Tan0003273.1 (mRNA) Snake gourd v1

Overview


Name	Tan0003273.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Phytocyanin domain-containing protein
Location	LG02: 54276178 .. 54277860 (+)
Sequence length	935
RNA-Seq Expression	Tan0003273.1
Synteny	Tan0003273.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAGTTAAGTAGAATTGAAAAAATAATGGCAGTTGTAGATCCATAAGGCAACCCTCTTCATTAATCTCTATAAACAACACTCTCCCCAGCCCTGATAAGTAAAACCTCAAACCAGACCCTTCTAGACACACACTGAAATACAGAGAGCTATGGAGCTTCTAAGAAGAAGGGTCGCCGGCAGTGGGTTGCTGCAGGCGGCGGCGGCGTTGGCGGTGGTGCTGCTGGCTGCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTAGCAACATGGGATGGACGACCAATGTCAACTACACTATCTGGGCTCAGGGGAAGCACTTCTACTATGATGACTGGCTCTGTAAGCACTTGTATCTATAGATCTGTAAATGATGTTTTGAGTTATAGCTGATTTTCTGATTTCGTGGAGATTTTTAGCTCATAATTTGATTTTCCTGAGTTTTGAGGGGACATTTTGAAGGGGTTGAAGTTCTTGGTGCTGCTGACAAAATTGGTGTGTCAATTAGACAAATGAGAGTATTAATTTCAAATTGGTTCTTTCCCAAATGAAAATAACTTCAAAGGGATTCACTGTTTGGATGTTTGAATTTCTTATTTCTATGTTCGTGCATGAGAGCTGCTTTTGATTCTACTTTTACTATGCACTTTCTTCTCCCCTTGGAATTTTGGGATATGGCTAAAATTATTGTTTGTGTTCTTACGATTCTCATTATTCCCATCTCTCTCTTGCATACATTGACATATCAACACAATGTAACGAGCTCGGCTTGAAATTTGGAATCTACCTATCCTTGTAAGCCAACATGGACATGTTTTATTCTCAGTTACAAGTCTTTTAGAGATAGCAAACGAGCTAAAAAGGAAGCGGTGTACAAAAGTATTGTTTTGTTTTGTATCACTATTGTCTCATACTTTATAATCTCTCCATTTCTCATTTTGATGTAATGTGAGGATGCGTCAGACACACAGAGACGAGTATGGTGAATAAGTTGTTGAATGAAGAGAAAATAACATAAAAGTAGGAAGATGAAAATTTGTTTGTGGACAGAAGAGGCATTTAGGTAGCTAACTTGGGGTTGTGTGTGTAGTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGACTTGCAATTCTGATCATCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATATAACCAGGCCCTATTACTTCATAAGTGGAAAGGGCTTTTGTTATGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCTCCACCGCCCTCGAGTTCGCCCTTGAACCAGAAGAGTGCTTCTCCAAGATCGACCCACATTGGCCACACCCCGTTTCTTTTAACCGCTGTTTTCTCCATCGCTGCTCTTCAGCTAGCTTTCACCCACATCTGGTAAAGAACACCAGTCCTATTGATTGATATTCAAACAGTCCCCAAATTCTGAAACAAAGATCTTGTTATTAATCATCTTCTTTCTTTTGCTTTCCCTTTGATTTTAGACTTTGATATTCAAATTAAATTATTTTATTTTTTAAGCTTTTTAAATTTGGCTTTTTCTTGTGGACATGGAAATTGTATGGCTTGAATTTTGATAACACTCTAATTTATTTTGTCCATTTAAATGGGTTTTGCAAAGC

mRNA sequence

CAGAAGTTAAGTAGAATTGAAAAAATAATGGCAGTTGTAGATCCATAAGGCAACCCTCTTCATTAATCTCTATAAACAACACTCTCCCCAGCCCTGATAAGTAAAACCTCAAACCAGACCCTTCTAGACACACACTGAAATACAGAGAGCTATGGAGCTTCTAAGAAGAAGGGTCGCCGGCAGTGGGTTGCTGCAGGCGGCGGCGGCGTTGGCGGTGGTGCTGCTGGCTGCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTAGCAACATGGGATGGACGACCAATGTCAACTACACTATCTGGGCTCAGGGGAAGCACTTCTACTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGACTTGCAATTCTGATCATCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATATAACCAGGCCCTATTACTTCATAAGTGGAAAGGGCTTTTGTTATGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCTCCACCGCCCTCGAGTTCGCCCTTGAACCAGAAGAGTGCTTCTCCAAGATCGACCCACATTGGCCACACCCCGTTTCTTTTAACCGCTGTTTTCTCCATCGCTGCTCTTCAGCTAGCTTTCACCCACATCTGGTAAAGAACACCAGTCCTATTGATTGATATTCAAACAGTCCCCAAATTCTGAAACAAAGATCTTGTTATTAATCATCTTCTTTCTTTTGCTTTCCCTTTGATTTTAGACTTTGATATTCAAATTAAATTATTTTATTTTTTAAGCTTTTTAAATTTGGCTTTTTCTTGTGGACATGGAAATTGTATGGCTTGAATTTTGATAACACTCTAATTTATTTTGTCCATTTAAATGGGTTTTGCAAAGC

Coding sequence (CDS)

ATGGAGCTTCTAAGAAGAAGGGTCGCCGGCAGTGGGTTGCTGCAGGCGGCGGCGGCGTTGGCGGTGGTGCTGCTGGCTGCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTAGCAACATGGGATGGACGACCAATGTCAACTACACTATCTGGGCTCAGGGGAAGCACTTCTACTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGACTTGCAATTCTGATCATCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATATAACCAGGCCCTATTACTTCATAAGTGGAAAGGGCTTTTGTTATGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCTCCACCGCCCTCGAGTTCGCCCTTGAACCAGAAGAGTGCTTCTCCAAGATCGACCCACATTGGCCACACCCCGTTTCTTTTAACCGCTGTTTTCTCCATCGCTGCTCTTCAGCTAGCTTTCACCCACATCTGGTAA

Protein sequence

MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKGFCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW

Homology

[Close]

BLAST of Tan0003273.1 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-44
Identity = 88/169 (52.07%), Postives = 118/169 (69.82%), Query Frame = 0


Query: 13  LLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRN 72
           +L  A  LA ++ A +P V+A ++TVG N  W  N+NYTIWAQGKHFY  DWL+FV+DRN
Sbjct: 6   VLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRN 65

Query: 73  QMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKGFCYGGMKLAIHV 132
           Q N+LEVNKTDYE C +DHP+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ V
Sbjct: 66  QHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKV 125

Query: 133 EHLPPPPSSSPLNQKSASPRSTHIGHTPFLL-TAVFSIAALQLAFTHIW 181
           E LPPPP S+P+  K+    S   G   F++  ++F+  A+    + +W
Sbjct: 126 EKLPPPPKSAPV--KNIGSVSMVTGLAQFMIPVSLFAFPAMWDVISRMW 172

[Close]

BLAST of Tan0003273.1 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.9e-13
Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 18  AALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNVL 77
           AA  ++ LAAVP V A  + VG   GWT+N++YT+W  GK F   D L FVY  +  +V 
Sbjct: 6   AAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSH-SVS 65

Query: 78  EVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGK-GFCYGGMKLAIHVEHLP 137
            V+K  Y+ C+S     N+  G  +  + L      +F+    G C  GMKLA+ V    
Sbjct: 66  VVDKAGYDNCDSSGATQNFADGDTK--IDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAA 125

Query: 138 PPPS--SSPLNQKS--ASPRST 155
           P PS  SSP +  S  +SP ST
Sbjct: 126 PSPSTPSSPPSTPSTPSSPPST 144

[Close]

BLAST of Tan0003273.1 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 33  ATRWTVGSNMGWTTNV--NYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYETCNSD 92
           AT   VG + GWTT V  +Y  WA    F+  D L F Y+    NVL+V++  +++CNS 
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 93  HPLHNYTTGAGRDVVHLNITRPYYFISG-KGFCYGGMKLAIHVEHLPPPPSSS 143
            P  +YT+GA  D + L     +YF+ G  G C  G K+ I V+    P SSS
Sbjct: 61  SPAASYTSGA--DSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD----PGSSS 107

[Close]

BLAST of Tan0003273.1 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10
Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 0


Query: 20  LAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEV 79
           L  ++  A+P + AT +TVG   GW    +Y+ WA  K F   D L F Y      V EV
Sbjct: 12  LLAIINMALPSL-ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEV 71

Query: 80  NKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISG-KGFCYGGMKLAIHVE---HL 139
            ++DY++C S + +   +TGA    + L     +YFI G  G   GGMKL+I V+     
Sbjct: 72  KESDYKSCTSGNSISTDSTGA--TTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGS 131

Query: 140 PPPPSSSPLNQKSASPRS 154
              PS++P +    SP S
Sbjct: 132 SAAPSATPSSSGKGSPSS 146

[Close]

BLAST of Tan0003273.1 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10
Identity = 56/151 (37.09%), Postives = 80/151 (52.98%), Query Frame = 0


Query: 4   LRRRVAGSGLLQAAAALAVVL-LAAVPEVSATRWTVGSNMG-W----TTNVNYTIWAQGK 63
           L   +A S L  A  +L  +  LAA  EV     TVG   G W    +++ ++T WAQ  
Sbjct: 3   LSASMASSSLHVAIFSLIFLFSLAAANEV-----TVGGKSGDWKIPPSSSYSFTEWAQKA 62

Query: 64  HFYYDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFIS 123
            F   D++ F Y+  + +VLEV K  Y +CN+ +PL NYT G  +  V L+ + P+YFIS
Sbjct: 63  RFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETK--VKLDRSGPFYFIS 122

Query: 124 G-KGFCYGGMKLAIHV---EHLPPPPSSSPL 145
           G  G C  G KL++ V    H    P+ SP+
Sbjct: 123 GANGHCEKGQKLSLVVISPRHSVISPAPSPV 146

[Close]

BLAST of Tan0003273.1 vs. NCBI nr
Match: XP_008443359.1 (PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [Cucumis melo var. makuwa] >TYK25602.1 lamin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 314.3 bits (804), Expect = 6.8e-82
Identity = 148/180 (82.22%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           ME+LR RV GSGLL A AA  VVLLA+VPEVSATRWTVG NMGWTTNVNY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYE C SDHPLHN+TTGAGRDVVHLN+TRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FCYGGMKLAIHVEHLPPPPS+ P+N+KS++ RST+ GHTPF+LTAVF+IAA+  AF+ +W
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]

BLAST of Tan0003273.1 vs. NCBI nr
Match: XP_004136682.1 (lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 8.8e-82
Identity = 150/180 (83.33%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           ME+LR RV GSGLL A AA+ V+LLAAVPEVSATRWTVG NMGW TNVNYT WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAV-VILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYE C SDHPLHN+TTGAGRDVVHLN+TRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FC+GGMKLAIHVEHLPPPPSSSPLN+KS++ RST+ GHTPF+LTAVF+IAA+   FT +W
Sbjct: 121 FCFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVLEVFTRVW 179

[Close]

BLAST of Tan0003273.1 vs. NCBI nr
Match: XP_038903389.1 (lamin-like protein [Benincasa hispida])

HSP 1 Score: 307.8 bits (787), Expect = 6.3e-80
Identity = 151/180 (83.89%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           ME+L RRV G GLL A A   VVLLAAVPEVSATRWTVG NMGWTTNVNYTIWAQ KHFY
Sbjct: 1   MEVL-RRVDGGGLLVAVA--VVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQDKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYE C SDHPLHN+TTGAGRDVVHLN+TRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FCYGGMKLAIHVEHLPPPPSSSPLN+KS++ RST+I HTPF+LTAVF+I AL  AF  +W
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTYISHTPFILTAVFAITALYEAFARLW 177

[Close]

BLAST of Tan0003273.1 vs. NCBI nr
Match: XP_022935116.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 1.0e-77
Identity = 143/180 (79.44%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           M++L  RV G GLL AA   AVV+L A+PEVSATRWTVG  MGWTTNVNYTIWA+GKHFY
Sbjct: 31  MQVLTTRVGGVGLLVAA---AVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFY 90

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YE CNSD PLHN+TTGAGRDVVHLN+TRPYYFISGKG
Sbjct: 91  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKG 150

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FCYGGMKLAIHV HLPPPPS+SP N KS++ RS++IGHTPF+LTAVF+IAAL+ AF   W
Sbjct: 151 FCYGGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAIAALREAFRRFW 207

[Close]

BLAST of Tan0003273.1 vs. NCBI nr
Match: XP_023528207.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.8 bits (756), Expect = 2.5e-76
Identity = 141/180 (78.33%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           M++LR RV G  LL AAAA A V+L A+PEVSATRWTVG  MGWTTNVNYT+WA+GKHFY
Sbjct: 1   MQVLRTRVGGVWLLVAAAA-AAVMLTAMPEVSATRWTVGGKMGWTTNVNYTMWAEGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YE CNSD PLHN+TTGAGRDVVHLN+TRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FCYGGMKLAIHV HLPPPPS+SP N  S++ RS++I HTPF+LTAVF+IAAL+ AF   W
Sbjct: 121 FCYGGMKLAIHVRHLPPPPSASPFNATSSALRSSYIAHTPFVLTAVFAIAALREAFCRFW 179

[Close]

BLAST of Tan0003273.1 vs. ExPASy TrEMBL
Match: A0A5D3DPZ3 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007610 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82
Identity = 148/180 (82.22%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           ME+LR RV GSGLL A AA  VVLLA+VPEVSATRWTVG NMGWTTNVNY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYE C SDHPLHN+TTGAGRDVVHLN+TRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FCYGGMKLAIHVEHLPPPPS+ P+N+KS++ RST+ GHTPF+LTAVF+IAA+  AF+ +W
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]

BLAST of Tan0003273.1 vs. ExPASy TrEMBL
Match: A0A1S3B7D2 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82
Identity = 148/180 (82.22%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           ME+LR RV GSGLL A AA  VVLLA+VPEVSATRWTVG NMGWTTNVNY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYE C SDHPLHN+TTGAGRDVVHLN+TRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FCYGGMKLAIHVEHLPPPPS+ P+N+KS++ RST+ GHTPF+LTAVF+IAA+  AF+ +W
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]

BLAST of Tan0003273.1 vs. ExPASy TrEMBL
Match: A0A0A0LC11 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.3e-82
Identity = 150/180 (83.33%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           ME+LR RV GSGLL A AA+ V+LLAAVPEVSATRWTVG NMGW TNVNYT WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAV-VILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYE C SDHPLHN+TTGAGRDVVHLN+TRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FC+GGMKLAIHVEHLPPPPSSSPLN+KS++ RST+ GHTPF+LTAVF+IAA+   FT +W
Sbjct: 121 FCFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVLEVFTRVW 179

[Close]

BLAST of Tan0003273.1 vs. ExPASy TrEMBL
Match: A0A6J1F3N0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.9e-78
Identity = 143/180 (79.44%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           M++L  RV G GLL AA   AVV+L A+PEVSATRWTVG  MGWTTNVNYTIWA+GKHFY
Sbjct: 31  MQVLTTRVGGVGLLVAA---AVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFY 90

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YE CNSD PLHN+TTGAGRDVVHLN+TRPYYFISGKG
Sbjct: 91  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKG 150

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FCYGGMKLAIHV HLPPPPS+SP N KS++ RS++IGHTPF+LTAVF+IAAL+ AF   W
Sbjct: 151 FCYGGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAIAALREAFRRFW 207

[Close]

BLAST of Tan0003273.1 vs. ExPASy TrEMBL
Match: A0A6J1J8R9 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482361 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.8e-76
Identity = 141/180 (78.33%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 1   MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFY 60
           M++LR RV G GLL AA   AVV+L A+ EVSATRWTVG  MGWTTNVNYTIWA+GKHFY
Sbjct: 1   MQVLRTRVGGVGLLVAA---AVVVLTAMSEVSATRWTVGGKMGWTTNVNYTIWAEGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YE CNSD PLHN+TTGAGRDVVHLN+T PYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTGPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW 180
           FCYGGMKLAIHV HLPPPPS+SP N KS++ RS++I HTPF+LTAVF+IAAL+ AF   W
Sbjct: 121 FCYGGMKLAIHVWHLPPPPSASPFNAKSSALRSSYIAHTPFVLTAVFAIAALREAFRRFW 177

[Close]

BLAST of Tan0003273.1 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 181.0 bits (458), Expect = 8.3e-46
Identity = 88/169 (52.07%), Postives = 118/169 (69.82%), Query Frame = 0


Query: 13  LLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRN 72
           +L  A  LA ++ A +P V+A ++TVG N  W  N+NYTIWAQGKHFY  DWL+FV+DRN
Sbjct: 6   VLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRN 65

Query: 73  QMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKGFCYGGMKLAIHV 132
           Q N+LEVNKTDYE C +DHP+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ V
Sbjct: 66  QHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKV 125

Query: 133 EHLPPPPSSSPLNQKSASPRSTHIGHTPFLL-TAVFSIAALQLAFTHIW 181
           E LPPPP S+P+  K+    S   G   F++  ++F+  A+    + +W
Sbjct: 126 EKLPPPPKSAPV--KNIGSVSMVTGLAQFMIPVSLFAFPAMWDVISRMW 172

[Close]

BLAST of Tan0003273.1 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 171.0 bits (432), Expect = 8.6e-43
Identity = 85/143 (59.44%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 8   VAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFYYDDWLFF 67
           +A   +L A A LA +L  A   V+A RWTVG N  W  N+NYTIWAQ KHFY DDWL+F
Sbjct: 1   MARVAVLVAGAVLAFLL--AATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYF 60

Query: 68  VYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGK-GFCYGGM 127
           VY+RNQ NV+EVN+T+Y +CN ++P+ N++ GAGRD+VHLN+TR YY ISG  G CYGGM
Sbjct: 61  VYERNQYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGM 120

Query: 128 KLAIHVEHLPPPPSSSPLNQKSA 150
           KLA+ VE  PPPP+++P N+ SA
Sbjct: 121 KLAVLVEKPPPPPAAAP-NKNSA 140

[Close]

BLAST of Tan0003273.1 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-37
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 11  SGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFYYDDWLFFVYD 70
           S +L +A  LA ++ A +PEV+A ++ VG    W  N+NYT+WAQGKHFY  DWL+FV+ 
Sbjct: 4   SMVLISAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFY 63

Query: 71  RNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKGFCYGGMKLAI 130
           R+Q N+LEVNK DYE C S+ P+ NYT GAGRD+V L  TR YY + G+G C  GMKL +
Sbjct: 64  RDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDV 123

Query: 131 HVEHLPPPPSSSP 144
            VE  PPPP  +P
Sbjct: 124 LVETPPPPPPFTP 136

[Close]

BLAST of Tan0003273.1 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-23
Identity = 66/164 (40.24%), Postives = 92/164 (56.10%), Query Frame = 0


Query: 14  LQAAAALAVVLLAAVPEVSATRWTV-GSNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRN 73
           L A   + V++L  V EV ++   V G    W ++VN++ WA  + FY  DWL+F ++R 
Sbjct: 6   LWALVYVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRT 65

Query: 74  QMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKGFCYGGMKLAIHV 133
           + N+L+VNK+ YE C  +  + N T G GRDV  L   +PYYFI G+G+C  GMKLAI V
Sbjct: 66  RHNILQVNKSSYEQCVDNDYIFNITRG-GRDVFQLLEPKPYYFICGRGYCLKGMKLAITV 125

Query: 134 EHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAF 177
             LP PP S+P N  S +        TP +     + A L  AF
Sbjct: 126 --LPQPPPSAPTNFTSTT--------TPLIPPNAITAAILIFAF 158

[Close]

BLAST of Tan0003273.1 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 )

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-20
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 59  FYYDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISG 118
           F+++  L FV+ R+Q N+LEVNK DYE C S+ P+ NYT GAGRD+V L  TR YY + G
Sbjct: 14  FFFNFSLNFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDG 73

Query: 119 KGFCYGGMKLAIHVEHLPPPPSSSP 144
           +G C  GMKL + VE  PPPP  +P
Sbjct: 74  RGGCVQGMKLDVLVETPPPPPPFTP 98

The following BLAST results are available for this feature:

BLAST of Tan0003273.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	1.2e-44	52.07	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q96316	6.9e-13	38.73	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]
P80728	1.4e-10	38.94	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]
Q41001	2.5e-10	34.78	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9SK27	2.5e-10	37.09	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]

BLAST of Tan0003273.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443359.1	6.8e-82	82.22	PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [C...	[more]
XP_004136682.1	8.8e-82	83.33	lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319...	[more]
XP_038903389.1	6.3e-80	83.89	lamin-like protein [Benincasa hispida]	[more]
XP_022935116.1	1.0e-77	79.44	lamin-like protein [Cucurbita moschata]	[more]
XP_023528207.1	2.5e-76	78.33	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0003273.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPZ3	3.3e-82	82.22	Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B7D2	3.3e-82	82.22	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1	[more]
A0A0A0LC11	4.3e-82	83.33	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220...	[more]
A0A6J1F3N0	4.9e-78	79.44	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1	[more]
A0A6J1J8R9	7.8e-76	78.33	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482361 PE=4 SV=1	[more]

BLAST of Tan0003273.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15350.1	8.3e-46	52.07	early nodulin-like protein 17	[more]
AT3G01070.1	8.6e-43	59.44	early nodulin-like protein 16	[more]
AT4G12880.1	4.1e-37	54.14	early nodulin-like protein 19	[more]
AT2G27035.1	3.4e-23	40.24	early nodulin-like protein 20	[more]
AT4G12880.2	2.7e-20	54.12	early nodulin-like protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 32..135 e-value: 5.8E-29 score: 102.4
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 33..132
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 44..126 e-value: 9.7E-21 score: 73.6
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 34..134 score: 33.024277
None	No IPR available	PANTHER	PTHR33021:SF231	LAMIN-LIKE PROTEIN	coord: 15..172
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 15..172

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0003273	Tan0003273	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0003273.1-five_prime_utr	Tan0003273.1-five_prime_utr-LG02:54276178..54276328	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0003273.1-exon	Tan0003273.1-exon-LG02:54276178..54276524	exon
Tan0003273.1-exon	Tan0003273.1-exon-LG02:54277273..54277860	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0003273.1-cds	Tan0003273.1-cds-LG02:54276329..54276524	CDS
Tan0003273.1-cds	Tan0003273.1-cds-LG02:54277273..54277619	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0003273.1-three_prime_utr	Tan0003273.1-three_prime_utr-LG02:54277620..54277860	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0003273.1	Tan0003273.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity