Tan0009125.1 (mRNA) Snake gourd v1

Overview
NameTan0009125.1
TypemRNA
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEpidermal patterning factor-like protein
LocationLG03: 73964363 .. 73964932 (+)
Sequence length485
RNA-Seq ExpressionTan0009125.1
SyntenyTan0009125.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTCCCTTGCACTTGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTTAGTTACTTATTTGTGGGTAACAGAAAAATCTGGCAACTGGGTCTTTATTGCGTATGATTTTTACTCCTTTGCTGCGTTGGATCCATGAGTTTTGGGCATCAATGACTTGATGACTACCATGAATTTGCCTGCTGTTTGGGCCACTTCATTACTTATTGTGCTTCTTCATCTTCTCCTTCTTCTCTCCGCCTCTTCCCCTCCCAGAGTATGCCTTTCTTTCTCTCTTTCATGCCCTTTCTTTCTGATATTGCTAGTGACTCTGTTTCTCAGTTTGGTTTGCTTGCTATCAGGGTATGTTTTTCGAAGAGAAAACCAGGCTCGGATCCACCCCACCGAGCTGCCACAACAAATGCAACGAGTGCCATCCATGCATGGCGGTCCAAGTGCCTAGTATGCCCAGCCGCGCCAGCCGCTCGGCTTTGCCAATGGGGTTTTTTGTGTCATCTCCACAAGAAAACAGATACTCATTTTACAAGCCCTTGGGTTGGAAGTGCCGCTGTGGGAACCATTTCTTCAATCCTTAA

mRNA sequence

GTTTCCCTTGCACTTGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTTAGTTACTTATTTGTGGGTAACAGAAAAATCTGGCAACTGGGTCTTTATTGCGTATGATTTTTACTCCTTTGCTGCGTTGGATCCATGAGTTTTGGGCATCAATGACTTGATGACTACCATGAATTTGCCTGCTGTTTGGGCCACTTCATTACTTATTGTGCTTCTTCATCTTCTCCTTCTTCTCTCCGCCTCTTCCCCTCCCAGAGGTATGTTTTTCGAAGAGAAAACCAGGCTCGGATCCACCCCACCGAGCTGCCACAACAAATGCAACGAGTGCCATCCATGCATGGCGGTCCAAGTGCCTAGTATGCCCAGCCGCGCCAGCCGCTCGGCTTTGCCAATGGGGTTTTTTGTGTCATCTCCACAAGAAAACAGATACTCATTTTACAAGCCCTTGGGTTGGAAGTGCCGCTGTGGGAACCATTTCTTCAATCCTTAA

Coding sequence (CDS)

ATGACTACCATGAATTTGCCTGCTGTTTGGGCCACTTCATTACTTATTGTGCTTCTTCATCTTCTCCTTCTTCTCTCCGCCTCTTCCCCTCCCAGAGGTATGTTTTTCGAAGAGAAAACCAGGCTCGGATCCACCCCACCGAGCTGCCACAACAAATGCAACGAGTGCCATCCATGCATGGCGGTCCAAGTGCCTAGTATGCCCAGCCGCGCCAGCCGCTCGGCTTTGCCAATGGGGTTTTTTGTGTCATCTCCACAAGAAAACAGATACTCATTTTACAAGCCCTTGGGTTGGAAGTGCCGCTGTGGGAACCATTTCTTCAATCCTTAA

Protein sequence

MTTMNLPAVWATSLLIVLLHLLLLLSASSPPRGMFFEEKTRLGSTPPSCHNKCNECHPCMAVQVPSMPSRASRSALPMGFFVSSPQENRYSFYKPLGWKCRCGNHFFNP
Homology
BLAST of Tan0009125.1 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-21
Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 0

Query: 8   AVWATSLLIVLLHLLLLLSAS-----------SPPRGMFFEEKTRLGSTPPSCHNKCNEC 67
           A++ ++LL++ L L+LL++               P+    E+K RLGSTPPSCHN+CN C
Sbjct: 3   AIYKSTLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNC 62

Query: 68  HPCMAVQVPSMP--SRASRSALPMGFFVSSPQE-----NRYSFYKPLGWKCRCGNHFFNP 110
           HPCMA+QVP++P  SR +R     G FV  P       ++YS YKP+GWKC C  HF+NP
Sbjct: 63  HPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

BLAST of Tan0009125.1 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.9e-06
Identity = 38/127 (29.92%), Postives = 57/127 (44.88%), Query Frame = 0

Query: 9   VWA---TSLLIVLL-----HLLLLLSASSPPRGMFFEE----------KTRLGSTPPSCH 68
           VW+   +S L++LL     H  L+ +    P  + F +          +  +GS PP C 
Sbjct: 2   VWSSNMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCE 61

Query: 69  N-KCNECHPCMAVQVPSMPSRASRSALPMGFFVSS-------PQENRYSFYKPLGWKCRC 110
             +C  C  C A+QVP+ P     S L      SS        + +  + YKP+ WKC+C
Sbjct: 62  RVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKC 121

BLAST of Tan0009125.1 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.8e-06
Identity = 26/66 (39.39%), Postives = 37/66 (56.06%), Query Frame = 0

Query: 37  EEKTRLGSTPPSCHNKCNECHPCMAVQVPSMPSRASRSALPMGFFVSSPQENRYSFYKPL 96
           + + R+GS PPSC  KC  C PC A+Q P++      S++P      SP    Y+ Y+P 
Sbjct: 52  KRRRRIGSKPPSCEKKCYGCEPCEAIQFPTI------SSIPH----LSP---HYANYQPE 104

Query: 97  GWKCRC 103
           GW+C C
Sbjct: 112 GWRCHC 104

BLAST of Tan0009125.1 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.5e-05
Identity = 25/68 (36.76%), Postives = 33/68 (48.53%), Query Frame = 0

Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPSRASRSALPMGFFVSSPQENRYSFYKPLGWKCR 101
           LGS+PP C +KC  C PC  V VP          +P G  V++        Y P  W+C+
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVTAE-------YYPEAWRCK 156

Query: 102 CGNHFFNP 110
           CGN  + P
Sbjct: 166 CGNKLYMP 156

BLAST of Tan0009125.1 vs. NCBI nr
Match: KGN48738.1 (hypothetical protein Csa_003101 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 2.7e-49
Identity = 101/113 (89.38%), Postives = 102/113 (90.27%), Query Frame = 0

Query: 1   MTTMNLPAVWATSLLIVLLHLLLLLSASSPPRGMFFEEKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL  VWATSLLIVLLHLLLLLSASSPPRGMFFE+KTRLGSTPPSCHNKCNECHPCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPSRASR----SALPMGFFVSSPQENRYSFYKPLGWKCRCGNHFFNP 110
           AVQVPSMP RASR    SALPM FF SS Q NRYSFYKPLGWKCRCGNHFFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

BLAST of Tan0009125.1 vs. NCBI nr
Match: XP_008440584.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 7.8e-49
Identity = 100/113 (88.50%), Postives = 102/113 (90.27%), Query Frame = 0

Query: 1   MTTMNLPAVWATSLLIVLLHLLLLLSASSPPRGMFFEEKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL  VWATSLLIVLLHLLLLLSASSPPRG+FFE+KTRLGSTPPSCHNKCNECHPCM
Sbjct: 22  MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPSRASR----SALPMGFFVSSPQENRYSFYKPLGWKCRCGNHFFNP 110
           AVQVPSMP RASR    SALPM FF SS Q NRYSFYKPLGWKCRCGNHFFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

BLAST of Tan0009125.1 vs. NCBI nr
Match: KAG6604039.1 (EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034205.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.8 bits (473), Expect = 9.9e-44
Identity = 92/113 (81.42%), Postives = 96/113 (84.96%), Query Frame = 0

Query: 1   MTTMNLPAVWATSLLIVLLHLLLLLSASSPPRGMFFEEKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL  VWATSLL+VL+HLL LLSAS PP G+ FE+KTRLGSTPPSCHNKCNECHPCM
Sbjct: 1   MTTMNLATVWATSLLLVLVHLLPLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECHPCM 60

Query: 61  AVQVPSMPSRASR----SALPMGFFVSSPQENRYSFYKPLGWKCRCGNHFFNP 110
           AVQVPSMP RA R    SALPM FF SSPQ NRYSFYKPL WKCRCGN FFNP
Sbjct: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 113

BLAST of Tan0009125.1 vs. NCBI nr
Match: KAA0036313.1 (EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa] >TYK12707.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 153.7 bits (387), Expect = 9.3e-34
Identity = 70/81 (86.42%), Postives = 72/81 (88.89%), Query Frame = 0

Query: 33  GMFFEEKTRLGSTPPSCHNKCNECHPCMAVQVPSMPSRASR----SALPMGFFVSSPQEN 92
           G+FFE+KTRLGSTPPSCHNKCNECHPCMAVQVPSMP RASR    SALPM FF SS Q N
Sbjct: 29  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGN 88

Query: 93  RYSFYKPLGWKCRCGNHFFNP 110
           RYSFYKPLGWKCRCGNHFFNP
Sbjct: 89  RYSFYKPLGWKCRCGNHFFNP 109

BLAST of Tan0009125.1 vs. NCBI nr
Match: XP_014508135.1 (EPIDERMAL PATTERNING FACTOR-like protein 1 [Vigna radiata var. radiata])

HSP 1 Score: 132.1 bits (331), Expect = 2.9e-27
Identity = 71/113 (62.83%), Postives = 80/113 (70.80%), Query Frame = 0

Query: 12  TSLLIVLL--HLLLLLSASS------PPRGMFFEEKTRLGSTPPSCHNKCNECHPCMAVQ 71
           TSLLIVLL  + L L+SAS+       PR + FEEK RLGS PPSCHNKCN+CHPCMAVQ
Sbjct: 13  TSLLIVLLLHNFLSLVSASNHPHTAISPRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 72  VPSMPSRASR-------SALPMGFFVSSPQENRYSFYKPLGWKCRCGNHFFNP 110
           VP++PS  S        SA+   F  SSPQ NRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMATFFNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

BLAST of Tan0009125.1 vs. ExPASy TrEMBL
Match: A0A0A0KGR1 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G499820 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-49
Identity = 101/113 (89.38%), Postives = 102/113 (90.27%), Query Frame = 0

Query: 1   MTTMNLPAVWATSLLIVLLHLLLLLSASSPPRGMFFEEKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL  VWATSLLIVLLHLLLLLSASSPPRGMFFE+KTRLGSTPPSCHNKCNECHPCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPSRASR----SALPMGFFVSSPQENRYSFYKPLGWKCRCGNHFFNP 110
           AVQVPSMP RASR    SALPM FF SS Q NRYSFYKPLGWKCRCGNHFFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

BLAST of Tan0009125.1 vs. ExPASy TrEMBL
Match: A0A1S3B112 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484960 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.8e-49
Identity = 100/113 (88.50%), Postives = 102/113 (90.27%), Query Frame = 0

Query: 1   MTTMNLPAVWATSLLIVLLHLLLLLSASSPPRGMFFEEKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL  VWATSLLIVLLHLLLLLSASSPPRG+FFE+KTRLGSTPPSCHNKCNECHPCM
Sbjct: 22  MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPSRASR----SALPMGFFVSSPQENRYSFYKPLGWKCRCGNHFFNP 110
           AVQVPSMP RASR    SALPM FF SS Q NRYSFYKPLGWKCRCGNHFFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

BLAST of Tan0009125.1 vs. ExPASy TrEMBL
Match: A0A5A7T0A6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002950 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.5e-34
Identity = 70/81 (86.42%), Postives = 72/81 (88.89%), Query Frame = 0

Query: 33  GMFFEEKTRLGSTPPSCHNKCNECHPCMAVQVPSMPSRASR----SALPMGFFVSSPQEN 92
           G+FFE+KTRLGSTPPSCHNKCNECHPCMAVQVPSMP RASR    SALPM FF SS Q N
Sbjct: 29  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGN 88

Query: 93  RYSFYKPLGWKCRCGNHFFNP 110
           RYSFYKPLGWKCRCGNHFFNP
Sbjct: 89  RYSFYKPLGWKCRCGNHFFNP 109

BLAST of Tan0009125.1 vs. ExPASy TrEMBL
Match: A0A1S3UQ46 (Epidermal patterning factor-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106767707 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27
Identity = 71/113 (62.83%), Postives = 80/113 (70.80%), Query Frame = 0

Query: 12  TSLLIVLL--HLLLLLSASS------PPRGMFFEEKTRLGSTPPSCHNKCNECHPCMAVQ 71
           TSLLIVLL  + L L+SAS+       PR + FEEK RLGS PPSCHNKCN+CHPCMAVQ
Sbjct: 13  TSLLIVLLLHNFLSLVSASNHPHTAISPRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 72  VPSMPSRASR-------SALPMGFFVSSPQENRYSFYKPLGWKCRCGNHFFNP 110
           VP++PS  S        SA+   F  SSPQ NRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMATFFNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

BLAST of Tan0009125.1 vs. ExPASy TrEMBL
Match: F6HJL0 (Epidermal patterning factor-like protein OS=Vitis vinifera OX=29760 GN=VIT_00s0391g00030 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27
Identity = 67/123 (54.47%), Postives = 84/123 (68.29%), Query Frame = 0

Query: 1   MTTMNLPAVWATSLLIVLLHLLLLLSA-------SSPPRGMFFEEKTRLGSTPPSCHNKC 60
           M ++    ++  +++  +LHLLL  ++       S   RG+ FEEKTRLGSTPPSCHNKC
Sbjct: 1   MNSLGSYLLYTITVVTAVLHLLLSPASCFSQQQGSDSTRGLLFEEKTRLGSTPPSCHNKC 60

Query: 61  NECHPCMAVQVPSMPSRAS-----RSALPMGFFVSSPQ--ENRYSFYKPLGWKCRCGNHF 110
           NECHPCMAVQVP++PS +       + +PM FF SSP    NRYS YKPLGWKC CG+HF
Sbjct: 61  NECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPSTAANRYSNYKPLGWKCHCGDHF 120

BLAST of Tan0009125.1 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-22
Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 0

Query: 8   AVWATSLLIVLLHLLLLLSAS-----------SPPRGMFFEEKTRLGSTPPSCHNKCNEC 67
           A++ ++LL++ L L+LL++               P+    E+K RLGSTPPSCHN+CN C
Sbjct: 3   AIYKSTLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNC 62

Query: 68  HPCMAVQVPSMP--SRASRSALPMGFFVSSPQE-----NRYSFYKPLGWKCRCGNHFFNP 110
           HPCMA+QVP++P  SR +R     G FV  P       ++YS YKP+GWKC C  HF+NP
Sbjct: 63  HPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

BLAST of Tan0009125.1 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 2.1e-07
Identity = 38/127 (29.92%), Postives = 57/127 (44.88%), Query Frame = 0

Query: 9   VWA---TSLLIVLL-----HLLLLLSASSPPRGMFFEE----------KTRLGSTPPSCH 68
           VW+   +S L++LL     H  L+ +    P  + F +          +  +GS PP C 
Sbjct: 2   VWSSNMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCE 61

Query: 69  N-KCNECHPCMAVQVPSMPSRASRSALPMGFFVSS-------PQENRYSFYKPLGWKCRC 110
             +C  C  C A+QVP+ P     S L      SS        + +  + YKP+ WKC+C
Sbjct: 62  RVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKC 121

BLAST of Tan0009125.1 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07
Identity = 26/66 (39.39%), Postives = 37/66 (56.06%), Query Frame = 0

Query: 37  EEKTRLGSTPPSCHNKCNECHPCMAVQVPSMPSRASRSALPMGFFVSSPQENRYSFYKPL 96
           + + R+GS PPSC  KC  C PC A+Q P++      S++P      SP    Y+ Y+P 
Sbjct: 52  KRRRRIGSKPPSCEKKCYGCEPCEAIQFPTI------SSIPH----LSP---HYANYQPE 104

Query: 97  GWKCRC 103
           GW+C C
Sbjct: 112 GWRCHC 104

BLAST of Tan0009125.1 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06
Identity = 25/68 (36.76%), Postives = 33/68 (48.53%), Query Frame = 0

Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPSRASRSALPMGFFVSSPQENRYSFYKPLGWKCR 101
           LGS+PP C +KC  C PC  V VP          +P G  V++        Y P  W+C+
Sbjct: 180 LGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVTAE-------YYPEAWRCK 230

Query: 102 CGNHFFNP 110
           CGN  + P
Sbjct: 240 CGNKLYMP 230

BLAST of Tan0009125.1 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06
Identity = 25/68 (36.76%), Postives = 33/68 (48.53%), Query Frame = 0

Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPSRASRSALPMGFFVSSPQENRYSFYKPLGWKCR 101
           LGS+PP C +KC  C PC  V VP          +P G  V++        Y P  W+C+
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVTAE-------YYPEAWRCK 156

Query: 102 CGNHFFNP 110
           CGN  + P
Sbjct: 166 CGNKLYMP 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LFT51.4e-2145.00EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9T0682.9e-0629.92EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
C4B8C43.8e-0639.39EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q1PEY62.5e-0536.76EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Match NameE-valueIdentityDescription
KGN48738.12.7e-4989.38hypothetical protein Csa_003101 [Cucumis sativus][more]
XP_008440584.17.8e-4988.50PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo][more]
KAG6604039.19.9e-4481.42EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subs... [more]
KAA0036313.19.3e-3486.42EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa] >TYK12707.... [more]
XP_014508135.12.9e-2762.83EPIDERMAL PATTERNING FACTOR-like protein 1 [Vigna radiata var. radiata][more]
Match NameE-valueIdentityDescription
A0A0A0KGR11.3e-4989.38Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G499... [more]
A0A1S3B1123.8e-4988.50Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484960... [more]
A0A5A7T0A64.5e-3486.42Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3UQ461.4e-2762.83Epidermal patterning factor-like protein OS=Vigna radiata var. radiata OX=3916 G... [more]
F6HJL01.8e-2754.47Epidermal patterning factor-like protein OS=Vitis vinifera OX=29760 GN=VIT_00s03... [more]
Match NameE-valueIdentityDescription
AT5G10310.11.0e-2245.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G37810.12.1e-0729.92unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G13898.12.7e-0739.39unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT2G30370.11.8e-0636.76allergen-related [more]
AT2G30370.21.8e-0636.76allergen-related [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 41..109
e-value: 1.6E-21
score: 76.0
NoneNo IPR availablePANTHERPTHR33109:SF3EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1coord: 13..109
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 13..109

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Tan0009125Tan0009125gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0009125.1-five_prime_utrTan0009125.1-five_prime_utr-LG03:73964363..73964517five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0009125.1-exonTan0009125.1-exon-LG03:73964363..73964613exon
Tan0009125.1-exonTan0009125.1-exon-LG03:73964699..73964932exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0009125.1-cdsTan0009125.1-cds-LG03:73964518..73964613CDS
Tan0009125.1-cdsTan0009125.1-cds-LG03:73964699..73964932CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Tan0009125.1Tan0009125.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010374 stomatal complex development
biological_process GO:0010052 guard cell differentiation
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane