Tan0003273 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGAAGTTAAGTAGAATTGAAAAAATAATGGCAGTTGTAGATCCATAAGGCAACCCTCTTCATTAATCTCTATAAACAACACTCTCCCCAGCCCTGATAAGTAAAACCTCAAACCAGACCCTTCTAGACACACACTGAAATACAGAGAGCTATGGAGCTTCTAAGAAGAAGGGTCGCCGGCAGTGGGTTGCTGCAGGCGGCGGCGGCGTTGGCGGTGGTGCTGCTGGCTGCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTAGCAACATGGGATGGACGACCAATGTCAACTACACTATCTGGGCTCAGGGGAAGCACTTCTACTATGATGACTGGCTCTGTAAGCACTTGTATCTATAGATCTGTAAATGATGTTTTGAGTTATAGCTGATTTTCTGATTTCGTGGAGATTTTTAGCTCATAATTTGATTTTCCTGAGTTTTGAGGGGACATTTTGAAGGGGTTGAAGTTCTTGGTGCTGCTGACAAAATTGGTGTGTCAATTAGACAAATGAGAGTATTAATTTCAAATTGGTTCTTTCCCAAATGAAAATAACTTCAAAGGGATTCACTGTTTGGATGTTTGAATTTCTTATTTCTATGTTCGTGCATGAGAGCTGCTTTTGATTCTACTTTTACTATGCACTTTCTTCTCCCCTTGGAATTTTGGGATATGGCTAAAATTATTGTTTGTGTTCTTACGATTCTCATTATTCCCATCTCTCTCTTGCATACATTGACATATCAACACAATGTAACGAGCTCGGCTTGAAATTTGGAATCTACCTATCCTTGTAAGCCAACATGGACATGTTTTATTCTCAGTTACAAGTCTTTTAGAGATAGCAAACGAGCTAAAAAGGAAGCGGTGTACAAAAGTATTGTTTTGTTTTGTATCACTATTGTCTCATACTTTATAATCTCTCCATTTCTCATTTTGATGTAATGTGAGGATGCGTCAGACACACAGAGACGAGTATGGTGAATAAGTTGTTGAATGAAGAGAAAATAACATAAAAGTAGGAAGATGAAAATTTGTTTGTGGACAGAAGAGGCATTTAGGTAGCTAACTTGGGGTTGTGTGTGTAGTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGACTTGCAATTCTGATCATCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATATAACCAGGCCCTATTACTTCATAAGTGGAAAGGGCTTTTGTTATGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCTCCACCGCCCTCGAGTTCGCCCTTGAACCAGAAGAGTGCTTCTCCAAGATCGACCCACATTGGCCACACCCCGTTTCTTTTAACCGCTGTTTTCTCCATCGCTGCTCTTCAGCTAGCTTTCACCCACATCTGGTAAAGAACACCAGTCCTATTGATTGATATTCAAACAGTCCCCAAATTCTGAAACAAAGATCTTGTTATTAATCATCTTCTTTCTTTTGCTTTCCCTTTGATTTTAGACTTTGATATTCAAATTAAATTATTTTATTTTTTAAGCTTTTTAAATTTGGCTTTTTCTTGTGGACATGGAAATTGTATGGCTTGAATTTTGATAACACTCTAATTTATTTTGTCCATTTAAATGGGTTTTGCAAAGC CAGAAGTTAAGTAGAATTGAAAAAATAATGGCAGTTGTAGATCCATAAGGCAACCCTCTTCATTAATCTCTATAAACAACACTCTCCCCAGCCCTGATAAGTAAAACCTCAAACCAGACCCTTCTAGACACACACTGAAATACAGAGAGCTATGGAGCTTCTAAGAAGAAGGGTCGCCGGCAGTGGGTTGCTGCAGGCGGCGGCGGCGTTGGCGGTGGTGCTGCTGGCTGCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTAGCAACATGGGATGGACGACCAATGTCAACTACACTATCTGGGCTCAGGGGAAGCACTTCTACTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGACTTGCAATTCTGATCATCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATATAACCAGGCCCTATTACTTCATAAGTGGAAAGGGCTTTTGTTATGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCTCCACCGCCCTCGAGTTCGCCCTTGAACCAGAAGAGTGCTTCTCCAAGATCGACCCACATTGGCCACACCCCGTTTCTTTTAACCGCTGTTTTCTCCATCGCTGCTCTTCAGCTAGCTTTCACCCACATCTGGTAAAGAACACCAGTCCTATTGATTGATATTCAAACAGTCCCCAAATTCTGAAACAAAGATCTTGTTATTAATCATCTTCTTTCTTTTGCTTTCCCTTTGATTTTAGACTTTGATATTCAAATTAAATTATTTTATTTTTTAAGCTTTTTAAATTTGGCTTTTTCTTGTGGACATGGAAATTGTATGGCTTGAATTTTGATAACACTCTAATTTATTTTGTCCATTTAAATGGGTTTTGCAAAGC ATGGAGCTTCTAAGAAGAAGGGTCGCCGGCAGTGGGTTGCTGCAGGCGGCGGCGGCGTTGGCGGTGGTGCTGCTGGCTGCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTAGCAACATGGGATGGACGACCAATGTCAACTACACTATCTGGGCTCAGGGGAAGCACTTCTACTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGACTTGCAATTCTGATCATCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATATAACCAGGCCCTATTACTTCATAAGTGGAAAGGGCTTTTGTTATGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCTCCACCGCCCTCGAGTTCGCCCTTGAACCAGAAGAGTGCTTCTCCAAGATCGACCCACATTGGCCACACCCCGTTTCTTTTAACCGCTGTTTTCTCCATCGCTGCTCTTCAGCTAGCTTTCACCCACATCTGGTAA MELLRRRVAGSGLLQAAAALAVVLLAAVPEVSATRWTVGSNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNYTTGAGRDVVHLNITRPYYFISGKGFCYGGMKLAIHVEHLPPPPSSSPLNQKSASPRSTHIGHTPFLLTAVFSIAALQLAFTHIW Homology
BLAST of Tan0003273 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.2e-44 Identity = 88/169 (52.07%), Postives = 118/169 (69.82%), Query Frame = 0
BLAST of Tan0003273 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 6.9e-13 Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 0
BLAST of Tan0003273 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10 Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 0
BLAST of Tan0003273 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10 Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 0
BLAST of Tan0003273 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10 Identity = 56/151 (37.09%), Postives = 80/151 (52.98%), Query Frame = 0
BLAST of Tan0003273 vs. NCBI nr
Match: XP_008443359.1 (PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [Cucumis melo var. makuwa] >TYK25602.1 lamin-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 314.3 bits (804), Expect = 6.8e-82 Identity = 148/180 (82.22%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of Tan0003273 vs. NCBI nr
Match: XP_004136682.1 (lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319 [Cucumis sativus]) HSP 1 Score: 313.9 bits (803), Expect = 8.8e-82 Identity = 150/180 (83.33%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of Tan0003273 vs. NCBI nr
Match: XP_038903389.1 (lamin-like protein [Benincasa hispida]) HSP 1 Score: 307.8 bits (787), Expect = 6.3e-80 Identity = 151/180 (83.89%), Postives = 161/180 (89.44%), Query Frame = 0
BLAST of Tan0003273 vs. NCBI nr
Match: XP_022935116.1 (lamin-like protein [Cucurbita moschata]) HSP 1 Score: 300.4 bits (768), Expect = 1.0e-77 Identity = 143/180 (79.44%), Postives = 159/180 (88.33%), Query Frame = 0
BLAST of Tan0003273 vs. NCBI nr
Match: XP_023528207.1 (lamin-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 295.8 bits (756), Expect = 2.5e-76 Identity = 141/180 (78.33%), Postives = 158/180 (87.78%), Query Frame = 0
BLAST of Tan0003273 vs. ExPASy TrEMBL
Match: A0A5D3DPZ3 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007610 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82 Identity = 148/180 (82.22%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of Tan0003273 vs. ExPASy TrEMBL
Match: A0A1S3B7D2 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82 Identity = 148/180 (82.22%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of Tan0003273 vs. ExPASy TrEMBL
Match: A0A0A0LC11 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 4.3e-82 Identity = 150/180 (83.33%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of Tan0003273 vs. ExPASy TrEMBL
Match: A0A6J1F3N0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 4.9e-78 Identity = 143/180 (79.44%), Postives = 159/180 (88.33%), Query Frame = 0
BLAST of Tan0003273 vs. ExPASy TrEMBL
Match: A0A6J1J8R9 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482361 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 7.8e-76 Identity = 141/180 (78.33%), Postives = 157/180 (87.22%), Query Frame = 0
BLAST of Tan0003273 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 ) HSP 1 Score: 181.0 bits (458), Expect = 8.3e-46 Identity = 88/169 (52.07%), Postives = 118/169 (69.82%), Query Frame = 0
BLAST of Tan0003273 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 ) HSP 1 Score: 171.0 bits (432), Expect = 8.6e-43 Identity = 85/143 (59.44%), Postives = 108/143 (75.52%), Query Frame = 0
BLAST of Tan0003273 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 ) HSP 1 Score: 152.1 bits (383), Expect = 4.1e-37 Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 0
BLAST of Tan0003273 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 ) HSP 1 Score: 105.9 bits (263), Expect = 3.4e-23 Identity = 66/164 (40.24%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of Tan0003273 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 ) HSP 1 Score: 96.3 bits (238), Expect = 2.7e-20 Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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