Tan0006603.1 (mRNA) Snake gourd v1

Overview


Name	Tan0006603.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG10: 19368275 .. 19368721 (+)
Sequence length	447
RNA-Seq Expression	Tan0006603.1
Synteny	Tan0006603.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACTATTTGGATAAGAGCCATATCCAAGTCCACAAATATCATTATAAACCCTTCAATCAATATCACATTATGCAAATCCACAAAACAAACCAACAACAACTTGAATAAAATCACCTCTCTAAACCTTGTAACTAGGGTTTGTCTTTGCACACCAATCTCTTCTTTCAATGAGATTTTCCAAGCTGAAATCCCACCTAGAAAAAGCCATACTCATACTCATCCAAGGCCAAAGCCACCCCTCTCCACGACTCCGAGGCTCAACGTCGATCGCCCCAAAAGGGTTTTTCGAGGAAAATTGTTAACCGACGATGTCTCGATGAGAAAATTCGTCGTCGAAGAAGAGACAATGATGCATGTGAGGAAAAGAAACCAAATGGAGGTCATAAAGAGAAGGAGAAGTGTAATGAGAAGAGAGAAGCTTGGGCCAAGTCCTCTTAGTTAA

mRNA sequence

ATGGGCACTATTTGGATAAGAGCCATATCCAAGTCCACAAATATCATTATAAACCCTTCAATCAATATCACATTATGCAAATCCACAAAACAAACCAACAACAACTTGAATAAAATCACCTCTCTAAACCTTGTAACTAGGGTTTGTCTTTGCACACCAATCTCTTCTTTCAATGAGATTTTCCAAGCTGAAATCCCACCTAGAAAAAGCCATACTCATACTCATCCAAGGCCAAAGCCACCCCTCTCCACGACTCCGAGGCTCAACGTCGATCGCCCCAAAAGGGTTTTTCGAGGAAAATTGTTAACCGACGATGTCTCGATGAGAAAATTCGTCGTCGAAGAAGAGACAATGATGCATGTGAGGAAAAGAAACCAAATGGAGGTCATAAAGAGAAGGAGAAGTGTAATGAGAAGAGAGAAGCTTGGGCCAAGTCCTCTTAGTTAA

Coding sequence (CDS)

ATGGGCACTATTTGGATAAGAGCCATATCCAAGTCCACAAATATCATTATAAACCCTTCAATCAATATCACATTATGCAAATCCACAAAACAAACCAACAACAACTTGAATAAAATCACCTCTCTAAACCTTGTAACTAGGGTTTGTCTTTGCACACCAATCTCTTCTTTCAATGAGATTTTCCAAGCTGAAATCCCACCTAGAAAAAGCCATACTCATACTCATCCAAGGCCAAAGCCACCCCTCTCCACGACTCCGAGGCTCAACGTCGATCGCCCCAAAAGGGTTTTTCGAGGAAAATTGTTAACCGACGATGTCTCGATGAGAAAATTCGTCGTCGAAGAAGAGACAATGATGCATGTGAGGAAAAGAAACCAAATGGAGGTCATAAAGAGAAGGAGAAGTGTAATGAGAAGAGAGAAGCTTGGGCCAAGTCCTCTTAGTTAA

Protein sequence

MGTIWIRAISKSTNIIINPSINITLCKSTKQTNNNLNKITSLNLVTRVCLCTPISSFNEIFQAEIPPRKSHTHTHPRPKPPLSTTPRLNVDRPKRVFRGKLLTDDVSMRKFVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS

Homology

[Close]

BLAST of Tan0006603.1 vs. NCBI nr
Match: XP_023515076.1 (uncharacterized protein LOC111779211 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 86/156 (55.13%), Postives = 108/156 (69.23%), Query Frame = 0


Query: 1   MGTIWIRAISKSTNIIINPSINITLCKSTKQTNNNLNKITSLNLV---TRVCLCTPISSF 60
           +GT W    SKS +    PS N  L  +    +N + K TSL +    TRVCLC PISS+
Sbjct: 21  VGTQWRTTSSKSRDQYPIPSPNGALNSNNNNKHNKMRKCTSLKIATSFTRVCLCAPISSY 80

Query: 61  NEIF-QAEIPPRKSHTHTHPRPKPPLST----TPRLNVDRPKRVFRGKLLTDDVSMRKFV 120
           NEIF QA+IPPR+SH++   +P P  S     TPRL+ +  +RVFRGK LTDDV MR+FV
Sbjct: 81  NEIFQQADIPPRRSHSYPRSKPFPTTSNIVLPTPRLSGENSRRVFRGKSLTDDVLMRRFV 140

Query: 121 VEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           VEEE MM VR+RNQM+VI R+R++MRR+KLGPSPLS
Sbjct: 141 VEEEAMMQVRRRNQMDVI-RKRNLMRRKKLGPSPLS 175

[Close]

BLAST of Tan0006603.1 vs. NCBI nr
Match: XP_023004121.1 (uncharacterized protein LOC111497548 [Cucurbita maxima])

HSP 1 Score: 138.7 bits (348), Expect = 4.2e-29
Identity = 85/158 (53.80%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 1   MGTIWIRAISKSTNIIINPSINITLCKSTKQTNNNLNKITSLNLV---TRVCLCTPISSF 60
           +GT W    SKS +    PS N     ++   +N + K TSL +    TRVCLC PISS+
Sbjct: 21  VGTQWRTTSSKSRDQYPIPSPNGAFNSNSNNKHNKMRKCTSLKIATSFTRVCLCAPISSY 80

Query: 61  NEIF-QAEIPPRKSHTHTHPRPKPPLST------TPRLNVDRPKRVFRGKLLTDDVSMRK 120
           NEIF QA+IPPR+SH++   +P P  +T      TP+L+ +  +RVFRGK LTDDV MR+
Sbjct: 81  NEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPQLSGENSRRVFRGKSLTDDVLMRR 140

Query: 121 FVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           FVVEEE MM VR+RNQMEVI R+R++MRR+KLGPSPLS
Sbjct: 141 FVVEEEAMMQVRRRNQMEVI-RKRNLMRRKKLGPSPLS 177

[Close]

BLAST of Tan0006603.1 vs. NCBI nr
Match: GAV66533.1 (hypothetical protein CFOL_v3_10043 [Cephalotus follicularis])

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-28
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 0


Query: 2   GTIWIRAISKSTNIIINPSINITL------CKS-----TKQTNNNLNKITSL---NLVTR 61
           GT+   +ISKST     P+ N TL      CK+      K +   L K TSL   N  TR
Sbjct: 39  GTLCKSSISKSTK--TTPTTNATLWRSGLSCKNPEIPVPKYSKGKLRKCTSLRVANSFTR 98

Query: 62  VCLCTPISSFNEIFQAEIPPRKSHTHTHPRPKPP-----LSTTPRLNVDRPKRVFRGKLL 121
           VCLC PISS+NE+F+A++PPR+S+T+   +  PP     +++T RL+V+  +RVFRGK L
Sbjct: 99  VCLCAPISSYNEVFRADVPPRRSNTYPRSKSFPPETPERITSTTRLSVE-GRRVFRGKSL 158

Query: 122 TDDVSMRKFVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           TDDV MR+FVVEEE MM VR+RNQMEVI RRRS+MRR KLGPSPLS
Sbjct: 159 TDDVLMRRFVVEEEAMMQVRRRNQMEVI-RRRSLMRRNKLGPSPLS 200

[Close]

BLAST of Tan0006603.1 vs. NCBI nr
Match: XP_022960213.1 (uncharacterized protein LOC111461019 [Cucurbita moschata])

HSP 1 Score: 135.6 bits (340), Expect = 3.5e-28
Identity = 86/158 (54.43%), Postives = 106/158 (67.09%), Query Frame = 0


Query: 1   MGTIWIRAISKSTNIIINPSINITLCKSTKQTNNNLNKITSLNLV---TRVCLCTPISSF 60
           +GT W    SK  +    PS N          NN + K TSL +    TRVCLC PISS+
Sbjct: 21  VGTQWRTTSSKPRDQYPIPSPNGAF---NSNNNNKMRKCTSLKIATSFTRVCLCAPISSY 80

Query: 61  NEIF-QAEIPPRKSHTHTHPRPKPPLST------TPRLNVDRPKRVFRGKLLTDDVSMRK 120
           NEIF QA+IPPR+SH++   +P P  +T      TPRL+ +  +RVFRGK LTDDV MR+
Sbjct: 81  NEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENSRRVFRGKSLTDDVLMRR 140

Query: 121 FVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           FVVEEE MM VR+RNQMEVI R+R++MRR+KLGPSPLS
Sbjct: 141 FVVEEEAMMQVRRRNQMEVI-RKRNLMRRKKLGPSPLS 174

[Close]

BLAST of Tan0006603.1 vs. NCBI nr
Match: XP_019420544.1 (PREDICTED: uncharacterized protein LOC109330718 [Lupinus angustifolius])

HSP 1 Score: 135.2 bits (339), Expect = 4.6e-28
Identity = 92/166 (55.42%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 1   MGTIWIRAISKSTNIII-NPSINITLCKS----TKQTN-NNLNKITSLNLV---TRVCLC 60
           M T+W +++SK TNI   N +I  T+ KS    T+ +N N L K TSL +    TRVCLC
Sbjct: 40  MATLW-KSMSKLTNIATSNSTIWKTMPKSPQVPTQNSNKNKLRKSTSLKVATSFTRVCLC 99

Query: 61  TPISSFNEIFQAEIPPRKSHTHTHPRPKPPL-STTPRLNVDRP--------KRVFRGKLL 120
            PI S+N++F+AE+PPR+S  +T+PR KPPL +TT    V  P        ++VFRGK L
Sbjct: 100 APIYSYNDVFKAEVPPRRS--NTYPRSKPPLQATTTHERVHVPSARISTEGRKVFRGKSL 159

Query: 121 TDDVSMRKFVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           TDDV MR+FV+EEE MM VR+RNQMEVI RRRS+MRR+KLGPSPLS
Sbjct: 160 TDDVLMRRFVIEEEAMMQVRRRNQMEVI-RRRSIMRRKKLGPSPLS 201

[Close]

BLAST of Tan0006603.1 vs. ExPASy TrEMBL
Match: A0A6J1KR77 (uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29
Identity = 85/158 (53.80%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 1   MGTIWIRAISKSTNIIINPSINITLCKSTKQTNNNLNKITSLNLV---TRVCLCTPISSF 60
           +GT W    SKS +    PS N     ++   +N + K TSL +    TRVCLC PISS+
Sbjct: 21  VGTQWRTTSSKSRDQYPIPSPNGAFNSNSNNKHNKMRKCTSLKIATSFTRVCLCAPISSY 80

Query: 61  NEIF-QAEIPPRKSHTHTHPRPKPPLST------TPRLNVDRPKRVFRGKLLTDDVSMRK 120
           NEIF QA+IPPR+SH++   +P P  +T      TP+L+ +  +RVFRGK LTDDV MR+
Sbjct: 81  NEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPQLSGENSRRVFRGKSLTDDVLMRR 140

Query: 121 FVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           FVVEEE MM VR+RNQMEVI R+R++MRR+KLGPSPLS
Sbjct: 141 FVVEEEAMMQVRRRNQMEVI-RKRNLMRRKKLGPSPLS 177

[Close]

BLAST of Tan0006603.1 vs. ExPASy TrEMBL
Match: A0A1Q3BFH0 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10043 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 0


Query: 2   GTIWIRAISKSTNIIINPSINITL------CKS-----TKQTNNNLNKITSL---NLVTR 61
           GT+   +ISKST     P+ N TL      CK+      K +   L K TSL   N  TR
Sbjct: 39  GTLCKSSISKSTK--TTPTTNATLWRSGLSCKNPEIPVPKYSKGKLRKCTSLRVANSFTR 98

Query: 62  VCLCTPISSFNEIFQAEIPPRKSHTHTHPRPKPP-----LSTTPRLNVDRPKRVFRGKLL 121
           VCLC PISS+NE+F+A++PPR+S+T+   +  PP     +++T RL+V+  +RVFRGK L
Sbjct: 99  VCLCAPISSYNEVFRADVPPRRSNTYPRSKSFPPETPERITSTTRLSVE-GRRVFRGKSL 158

Query: 122 TDDVSMRKFVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           TDDV MR+FVVEEE MM VR+RNQMEVI RRRS+MRR KLGPSPLS
Sbjct: 159 TDDVLMRRFVVEEEAMMQVRRRNQMEVI-RRRSLMRRNKLGPSPLS 200

[Close]

BLAST of Tan0006603.1 vs. ExPASy TrEMBL
Match: A0A6J1H871 (uncharacterized protein LOC111461019 OS=Cucurbita moschata OX=3662 GN=LOC111461019 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28
Identity = 86/158 (54.43%), Postives = 106/158 (67.09%), Query Frame = 0


Query: 1   MGTIWIRAISKSTNIIINPSINITLCKSTKQTNNNLNKITSLNLV---TRVCLCTPISSF 60
           +GT W    SK  +    PS N          NN + K TSL +    TRVCLC PISS+
Sbjct: 21  VGTQWRTTSSKPRDQYPIPSPNGAF---NSNNNNKMRKCTSLKIATSFTRVCLCAPISSY 80

Query: 61  NEIF-QAEIPPRKSHTHTHPRPKPPLST------TPRLNVDRPKRVFRGKLLTDDVSMRK 120
           NEIF QA+IPPR+SH++   +P P  +T      TPRL+ +  +RVFRGK LTDDV MR+
Sbjct: 81  NEIFQQADIPPRRSHSYPRSKPFPTTTTNNIVLPTPRLSGENSRRVFRGKSLTDDVLMRR 140

Query: 121 FVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           FVVEEE MM VR+RNQMEVI R+R++MRR+KLGPSPLS
Sbjct: 141 FVVEEEAMMQVRRRNQMEVI-RKRNLMRRKKLGPSPLS 174

[Close]

BLAST of Tan0006603.1 vs. ExPASy TrEMBL
Match: A0A1J7GJ16 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_18294 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.2e-28
Identity = 92/166 (55.42%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 1   MGTIWIRAISKSTNIII-NPSINITLCKS----TKQTN-NNLNKITSLNLV---TRVCLC 60
           M T+W +++SK TNI   N +I  T+ KS    T+ +N N L K TSL +    TRVCLC
Sbjct: 3   MATLW-KSMSKLTNIATSNSTIWKTMPKSPQVPTQNSNKNKLRKSTSLKVATSFTRVCLC 62

Query: 61  TPISSFNEIFQAEIPPRKSHTHTHPRPKPPL-STTPRLNVDRP--------KRVFRGKLL 120
            PI S+N++F+AE+PPR+S  +T+PR KPPL +TT    V  P        ++VFRGK L
Sbjct: 63  APIYSYNDVFKAEVPPRRS--NTYPRSKPPLQATTTHERVHVPSARISTEGRKVFRGKSL 122

Query: 121 TDDVSMRKFVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           TDDV MR+FV+EEE MM VR+RNQMEVI RRRS+MRR+KLGPSPLS
Sbjct: 123 TDDVLMRRFVIEEEAMMQVRRRNQMEVI-RRRSIMRRKKLGPSPLS 164

[Close]

BLAST of Tan0006603.1 vs. ExPASy TrEMBL
Match: A0A6A1VRZ8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G000481 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.8e-28
Identity = 87/163 (53.37%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 1   MGTIWIRAISKSTNIIINPSINITLCKSTKQT---------NNNLNKITSLNLV---TRV 60
           M ++W R++SKST I   P  N T+ K+  +T          N L K TSL +    TRV
Sbjct: 1   MASVW-RSVSKSTEI---PKTNGTIWKTISKTTEIPTANPNRNKLRKCTSLKVATSFTRV 60

Query: 61  CLCTPISSFNEIFQAEIPPRKSHTHTHPRPKPPLS---TTPRLNVDRPKRVFRGKLLTDD 120
           CLC PISS+NE+F+AE+PPR+S+++   +P P       + RL+V+  +RVFRGK LTDD
Sbjct: 61  CLCAPISSYNEVFRAEVPPRRSNSYPRSKPFPTSQEKIPSARLSVE-GRRVFRGKSLTDD 120

Query: 121 VSMRKFVVEEETMMHVRKRNQMEVIKRRRSVMRREKLGPSPLS 149
           V MR+FVVEEE MM VR+RNQMEVI RRRS+MRR+KLGPS LS
Sbjct: 121 VLMRRFVVEEEAMMQVRRRNQMEVI-RRRSIMRRKKLGPSRLS 157

[Close]

BLAST of Tan0006603.1 vs. TAIR 10
Match: AT3G59680.1 (unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 101.7 bits (252), Expect = 5.3e-22
Identity = 60/140 (42.86%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 18  NPSINITLCKSTKQTNNNLNKITSL----NLVTRVCLCTPISSFNEIFQAEIPPRKSHTH 77
           NPS+N +   +  Q  + L K +SL    N  TRVCLC PI  ++++F+  +PPR+S ++
Sbjct: 50  NPSVN-SKSSNHNQIYHQLRKCSSLKVAANSFTRVCLCAPIGPYDDVFRIHVPPRRSSSY 109

Query: 78  THPRPKPPLS----TTPRLNVDRPKRVFRGKLLTDDVSMRKFVV-EEETMMHVRKRNQME 137
              +P P  +     T R++VD  +R+FRGK L ++  MR+FVV EEE +M  RKR+QME
Sbjct: 110 PPSKPLPMETAVAVATARMSVDSGRRIFRGKSLRENALMRRFVVAEEEAIMENRKRDQME 169

Query: 138 VIKRRRSVMRREKLGPSPLS 149
           ++++R  + R++KLGPSPLS
Sbjct: 170 IVRKRNQMRRKKKLGPSPLS 188

[Close]

BLAST of Tan0006603.1 vs. TAIR 10
Match: AT3G59680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 101.7 bits (252), Expect = 5.3e-22
Identity = 60/140 (42.86%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 18  NPSINITLCKSTKQTNNNLNKITSL----NLVTRVCLCTPISSFNEIFQAEIPPRKSHTH 77
           NPS+N +   +  Q  + L K +SL    N  TRVCLC PI  ++++F+  +PPR+S ++
Sbjct: 78  NPSVN-SKSSNHNQIYHQLRKCSSLKVAANSFTRVCLCAPIGPYDDVFRIHVPPRRSSSY 137

Query: 78  THPRPKPPLS----TTPRLNVDRPKRVFRGKLLTDDVSMRKFVV-EEETMMHVRKRNQME 137
              +P P  +     T R++VD  +R+FRGK L ++  MR+FVV EEE +M  RKR+QME
Sbjct: 138 PPSKPLPMETAVAVATARMSVDSGRRIFRGKSLRENALMRRFVVAEEEAIMENRKRDQME 197

Query: 138 VIKRRRSVMRREKLGPSPLS 149
           ++++R  + R++KLGPSPLS
Sbjct: 198 IVRKRNQMRRKKKLGPSPLS 216

The following BLAST results are available for this feature:

BLAST of Tan0006603.1 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0006603.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515076.1	1.4e-29	55.13	uncharacterized protein LOC111779211 [Cucurbita pepo subsp. pepo]	[more]
XP_023004121.1	4.2e-29	53.80	uncharacterized protein LOC111497548 [Cucurbita maxima]	[more]
GAV66533.1	2.7e-28	54.22	hypothetical protein CFOL_v3_10043 [Cephalotus follicularis]	[more]
XP_022960213.1	3.5e-28	54.43	uncharacterized protein LOC111461019 [Cucurbita moschata]	[more]
XP_019420544.1	4.6e-28	55.42	PREDICTED: uncharacterized protein LOC109330718 [Lupinus angustifolius]	[more]

BLAST of Tan0006603.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KR77	2.0e-29	53.80	uncharacterized protein LOC111497548 OS=Cucurbita maxima OX=3661 GN=LOC111497548...	[more]
A0A1Q3BFH0	1.3e-28	54.22	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10043 PE=4...	[more]
A0A6J1H871	1.7e-28	54.43	uncharacterized protein LOC111461019 OS=Cucurbita moschata OX=3662 GN=LOC1114610...	[more]
A0A1J7GJ16	2.2e-28	55.42	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_18294 PE=4 S...	[more]
A0A6A1VRZ8	3.8e-28	53.37	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G000481 PE=4 SV=1	[more]

BLAST of Tan0006603.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59680.1	5.3e-22	42.86	unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bac...	[more]
AT3G59680.2	5.3e-22	42.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..90
None	No IPR available	PANTHER	PTHR36772	SERINE/THREONINE-KINASE	coord: 12..148

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0006603	Tan0006603	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006603.1-exon	Tan0006603.1-exon-LG10:19368275..19368721	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006603.1-cds	Tan0006603.1-cds-LG10:19368275..19368721	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0006603.1	Tan0006603.1-protein	polypeptide