Tan0006009.1 (mRNA) Snake gourd v1

Overview


Name	Tan0006009.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	nuclear transcription factor Y subunit B-3-like
Location	LG05: 8191785 .. 8193745 (+)
Sequence length	1864
RNA-Seq Expression	Tan0006009.1
Synteny	Tan0006009.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCAAGATATTTAAAAAAAATACAGGATAGTTCTCAGTTGCTAGTGTTCTACCGGAAAACTAAACAAATAAAAAAGCTACCAATCTTCACTTGCCACGTAACATAATGCTCACCGTTAGATCACCGCCGTTCCTTAGCCAATCCAACGCTCCAGAAACTTCCACGAAGCGCACTCTTATCGACAAATAAACGGTGAGTAACGAGACACGTGTCGCTCCCGATTACATTATTAGCCCAAACGACGCGACGGACTCTTAACAACTCCTCTTCTGCAGCACCCATCACCTGTTTTCTTCCAGTGTTTCTTCACCGGCGGCGACTTTCCCGATTCTCCAATATCCCTCTTTACTTCAGAATTCCGGCTCCGGTGTCCGTGTCCCTATAAACTCCGGTCAATCCTTGATCGACAAACCGAACTCTCCAAAAATCATTCATCATCTCTCTCTATTACCGCAATTTGATTTTTCTTCTTGTCTCTTCAATTGCAGGATAATCGGTCGTTCTTCTCCGTTCGCATCGCGGGCGCTGGAATATCGTATCTCGTGTCTGATTATTATCTGATTCCTTTTCAATTCTTGACGGAGTTTGTCTTTATTCTTCTTTCTAACTTGAGGAGTTTCAGAAGTAGAACTTCGCGGATGATGATGATTTGTTGTTTCTTGATACGATACTGGAATCGAAATTAGGCGTTTTAGGTCAACCGAGTTTAGCAATTCGATTTCTCTTCTACTTTCTTTCTTTATTTGTTCTGTGAGAGAACGAATCGTATCCGTCAATTTTTATAGCGAAAAGTGGAAGGATTCGGTCTGTATTCTTCCGTAACCTAAATTGATAGTTAAGGAAAGTCCTCGGCGTCGTTCTTGTGAGAATGGATCGAGAGGAGGAAAGATTTATAGCTATAAGTCGTTGAACTCGCGTCTACTTTCAGAAGTGGTAGTGAGATTGAGGAATTAGGAGAAATTAGAGCGAGAGGCGTTTTTGTTTGTTCGTTGTTTGAGATTTGGAAATGGCGGATTCGGATAACGAATCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTATCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTACCAGCAAACGCGAAGATCTCGAAAGATGCGAAAGAAACCGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTGGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGAGAAATGGAAGGGGAAAAGAGCACTATGGGAAGACAAGGGGAGAAGGACGGTGGTGGTAGTGGTGGTGGGCCCGGCGGCAGTGGGGCTAATGGTGGTGGAGGAGTCAACCCTGGTACTGGTGGTGGTGCCGGCGGCGGCGGATTTAACGGAGTGGGTGGAATGTACGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCGGCGGTGGATTTCACCACATGGGAATCGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACCGGACACCGGTAGTTCCGGCGGTGGTGGGACTGCTGCAAGGTCAAGCTAAGTGGTTGCTAGTTGGAACCTTTTTAAAGGTTCTCTCCAACTTTTGAGCATCATTGATGACTTTTTAGGAAGTTAATAATATTTTTAATTTTTTTTCTCTTCCTTTCTTTTGGGTATTGAAAGTTGTGGAAAACTACTTTGAGTCTCTGTCAAATTTCTCTATTTTTCTTTACTTTTTCCTTTTTTTTTTTTTTGGTATAAATGTAATTTGTGTATCTTGTGTGTAAGAGCGATATGATAATGTGATGCATTTGTACAAGTGTAACCTCTAATTTTACACCACTACTAATTCTTATGATC

mRNA sequence

GCCCAAGATATTTAAAAAAAATACAGGATAGTTCTCAGTTGCTAGTGTTCTACCGGAAAACTAAACAAATAAAAAAGCTACCAATCTTCACTTGCCACGTAACATAATGCTCACCGTTAGATCACCGCCGTTCCTTAGCCAATCCAACGCTCCAGAAACTTCCACGAAGCGCACTCTTATCGACAAATAAACGGTGAGTAACGAGACACGTGTCGCTCCCGATTACATTATTAGCCCAAACGACGCGACGGACTCTTAACAACTCCTCTTCTGCAGCACCCATCACCTGTTTTCTTCCAGTGTTTCTTCACCGGCGGCGACTTTCCCGATTCTCCAATATCCCTCTTTACTTCAGAATTCCGGCTCCGGTGTCCGTGTCCCTATAAACTCCGGATAATCGGTCGTTCTTCTCCGTTCGCATCGCGGGCGCTGGAATATCGTATCTCGTGTCTGATTATTATCTGATTCCTTTTCAATTCTTGACGGAGTTTGTCTTTATTCTTCTTTCTAACTTGAGGAGTTTCAGAAGTAGAACTTCGCGGATGATGATGATTTGTTGTTTCTTGATACGATACTGGAATCGAAATTAGGCGTTTTAGGTCAACCGAGTTTAGCAATTCGATTTCTCTTCTACTTTCTTTCTTTATTTGTTCTGTGAGAGAACGAATCGTATCCGTCAATTTTTATAGCGAAAAGTGGAAGGATTCGGTCTGTATTCTTCCGTAACCTAAATTGATAGTTAAGGAAAGTCCTCGGCGTCGTTCTTGTGAGAATGGATCGAGAGGAGGAAAGATTTATAGCTATAAGTCGTTGAACTCGCGTCTACTTTCAGAAGTGGTAGTGAGATTGAGGAATTAGGAGAAATTAGAGCGAGAGGCGTTTTTGTTTGTTCGTTGTTTGAGATTTGGAAATGGCGGATTCGGATAACGAATCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTATCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTACCAGCAAACGCGAAGATCTCGAAAGATGCGAAAGAAACCGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTGGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGAGAAATGGAAGGGGAAAAGAGCACTATGGGAAGACAAGGGGAGAAGGACGGTGGTGGTAGTGGTGGTGGGCCCGGCGGCAGTGGGGCTAATGGTGGTGGAGGAGTCAACCCTGGTACTGGTGGTGGTGCCGGCGGCGGCGGATTTAACGGAGTGGGTGGAATGTACGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCGGCGGTGGATTTCACCACATGGGAATCGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACCGGACACCGGTAGTTCCGGCGGTGGTGGGACTGCTGCAAGGTCAAGCTAAGTGGTTGCTAGTTGGAACCTTTTTAAAGGTTCTCTCCAACTTTTGAGCATCATTGATGACTTTTTAGGAAGTTAATAATATTTTTAATTTTTTTTCTCTTCCTTTCTTTTGGGTATTGAAAGTTGTGGAAAACTACTTTGAGTCTCTGTCAAATTTCTCTATTTTTCTTTACTTTTTCCTTTTTTTTTTTTTTGGTATAAATGTAATTTGTGTATCTTGTGTGTAAGAGCGATATGATAATGTGATGCATTTGTACAAGTGTAACCTCTAATTTTACACCACTACTAATTCTTATGATC

Coding sequence (CDS)

ATGGCGGATTCGGATAACGAATCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTATCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTACCAGCAAACGCGAAGATCTCGAAAGATGCGAAAGAAACCGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTGGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGAGAAATGGAAGGGGAAAAGAGCACTATGGGAAGACAAGGGGAGAAGGACGGTGGTGGTAGTGGTGGTGGGCCCGGCGGCAGTGGGGCTAATGGTGGTGGAGGAGTCAACCCTGGTACTGGTGGTGGTGCCGGCGGCGGCGGATTTAACGGAGTGGGTGGAATGTACGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCGGCGGTGGATTTCACCACATGGGAATCGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACCGGACACCGGTAG

Protein sequence

MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR

Homology

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BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53
Identity = 124/154 (80.52%), Postives = 133/154 (86.36%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGG 154
            GRQG+K+GGG GGG G    +G GG  P  GGG
Sbjct: 121 AGRQGDKEGGGGGGGAG----SGSGGA-PMYGGG 147

[Close]

BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-44
Identity = 136/231 (58.87%), Postives = 152/231 (65.80%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           M DSDNESGG  SNA    SA+EQDRFLPIANVSRIMK+ALPANAKISKDAKETVQECVS
Sbjct: 1   MPDSDNESGG-PSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+Y++PLK YL K+RE+EGEK+  
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKAI- 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGMYGG----MMMMG--- 180
                   G +G G GG+ ++GG G   G+         NG  GMYGG    +MMMG   
Sbjct: 121 --------GAAGSGGGGAASSGGSGSGSGSHHHQDASRNNGGYGMYGGGGGMIMMMGQPM 180

Query: 181 -------------------HHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
                              HH   V GG G +  G GGG G S  SG G +
Sbjct: 181 YGSPPASSAGYAQPPPPHHHHHQMVMGGKGAYGHGGGGGGGPSPSSGYGRQ 221

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BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.6e-42
Identity = 121/208 (58.17%), Postives = 139/208 (66.83%), Query Frame = 0


Query: 1   MADSDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGM-YGGMMMMGHH 180
           ++ +GR                   G  G +     G GGG + G GGM Y       H 
Sbjct: 121 RTGLGR---------------PQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQ 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTG 204
           Q  +YG         GGG    GG+ +G
Sbjct: 181 QNHMYG-------ATGGGSDSGGGAASG 186

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BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.1e-41
Identity = 131/215 (60.93%), Postives = 145/215 (67.44%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSA-KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60
           M DSDN+SGG ++ A  ELS+ +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV
Sbjct: 1   MPDSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60

Query: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKST 120
           SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YV+PLK YL K+RE+EGE++ 
Sbjct: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERAA 120

Query: 121 MGRQGEKDGGGSGGGPGGS-GANGGGGVNPGTGGGAGGGGFNGVGG--MYGG------MM 180
               G      S   P     AN  GG       GAG GG   + G  MYG         
Sbjct: 121 ASTTGAGTSAASTTPPQQQHTANAAGGYAGYAAPGAGPGGMMMMMGQPMYGSPPPPPQQQ 180

Query: 181 MMGHHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
              HH   + G GGF H   GGG G S  SG G +
Sbjct: 181 QQQHHHMAMGGRGGFGHHPGGGGGGSSSSSGHGRQ 215

[Close]

BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: Q0J7P4 (Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=39947 GN=HD5 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.6e-35
Identity = 114/194 (58.76%), Postives = 134/194 (69.07%), Query Frame = 0


Query: 11  HNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEA 70
           +      +  AKEQDRFLPIANVSRIMK++LPANAKISK++KETVQECVSEFISF+TGEA
Sbjct: 46  YGGGGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEA 105

Query: 71  SDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGGG 130
           SDKCQREKRKTINGDDLLWAMTTLGFE YV PLK+YL +YRE EGEK+ +        GG
Sbjct: 106 SDKCQREKRKTINGDDLLWAMTTLGFEAYVGPLKSYLNRYREAEGEKADV-------LGG 165

Query: 131 SGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGVYGGGGFHHMGI 190
           +GG    +  +G GG   G GGGA G   +G   + GG +   HH      GGG   + +
Sbjct: 166 AGG--AAAARHGEGGCCGGGGGGADGVVIDGHYPLAGG-LSHSHHGHQQQDGGGDVGLMM 225

Query: 191 GGGKGGSG-GSGTG 204
           GGG  G G  +G G
Sbjct: 226 GGGDAGVGYNAGAG 229

[Close]

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_023532503.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 197/207 (95.17%), Postives = 200/207 (96.62%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN-GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHHQGG 180
            G +GEKDGGG GGGPGGSGAN GGGGVNPGTGGG  GGGFNGVGGMYGGMMMMGHHQGG
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMGHHQGG 180

Query: 181 VYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           VYG GGFHHMGIGGGKGG+GGSGTGHR
Sbjct: 181 VYGSGGFHHMGIGGGKGGNGGSGTGHR 207

[Close]

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_022947534.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918.1 Nuclear transcription factor Y subunit B-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.0 bits (868), Expect = 2.9e-89
Identity = 196/210 (93.33%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN----GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHH 180
            G +GEKDGGG GGGPGGSGAN    GGGGVNPGTGGG  GGGFNGVGGMYGGMMMMGHH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMGHH 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           QGGVYG GGFH MGIGGGKGG+GGSGTGHR
Sbjct: 181 QGGVYGSGGFHQMGIGGGKGGNGGSGTGHR 210

[Close]

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_022971106.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita maxima])

HSP 1 Score: 338.6 bits (867), Expect = 3.8e-89
Identity = 196/210 (93.33%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN----GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHH 180
            G +GEKDGGG GGGPGGSGAN    GGGGVNPGTGGG  GGGFNGVGGMYGGMMMM HH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMVHH 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           QGGVYG GGFHHMGIGGGKGG+GGSGTGHR
Sbjct: 181 QGGVYGSGGFHHMGIGGGKGGNGGSGTGHR 210

[Close]

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_008464158.1 (PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_008464159.1 PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >KAA0060811.1 nuclear transcription factor Y subunit B-3 [Cucumis melo var. makuwa] >TYK08821.1 nuclear transcription factor Y subunit B-3 [Cucumis melo var. makuwa])

HSP 1 Score: 325.5 bits (833), Expect = 3.3e-85
Identity = 190/206 (92.23%), Postives = 192/206 (93.20%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVN-PGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGV 180
           GRQGEKDGG  GGGPGGS    GGGVN  GT  G  GGG+NGVGGMYGG+MMMGHHQGGV
Sbjct: 121 GRQGEKDGG--GGGPGGS----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGV 180

Query: 181 YGGGGFHHMGIGGGKGGSGGSGTGHR 206
           YGG GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 YGGAGFHHMGIGGGKGGSGASGTGHR 200

[Close]

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_038901772.1 (nuclear transcription factor Y subunit B-3 [Benincasa hispida] >XP_038901773.1 nuclear transcription factor Y subunit B-3 [Benincasa hispida])

HSP 1 Score: 323.9 bits (829), Expect = 9.7e-85
Identity = 193/209 (92.34%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNG--VGGMYGGMMMMG--HHQ 180
           GRQGEKDGG  GGGPGGSGANGGGG     GGG GGGG N    GGMYGGMMMMG  HHQ
Sbjct: 121 GRQGEKDGG--GGGPGGSGANGGGG-----GGGGGGGGVNSGTTGGMYGGMMMMGHHHHQ 180

Query: 181 GGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           GGVYGGGGFHHMGIGGGKGGSGGSGTGHR
Sbjct: 181 GGVYGGGGFHHMGIGGGKGGSGGSGTGHR 202

[Close]

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A6J1G731 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN=LOC111451370 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 196/210 (93.33%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN----GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHH 180
            G +GEKDGGG GGGPGGSGAN    GGGGVNPGTGGG  GGGFNGVGGMYGGMMMMGHH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMGHH 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           QGGVYG GGFH MGIGGGKGG+GGSGTGHR
Sbjct: 181 QGGVYGSGGFHQMGIGGGKGGNGGSGTGHR 210

[Close]

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A6J1I2E0 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469875 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.8e-89
Identity = 196/210 (93.33%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN----GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHH 180
            G +GEKDGGG GGGPGGSGAN    GGGGVNPGTGGG  GGGFNGVGGMYGGMMMM HH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMVHH 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           QGGVYG GGFHHMGIGGGKGG+GGSGTGHR
Sbjct: 181 QGGVYGSGGFHHMGIGGGKGGNGGSGTGHR 210

[Close]

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A1S3CMC5 (nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC103502105 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.6e-85
Identity = 190/206 (92.23%), Postives = 192/206 (93.20%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVN-PGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGV 180
           GRQGEKDGG  GGGPGGS    GGGVN  GT  G  GGG+NGVGGMYGG+MMMGHHQGGV
Sbjct: 121 GRQGEKDGG--GGGPGGS----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGV 180

Query: 181 YGGGGFHHMGIGGGKGGSGGSGTGHR 206
           YGG GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 YGGAGFHHMGIGGGKGGSGASGTGHR 200

[Close]

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A5A7V4W8 (Nuclear transcription factor Y subunit B-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00280 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.6e-85
Identity = 190/206 (92.23%), Postives = 192/206 (93.20%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVN-PGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGV 180
           GRQGEKDGG  GGGPGGS    GGGVN  GT  G  GGG+NGVGGMYGG+MMMGHHQGGV
Sbjct: 121 GRQGEKDGG--GGGPGGS----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGV 180

Query: 181 YGGGGFHHMGIGGGKGGSGGSGTGHR 206
           YGG GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 YGGAGFHHMGIGGGKGGSGASGTGHR 200

[Close]

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A0A0KFU2 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G112490 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83
Identity = 189/207 (91.30%), Postives = 191/207 (92.27%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVN-PGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGV 180
           GRQGEKDGG  GGGPGGS    GGGVN  G   G  GGG+NGVGGMYGG+MMMGHHQGGV
Sbjct: 121 GRQGEKDGG--GGGPGGS----GGGVNSSGAAAGGAGGGYNGVGGMYGGVMMMGHHQGGV 180

Query: 181 YGGGGFHHMGIGGGKGGSGG-SGTGHR 206
           YGG GFHHMGIG GKGGSGG SGTGHR
Sbjct: 181 YGGAGFHHMGIGSGKGGSGGASGTGHR 201

[Close]

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 211.1 bits (536), Expect = 8.6e-55
Identity = 124/154 (80.52%), Postives = 133/154 (86.36%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGG 154
            GRQG+K+GGG GGG G    +G GG  P  GGG
Sbjct: 121 AGRQGDKEGGGGGGGAG----SGSGGA-PMYGGG 147

[Close]

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-43
Identity = 121/208 (58.17%), Postives = 139/208 (66.83%), Query Frame = 0


Query: 1   MADSDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGM-YGGMMMMGHH 180
           ++ +GR                   G  G +     G GGG + G GGM Y       H 
Sbjct: 121 RTGLGR---------------PQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQ 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTG 204
           Q  +YG         GGG    GG+ +G
Sbjct: 181 QNHMYG-------ATGGGSDSGGGAASG 186

[Close]

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 169.1 bits (427), Expect = 3.7e-42
Identity = 88/138 (63.77%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANS------ELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKET 60
           MA+S    GG  S+ +        L+ +EQDRFLPIAN+SRIMK+ LP N KI+KDAKET
Sbjct: 1   MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKET 60

Query: 61  VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREME 120
           +QECVSEFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y++PLK YL +YREME
Sbjct: 61  MQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREME 120

Query: 121 GEKSTMGRQGEKDGGGSG 133
           G+    G+ GE      G
Sbjct: 121 GDTKGSGKGGESSAKRDG 138

[Close]

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 168.7 bits (426), Expect = 4.9e-42
Identity = 87/126 (69.05%), Postives = 103/126 (81.75%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           +A+++  S    +N N+  + KEQDRFLPIANV RIMKK LP N KISKDAKETVQECVS
Sbjct: 15  VAETNPGSPSSKTNNNNN-NNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVS 74

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISF+TGEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLK YL KYR+ EGEK   
Sbjct: 75  EFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNS 134

Query: 121 GRQGEK 127
            +Q ++
Sbjct: 135 PKQQQQ 139

[Close]

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 166.4 bits (420), Expect = 2.4e-41
Identity = 88/137 (64.23%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAD+ +   G    +    S +EQDR+LPIAN+SRIMKKALP N KI KDAK+TVQECVS
Sbjct: 1   MADTPSSPAGDGGESGG--SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+EPLK YL +YRE+EG+    
Sbjct: 61  EFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGS 120

Query: 121 GRQGEKDGGGSGGGPGG 138
           G+ G+     +GGG  G
Sbjct: 121 GKSGDGSNRDAGGGVSG 135

The following BLAST results are available for this feature:

BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23310	1.2e-53	80.52	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q69J40	3.0e-44	58.87	Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9FGJ3	3.6e-42	58.17	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q75IZ7	3.1e-41	60.93	Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q0J7P4	5.6e-35	58.76	Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Tan0006009.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532503.1	1.5e-90	95.17	nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022947534.1	2.9e-89	93.33	nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918...	[more]
XP_022971106.1	3.8e-89	93.33	nuclear transcription factor Y subunit B-3-like [Cucurbita maxima]	[more]
XP_008464158.1	3.3e-85	92.23	PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_0084641...	[more]
XP_038901772.1	9.7e-85	92.34	nuclear transcription factor Y subunit B-3 [Benincasa hispida] >XP_038901773.1 n...	[more]

BLAST of Tan0006009.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G731	1.4e-89	93.33	nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I2E0	1.8e-89	93.33	nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3CMC5	1.6e-85	92.23	nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC1035021...	[more]
A0A5A7V4W8	1.6e-85	92.23	Nuclear transcription factor Y subunit B-3 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0KFU2	1.5e-83	91.30	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1124...	[more]

BLAST of Tan0006009.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14540.1	8.6e-55	80.52	nuclear factor Y, subunit B3	[more]
AT5G47640.1	2.6e-43	58.17	nuclear factor Y, subunit B2	[more]
AT3G53340.1	3.7e-42	63.77	nuclear factor Y, subunit B10	[more]
AT2G13570.1	4.9e-42	69.05	nuclear factor Y, subunit B7	[more]
AT2G38880.2	2.4e-41	64.23	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 74..92 score: 38.52 coord: 93..111 score: 44.86 coord: 55..73 score: 50.24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11064:SF128	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3	coord: 1..181
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 27..91 e-value: 1.9E-27 score: 95.3
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 15..132 e-value: 1.1E-47 score: 163.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 24..128
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..181
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 58..74

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0006009	Tan0006009	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006009.1-five_prime_utr	Tan0006009.1-five_prime_utr-LG05:8191785..8192176	five_prime_UTR
Tan0006009.1-five_prime_utr	Tan0006009.1-five_prime_utr-LG05:8192274..8192791	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006009.1-exon	Tan0006009.1-exon-LG05:8191785..8192176	exon
Tan0006009.1-exon	Tan0006009.1-exon-LG05:8192274..8193745	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006009.1-cds	Tan0006009.1-cds-LG05:8192792..8193409	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006009.1-three_prime_utr	Tan0006009.1-three_prime_utr-LG05:8193410..8193745	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0006009.1	Tan0006009.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding