Tan0009717.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGGCTGGACGGTGTCAGTGAACACACTGTAATTTTCACTCGACTGTTTGCCATTTTGGTTGGACTCATTCATGGAAGTTTTTCAGGGTTTAGTCCAAACTTCGTAACCCTCACTCTCATGCCGAAAGAACCACCCAAAAATCTCGATTTCAACGACCCCAGAAGCTTCTCGATTCACGATTCACACTACAACCACCGGAAAACACCGAAGAAATGAGATTGGAACCCGAAGAATTTGCGGCGTCGAATGCAATTCGAATAATCAAGGAACCGTGAATCCCAAGATAGGGACGAATCAAAGTAAGTTTCTCGAATTCCGCATTCTTGAGATTTTCCTGATGTTGATCGCCATGCATTTCTACCATTCTCGCTTCAATTCTTCGATGTAGTATCTATTTCTGTTTACATATTTGACGAATTCAGAAAAATTCGGCTTGTTTTCAATTTCTGGTAGTGGATGGAATCCCCACTGTGGTCGAGGATGGGGATGTTGTAGAAAACCCTAGAGGGAAGGATTTGGTCAGAGTAGTTGCTGAAGCTGAGGCGAGAGCGACCGATATTTCAGATACAGAGCCATGTGTAGGTATGGAGTTTGAATCTGAGGAGTCTGCCAAGGTTTTCTACGATGCTTATGCTTCACGCCTTGGTTTTATTATGCGCGTTGATGCATTTCGTCGGTCGATGCGTGATGGTGCGGTTGTTTGGCGTCGACTTGTTTGTAATAAAGAGGGGTTTCGCAAGTTGAGGCCCAAAAGAAGTGAAAATAGGAAGCCTCGAGCTATAACAAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAGAAAACTGGAAAATGGGTTGTAACGAAATTCGTCAAGGATCACAATCATCCACTGATTGTTACTCCTGCCAGTGCTCGTCGAAACGTTCTCCTATCCCTGACACGGGTAAGGGCTACTTTGATTTTGATACACTTTGTGTTCATTTATTCTGGAATGATGTTTGTTCTAGTTTCATCTTTGCCCTTAAGTTTCACTTTGTGTACCTCTATTCTGGAATTATATCTGTCCTGGTCTTCATCTTGGCCCTTAACAATAGAACCTGAAAAATTGAAGCCTGAGAATGTGAGGGGAACTCGAAGCATAGAAATTCAGATGTCTATGTTTGGTATGAAGGAATAGGATAGCTAGAATTCAGGTGTCAAATAAGTGTTGAGTTTGTTGTTTCAAGTTTGTGGACTAGAATGTGAAATTATATATTCTTCAATGAATTAGGGAAGCACTTCTTCTTCCGAGTCCAGGCCTTGGGAAGGGCACGGGTACCCGGGGTATAGTGGAGCAAAGCTTCGACTCCAGGTTATCAAAAAAAAAAAAATTAGGGAAGCGAAAATTAGCCTTTCTGAATTACTTATCATTTGTTAGTTCATGTAAGTTTATGCATTGATATTGAGCAAATCTACTGGAGGTCCTTTGCATACTTATGTCGTCCAAGAAACAACCCCTTTTCGACGTGCCCTACCTTTGGTCCAATTGATATACTTTAGATTTCCAAATTCCTTCATTTCAAAACAAACAAATAAGTACCATTTTATTTGTTGAATTTCATGGCCTTTGTTATGATCAGATCATCCACGTAGACTAATATGATTGTGACCTCTAACTCTCCCTTTCATAAATAAGTTGGAATCGACCAGAGCCACTGTATAGCTACTCTAGACTAGAAAATTTTCAATCATGAAGGTCTATAGTCTTAAGAGTGTGTGATAGGGAGGGTCCTGCTTGTAATGGGATTTATTTTTTGTTTTGTATTTCTATGGGGTCCAGGTATAGTAGTTAGTCTAGGCTGCTTTGCTGTTAAGGGGAGTGTATAGAGGTAATGGATTCTGGTGGAGGGTATGCTTTTGGCAATTATTTAACTTGTGCGCAAAAGAGCTCTCGAATCTCCCTCTGCTTATACCTTCCTAATACTTGAATAAACTGGTTTCTATCATTGTAACCCTGTTTCTTTTTTGTTCTTATTTGCCGAACAATAAACACGCGTTGAAATTTGAAGCAATTTTGGAGAAATGACATTTGGAAATAAGTCTTGAAATATTTATTTTAGATTTCCTACTCGATGATTTACAAATTTTTTACGTGTGAATGAAGATGAAGGATGAAGTTATTATTTTGCCTTCACACACTTTTACATCTGGCTGGCTGCCTCTTCATTCTTGCAAAGAACGCATCAACTTAGTGAAAGCTAACAGAAGGAAACTCCTCCTTCCCAAAGTATCACTAGTGTTGATCCCCTGAAGAAGAGGTTACTAAATTGCTCTTGTTAAATGCTTGGGGTATTACGATGTTTGAATCAATATGGATGAGGTTTAGTGATAGTTTTTTTATTAGCATGTTTATGGAATCCTCTTTTTGTGAGCATAGTGAAATGGCTATTGAAAAAAATGAATGGGTTGAAATTTAACTTAGAGAGTGGGAAAAGCCGAACAAAGCAACATAATGAGTGTCAACTTGAGCATAGTTAAGTGAATCAACACTTATTACTTCCCCTTAACGTTGAAGATTCAATCTCCAACCTCCCACATTTGTAGTACTCGAAACAACCAAATGGACAAAGGTGTCCATTTTCCTAAGGAGGGTCAAACAAAAGGCGTCCAATCCACATGGATAAGAAAAGTTTTCGAGTAGTCAAAAGAAGAACGCTCGAGTATTCCAATGTAAATAAAGAGGGAAATCTCTTGATTTTCTTTATCCTTTTGCTGCCTCTGCTCTCAACCATAGTGTACGAGATGCGTAGTTTATATATTTCCATGTTTCTGTTATTATTATTTCAGGATGAGAAAGATGCGAAAATTCGAGAATTAACTGCCGAACTACACCGAGAACGAAAGCGATGTGCAGCTTATCAAGAACAGCTTGTCATGATTTTAAGAGACATGGAGGAGCACTCGAATCATCTAGCAAGAAACATAGATGACATTGTTCAAAGTGTGAAAGATATTGAATCAAAAAAGTAAAAACAATTCAATTTCAAATACCTAACCACAGAATCCAAAGAAGAAATATATTTGTTTTTGTAAAAATTGTCTAGCATAACTGATTATAGTTCAGACTTAAATTTGTTCATTAGTCGCGCCCTTTTCCCTCTTATTAGGTGGTGTCTTTTATGGTTAAGGGAAATAAAAGTTTTTAAGAGCTAAATAGGTGTTTTTAAGCACTTTGATAATCTGCTGCGGCAATATTATAATTCAAATTAGATAATTGAG GGAAGGCTGGACGGTGTCAGTGAACACACTGTAATTTTCACTCGACTGTTTGCCATTTTGGTTGGACTCATTCATGGAAGTTTTTCAGGGTTTAGTCCAAACTTCGTAACCCTCACTCTCATGCCGAAAGAACCACCCAAAAATCTCGATTTCAACGACCCCAGAAGCTTCTCGATTCACGATTCACACTACAACCACCGGAAAACACCGAAGAAATGAGATTGGAACCCGAAGAATTTGCGGCGTCGAATGCAATTCGAATAATCAAGGAACCGTGAATCCCAAGATAGGGACGAATCAAATGGATGGAATCCCCACTGTGGTCGAGGATGGGGATGTTGTAGAAAACCCTAGAGGGAAGGATTTGGTCAGAGTAGTTGCTGAAGCTGAGGCGAGAGCGACCGATATTTCAGATACAGAGCCATGTGTAGGTATGGAGTTTGAATCTGAGGAGTCTGCCAAGGTTTTCTACGATGCTTATGCTTCACGCCTTGGTTTTATTATGCGCGTTGATGCATTTCGTCGGTCGATGCGTGATGGTGCGGTTGTTTGGCGTCGACTTGTTTGTAATAAAGAGGGGTTTCGCAAGTTGAGGCCCAAAAGAAGTGAAAATAGGAAGCCTCGAGCTATAACAAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAGAAAACTGGAAAATGGGTTGTAACGAAATTCGTCAAGGATCACAATCATCCACTGATTGTTACTCCTGCCAGTGCTCGTCGAAACGTTCTCCTATCCCTGACACGGGATGAGAAAGATGCGAAAATTCGAGAATTAACTGCCGAACTACACCGAGAACGAAAGCGATGTGCAGCTTATCAAGAACAGCTTGTCATGATTTTAAGAGACATGGAGGAGCACTCGAATCATCTAGCAAGAAACATAGATGACATTGTTCAAAGTGTGAAAGATATTGAATCAAAAAAGTAAAAACAATTCAATTTCAAATACCTAACCACAGAATCCAAAGAAGAAATATATTTGTTTTTGTAAAAATTGTCTAGCATAACTGATTATAGTTCAGACTTAAATTTGTTCATTAGTCGCGCCCTTTTCCCTCTTATTAGGTGGTGTCTTTTATGGTTAAGGGAAATAAAAGTTTTTAAGAGCTAAATAGGTGTTTTTAAGCACTTTGATAATCTGCTGCGGCAATATTATAATTCAAATTAGATAATTGAG ATGGATGGAATCCCCACTGTGGTCGAGGATGGGGATGTTGTAGAAAACCCTAGAGGGAAGGATTTGGTCAGAGTAGTTGCTGAAGCTGAGGCGAGAGCGACCGATATTTCAGATACAGAGCCATGTGTAGGTATGGAGTTTGAATCTGAGGAGTCTGCCAAGGTTTTCTACGATGCTTATGCTTCACGCCTTGGTTTTATTATGCGCGTTGATGCATTTCGTCGGTCGATGCGTGATGGTGCGGTTGTTTGGCGTCGACTTGTTTGTAATAAAGAGGGGTTTCGCAAGTTGAGGCCCAAAAGAAGTGAAAATAGGAAGCCTCGAGCTATAACAAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAGAAAACTGGAAAATGGGTTGTAACGAAATTCGTCAAGGATCACAATCATCCACTGATTGTTACTCCTGCCAGTGCTCGTCGAAACGTTCTCCTATCCCTGACACGGGATGAGAAAGATGCGAAAATTCGAGAATTAACTGCCGAACTACACCGAGAACGAAAGCGATGTGCAGCTTATCAAGAACAGCTTGTCATGATTTTAAGAGACATGGAGGAGCACTCGAATCATCTAGCAAGAAACATAGATGACATTGTTCAAAGTGTGAAAGATATTGAATCAAAAAAGTAA MDGIPTVVEDGDVVENPRGKDLVRVVAEAEARATDISDTEPCVGMEFESEESAKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKLRPKRSENRKPRAITREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSLTRDEKDAKIRELTAELHRERKRCAAYQEQLVMILRDMEEHSNHLARNIDDIVQSVKDIESKK Homology
BLAST of Tan0009717.1 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 2.6e-30 Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 0
HSP 2 Score: 37.0 bits (84), Expect = 3.3e-01 Identity = 36/129 (27.91%), Postives = 58/129 (44.96%), Query Frame = 0
BLAST of Tan0009717.1 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.6e-14 Identity = 45/116 (38.79%), Postives = 61/116 (52.59%), Query Frame = 0
BLAST of Tan0009717.1 vs. ExPASy Swiss-Prot
Match: Q3E7I5 (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.4e-14 Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of Tan0009717.1 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13 Identity = 47/108 (43.52%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of Tan0009717.1 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.5e-13 Identity = 37/99 (37.37%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of Tan0009717.1 vs. NCBI nr
Match: XP_023547555.1 (protein FAR1-RELATED SEQUENCE 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 391.0 bits (1003), Expect = 6.9e-105 Identity = 199/218 (91.28%), Postives = 207/218 (94.95%), Query Frame = 0
BLAST of Tan0009717.1 vs. NCBI nr
Match: XP_022991203.1 (protein FAR1-RELATED SEQUENCE 5 [Cucurbita maxima]) HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104 Identity = 197/218 (90.37%), Postives = 208/218 (95.41%), Query Frame = 0
BLAST of Tan0009717.1 vs. NCBI nr
Match: KAG7014556.1 (Protein FAR1-RELATED SEQUENCE 5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 388.3 bits (996), Expect = 4.5e-104 Identity = 196/218 (89.91%), Postives = 206/218 (94.50%), Query Frame = 0
BLAST of Tan0009717.1 vs. NCBI nr
Match: XP_038897039.1 (protein FAR1-RELATED SEQUENCE 5 isoform X1 [Benincasa hispida] >XP_038897041.1 protein FAR1-RELATED SEQUENCE 5 isoform X1 [Benincasa hispida]) HSP 1 Score: 387.5 bits (994), Expect = 7.7e-104 Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of Tan0009717.1 vs. NCBI nr
Match: XP_022953886.1 (protein FAR1-RELATED SEQUENCE 5 [Cucurbita moschata]) HSP 1 Score: 382.9 bits (982), Expect = 1.9e-102 Identity = 193/218 (88.53%), Postives = 205/218 (94.04%), Query Frame = 0
BLAST of Tan0009717.1 vs. ExPASy TrEMBL
Match: A0A6J1JVH7 (protein FAR1-RELATED SEQUENCE 5 OS=Cucurbita maxima OX=3661 GN=LOC111487929 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 5.7e-105 Identity = 197/218 (90.37%), Postives = 208/218 (95.41%), Query Frame = 0
BLAST of Tan0009717.1 vs. ExPASy TrEMBL
Match: A0A6J1GPB7 (protein FAR1-RELATED SEQUENCE 5 OS=Cucurbita moschata OX=3662 GN=LOC111456290 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 9.1e-103 Identity = 193/218 (88.53%), Postives = 205/218 (94.04%), Query Frame = 0
BLAST of Tan0009717.1 vs. ExPASy TrEMBL
Match: A0A1S3BGE3 (protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489731 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100 Identity = 193/218 (88.53%), Postives = 203/218 (93.12%), Query Frame = 0
BLAST of Tan0009717.1 vs. ExPASy TrEMBL
Match: A0A0A0KA59 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372900 PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 7.5e-97 Identity = 187/218 (85.78%), Postives = 200/218 (91.74%), Query Frame = 0
BLAST of Tan0009717.1 vs. ExPASy TrEMBL
Match: A0A2I4EFQ2 (protein FAR1-RELATED SEQUENCE 7 OS=Juglans regia OX=51240 GN=LOC108989159 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 4.6e-86 Identity = 168/220 (76.36%), Postives = 192/220 (87.27%), Query Frame = 0
BLAST of Tan0009717.1 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 265.0 bits (676), Expect = 5.3e-71 Identity = 135/217 (62.21%), Postives = 170/217 (78.34%), Query Frame = 0
BLAST of Tan0009717.1 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 183.3 bits (464), Expect = 2.0e-46 Identity = 95/184 (51.63%), Postives = 131/184 (71.20%), Query Frame = 0
BLAST of Tan0009717.1 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 162.5 bits (410), Expect = 3.7e-40 Identity = 87/190 (45.79%), Postives = 126/190 (66.32%), Query Frame = 0
BLAST of Tan0009717.1 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 162.5 bits (410), Expect = 3.7e-40 Identity = 87/190 (45.79%), Postives = 126/190 (66.32%), Query Frame = 0
BLAST of Tan0009717.1 vs. TAIR 10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 140.6 bits (353), Expect = 1.5e-33 Identity = 76/182 (41.76%), Postives = 116/182 (63.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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