Tan0001917.2 (mRNA) Snake gourd v1

Overview


Name	Tan0001917.2
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Mitochondrial glycoprotein
Location	LG11: 8087692 .. 8089975 (-)
Sequence length	2170
RNA-Seq Expression	Tan0001917.2
Synteny	Tan0001917.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCTCTCAACACAACAATTTACAACAATCGGAAGAAATGCTGAAGAAAGTGTTGGCCGTCACTGCGGTGGCTCTGCGTAGTGGCCGCCGGCCGTCTCTGATGACCACTTGCCGTCATTCCTCCTCCGTGTCCTCCGCCGTCAACTCTTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGGTATGATTTTTACCGCTATTGTTCTCTGTTTTCAATCGCTAAACCCTAGAATTAGGGTTTTAAGCTAGACGAATATCGTTTGTTCATCTTACTTACTACTTGTTTTTATCGCAGAAAGTGAGCCCTCCCTCTCCTTTTTCTATCATTCAAGGGGCACTAGATGGCAATGGACCGGTGCTTACAAGGAACTATGGGAAGGAAGAGGTTAACATTTCAGTTATGCGATTGGCCAACATCGTTCCGGGAGGCGGTGGAGATGACGGAGACGATGAAATTAACCAGTTGTTCCTTCACGTTGCTGTATCGAAGCCGGAGCAGAAGGATAATTTACATTTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAAGCCGAACCCTCGGGGTTCCTCGTTGTTCCATCGGGTTATAATGGTCCCGTGTTCGAGTAAGTTTAATGTCTTTTATATGGAGAGTTTTAGAACAGTTATATTTAATTTCCATGGCTTCTTTGGCTGTGCTACTACTACTTAGGATACTATTTTGAAGGAAGTTAGCATCTATTTTCTTGGAGTTTGCTTGAATGTTTTAGGCGGTAGTAGACATACTAGGCAAGTAGATTGAGCATAGTTGTCTATGGCTTCAATTTGTGGAAATGCGAGTAATTTTGATTTTGTGTCTAAATTTTTAATGTCATCAGCTAAACTAACAACAAATCAGCCATTTTTATCTTGATCGAGTGATCAAAGGAGGAGTAAGAAGGTATGCATTAAGATCTAATATTGAAGGTCATGAGTCAGGTTTGTTGCTGCCTACAATATGCTGTCAAATAACTTTTAACTTAAACTGAACAACCCAACCCAACCCAACCCATTTGGTTATGAATTATTTTGGGGGGTTGGAAATTTCAGTTAATTTTTCTCTATCATTTGAGTCTGCTCTTTTAATTCTTCATTTGCAACTATTGATTTTATTCCTGCACTTGCAGCCACTGATTTCTCTTCTTTGGTTACAAACCCAGTTTTCGTTTTTTCACTCTCATTACTGATTTAGTTTGTTCACTCGCAGCCACTGATATCATGTTATTAATCCACTCACTTGTCTAAGTACCCTAGCATTATAGATTAGTGCAAATTTGCAGATTTTCATAAGTTAGTTAGTACCCTTTGGTTGTAATTCTTTTGGCGGTTCTCAGGGTTGTTTTGGCTAGTGTTCTGGAATGGCTCAGTTCTACTATTCTTTTATTTTATCTTATGAAAGCCATCTCTTCTTAAATAATTGTATTTGGAGATCCCTGTCAACGAATTGTAGTAGGAACATGCTGTTGTCCAGTGAGATAAGTTGAGTAGCATGAGAGATGGCTCAAATACTCATCGATATCAAAAAAAAGGAAAAAAACTGTATTTGGAGATATTTGTTCATCATAAAATTGGCAAAGATATGTTGTCATAGGGTCCTGATGTTAGTGCTTCTGTGCATAACATATATTCCAGTTTCTATGAACCAAGTGGGATTGTGACGTTTTCTGCCTTCAGGATCTCCAATGCTGACAATCTTTACCAAATTACTGTTGATGGCAAAACATGTCATATGAAAACCTACACCTTTTTTTCTCTGGATGGCAGGGATCTAGATGAGAAGATGCGAGACGTGTTTCACAATTATATAGACGAGCGAGGTGTAAATGAGTCTCTCTTTCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAACTCTTATGCGGTGGTTCAGATCGGTTGGCTCTTTCATCAACGAGCACAAGAACACTAAAGAGAATTAATAGTAAATGAGAATTGGATAGGAAAAATGTCAGCCCAGATGCTAGATTTCATGCAGTTCAGGGTTCAGTCCTCCTATCAGTTAGGTGTATCAGGTAAATGATCAAGTTCATTCTATTATACAATTTTGTATAAGCCCTCTTGTGATGATTTGTTTTTCCTTGTTAAGCCATGGTTTTTCTTTTCCAAACATGATTAACATTGAATTCAATCAATCAATTACTATATATTGCAGCTTCATTGTTGTGGACCCTGTTTTGTTTTTTTCCTG

mRNA sequence

ACTCTCTCAACACAACAATTTACAACAATCGGAAGAAATGCTGAAGAAAGTGTTGGCCGTCACTGCGGTGGCTCTGCGTAGTGGCCGCCGGCCGTCTCTGATGACCACTTGCCGTCATTCCTCCTCCGTGTCCTCCGCCGTCAACTCTTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGAAAGTGAGCCCTCCCTCTCCTTTTTCTATCATTCAAGGGGCACTAGATGGCAATGGACCGGTGCTTACAAGGAACTATGGGAAGGAAGAGGTTAACATTTCAGTTATGCGATTGGCCAACATCGTTCCGGGAGGCGGTGGAGATGACGGAGACGATGAAATTAACCAGTTGTTCCTTCACGTTGCTGTATCGAAGCCGGAGCAGAAGGATAATTTACATTTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAAGCCGAACCCTCGGGGTTCCTCGTTGTTCCATCGGGTTATAATGGTCCCGTGTTCGAGTAAGTTTAATGTCTTTTATATGGAGAGTTTTAGAACAGTTATATTTAATTTCCATGGCTTCTTTGGCTGTGCTACTACTACTTAGGATACTATTTTGAAGGAAGTTAGCATCTATTTTCTTGGAGTTTGCTTGAATGTTTTAGGCGGTAGTAGACATACTAGGCAAGTAGATTGAGCATAGTTGTCTATGGCTTCAATTTGTGGAAATGCGAGTAATTTTGATTTTGTGTCTAAATTTTTAATGTCATCAGCTAAACTAACAACAAATCAGCCATTTTTATCTTGATCGAGTGATCAAAGGAGGAGTAAGAAGGTATGCATTAAGATCTAATATTGAAGGTCATGAGTCAGGTTTGTTGCTGCCTACAATATGCTGTCAAATAACTTTTAACTTAAACTGAACAACCCAACCCAACCCAACCCATTTGGTTATGAATTATTTTGGGGGGTTGGAAATTTCAGTTAATTTTTCTCTATCATTTGAGTCTGCTCTTTTAATTCTTCATTTGCAACTATTGATTTTATTCCTGCACTTGCAGCCACTGATTTCTCTTCTTTGGTTACAAACCCAGTTTTCGTTTTTTCACTCTCATTACTGATTTAGTTTGTTCACTCGCAGCCACTGATATCATGTTATTAATCCACTCACTTGTCTAAGTACCCTAGCATTATAGATTAGTGCAAATTTGCAGATTTTCATAAGTTAGTTAGTACCCTTTGGTTGTAATTCTTTTGGCGGTTCTCAGGGTTGTTTTGGCTAGTGTTCTGGAATGGCTCAGTTCTACTATTCTTTTATTTTATCTTATGAAAGCCATCTCTTCTTAAATAATTGTATTTGGAGATCCCTGTCAACGAATTGTAGTAGGAACATGCTGTTGTCCAGTGAGATAAGTTGAGTAGCATGAGAGATGGCTCAAATACTCATCGATATCAAAAAAAAGGAAAAAAACTGTATTTGGAGATATTTGTTCATCATAAAATTGGCAAAGATATGTTGTCATAGGGTCCTGATGTTAGTGCTTCTGTGCATAACATATATTCCAGTTTCTATGAACCAAGTGGGATTGTGACGTTTTCTGCCTTCAGGATCTCCAATGCTGACAATCTTTACCAAATTACTGTTGATGGCAAAACATGTCATATGAAAACCTACACCTTTTTTTCTCTGGATGGCAGGGATCTAGATGAGAAGATGCGAGACGTGTTTCACAATTATATAGACGAGCGAGGTGTAAATGAGTCTCTCTTTCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAACTCTTATGCGGTGGTTCAGATCGGTTGGCTCTTTCATCAACGAGCACAAGAACACTAAAGAGAATTAATAGTAAATGAGAATTGGATAGGAAAAATGTCAGCCCAGATGCTAGATTTCATGCAGTTCAGGGTTCAGTCCTCCTATCAGTTAGGTGTATCAGGTAAATGATCAAGTTCATTCTATTATACAATTTTGTATAAGCCCTCTTGTGATGATTTGTTTTTCCTTGTTAAGCCATGGTTTTTCTTTTCCAAACATGATTAACATTGAATTCAATCAATCAATTACTATATATTGCAGCTTCATTGTTGTGGACCCTGTTTTGTTTTTTTCCTG

Coding sequence (CDS)

ATGCTGAAGAAAGTGTTGGCCGTCACTGCGGTGGCTCTGCGTAGTGGCCGCCGGCCGTCTCTGATGACCACTTGCCGTCATTCCTCCTCCGTGTCCTCCGCCGTCAACTCTTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGAAAGTGAGCCCTCCCTCTCCTTTTTCTATCATTCAAGGGGCACTAGATGGCAATGGACCGGTGCTTACAAGGAACTATGGGAAGGAAGAGGTTAACATTTCAGTTATGCGATTGGCCAACATCGTTCCGGGAGGCGGTGGAGATGACGGAGACGATGAAATTAACCAGTTGTTCCTTCACGTTGCTGTATCGAAGCCGGAGCAGAAGGATAATTTACATTTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAAGCCGAACCCTCGGGGTTCCTCGTTGTTCCATCGGGTTATAATGGTCCCGTGTTCGAGTAA

Protein sequence

MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVSPPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAVSKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFE

Homology

[Close]

BLAST of Tan0001917.2 vs. NCBI nr
Match: XP_038884404.1 (uncharacterized protein At2g39795, mitochondrial [Benincasa hispida])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK +A TAVALRS RRPSLM TCRHS+SV+SAVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKAMAATAVALRS-RRPSLMVTCRHSTSVTSAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSIIQGALDGNGPVLTRNYGKEEV ISVMRLANIVPGGGGDDGDDEINQLFLHV V
Sbjct: 61  PPSSFSIIQGALDGNGPVLTRNYGKEEVKISVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFE 170
           SK EQKD+LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFE
Sbjct: 121 SKLEQKDDLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE 168

[Close]

BLAST of Tan0001917.2 vs. NCBI nr
Match: XP_022992760.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR   RPSLM TCRHS++VS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLHV V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFE 170
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFE
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE 169

[Close]

BLAST of Tan0001917.2 vs. NCBI nr
Match: XP_022938797.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG6578831.1 putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016357.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR   RPSLM TCRHS+SVS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLH+ V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFE 170
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFE
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE 169

[Close]

BLAST of Tan0001917.2 vs. NCBI nr
Match: XP_023549717.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.4 bits (781), Expect = 3.0e-79
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR  RRPSLM TCR S+SVS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLH+ V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFE 170
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFE
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE 169

[Close]

BLAST of Tan0001917.2 vs. NCBI nr
Match: XP_022134253.1 (uncharacterized protein At2g39795, mitochondrial [Momordica charantia])

HSP 1 Score: 302.8 bits (774), Expect = 1.9e-78
Identity = 152/171 (88.89%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTC-RHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M+KK++AV A AL+S RRPSLMTTC RHS+SVSSAVNSLLLRSLKEHYLEISRMTPPPKV
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  SPPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGG-DDGDDEINQLFLHV 120
           SPPSPFSII+GALD NGPVLTRN+G+EEVNISVMRLANIVPGGGG DDGD+EINQLFLHV
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDEEINQLFLHV 120

Query: 121 AVSKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFE 170
            VSKPEQ+DNLHFLCGLYPDALGIHSVSMRP+AE SGFLVVPSGYNGPVFE
Sbjct: 121 TVSKPEQRDNLHFLCGLYPDALGIHSVSMRPRAESSGFLVVPSGYNGPVFE 171

[Close]

BLAST of Tan0001917.2 vs. ExPASy TrEMBL
Match: A0A6J1JWM0 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111489000 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.4e-80
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR   RPSLM TCRHS++VS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLHV V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFE 170
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFE
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE 169

[Close]

BLAST of Tan0001917.2 vs. ExPASy TrEMBL
Match: A0A6J1FF36 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444904 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.4e-80
Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR   RPSLM TCRHS+SVS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLH+ V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFE 170
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFE
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFE 169

[Close]

BLAST of Tan0001917.2 vs. ExPASy TrEMBL
Match: A0A6J1C1F6 (uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006555 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.3e-79
Identity = 152/171 (88.89%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTC-RHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M+KK++AV A AL+S RRPSLMTTC RHS+SVSSAVNSLLLRSLKEHYLEISRMTPPPKV
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  SPPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGG-DDGDDEINQLFLHV 120
           SPPSPFSII+GALD NGPVLTRN+G+EEVNISVMRLANIVPGGGG DDGD+EINQLFLHV
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDEEINQLFLHV 120

Query: 121 AVSKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFE 170
            VSKPEQ+DNLHFLCGLYPDALGIHSVSMRP+AE SGFLVVPSGYNGPVFE
Sbjct: 121 TVSKPEQRDNLHFLCGLYPDALGIHSVSMRPRAESSGFLVVPSGYNGPVFE 171

[Close]

BLAST of Tan0001917.2 vs. ExPASy TrEMBL
Match: A0A0A0KCG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.0e-74
Identity = 145/171 (84.80%), Postives = 152/171 (88.89%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK++A +AVALRSG RPSLM TCRHS+S SSAVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII GALDGNGPVLT+NYGKEE+NISVMRLANIV GGGG D DDEINQLFLHV V
Sbjct: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRGGGGGDDDDEINQLFLHVTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEP--SGFLVVPSGYNGPVFE 170
           SK EQKDNLHFLCGLYPDALGIHSVSMRPKAE   SGFLVVPS YNGP FE
Sbjct: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFE 171

[Close]

BLAST of Tan0001917.2 vs. ExPASy TrEMBL
Match: A0A5A7SQG8 (Mitochondrial acidic protein MAM33 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001160 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.9e-73
Identity = 141/171 (82.46%), Postives = 152/171 (88.89%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML K++A TAVALRSG RPSLM TCRHS+S SSAVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLNKLMAATAVALRSGSRPSLMVTCRHSTSASSAVNSFLLRSLKEHYLEITRMPAPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII GALDG+GPVLT+NYGKEEVNISVMRL+NIV GGGGD+ DD+INQLFLHV+V
Sbjct: 61  PPSSFSIITGALDGHGPVLTKNYGKEEVNISVMRLSNIVRGGGGDNDDDDINQLFLHVSV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEP--SGFLVVPSGYNGPVFE 170
           SKPEQKD LHFLCGLYPDALGIHSVSMRPK E   SGFL+VPS YNGP FE
Sbjct: 121 SKPEQKDTLHFLCGLYPDALGIHSVSMRPKGESSGSGFLLVPSSYNGPTFE 171

[Close]

BLAST of Tan0001917.2 vs. TAIR 10
Match: AT4G32605.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 188.7 bits (478), Expect = 3.8e-48
Identity = 94/143 (65.73%), Postives = 115/143 (80.42%), Query Frame = 0


Query: 28  SSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVSPPSPFSIIQGALDGN-GPVLTRNYGKE 87
           S++VS+AV+S+LLRSLKEHYLE+S+MTPPPKVSPPSPF I++G+L+G+ G VL ++ G E
Sbjct: 29  SANVSAAVDSMLLRSLKEHYLEVSKMTPPPKVSPPSPFEIVKGSLEGSTGAVLKKSVGNE 88

Query: 88  EVNISVMRLANIVPGGGGDDGDDEINQLFLHVAVSKPEQKDNLHFLCGLYPDALGIHSVS 147
           E+N+ VMRLA+    GG ++ D  INQLFLHVAVSKP Q D+LHFLCGLYPDALGIHSVS
Sbjct: 89  EINLFVMRLAH----GGDEEDDGGINQLFLHVAVSKPNQPDSLHFLCGLYPDALGIHSVS 148

Query: 148 MRPKAEPSGFLVVPSGYNGPVFE 170
           MRPK E       P+ Y GP FE
Sbjct: 149 MRPKLEALEMSDDPTQYTGPSFE 167

The following BLAST results are available for this feature:

BLAST of Tan0001917.2 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0001917.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884404.1	2.7e-80	92.31	uncharacterized protein At2g39795, mitochondrial [Benincasa hispida]	[more]
XP_022992760.1	1.3e-79	88.17	uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima]	[more]
XP_022938797.1	1.3e-79	88.17	uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG657883...	[more]
XP_023549717.1	3.0e-79	88.17	uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022134253.1	1.9e-78	88.89	uncharacterized protein At2g39795, mitochondrial [Momordica charantia]	[more]

BLAST of Tan0001917.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWM0	6.4e-80	88.17	uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1FF36	6.4e-80	88.17	uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1C1F6	9.3e-79	88.89	uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 ...	[more]
A0A0A0KCG3	9.0e-74	84.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1	[more]
A0A5A7SQG8	9.9e-73	82.46	Mitochondrial acidic protein MAM33 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Tan0001917.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32605.1	3.8e-48	65.73	Mitochondrial glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036561	Mitochondrial glycoprotein superfamily	GENE3D	3.10.280.10	Mitochondrial glycoprotein	coord: 36..169 e-value: 1.0E-8 score: 37.3
IPR036561	Mitochondrial glycoprotein superfamily	SUPERFAMILY	54529	Mitochondrial glycoprotein MAM33-like	coord: 41..168
None	No IPR available	PANTHER	PTHR31365	EXPRESSED PROTEIN	coord: 1..169
None	No IPR available	PANTHER	PTHR31365:SF2	MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN-LIKE	coord: 1..169

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0001917	Tan0001917	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0001917.2-three_prime_utr	Tan0001917.2-three_prime_utr-LG11:8087692..8089314	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0001917.2-exon	Tan0001917.2-exon-LG11:8087692..8089653	exon
Tan0001917.2-exon	Tan0001917.2-exon-LG11:8089768..8089975	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0001917.2-cds	Tan0001917.2-cds-LG11:8089315..8089653	CDS
Tan0001917.2-cds	Tan0001917.2-cds-LG11:8089768..8089938	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0001917.2-five_prime_utr	Tan0001917.2-five_prime_utr-LG11:8089939..8089975	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0001917.2	Tan0001917.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005759	mitochondrial matrix