Tan0001917 (gene) Snake gourd v1

Overview


Name	Tan0001917
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Mitochondrial glycoprotein
Location	LG11: 8087692 .. 8089975 (-)
RNA-Seq Expression	Tan0001917
Synteny	Tan0001917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCTCTCAACACAACAATTTACAACAATCGGAAGAAATGCTGAAGAAAGTGTTGGCCGTCACTGCGGTGGCTCTGCGTAGTGGCCGCCGGCCGTCTCTGATGACCACTTGCCGTCATTCCTCCTCCGTGTCCTCCGCCGTCAACTCTTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGGTATGATTTTTACCGCTATTGTTCTCTGTTTTCAATCGCTAAACCCTAGAATTAGGGTTTTAAGCTAGACGAATATCGTTTGTTCATCTTACTTACTACTTGTTTTTATCGCAGAAAGTGAGCCCTCCCTCTCCTTTTTCTATCATTCAAGGGGCACTAGATGGCAATGGACCGGTGCTTACAAGGAACTATGGGAAGGAAGAGGTTAACATTTCAGTTATGCGATTGGCCAACATCGTTCCGGGAGGCGGTGGAGATGACGGAGACGATGAAATTAACCAGTTGTTCCTTCACGTTGCTGTATCGAAGCCGGAGCAGAAGGATAATTTACATTTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAAGCCGAACCCTCGGGGTTCCTCGTTGTTCCATCGGGTTATAATGGTCCCGTGTTCGAGTAAGTTTAATGTCTTTTATATGGAGAGTTTTAGAACAGTTATATTTAATTTCCATGGCTTCTTTGGCTGTGCTACTACTACTTAGGATACTATTTTGAAGGAAGTTAGCATCTATTTTCTTGGAGTTTGCTTGAATGTTTTAGGCGGTAGTAGACATACTAGGCAAGTAGATTGAGCATAGTTGTCTATGGCTTCAATTTGTGGAAATGCGAGTAATTTTGATTTTGTGTCTAAATTTTTAATGTCATCAGCTAAACTAACAACAAATCAGCCATTTTTATCTTGATCGAGTGATCAAAGGAGGAGTAAGAAGGTATGCATTAAGATCTAATATTGAAGGTCATGAGTCAGGTTTGTTGCTGCCTACAATATGCTGTCAAATAACTTTTAACTTAAACTGAACAACCCAACCCAACCCAACCCATTTGGTTATGAATTATTTTGGGGGGTTGGAAATTTCAGTTAATTTTTCTCTATCATTTGAGTCTGCTCTTTTAATTCTTCATTTGCAACTATTGATTTTATTCCTGCACTTGCAGCCACTGATTTCTCTTCTTTGGTTACAAACCCAGTTTTCGTTTTTTCACTCTCATTACTGATTTAGTTTGTTCACTCGCAGCCACTGATATCATGTTATTAATCCACTCACTTGTCTAAGTACCCTAGCATTATAGATTAGTGCAAATTTGCAGATTTTCATAAGTTAGTTAGTACCCTTTGGTTGTAATTCTTTTGGCGGTTCTCAGGGTTGTTTTGGCTAGTGTTCTGGAATGGCTCAGTTCTACTATTCTTTTATTTTATCTTATGAAAGCCATCTCTTCTTAAATAATTGTATTTGGAGATCCCTGTCAACGAATTGTAGTAGGAACATGCTGTTGTCCAGTGAGATAAGTTGAGTAGCATGAGAGATGGCTCAAATACTCATCGATATCAAAAAAAAGGAAAAAAACTGTATTTGGAGATATTTGTTCATCATAAAATTGGCAAAGATATGTTGTCATAGGGTCCTGATGTTAGTGCTTCTGTGCATAACATATATTCCAGTTTCTATGAACCAAGTGGGATTGTGACGTTTTCTGCCTTCAGGATCTCCAATGCTGACAATCTTTACCAAATTACTGTTGATGGCAAAACATGTCATATGAAAACCTACACCTTTTTTTCTCTGGATGGCAGGGATCTAGATGAGAAGATGCGAGACGTGTTTCACAATTATATAGACGAGCGAGGTGTAAATGAGTCTCTCTTTCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAACTCTTATGCGGTGGTTCAGATCGGTTGGCTCTTTCATCAACGAGCACAAGAACACTAAAGAGAATTAATAGTAAATGAGAATTGGATAGGAAAAATGTCAGCCCAGATGCTAGATTTCATGCAGTTCAGGGTTCAGTCCTCCTATCAGTTAGGTGTATCAGGTAAATGATCAAGTTCATTCTATTATACAATTTTGTATAAGCCCTCTTGTGATGATTTGTTTTTCCTTGTTAAGCCATGGTTTTTCTTTTCCAAACATGATTAACATTGAATTCAATCAATCAATTACTATATATTGCAGCTTCATTGTTGTGGACCCTGTTTTGTTTTTTTCCTG

mRNA sequence

ACTCTCTCAACACAACAATTTACAACAATCGGAAGAAATGCTGAAGAAAGTGTTGGCCGTCACTGCGGTGGCTCTGCGTAGTGGCCGCCGGCCGTCTCTGATGACCACTTGCCGTCATTCCTCCTCCGTGTCCTCCGCCGTCAACTCTTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGAAAGTGAGCCCTCCCTCTCCTTTTTCTATCATTCAAGGGGCACTAGATGGCAATGGACCGGTGCTTACAAGGAACTATGGGAAGGAAGAGGTTAACATTTCAGTTATGCGATTGGCCAACATCGTTCCGGGAGGCGGTGGAGATGACGGAGACGATGAAATTAACCAGTTGTTCCTTCACGTTGCTGTATCGAAGCCGGAGCAGAAGGATAATTTACATTTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAAGCCGAACCCTCGGGGTTCCTCGTTGTTCCATCGGGTTATAATGGTCCCGTGTTCGAGGATCTAGATGAGAAGATGCGAGACGTGTTTCACAATTATATAGACGAGCGAGGTGTAAATGAGTCTCTCTTTCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAACTCTTATGCGGTGGTTCAGATCGGTTGGCTCTTTCATCAACGAGCACAAGAACACTAAAGAGAATTAATAGTAAATGAGAATTGGATAGGAAAAATGTCAGCCCAGATGCTAGATTTCATGCAGTTCAGGGTTCAGTCCTCCTATCAGTTAGGTGTATCAGGTAAATGATCAAGTTCATTCTATTATACAATTTTGTATAAGCCCTCTTGTGATGATTTGTTTTTCCTTGTTAAGCCATGGTTTTTCTTTTCCAAACATGATTAACATTGAATTCAATCAATCAATTACTATATATTGCAGCTTCATTGTTGTGGACCCTGTTTTGTTTTTTTCCTG

Coding sequence (CDS)

ATGCTGAAGAAAGTGTTGGCCGTCACTGCGGTGGCTCTGCGTAGTGGCCGCCGGCCGTCTCTGATGACCACTTGCCGTCATTCCTCCTCCGTGTCCTCCGCCGTCAACTCTTTGCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCTCCAGAATGACGCCTCCTCCGAAAGTGAGCCCTCCCTCTCCTTTTTCTATCATTCAAGGGGCACTAGATGGCAATGGACCGGTGCTTACAAGGAACTATGGGAAGGAAGAGGTTAACATTTCAGTTATGCGATTGGCCAACATCGTTCCGGGAGGCGGTGGAGATGACGGAGACGATGAAATTAACCAGTTGTTCCTTCACGTTGCTGTATCGAAGCCGGAGCAGAAGGATAATTTACATTTTCTTTGTGGGTTGTATCCTGATGCATTAGGTATTCATTCCGTTTCGATGAGACCGAAAGCCGAACCCTCGGGGTTCCTCGTTGTTCCATCGGGTTATAATGGTCCCGTGTTCGAGGATCTAGATGAGAAGATGCGAGACGTGTTTCACAATTATATAGACGAGCGAGGTGTAAATGAGTCTCTCTTTCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAACTCTTATGCGGTGGTTCAGATCGGTTGGCTCTTTCATCAACGAGCACAAGAACACTAAAGAGAATTAA

Protein sequence

MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVSPPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAVSKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFHNYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN

Homology

[Close]

BLAST of Tan0001917 vs. ExPASy Swiss-Prot
Match: Q8W487 (Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g39795 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-11
Identity = 59/233 (25.32%), Postives = 107/233 (45.92%), Query Frame = 0


Query: 4   KVLAVTAVALR-------SGRRPSLMTTCRHSSSVSS-AVNSLLLRSLKEHY---LEISR 63
           +V +++AVA R       S  RP +     +S+++   +    L+R +       L+   
Sbjct: 22  RVRSISAVANRASLARNPSSIRPFVSRALNYSTAIDRISSEQTLIRVIDSEINSALQSDN 81

Query: 64  MTPPPKVSPPS-PFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDE- 123
           +    +++P S PF  I+         LTR+Y  E + + V   + +      DD DDE 
Sbjct: 82  IDSDEEMTPGSFPFR-IEDKPGNQNVTLTRDYNGEHIKVVVSMPSLVSDENDDDDDDDEG 141

Query: 124 -INQLFLHVAVSKPEQKD-NLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVF 183
             N+  + + V+  ++    L F C  +PD + I ++S++    P   L       GP F
Sbjct: 142 PSNESSIPLVVTVTKKSGLTLEFSCMAFPDEIAIDALSVK---HPGDSLEDQLANEGPDF 201

Query: 184 EDLDEKMRDVFHNYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINE 222
           EDLDE ++  F+ +++ RGV  S   FL  ++  K +R    W ++V  F+ +
Sbjct: 202 EDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKVNREYFLWLKNVKEFMEQ 250

[Close]

BLAST of Tan0001917 vs. ExPASy Swiss-Prot
Match: O94675 (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 22/57 (38.60%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 163 YNGPVFEDLDEKMRDVFHNYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFI 220
           Y GP F++LD +++D+FH+Y++ER ++ESL  F+ ++   KE +  + W  SV  F+
Sbjct: 212 YLGPSFKELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQFL 268

[Close]

BLAST of Tan0001917 vs. ExPASy Swiss-Prot
Match: P40513 (Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MAM33 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.0e-05
Identity = 20/58 (34.48%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 163 YNGPVFEDLDEKMRDVFHNYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFIN 221
           Y+GP F +LDE++++    Y++ RGVNE L  F+ A+   KE+   + W   +  F +
Sbjct: 209 YHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMKKFFH 266

[Close]

BLAST of Tan0001917 vs. NCBI nr
Match: XP_038884404.1 (uncharacterized protein At2g39795, mitochondrial [Benincasa hispida])

HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115
Identity = 209/228 (91.67%), Postives = 217/228 (95.18%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK +A TAVALRS RRPSLM TCRHS+SV+SAVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKAMAATAVALRS-RRPSLMVTCRHSTSVTSAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSIIQGALDGNGPVLTRNYGKEEV ISVMRLANIVPGGGGDDGDDEINQLFLHV V
Sbjct: 61  PPSSFSIIQGALDGNGPVLTRNYGKEEVKISVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFH 180
           SK EQKD+LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFEDLDEKMRD+FH
Sbjct: 121 SKLEQKDDLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDIFH 180

Query: 181 NYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN 229
           NYI+ERG+NESLFPFLQAWLYVKEHR LMRWFRSVGSFINEHKN KE+
Sbjct: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEHKNAKED 227

[Close]

BLAST of Tan0001917 vs. NCBI nr
Match: XP_022938797.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG6578831.1 putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016357.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 202/228 (88.60%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR   RPSLM TCRHS+SVS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLH+ V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFH 180
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFEDLDEKMRDVFH
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVFH 180

Query: 181 NYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN 229
           NYI+ERG+NESLFPFLQAWLYVKEHR LMRWFRSVGSFINE KN KE+
Sbjct: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINERKNAKED 228

[Close]

BLAST of Tan0001917 vs. NCBI nr
Match: XP_022134253.1 (uncharacterized protein At2g39795, mitochondrial [Momordica charantia])

HSP 1 Score: 414.1 bits (1063), Expect = 8.0e-112
Identity = 205/230 (89.13%), Postives = 216/230 (93.91%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTC-RHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M+KK++AV A AL+S RRPSLMTTC RHS+SVSSAVNSLLLRSLKEHYLEISRMTPPPKV
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  SPPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGG-DDGDDEINQLFLHV 120
           SPPSPFSII+GALD NGPVLTRN+G+EEVNISVMRLANIVPGGGG DDGD+EINQLFLHV
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDEEINQLFLHV 120

Query: 121 AVSKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDV 180
            VSKPEQ+DNLHFLCGLYPDALGIHSVSMRP+AE SGFLVVPSGYNGPVFEDLDEKMRDV
Sbjct: 121 TVSKPEQRDNLHFLCGLYPDALGIHSVSMRPRAESSGFLVVPSGYNGPVFEDLDEKMRDV 180

Query: 181 FHNYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN 229
            HNYIDERGVNESLFPFLQAWLYVKEHR LMRWFRS GSFINE K  KEN
Sbjct: 181 LHNYIDERGVNESLFPFLQAWLYVKEHRNLMRWFRSAGSFINERKGAKEN 230

[Close]

BLAST of Tan0001917 vs. NCBI nr
Match: XP_023549717.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.7 bits (1062), Expect = 1.0e-111
Identity = 200/226 (88.50%), Postives = 212/226 (93.81%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR  RRPSLM TCR S+SVS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLH+ V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFH 180
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFEDLDEKMRDV H
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLH 180

Query: 181 NYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTK 227
           NYI+ERG+NESLFPFLQAWLYVKEHR LMRWFRSVGSFINE KN K
Sbjct: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAK 226

[Close]

BLAST of Tan0001917 vs. NCBI nr
Match: XP_022992760.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima])

HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-111
Identity = 199/228 (87.28%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR   RPSLM TCRHS++VS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLHV V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFH 180
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFEDLDEKMRDV H
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLH 180

Query: 181 NYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN 229
           NYI+ERG+N+SLF FLQAWLYVKEHR LMRWFRSVGSFINE KN KE+
Sbjct: 181 NYIEERGINQSLFSFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKED 228

[Close]

BLAST of Tan0001917 vs. ExPASy TrEMBL
Match: A0A6J1FF36 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444904 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.4e-114
Identity = 202/228 (88.60%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR   RPSLM TCRHS+SVS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLH+ V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFH 180
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFEDLDEKMRDVFH
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVFH 180

Query: 181 NYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN 229
           NYI+ERG+NESLFPFLQAWLYVKEHR LMRWFRSVGSFINE KN KE+
Sbjct: 181 NYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINERKNAKED 228

[Close]

BLAST of Tan0001917 vs. ExPASy TrEMBL
Match: A0A6J1C1F6 (uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006555 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.8e-112
Identity = 205/230 (89.13%), Postives = 216/230 (93.91%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTC-RHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60
           M+KK++AV A AL+S RRPSLMTTC RHS+SVSSAVNSLLLRSLKEHYLEISRMTPPPKV
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  SPPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGG-DDGDDEINQLFLHV 120
           SPPSPFSII+GALD NGPVLTRN+G+EEVNISVMRLANIVPGGGG DDGD+EINQLFLHV
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDEEINQLFLHV 120

Query: 121 AVSKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDV 180
            VSKPEQ+DNLHFLCGLYPDALGIHSVSMRP+AE SGFLVVPSGYNGPVFEDLDEKMRDV
Sbjct: 121 TVSKPEQRDNLHFLCGLYPDALGIHSVSMRPRAESSGFLVVPSGYNGPVFEDLDEKMRDV 180

Query: 181 FHNYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN 229
            HNYIDERGVNESLFPFLQAWLYVKEHR LMRWFRS GSFINE K  KEN
Sbjct: 181 LHNYIDERGVNESLFPFLQAWLYVKEHRNLMRWFRSAGSFINERKGAKEN 230

[Close]

BLAST of Tan0001917 vs. ExPASy TrEMBL
Match: A0A6J1JWM0 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111489000 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.6e-112
Identity = 199/228 (87.28%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKKV AV AVALR   RPSLM TCRHS++VS+AVNSLLLRSLKEHYLEISRMTPPPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII+GALDGNGPVLTR+YG EE+N+SVMRLANIVPGGGGDDGDDEINQLFLHV V
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFH 180
           SKPEQ+++LHFLCGLYPDALGIHSVSMRPKAE SGFLVVPSGYNGPVFEDLDEKMRDV H
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAESSGFLVVPSGYNGPVFEDLDEKMRDVLH 180

Query: 181 NYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN 229
           NYI+ERG+N+SLF FLQAWLYVKEHR LMRWFRSVGSFINE KN KE+
Sbjct: 181 NYIEERGINQSLFSFLQAWLYVKEHRNLMRWFRSVGSFINEPKNAKED 228

[Close]

BLAST of Tan0001917 vs. ExPASy TrEMBL
Match: A0A0A0KCG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.6e-105
Identity = 194/230 (84.35%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           MLKK++A +AVALRSG RPSLM TCRHS+S SSAVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII GALDGNGPVLT+NYGKEE+NISVMRLANIV GGGG D DDEINQLFLHV V
Sbjct: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRGGGGGDDDDEINQLFLHVTV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEP--SGFLVVPSGYNGPVFEDLDEKMRDV 180
           SK EQKDNLHFLCGLYPDALGIHSVSMRPKAE   SGFLVVPS YNGP FEDLDEKMRD+
Sbjct: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFEDLDEKMRDM 180

Query: 181 FHNYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN 229
           FHNYI+ERGVNESLFPFLQAWLYVKEHR L+RWFRSVG+FI E KN K++
Sbjct: 181 FHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD 230

[Close]

BLAST of Tan0001917 vs. ExPASy TrEMBL
Match: A0A1S3C3N7 (uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496527 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104
Identity = 191/230 (83.04%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MLKKVLAVTAVALRSGRRPSLMTTCRHSSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVS 60
           ML K++A TAVALRSG RPSLM TCRHS+S SSAVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLNKLMAATAVALRSGSRPSLMVTCRHSTSASSAVNSFLLRSLKEHYLEITRMPAPPKVS 60

Query: 61  PPSPFSIIQGALDGNGPVLTRNYGKEEVNISVMRLANIVPGGGGDDGDDEINQLFLHVAV 120
           PPS FSII GALDG+GPVLT+NYGKEEVNISVMRL+NIV GGGGD+ DD+INQLFLHV+V
Sbjct: 61  PPSSFSIITGALDGHGPVLTKNYGKEEVNISVMRLSNIVRGGGGDNDDDDINQLFLHVSV 120

Query: 121 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEP--SGFLVVPSGYNGPVFEDLDEKMRDV 180
           SKPEQKD LHFLCGLYPDALGIHSVSMRPK E   SGFL+VPS YNGP FEDLDEKMRD+
Sbjct: 121 SKPEQKDTLHFLCGLYPDALGIHSVSMRPKGESSGSGFLLVPSSYNGPTFEDLDEKMRDM 180

Query: 181 FHNYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINEHKNTKEN 229
           FHNYIDERGVNESLFPFLQAWLYVKEHR L+RWFRSVG+FI E KN K++
Sbjct: 181 FHNYIDERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD 230

[Close]

BLAST of Tan0001917 vs. TAIR 10
Match: AT4G32605.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 282.3 bits (721), Expect = 3.4e-76
Identity = 134/200 (67.00%), Postives = 168/200 (84.00%), Query Frame = 0


Query: 28  SSSVSSAVNSLLLRSLKEHYLEISRMTPPPKVSPPSPFSIIQGALDGN-GPVLTRNYGKE 87
           S++VS+AV+S+LLRSLKEHYLE+S+MTPPPKVSPPSPF I++G+L+G+ G VL ++ G E
Sbjct: 29  SANVSAAVDSMLLRSLKEHYLEVSKMTPPPKVSPPSPFEIVKGSLEGSTGAVLKKSVGNE 88

Query: 88  EVNISVMRLANIVPGGGGDDGDDEINQLFLHVAVSKPEQKDNLHFLCGLYPDALGIHSVS 147
           E+N+ VMRLA+    GG ++ D  INQLFLHVAVSKP Q D+LHFLCGLYPDALGIHSVS
Sbjct: 89  EINLFVMRLAH----GGDEEDDGGINQLFLHVAVSKPNQPDSLHFLCGLYPDALGIHSVS 148

Query: 148 MRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFHNYIDERGVNESLFPFLQAWLYVKEHR 207
           MRPK E       P+ Y GP FE+LDEKMRDVFH +++ERGVNESLFPFLQAWLYVK+HR
Sbjct: 149 MRPKLEALEMSDDPTQYTGPSFEELDEKMRDVFHGFLEERGVNESLFPFLQAWLYVKDHR 208

Query: 208 TLMRWFRSVGSFINEHKNTK 227
            L+RWF+SVG+F++E+ + +
Sbjct: 209 NLLRWFKSVGTFVHENPSAE 224

[Close]

BLAST of Tan0001917 vs. TAIR 10
Match: AT1G80720.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 82.0 bits (201), Expect = 6.7e-16
Identity = 52/187 (27.81%), Postives = 89/187 (47.59%), Query Frame = 0


Query: 39  LLRSLKEHYLEISRMTPPPKVSPPSPFS--IIQGALDGNGPVLTRNYG-KEEVNISVMRL 98
           L+R+  E+ L+ S     P + PP+ F    +          L RN+G KE++ I     
Sbjct: 13  LIRNEIEYELDHS-----PPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDIKIEATMF 72

Query: 99  ANIVPGGGGDDGDDE-INQLFLHVAVSKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPS 158
              VP       + E I  +   V +SK    + L  +C  +PD + I  + +R      
Sbjct: 73  DRSVPTSKSTKTEPEYILHITFIVNISKAGATEALEIMCSAWPDTIEISKLCIR-----R 132

Query: 159 GFLVVPSGYNGPVFEDLDEKMRDVFHNYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRS 218
           G    PS Y GP FE+LD++++D  + +++ERG+++ L  FL  ++  K     +RW  S
Sbjct: 133 GINTSPSSYGGPEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWMES 189

Query: 219 VGSFINE 222
           V S++ +
Sbjct: 193 VKSYVEQ 189

[Close]

BLAST of Tan0001917 vs. TAIR 10
Match: AT5G05990.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-14
Identity = 50/159 (31.45%), Postives = 76/159 (47.80%), Query Frame = 0


Query: 79  LTRNYGKEEVNISVMRLANIVPGGGGDDGDDE------------------INQLFLHVAV 138
           LTR Y  E V + V  + N+V G   DD DDE                   + + L V +
Sbjct: 104 LTREYEGETVKVEV-HMTNLVTGDKEDDEDDEEEAENEEDEDEDKPLKPKQSNVPLLVTL 163

Query: 139 SKPEQKDNLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFH 198
           SK +   +L F C  +PD + I  + +    +PS   +    Y GP F  LDEK+R  FH
Sbjct: 164 SK-KTGPSLEFRCTAFPDRIAIKDMWVTFPDDPSKDEL---AYEGPSFRVLDEKLRKAFH 223

Query: 199 NYIDERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFI 220
            YI+ RG+  S+  FL  ++  K+ R  + W +S+ +F+
Sbjct: 224 RYIEIRGIKPSMINFLHEYMINKDSREHLLWLKSLKNFV 257

[Close]

BLAST of Tan0001917 vs. TAIR 10
Match: AT1G15870.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13
Identity = 39/146 (26.71%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 79  LTRNYG-KEEVNISVMRLANIVPGGGGDDGDDEINQLFLH--VAVSKPEQKDNLHFLCGL 138
           L R +G KE++ I        VP       D E  QL +   V +SK +  + L  +C  
Sbjct: 102 LRRKFGEKEDIKIEATMFDGSVPSSKSTTSDPEDVQLHITFIVNISKGD-GETLEIMCSA 161

Query: 139 YPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFHNYIDERGVNESLFPF 198
           +PD + I    +R  ++ S     P+ Y GP F++++++++D  + +++ERG+++ L  F
Sbjct: 162 WPDTIQITKFFVRKSSQNS-----PNAYIGPEFQEMEDELQDSVYRFLEERGISDDLAEF 221

Query: 199 LQAWLYVKEHRTLMRWFRSVGSFINE 222
           L  ++  K+    +RW  +V S++ +
Sbjct: 222 LHQYMKNKDKAEYIRWMETVKSYVEQ 241

[Close]

BLAST of Tan0001917 vs. TAIR 10
Match: AT3G55605.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 41/157 (26.11%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 79  LTRNYGKEEVNISVMRLANIVPGGGGDDGDDEI-------------NQLFLHVAVSKPEQ 138
           LTR Y  E++ + V      +PG   D+ +D++             N+  + + V+  ++
Sbjct: 110 LTREYNGEQIKVEVS-----MPGLAMDENEDDVDDDEDGDGRHEKSNESSIPLVVTVTKK 169

Query: 139 KD-NLHFLCGLYPDALGIHSVSMRPKAEPSGFLVVPSGYNGPVFEDLDEKMRDVFHNYID 198
              +L F C  +PD + I  +S+    + S   +    Y+GP F++LDE MR  FH +++
Sbjct: 170 SGLSLEFSCTAFPDEIVIDGLSVNRPDDSSEEQLT---YDGPDFQELDENMRKSFHKFLE 229

Query: 199 ERGVNESLFPFLQAWLYVKEHRTLMRWFRSVGSFINE 222
            RG+  S   FL  ++  K+ R  + W + + +F+ E
Sbjct: 230 TRGIKASATDFLYEYMMKKDSREYLLWLKKLKTFVQE 258

The following BLAST results are available for this feature:

BLAST of Tan0001917 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W487	3.7e-11	25.32	Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
O94675	1.2e-06	38.60	Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]
P40513	4.0e-05	34.48	Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 2045...	[more]

BLAST of Tan0001917 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884404.1	2.6e-115	91.67	uncharacterized protein At2g39795, mitochondrial [Benincasa hispida]	[more]
XP_022938797.1	1.1e-113	88.60	uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG657883...	[more]
XP_022134253.1	8.0e-112	89.13	uncharacterized protein At2g39795, mitochondrial [Momordica charantia]	[more]
XP_023549717.1	1.0e-111	88.50	uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022992760.1	1.8e-111	87.28	uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima]	[more]

BLAST of Tan0001917 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FF36	5.4e-114	88.60	uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1C1F6	3.8e-112	89.13	uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 ...	[more]
A0A6J1JWM0	8.6e-112	87.28	uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A0A0KCG3	4.6e-105	84.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1	[more]
A0A1S3C3N7	1.7e-104	83.04	uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Tan0001917 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32605.1	3.4e-76	67.00	Mitochondrial glycoprotein family protein	[more]
AT1G80720.1	6.7e-16	27.81	Mitochondrial glycoprotein family protein	[more]
AT5G05990.1	1.6e-14	31.45	Mitochondrial glycoprotein family protein	[more]
AT1G15870.1	1.1e-13	26.71	Mitochondrial glycoprotein family protein	[more]
AT3G55605.1	3.1e-13	26.11	Mitochondrial glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036561	Mitochondrial glycoprotein superfamily	GENE3D	3.10.280.10	Mitochondrial glycoprotein	coord: 36..169 e-value: 1.0E-8 score: 37.3
IPR036561	Mitochondrial glycoprotein superfamily	SUPERFAMILY	54529	Mitochondrial glycoprotein MAM33-like	coord: 41..168
None	No IPR available	PANTHER	PTHR31365	EXPRESSED PROTEIN	coord: 1..169
None	No IPR available	PANTHER	PTHR31365:SF2	MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN-LIKE	coord: 1..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001917.1	Tan0001917.1	mRNA
Tan0001917.2	Tan0001917.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005759	mitochondrial matrix