 177

Query: 149 ARRNVL 155
            RR  +
Sbjct: 178 VRRGCI 180

[Close]
BLAST of Tan0009717.2 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 65/126 (51.59%), Postives = 88/126 (69.84%), Query Frame = 0 

Query: 29  AEARATDISDTEPCVGMEFESEESAKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLV 88
           A A  T+    EP VG EFESE +A  FY+AYA+++GF++RV    RS  DG+ + R+LV
Sbjct: 58  AVADMTEAQGDEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLV 117

Query: 89  CNKEGFRKLRPKRSENRKPRAITREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPAS 148
           CNKEG+R L  KR +  + RA TR GCKAM++++KE +GKWV+TKFVK+HNH L+  P  
Sbjct: 118 CNKEGYR-LPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM--PGR 177

Query: 149 ARRNVL 155
            RR  +
Sbjct: 178 VRRGCI 180

The following BLAST results are available for this feature:
BLAST of Tan0009717.2 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL82.8e-3048.63Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=... [more]
Q9M8J32.8e-1438.79Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=... [more]
Q3E7I53.7e-1437.84Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 S... [more]
Q9ZVC91.1e-1343.52Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=... [more]
Q9SWG38.5e-1127.27Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1... [more]
BLAST of Tan0009717.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038897039.18.0e-7592.45protein FAR1-RELATED SEQUENCE 5 isoform X1 [Benincasa hispida] >XP_038897041.1 p... [more]
XP_022991203.11.1e-7490.57protein FAR1-RELATED SEQUENCE 5 [Cucurbita maxima][more]
XP_023547555.18.9e-7489.94protein FAR1-RELATED SEQUENCE 5 [Cucurbita pepo subsp. pepo][more]
KAG6576034.11.5e-7388.68AUGMIN subunit 3, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7014556.12.6e-7388.68Protein FAR1-RELATED SEQUENCE 5 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Tan0009717.2 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JVH75.1e-7590.57protein FAR1-RELATED SEQUENCE 5 OS=Cucurbita maxima OX=3661 GN=LOC111487929 PE=4... [more]
A0A6J1GPB72.1e-7388.05protein FAR1-RELATED SEQUENCE 5 OS=Cucurbita moschata OX=3662 GN=LOC111456290 PE... [more]
A0A1S3BGE33.8e-7088.05protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A0A0KA591.0e-6785.53FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372900 PE=4 S... [more]
A0A2I4EFQ28.7e-5975.47protein FAR1-RELATED SEQUENCE 7 OS=Juglans regia OX=51240 GN=LOC108989159 PE=4 S... [more]
BLAST of Tan0009717.2 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07500.14.4e-4759.49Far-red impaired responsive (FAR1) family protein [more]
AT2G43280.15.3e-3256.20Far-red impaired responsive (FAR1) family protein [more]
AT4G38180.12.0e-3148.63FAR1-related sequence 5 [more]
AT3G59470.11.1e-2951.59Far-red impaired responsive (FAR1) family protein [more]
AT3G59470.21.1e-2951.59Far-red impaired responsive (FAR1) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004330FAR1 DNA binding domainPFAMPF03101FAR1coord: 56..143
e-value: 7.4E-33
score: 113.1
NoneNo IPR availablePANTHERPTHR46328FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATEDcoord: 29..157
NoneNo IPR availablePANTHERPTHR46328:SF14FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEINcoord: 29..157

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Tan0009717Tan0009717gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0009717.2-five_prime_utrTan0009717.2-five_prime_utr-LG06:11439993..11440293five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0009717.2-exonTan0009717.2-exon-LG06:11439993..11440294exon
Tan0009717.2-exonTan0009717.2-exon-LG06:11440449..11443239exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0009717.2-cdsTan0009717.2-cds-LG06:11440294..11440294CDS
Tan0009717.2-cdsTan0009717.2-cds-LG06:11440449..11441158CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0009717.2-three_prime_utrTan0009717.2-three_prime_utr-LG06:11441159..11443239three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Tan0009717.2Tan0009717.2-proteinpolypeptide