Tan0006009.1 (mRNA) Snake gourd v1

Overview
NameTan0006009.1
TypemRNA
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionnuclear transcription factor Y subunit B-3-like
LocationLG05: 8191785 .. 8193745 (+)
Sequence length1864
RNA-Seq ExpressionTan0006009.1
SyntenyTan0006009.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCCAAGATATTTAAAAAAAATACAGGATAGTTCTCAGTTGCTAGTGTTCTACCGGAAAACTAAACAAATAAAAAAGCTACCAATCTTCACTTGCCACGTAACATAATGCTCACCGTTAGATCACCGCCGTTCCTTAGCCAATCCAACGCTCCAGAAACTTCCACGAAGCGCACTCTTATCGACAAATAAACGGTGAGTAACGAGACACGTGTCGCTCCCGATTACATTATTAGCCCAAACGACGCGACGGACTCTTAACAACTCCTCTTCTGCAGCACCCATCACCTGTTTTCTTCCAGTGTTTCTTCACCGGCGGCGACTTTCCCGATTCTCCAATATCCCTCTTTACTTCAGAATTCCGGCTCCGGTGTCCGTGTCCCTATAAACTCCGGTCAATCCTTGATCGACAAACCGAACTCTCCAAAAATCATTCATCATCTCTCTCTATTACCGCAATTTGATTTTTCTTCTTGTCTCTTCAATTGCAGGATAATCGGTCGTTCTTCTCCGTTCGCATCGCGGGCGCTGGAATATCGTATCTCGTGTCTGATTATTATCTGATTCCTTTTCAATTCTTGACGGAGTTTGTCTTTATTCTTCTTTCTAACTTGAGGAGTTTCAGAAGTAGAACTTCGCGGATGATGATGATTTGTTGTTTCTTGATACGATACTGGAATCGAAATTAGGCGTTTTAGGTCAACCGAGTTTAGCAATTCGATTTCTCTTCTACTTTCTTTCTTTATTTGTTCTGTGAGAGAACGAATCGTATCCGTCAATTTTTATAGCGAAAAGTGGAAGGATTCGGTCTGTATTCTTCCGTAACCTAAATTGATAGTTAAGGAAAGTCCTCGGCGTCGTTCTTGTGAGAATGGATCGAGAGGAGGAAAGATTTATAGCTATAAGTCGTTGAACTCGCGTCTACTTTCAGAAGTGGTAGTGAGATTGAGGAATTAGGAGAAATTAGAGCGAGAGGCGTTTTTGTTTGTTCGTTGTTTGAGATTTGGAAATGGCGGATTCGGATAACGAATCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTATCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTACCAGCAAACGCGAAGATCTCGAAAGATGCGAAAGAAACCGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTGGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGAGAAATGGAAGGGGAAAAGAGCACTATGGGAAGACAAGGGGAGAAGGACGGTGGTGGTAGTGGTGGTGGGCCCGGCGGCAGTGGGGCTAATGGTGGTGGAGGAGTCAACCCTGGTACTGGTGGTGGTGCCGGCGGCGGCGGATTTAACGGAGTGGGTGGAATGTACGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCGGCGGTGGATTTCACCACATGGGAATCGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACCGGACACCGGTAGTTCCGGCGGTGGTGGGACTGCTGCAAGGTCAAGCTAAGTGGTTGCTAGTTGGAACCTTTTTAAAGGTTCTCTCCAACTTTTGAGCATCATTGATGACTTTTTAGGAAGTTAATAATATTTTTAATTTTTTTTCTCTTCCTTTCTTTTGGGTATTGAAAGTTGTGGAAAACTACTTTGAGTCTCTGTCAAATTTCTCTATTTTTCTTTACTTTTTCCTTTTTTTTTTTTTTGGTATAAATGTAATTTGTGTATCTTGTGTGTAAGAGCGATATGATAATGTGATGCATTTGTACAAGTGTAACCTCTAATTTTACACCACTACTAATTCTTATGATC

mRNA sequence

GCCCAAGATATTTAAAAAAAATACAGGATAGTTCTCAGTTGCTAGTGTTCTACCGGAAAACTAAACAAATAAAAAAGCTACCAATCTTCACTTGCCACGTAACATAATGCTCACCGTTAGATCACCGCCGTTCCTTAGCCAATCCAACGCTCCAGAAACTTCCACGAAGCGCACTCTTATCGACAAATAAACGGTGAGTAACGAGACACGTGTCGCTCCCGATTACATTATTAGCCCAAACGACGCGACGGACTCTTAACAACTCCTCTTCTGCAGCACCCATCACCTGTTTTCTTCCAGTGTTTCTTCACCGGCGGCGACTTTCCCGATTCTCCAATATCCCTCTTTACTTCAGAATTCCGGCTCCGGTGTCCGTGTCCCTATAAACTCCGGATAATCGGTCGTTCTTCTCCGTTCGCATCGCGGGCGCTGGAATATCGTATCTCGTGTCTGATTATTATCTGATTCCTTTTCAATTCTTGACGGAGTTTGTCTTTATTCTTCTTTCTAACTTGAGGAGTTTCAGAAGTAGAACTTCGCGGATGATGATGATTTGTTGTTTCTTGATACGATACTGGAATCGAAATTAGGCGTTTTAGGTCAACCGAGTTTAGCAATTCGATTTCTCTTCTACTTTCTTTCTTTATTTGTTCTGTGAGAGAACGAATCGTATCCGTCAATTTTTATAGCGAAAAGTGGAAGGATTCGGTCTGTATTCTTCCGTAACCTAAATTGATAGTTAAGGAAAGTCCTCGGCGTCGTTCTTGTGAGAATGGATCGAGAGGAGGAAAGATTTATAGCTATAAGTCGTTGAACTCGCGTCTACTTTCAGAAGTGGTAGTGAGATTGAGGAATTAGGAGAAATTAGAGCGAGAGGCGTTTTTGTTTGTTCGTTGTTTGAGATTTGGAAATGGCGGATTCGGATAACGAATCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTATCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTACCAGCAAACGCGAAGATCTCGAAAGATGCGAAAGAAACCGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTGGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGAGAAATGGAAGGGGAAAAGAGCACTATGGGAAGACAAGGGGAGAAGGACGGTGGTGGTAGTGGTGGTGGGCCCGGCGGCAGTGGGGCTAATGGTGGTGGAGGAGTCAACCCTGGTACTGGTGGTGGTGCCGGCGGCGGCGGATTTAACGGAGTGGGTGGAATGTACGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCGGCGGTGGATTTCACCACATGGGAATCGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACCGGACACCGGTAGTTCCGGCGGTGGTGGGACTGCTGCAAGGTCAAGCTAAGTGGTTGCTAGTTGGAACCTTTTTAAAGGTTCTCTCCAACTTTTGAGCATCATTGATGACTTTTTAGGAAGTTAATAATATTTTTAATTTTTTTTCTCTTCCTTTCTTTTGGGTATTGAAAGTTGTGGAAAACTACTTTGAGTCTCTGTCAAATTTCTCTATTTTTCTTTACTTTTTCCTTTTTTTTTTTTTTGGTATAAATGTAATTTGTGTATCTTGTGTGTAAGAGCGATATGATAATGTGATGCATTTGTACAAGTGTAACCTCTAATTTTACACCACTACTAATTCTTATGATC

Coding sequence (CDS)

ATGGCGGATTCGGATAACGAATCGGGAGGTCACAACAGCAACGCGAACAGCGAGCTATCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTACCAGCAAACGCGAAGATCTCGAAAGATGCGAAAGAAACCGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTGGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGAGAAATGGAAGGGGAAAAGAGCACTATGGGAAGACAAGGGGAGAAGGACGGTGGTGGTAGTGGTGGTGGGCCCGGCGGCAGTGGGGCTAATGGTGGTGGAGGAGTCAACCCTGGTACTGGTGGTGGTGCCGGCGGCGGCGGATTTAACGGAGTGGGTGGAATGTACGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCGGCGGTGGATTTCACCACATGGGAATCGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACCGGACACCGGTAG

Protein sequence

MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR
Homology
BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53
Identity = 124/154 (80.52%), Postives = 133/154 (86.36%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGG 154
            GRQG+K+GGG GGG G    +G GG  P  GGG
Sbjct: 121 AGRQGDKEGGGGGGGAG----SGSGGA-PMYGGG 147

BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-44
Identity = 136/231 (58.87%), Postives = 152/231 (65.80%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           M DSDNESGG  SNA    SA+EQDRFLPIANVSRIMK+ALPANAKISKDAKETVQECVS
Sbjct: 1   MPDSDNESGG-PSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+Y++PLK YL K+RE+EGEK+  
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKAI- 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGMYGG----MMMMG--- 180
                   G +G G GG+ ++GG G   G+         NG  GMYGG    +MMMG   
Sbjct: 121 --------GAAGSGGGGAASSGGSGSGSGSHHHQDASRNNGGYGMYGGGGGMIMMMGQPM 180

Query: 181 -------------------HHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
                              HH   V GG G +  G GGG G S  SG G +
Sbjct: 181 YGSPPASSAGYAQPPPPHHHHHQMVMGGKGAYGHGGGGGGGPSPSSGYGRQ 221

BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.6e-42
Identity = 121/208 (58.17%), Postives = 139/208 (66.83%), Query Frame = 0

Query: 1   MADSDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGM-YGGMMMMGHH 180
           ++ +GR                   G  G +     G GGG + G GGM Y       H 
Sbjct: 121 RTGLGR---------------PQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQ 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTG 204
           Q  +YG         GGG    GG+ +G
Sbjct: 181 QNHMYG-------ATGGGSDSGGGAASG 186

BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.1e-41
Identity = 131/215 (60.93%), Postives = 145/215 (67.44%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSA-KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60
           M DSDN+SGG ++ A  ELS+ +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV
Sbjct: 1   MPDSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60

Query: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKST 120
           SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YV+PLK YL K+RE+EGE++ 
Sbjct: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERAA 120

Query: 121 MGRQGEKDGGGSGGGPGGS-GANGGGGVNPGTGGGAGGGGFNGVGG--MYGG------MM 180
               G      S   P     AN  GG       GAG GG   + G  MYG         
Sbjct: 121 ASTTGAGTSAASTTPPQQQHTANAAGGYAGYAAPGAGPGGMMMMMGQPMYGSPPPPPQQQ 180

Query: 181 MMGHHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
              HH   + G GGF H   GGG G S  SG G +
Sbjct: 181 QQQHHHMAMGGRGGFGHHPGGGGGGSSSSSGHGRQ 215

BLAST of Tan0006009.1 vs. ExPASy Swiss-Prot
Match: Q0J7P4 (Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=39947 GN=HD5 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.6e-35
Identity = 114/194 (58.76%), Postives = 134/194 (69.07%), Query Frame = 0

Query: 11  HNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEA 70
           +      +  AKEQDRFLPIANVSRIMK++LPANAKISK++KETVQECVSEFISF+TGEA
Sbjct: 46  YGGGGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEA 105

Query: 71  SDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGGG 130
           SDKCQREKRKTINGDDLLWAMTTLGFE YV PLK+YL +YRE EGEK+ +        GG
Sbjct: 106 SDKCQREKRKTINGDDLLWAMTTLGFEAYVGPLKSYLNRYREAEGEKADV-------LGG 165

Query: 131 SGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGVYGGGGFHHMGI 190
           +GG    +  +G GG   G GGGA G   +G   + GG +   HH      GGG   + +
Sbjct: 166 AGG--AAAARHGEGGCCGGGGGGADGVVIDGHYPLAGG-LSHSHHGHQQQDGGGDVGLMM 225

Query: 191 GGGKGGSG-GSGTG 204
           GGG  G G  +G G
Sbjct: 226 GGGDAGVGYNAGAG 229

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_023532503.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 197/207 (95.17%), Postives = 200/207 (96.62%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN-GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHHQGG 180
            G +GEKDGGG GGGPGGSGAN GGGGVNPGTGGG  GGGFNGVGGMYGGMMMMGHHQGG
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMGHHQGG 180

Query: 181 VYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           VYG GGFHHMGIGGGKGG+GGSGTGHR
Sbjct: 181 VYGSGGFHHMGIGGGKGGNGGSGTGHR 207

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_022947534.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918.1 Nuclear transcription factor Y subunit B-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.0 bits (868), Expect = 2.9e-89
Identity = 196/210 (93.33%), Postives = 199/210 (94.76%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN----GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHH 180
            G +GEKDGGG GGGPGGSGAN    GGGGVNPGTGGG  GGGFNGVGGMYGGMMMMGHH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMGHH 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           QGGVYG GGFH MGIGGGKGG+GGSGTGHR
Sbjct: 181 QGGVYGSGGFHQMGIGGGKGGNGGSGTGHR 210

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_022971106.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita maxima])

HSP 1 Score: 338.6 bits (867), Expect = 3.8e-89
Identity = 196/210 (93.33%), Postives = 199/210 (94.76%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN----GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHH 180
            G +GEKDGGG GGGPGGSGAN    GGGGVNPGTGGG  GGGFNGVGGMYGGMMMM HH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMVHH 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           QGGVYG GGFHHMGIGGGKGG+GGSGTGHR
Sbjct: 181 QGGVYGSGGFHHMGIGGGKGGNGGSGTGHR 210

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_008464158.1 (PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_008464159.1 PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >KAA0060811.1 nuclear transcription factor Y subunit B-3 [Cucumis melo var. makuwa] >TYK08821.1 nuclear transcription factor Y subunit B-3 [Cucumis melo var. makuwa])

HSP 1 Score: 325.5 bits (833), Expect = 3.3e-85
Identity = 190/206 (92.23%), Postives = 192/206 (93.20%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVN-PGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGV 180
           GRQGEKDGG  GGGPGGS    GGGVN  GT  G  GGG+NGVGGMYGG+MMMGHHQGGV
Sbjct: 121 GRQGEKDGG--GGGPGGS----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGV 180

Query: 181 YGGGGFHHMGIGGGKGGSGGSGTGHR 206
           YGG GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 YGGAGFHHMGIGGGKGGSGASGTGHR 200

BLAST of Tan0006009.1 vs. NCBI nr
Match: XP_038901772.1 (nuclear transcription factor Y subunit B-3 [Benincasa hispida] >XP_038901773.1 nuclear transcription factor Y subunit B-3 [Benincasa hispida])

HSP 1 Score: 323.9 bits (829), Expect = 9.7e-85
Identity = 193/209 (92.34%), Postives = 194/209 (92.82%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNG--VGGMYGGMMMMG--HHQ 180
           GRQGEKDGG  GGGPGGSGANGGGG     GGG GGGG N    GGMYGGMMMMG  HHQ
Sbjct: 121 GRQGEKDGG--GGGPGGSGANGGGG-----GGGGGGGGVNSGTTGGMYGGMMMMGHHHHQ 180

Query: 181 GGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           GGVYGGGGFHHMGIGGGKGGSGGSGTGHR
Sbjct: 181 GGVYGGGGFHHMGIGGGKGGSGGSGTGHR 202

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A6J1G731 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN=LOC111451370 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 196/210 (93.33%), Postives = 199/210 (94.76%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN----GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHH 180
            G +GEKDGGG GGGPGGSGAN    GGGGVNPGTGGG  GGGFNGVGGMYGGMMMMGHH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMGHH 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           QGGVYG GGFH MGIGGGKGG+GGSGTGHR
Sbjct: 181 QGGVYGSGGFHQMGIGGGKGGNGGSGTGHR 210

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A6J1I2E0 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469875 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.8e-89
Identity = 196/210 (93.33%), Postives = 199/210 (94.76%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKDGGGSGGGPGGSGAN----GGGGVNPGTGGGAGGGGFNGVGGMYGGMMMMGHH 180
            G +GEKDGGG GGGPGGSGAN    GGGGVNPGTGGG  GGGFNGVGGMYGGMMMM HH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGGVSGGGFNGVGGMYGGMMMMVHH 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 206
           QGGVYG GGFHHMGIGGGKGG+GGSGTGHR
Sbjct: 181 QGGVYGSGGFHHMGIGGGKGGNGGSGTGHR 210

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A1S3CMC5 (nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC103502105 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.6e-85
Identity = 190/206 (92.23%), Postives = 192/206 (93.20%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVN-PGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGV 180
           GRQGEKDGG  GGGPGGS    GGGVN  GT  G  GGG+NGVGGMYGG+MMMGHHQGGV
Sbjct: 121 GRQGEKDGG--GGGPGGS----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGV 180

Query: 181 YGGGGFHHMGIGGGKGGSGGSGTGHR 206
           YGG GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 YGGAGFHHMGIGGGKGGSGASGTGHR 200

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A5A7V4W8 (Nuclear transcription factor Y subunit B-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00280 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.6e-85
Identity = 190/206 (92.23%), Postives = 192/206 (93.20%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVN-PGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGV 180
           GRQGEKDGG  GGGPGGS    GGGVN  GT  G  GGG+NGVGGMYGG+MMMGHHQGGV
Sbjct: 121 GRQGEKDGG--GGGPGGS----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGV 180

Query: 181 YGGGGFHHMGIGGGKGGSGGSGTGHR 206
           YGG GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 YGGAGFHHMGIGGGKGGSGASGTGHR 200

BLAST of Tan0006009.1 vs. ExPASy TrEMBL
Match: A0A0A0KFU2 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G112490 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83
Identity = 189/207 (91.30%), Postives = 191/207 (92.27%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGSGGGPGGSGANGGGGVN-PGTGGGAGGGGFNGVGGMYGGMMMMGHHQGGV 180
           GRQGEKDGG  GGGPGGS    GGGVN  G   G  GGG+NGVGGMYGG+MMMGHHQGGV
Sbjct: 121 GRQGEKDGG--GGGPGGS----GGGVNSSGAAAGGAGGGYNGVGGMYGGVMMMGHHQGGV 180

Query: 181 YGGGGFHHMGIGGGKGGSGG-SGTGHR 206
           YGG GFHHMGIG GKGGSGG SGTGHR
Sbjct: 181 YGGAGFHHMGIGSGKGGSGGASGTGHR 201

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 211.1 bits (536), Expect = 8.6e-55
Identity = 124/154 (80.52%), Postives = 133/154 (86.36%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGG 154
            GRQG+K+GGG GGG G    +G GG  P  GGG
Sbjct: 121 AGRQGDKEGGGGGGGAG----SGSGGA-PMYGGG 147

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-43
Identity = 121/208 (58.17%), Postives = 139/208 (66.83%), Query Frame = 0

Query: 1   MADSDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGGGSGGGPGGSGANGGGGVNPGTGGGAGGGGFNGVGGM-YGGMMMMGHH 180
           ++ +GR                   G  G +     G GGG + G GGM Y       H 
Sbjct: 121 RTGLGR---------------PQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQ 180

Query: 181 QGGVYGGGGFHHMGIGGGKGGSGGSGTG 204
           Q  +YG         GGG    GG+ +G
Sbjct: 181 QNHMYG-------ATGGGSDSGGGAASG 186

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 169.1 bits (427), Expect = 3.7e-42
Identity = 88/138 (63.77%), Postives = 104/138 (75.36%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANS------ELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKET 60
           MA+S    GG  S+ +        L+ +EQDRFLPIAN+SRIMK+ LP N KI+KDAKET
Sbjct: 1   MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKET 60

Query: 61  VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREME 120
           +QECVSEFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y++PLK YL +YREME
Sbjct: 61  MQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREME 120

Query: 121 GEKSTMGRQGEKDGGGSG 133
           G+    G+ GE      G
Sbjct: 121 GDTKGSGKGGESSAKRDG 138

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 168.7 bits (426), Expect = 4.9e-42
Identity = 87/126 (69.05%), Postives = 103/126 (81.75%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           +A+++  S    +N N+  + KEQDRFLPIANV RIMKK LP N KISKDAKETVQECVS
Sbjct: 15  VAETNPGSPSSKTNNNNN-NNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVS 74

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISF+TGEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLK YL KYR+ EGEK   
Sbjct: 75  EFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNS 134

Query: 121 GRQGEK 127
            +Q ++
Sbjct: 135 PKQQQQ 139

BLAST of Tan0006009.1 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 166.4 bits (420), Expect = 2.4e-41
Identity = 88/137 (64.23%), Postives = 105/137 (76.64%), Query Frame = 0

Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAD+ +   G    +    S +EQDR+LPIAN+SRIMKKALP N KI KDAK+TVQECVS
Sbjct: 1   MADTPSSPAGDGGESGG--SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+EPLK YL +YRE+EG+    
Sbjct: 61  EFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGS 120

Query: 121 GRQGEKDGGGSGGGPGG 138
           G+ G+     +GGG  G
Sbjct: 121 GKSGDGSNRDAGGGVSG 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O233101.2e-5380.52Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
Q69J403.0e-4458.87Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3... [more]
Q9FGJ33.6e-4258.17Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
Q75IZ73.1e-4160.93Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39... [more]
Q0J7P45.6e-3558.76Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=3... [more]
Match NameE-valueIdentityDescription
XP_023532503.11.5e-9095.17nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo][more]
XP_022947534.12.9e-8993.33nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918... [more]
XP_022971106.13.8e-8993.33nuclear transcription factor Y subunit B-3-like [Cucurbita maxima][more]
XP_008464158.13.3e-8592.23PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_0084641... [more]
XP_038901772.19.7e-8592.34nuclear transcription factor Y subunit B-3 [Benincasa hispida] >XP_038901773.1 n... [more]
Match NameE-valueIdentityDescription
A0A6J1G7311.4e-8993.33nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1I2E01.8e-8993.33nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3CMC51.6e-8592.23nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC1035021... [more]
A0A5A7V4W81.6e-8592.23Nuclear transcription factor Y subunit B-3 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A0A0KFU21.5e-8391.30CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1124... [more]
Match NameE-valueIdentityDescription
AT4G14540.18.6e-5580.52nuclear factor Y, subunit B3 [more]
AT5G47640.12.6e-4358.17nuclear factor Y, subunit B2 [more]
AT3G53340.13.7e-4263.77nuclear factor Y, subunit B10 [more]
AT2G13570.14.9e-4269.05nuclear factor Y, subunit B7 [more]
AT2G38880.22.4e-4164.23nuclear factor Y, subunit B1 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00615CCAATSUBUNTAcoord: 74..92
score: 38.52
coord: 93..111
score: 44.86
coord: 55..73
score: 50.24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR11064:SF128NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3coord: 1..181
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 27..91
e-value: 1.9E-27
score: 95.3
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 15..132
e-value: 1.1E-47
score: 163.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 24..128
IPR027113Transcription factor NFYB/HAP3PANTHERPTHR11064CCAAT-BINDING TRANSCRIPTION FACTOR-RELATEDcoord: 1..181
IPR003956Transcription factor, NFYB/HAP3, conserved sitePROSITEPS00685NFYB_HAP3coord: 58..74

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Tan0006009Tan0006009gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0006009.1-five_prime_utrTan0006009.1-five_prime_utr-LG05:8191785..8192176five_prime_UTR
Tan0006009.1-five_prime_utrTan0006009.1-five_prime_utr-LG05:8192274..8192791five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0006009.1-exonTan0006009.1-exon-LG05:8191785..8192176exon
Tan0006009.1-exonTan0006009.1-exon-LG05:8192274..8193745exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0006009.1-cdsTan0006009.1-cds-LG05:8192792..8193409CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0006009.1-three_prime_utrTan0006009.1-three_prime_utr-LG05:8193410..8193745three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Tan0006009.1Tan0006009.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding