Tan0001608.1 (mRNA) Snake gourd v1

Overview
NameTan0001608.1
TypemRNA
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG11: 8032878 .. 8036156 (+)
Sequence length1734
RNA-Seq ExpressionTan0001608.1
SyntenyTan0001608.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTTCTCCATGTTTGCCATTTTGCAGCAAAGTTAGGACGATACAAAGAGAAGGGACTCTTTCAGTTTCTTAATCTTCGTCTTTGCACTAGCCAATTTTCTGCATCATCATCCATTGTTGAGTGTGAAAAAGCAACTACAGAGGATTTCAATGGTACCCATGTGTCGTATGTGCACGAGCTGCTGAAATTGTGTGCCAAAAGAAGATTGTTCTTGCAAGGGAAGGCTTGCCATGCCCAAATTCTGCTTATGGGATTGCAAAGAGATACTTTAACGTCGAATATTCTCATCAACATGTACTCAAAATGTGGTTCAGTTGATGTTGCACGCCAAGTGTTCGATGAAATATCCCGCCGAAGTTTGGTGTCGTGGAACACCATGATTGGGTCGCTTACTCAGAATGGTGGGGAGAATGAGGCTCTTGGTCTTTTGCTGCAGATGCAAAGAGAAGGAACCCCTTTTAGTGAATTCACCATTTCGAGTGTTCTATGCGCCTGTGCAGCTAAATGTGCTCTCTTTGAATGCCAGCTGCTTCATGCCTTTGCTGTTAAGGCTGCAATGGATCTGAATGTTTTTGTTGCAACTGCATTGCTTGATGTTTATGCAAAATGTGGTTTGATGAATGATGCGGCTTGTGTTTTTGAGTCCATGCCTGAGAGGAGTGTTGTCACATGGAGTTCAATGGCAGCAGGGTACGTGCAAAATGAGCTATATGAGGAAGCTTTGGCATTGTTTTGTAAAGCTCGGGAAACGGGGTTGAAACAGGACGAGTTTCTAATGTCATCTGTGATTTGTGCTTGTGCTGGATTGGCAGCCATGATAGAAGGGAACCAGGTGAATGCTTTGCTATCTAAATCTGGTTTTTGTTCTAATATCTTTGTTGCTTCTTCTCTTATTGACATGTATGCAAAATGTGGTGGCATTGGAGAAGCTTACAATGTGTTTCGAGATGTAGAAGTGAGAAATGTTGTTTTGTGGAATGCTATGATATGTGGCTTGTCGAGACATGCTCGTTCACTCGAGGTGATGATTTTATTTGAGAAAATGCAGCAGATGGGCTTGAGTCCAAATGATGTTACTTTTGTTTCTGTTTTGTCTGTTTGTGGTCATATGGGATTGGTTGAAAAAGGACAGAAATATTTTGACCTGATGATAAAAGAGCATCATTTGGCACCAAATGTCCTTCACTATTCTTGTATGGTTGACATTCTTAGTCGGGCAGGGCAGACTTTTGAGGCTTACAATTTGATAAGTAAAATGCCTTTTAATGCCTCTGCTTCCATGTGGGGTTCCCTTCTGGCTTCTTGTAGGAGCCATGGGAATCTTGAACTTGCTGAGGTTGCTGCTAAAAATTTGTTTGAGATTGAACCACAAAATGCAGGAAACTATTTGTTGCTATCCAACATGTATGCAGCAAATGGGAAGTGGAACGAAGTTGCGAAGGCAAGGAAGCTCCTTAAAGAAAGTGATGTGAAGAAAGAGAGGGGCAAGAGTTGGATTGAGATTAAGGACAAGGTTCACTCGTTTATGGTCGGAGAGAGGAATCATCCTAAGATTTCTGAAATTTACTCAAAGTTGAACGAGTTGATGGAAGAATTACCGAAGCTTGGTTACAAGGTGGAGACCGAGCATGATCTTCATCAAGTGGGAGAGAGTAGAAAACAAGAACTTTTGAGGCATCACAGCGAGAAACTTGCTTTTACTACGGGATTATTGTTCTTACCTCCAAATGCACCCATTAGGATTATGAAAAACCTTAGAATCTGTGGAGACTGCCACTCTTTTATGAAGCTTGCCTCGGGATTTGTTCAGAGAGATGTAATAGTCAGGGACACCAACCGATTTCACCATTTTAAGGACGGGCATTGTTCTTGTGGGGATTTTTGGTGAATATCAGTTTTCTTTTGAAGTGCTCCTATTCCTGTTTTATTTTATCAAACGTGCAACTGCAGTAAAAGGCTTTGCAAATTTAAGTTGAAACTCCCTCTCTATAATAGCCTTAACCTCACTCAATACATTTATTCGTTCAAATTCTCCCATGAAGATTGACATGTGCCACCGGTTTCTTTTCAATTTGGCTGTATCTCTTACCATGGCATGAGCTTGTTAAGATGTTAATCCTTAGAGCACTGAACGCTATGCTGCCAATATGTAACCAAATTTTTTTATCATTCAGGCATAATGTTCAGACTTCAGGCTACTGCAGAATTGATAGGATGGAAAATGGTGATAAATCCTACAAGAGTTGTTCCAGGTAAGTTGATCCCATTTTCTAGTAGAATGGCTACCAAGATATCATGAGCTAGAATAAGTTGATTTACGCCTCAAAGGCTGGGAGGGAGGGTGACTTGATATTATTGAGGAGGCATTTTTAATGATGCTCTTGTCATAATATCATGGATTCACTAGTTAAGCAATTGGTTTAGTGCTAGATTCAATTACTATCCCACAAATATAAGAGCCACTCCATAGCTTTTGGACTGTATCTTTCAGGTTATACCGAGCAGTAAATACTGGTATAAACCATGACTTGCAACTTAAAGATCATCCTGTTATATAGAGTGATTTTGTTCTTTTCAGAGCATCTTATCACCTCTGCACTGGGTTAAGTTCTCCAGATCCCAGTTGAGAAATGCTATCATCTGTCAGAGCATTAAGAAGAACAAGAAGACAGGAAGCTGAACTTTCCCAATATTCCCATAAAATGTCTTCCTGTTGAAAAGTGCCTCTCTCACACAAAACTCTTTAGTTTCACTCACTTCATTCGAAGCACTTGTCTACCGACCTCCATTTCCAGAAGCAGAGTTCATTTTTTACATGGAGGCAACAGTGAACTAGGACAGGCTTGGCTACTACGTCGTTCCTCCGAGGACCCGGTTCATGGTTATTCAGTTTTTTCAGCTGTTAATAGTTGCCATTGCATTTGTTTCTCCAGCTTGCAGAGACGAGAAACCGTTCTGGATGAAGCATCAAATCATGCTCGACATTTTTATCTTCATGTGAGGGGGCTTCAGATCACGGTGCTCGAGTACGAATATGAGCAGCAGAAATTTGGAAAGGTATGCGGTCGCTTCATGCTATTGTCTTCTTAGGCGCTTTGTTTTAGATCAGTTAATACCAATCTGAAGCATATATGAACAAGAACATCTAGTTCTAATCACCTCTCTTGTTTTTGCACTTCTAAGAATCCTTCTGGACTTCTGTTTATGTGACCAAGGGAGGCTAAACACTGACCATATTCTCCAGTTTATTGAAATATCATTCCCATTCCTTTAA

mRNA sequence

ATGGGATTTCTCCATGTTTGCCATTTTGCAGCAAAGTTAGGACGATACAAAGAGAAGGGACTCTTTCAGTTTCTTAATCTTCGTCTTTGCACTAGCCAATTTTCTGCATCATCATCCATTGTTGAGTGTGAAAAAGCAACTACAGAGGATTTCAATGGTACCCATGCTGCAATGGATCTGAATGTTTTTGTTGCAACTGCATTGCTTGATGTTTATGCAAAATGTGGTTTGATGAATGATGCGGCTTGTGTTTTTGAGTCCATGCCTGAGAGGAGTGTTGTCACATGGAGTTCAATGGCAGCAGGGTACGTGCAAAATGAGCTATATGAGGAAGCTTTGGCATTGTTTTGTAAAGCTCGGGAAACGGGGTTGAAACAGGACGAGTTTCTAATGTCATCTGTGATTTGTGCTTGTGCTGGATTGGCAGCCATGATAGAAGGGAACCAGGTGAATGCTTTGCTATCTAAATCTGGTTTTTGTTCTAATATCTTTGTTGCTTCTTCTCTTATTGACATGTATGCAAAATGTGGTGGCATTGGAGAAGCTTACAATGTGTTTCGAGATGTAGAAGTGAGAAATGTTGTTTTGTGGAATGCTATGATATGTGGCTTGTCGAGACATGCTCGTTCACTCGAGGTGATGATTTTATTTGAGAAAATGCAGCAGATGGGCTTGAGTCCAAATGATGTTACTTTTGTTTCTGTTTTGTCTGTTTGTGGTCATATGGGATTGGTTGAAAAAGGACAGAAATATTTTGACCTGATGATAAAAGAGCATCATTTGGCACCAAATGTCCTTCACTATTCTTGTATGGTTGACATTCTTAGTCGGGCAGGGCAGACTTTTGAGGCTTACAATTTGATAAGTAAAATGCCTTTTAATGCCTCTGCTTCCATGTGGGGTTCCCTTCTGGCTTCTTGTAGGAGCCATGGGAATCTTGAACTTGCTGAGGTTGCTGCTAAAAATTTGTTTGAGATTGAACCACAAAATGCAGGAAACTATTTGTTGCTATCCAACATGTATGCAGCAAATGGGAAGTGGAACGAAGTTGCGAAGGCAAGGAAGCTCCTTAAAGAAAGTGATGTGAAGAAAGAGAGGGGCAAGAGTTGGATTGAGATTAAGGACAAGGTTCACTCGTTTATGGTCGGAGAGAGGAATCATCCTAAGATTTCTGAAATTTACTCAAAGTTGAACGAGTTGATGGAAGAATTACCGAAGCTTGGTTACAAGGTGGAGACCGAGCATGATCTTCATCAAGTGGGAGAGAGTAGAAAACAAGAACTTTTGAGGCATCACAGCGAGAAACTTGCTTTTACTACGGGATTATTGTTCTTACCTCCAAATGCACCCATTAGGATTATGAAAAACCTTAGAATCTGTGGAGACTGCCACTCTTTTATGAAGCTTGCCTCGGGATTTGTTCAGAGAGATGTAATAGTCAGGGACACCAACCGATTTCACCATTTTAAGGACGGGCATTGTTCTTGTGGGGATTTTTGCACTTGTCTACCGACCTCCATTTCCAGAAGCAGACTGTTAATAGTTGCCATTGCATTTGTTTCTCCAGCTTGCAGAGACGAGAAACCCATATATGAACAAGAACATCTAGTTCTAATCACCTCTCTTGTTTTTGCACTTCTAAGAATCCTTCTGGACTTCTGTTTATGTGACCAAGGGAGGCTAAACACTGACCATATTCTCCAGTTTATTGAAATATCATTCCCATTCCTTTAA

Coding sequence (CDS)

ATGGGATTTCTCCATGTTTGCCATTTTGCAGCAAAGTTAGGACGATACAAAGAGAAGGGACTCTTTCAGTTTCTTAATCTTCGTCTTTGCACTAGCCAATTTTCTGCATCATCATCCATTGTTGAGTGTGAAAAAGCAACTACAGAGGATTTCAATGGTACCCATGCTGCAATGGATCTGAATGTTTTTGTTGCAACTGCATTGCTTGATGTTTATGCAAAATGTGGTTTGATGAATGATGCGGCTTGTGTTTTTGAGTCCATGCCTGAGAGGAGTGTTGTCACATGGAGTTCAATGGCAGCAGGGTACGTGCAAAATGAGCTATATGAGGAAGCTTTGGCATTGTTTTGTAAAGCTCGGGAAACGGGGTTGAAACAGGACGAGTTTCTAATGTCATCTGTGATTTGTGCTTGTGCTGGATTGGCAGCCATGATAGAAGGGAACCAGGTGAATGCTTTGCTATCTAAATCTGGTTTTTGTTCTAATATCTTTGTTGCTTCTTCTCTTATTGACATGTATGCAAAATGTGGTGGCATTGGAGAAGCTTACAATGTGTTTCGAGATGTAGAAGTGAGAAATGTTGTTTTGTGGAATGCTATGATATGTGGCTTGTCGAGACATGCTCGTTCACTCGAGGTGATGATTTTATTTGAGAAAATGCAGCAGATGGGCTTGAGTCCAAATGATGTTACTTTTGTTTCTGTTTTGTCTGTTTGTGGTCATATGGGATTGGTTGAAAAAGGACAGAAATATTTTGACCTGATGATAAAAGAGCATCATTTGGCACCAAATGTCCTTCACTATTCTTGTATGGTTGACATTCTTAGTCGGGCAGGGCAGACTTTTGAGGCTTACAATTTGATAAGTAAAATGCCTTTTAATGCCTCTGCTTCCATGTGGGGTTCCCTTCTGGCTTCTTGTAGGAGCCATGGGAATCTTGAACTTGCTGAGGTTGCTGCTAAAAATTTGTTTGAGATTGAACCACAAAATGCAGGAAACTATTTGTTGCTATCCAACATGTATGCAGCAAATGGGAAGTGGAACGAAGTTGCGAAGGCAAGGAAGCTCCTTAAAGAAAGTGATGTGAAGAAAGAGAGGGGCAAGAGTTGGATTGAGATTAAGGACAAGGTTCACTCGTTTATGGTCGGAGAGAGGAATCATCCTAAGATTTCTGAAATTTACTCAAAGTTGAACGAGTTGATGGAAGAATTACCGAAGCTTGGTTACAAGGTGGAGACCGAGCATGATCTTCATCAAGTGGGAGAGAGTAGAAAACAAGAACTTTTGAGGCATCACAGCGAGAAACTTGCTTTTACTACGGGATTATTGTTCTTACCTCCAAATGCACCCATTAGGATTATGAAAAACCTTAGAATCTGTGGAGACTGCCACTCTTTTATGAAGCTTGCCTCGGGATTTGTTCAGAGAGATGTAATAGTCAGGGACACCAACCGATTTCACCATTTTAAGGACGGGCATTGTTCTTGTGGGGATTTTTGCACTTGTCTACCGACCTCCATTTCCAGAAGCAGACTGTTAATAGTTGCCATTGCATTTGTTTCTCCAGCTTGCAGAGACGAGAAACCCATATATGAACAAGAACATCTAGTTCTAATCACCTCTCTTGTTTTTGCACTTCTAAGAATCCTTCTGGACTTCTGTTTATGTGACCAAGGGAGGCTAAACACTGACCATATTCTCCAGTTTATTGAAATATCATTCCCATTCCTTTAA

Protein sequence

MGFLHVCHFAAKLGRYKEKGLFQFLNLRLCTSQFSASSSIVECEKATTEDFNGTHAAMDLNVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRKQELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDVIVRDTNRFHHFKDGHCSCGDFCTCLPTSISRSRLLIVAIAFVSPACRDEKPIYEQEHLVLITSLVFALLRILLDFCLCDQGRLNTDHILQFIEISFPFL
Homology
BLAST of Tan0001608.1 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 584.3 bits (1505), Expect = 1.5e-165
Identity = 290/494 (58.70%), Postives = 374/494 (75.71%), Query Frame = 0

Query: 15  RYKEKGLFQFLNLR---LCTSQFSASSSI----VECEKATTEDFN--GTHAAMDLNVFVA 74
           R + + L  FL +R      S+F+ SS +    V C+    +  +       +DLN++V 
Sbjct: 141 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200

Query: 75  TALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLK 134
           TALLD+YAKCG++ DA  VFESM ++S VTWSSM AGYVQN+ YEEAL L+ +A+   L+
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260

Query: 135 QDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNV 194
           Q++F +SSVICAC+ LAA+IEG Q++A++ KSGF SN+FVASS +DMYAKCG + E+Y +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320

Query: 195 FRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLV 254
           F +V+ +N+ LWN +I G ++HAR  EVMILFEKMQQ G+ PN+VTF S+LSVCGH GLV
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380

Query: 255 EKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLA 314
           E+G+++F LM   + L+PNV+HYSCMVDIL RAG   EAY LI  +PF+ +AS+WGSLLA
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440

Query: 315 SCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKE 374
           SCR + NLELAEVAA+ LFE+EP+NAGN++LLSN+YAAN +W E+AK+RKLL++ DVKK 
Sbjct: 441 SCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKV 500

Query: 375 RGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRK 434
           RGKSWI+IKDKVH+F VGE  HP+I EI S L+ L+ +  K GYK   EH+LH V   +K
Sbjct: 501 RGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKK 560

Query: 435 QELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDVIVRDTNR 494
           +ELL  HSEKLA   GL+ LP ++P+RIMKNLRIC DCH FMK AS   +R +IVRD NR
Sbjct: 561 EELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 620

Query: 495 FHHFKDGHCSCGDF 500
           FHHF DGHCSCGDF
Sbjct: 621 FHHFSDGHCSCGDF 634

BLAST of Tan0001608.1 vs. ExPASy Swiss-Prot
Match: Q9LTF4 (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.4e-115
Identity = 208/441 (47.17%), Postives = 296/441 (67.12%), Query Frame = 0

Query: 59  DLNVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCK 118
           D +VFV ++L+D+YAKCG +  A  +F+ MP+R+VVTWS M  GY Q    EEAL LF +
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207

Query: 119 ARETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGG 178
           A    L  +++  SSVI  CA    +  G Q++ L  KS F S+ FV SSL+ +Y+KCG 
Sbjct: 208 ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGV 267

Query: 179 IGEAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSV 238
              AY VF +V V+N+ +WNAM+   ++H+ + +V+ LF++M+  G+ PN +TF++VL+ 
Sbjct: 268 PEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327

Query: 239 CGHMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASAS 298
           C H GLV++G+ YFD M KE  + P   HY+ +VD+L RAG+  EA  +I+ MP + + S
Sbjct: 328 CSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 387

Query: 299 MWGSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLK 358
           +WG+LL SC  H N ELA  AA  +FE+ P ++G ++ LSN YAA+G++ + AKARKLL+
Sbjct: 388 VWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 447

Query: 359 ESDVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLH 418
           +   KKE G SW+E ++KVH+F  GER H K  EIY KL EL EE+ K GY  +T + L 
Sbjct: 448 DRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLR 507

Query: 419 QVGESRKQELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDV 478
           +V    K + +R+HSE+LA   GL+  P + PIR+MKNLR+CGDCH+ +K  S   +R +
Sbjct: 508 EVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVI 567

Query: 479 IVRDTNRFHHFKDGHCSCGDF 500
           IVRD NRFH F+DG CSC D+
Sbjct: 568 IVRDNNRFHRFEDGKCSCNDY 587

BLAST of Tan0001608.1 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 9.4e-112
Identity = 194/439 (44.19%), Postives = 288/439 (65.60%), Query Frame = 0

Query: 61  NVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKAR 120
           NV     ++  YA+CG +++A  +F+ MP+R  V+W++M AGY Q+    EAL LF +  
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401

Query: 121 ETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIG 180
             G + +    SS +  CA + A+  G Q++  L K G+ +  FV ++L+ MY KCG I 
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461

Query: 181 EAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCG 240
           EA ++F+++  +++V WN MI G SRH      +  FE M++ GL P+D T V+VLS C 
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521

Query: 241 HMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMW 300
           H GLV+KG++YF  M +++ + PN  HY+CMVD+L RAG   +A+NL+  MPF   A++W
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 581

Query: 301 GSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKES 360
           G+LL + R HGN ELAE AA  +F +EP+N+G Y+LLSN+YA++G+W +V K R  +++ 
Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641

Query: 361 DVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQV 420
            VKK  G SWIEI++K H+F VG+  HP+  EI++ L EL   + K GY  +T   LH V
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 701

Query: 421 GESRKQELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDVIV 480
            E  K+ ++R+HSE+LA   G++ +    PIR++KNLR+C DCH+ +K  +    R +I+
Sbjct: 702 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 761

Query: 481 RDTNRFHHFKDGHCSCGDF 500
           RD NRFHHFKDG CSCGD+
Sbjct: 762 RDNNRFHHFKDGSCSCGDY 780

BLAST of Tan0001608.1 vs. ExPASy Swiss-Prot
Match: Q9CAA8 (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 5.1e-110
Identity = 187/439 (42.60%), Postives = 289/439 (65.83%), Query Frame = 0

Query: 61  NVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKAR 120
           +++V +AL+D+Y KC  ++ A  VF+ M +++VV+W++M  GY Q    EEA+ +F   +
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363

Query: 121 ETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIG 180
            +G+  D + +   I ACA ++++ EG+Q +     SG    + V++SL+ +Y KCG I 
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423

Query: 181 EAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCG 240
           ++  +F ++ VR+ V W AM+   ++  R++E + LF+KM Q GL P+ VT   V+S C 
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483

Query: 241 HMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMW 300
             GLVEKGQ+YF LM  E+ + P++ HYSCM+D+ SR+G+  EA   I+ MPF   A  W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543

Query: 301 GSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKES 360
            +LL++CR+ GNLE+ + AA++L E++P +   Y LLS++YA+ GKW+ VA+ R+ ++E 
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603

Query: 361 DVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQV 420
           +VKKE G+SWI+ K K+HSF   + + P + +IY+KL EL  ++   GYK +T    H V
Sbjct: 604 NVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDV 663

Query: 421 GESRKQELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDVIV 480
            E+ K ++L +HSE+LA   GL+F+P   PIR+ KNLR+C DCH+  K  S    R+++V
Sbjct: 664 EEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILV 723

Query: 481 RDTNRFHHFKDGHCSCGDF 500
           RD  RFH FKDG CSCGDF
Sbjct: 724 RDAVRFHRFKDGTCSCGDF 742

BLAST of Tan0001608.1 vs. ExPASy Swiss-Prot
Match: Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.5e-109
Identity = 191/441 (43.31%), Postives = 290/441 (65.76%), Query Frame = 0

Query: 59  DLNVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCK 118
           DL+++V++ +LD+Y KCG M+ A   F+S+P    V W++M +G ++N   E A  +F +
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608

Query: 119 ARETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGG 178
            R  G+  DEF ++++  A + L A+ +G Q++A   K    ++ FV +SL+DMYAKCG 
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668

Query: 179 IGEAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSV 238
           I +AY +F+ +E+ N+  WNAM+ GL++H    E + LF++M+ +G+ P+ VTF+ VLS 
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728

Query: 239 CGHMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASAS 298
           C H GLV +  K+   M  ++ + P + HYSC+ D L RAG   +A NLI  M   ASAS
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788

Query: 299 MWGSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLK 358
           M+ +LLA+CR  G+ E  +  A  L E+EP ++  Y+LLSNMYAA  KW+E+  AR ++K
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848

Query: 359 ESDVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLH 418
              VKK+ G SWIE+K+K+H F+V +R++ +   IY K+ +++ ++ + GY  ET+  L 
Sbjct: 849 GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908

Query: 419 QVGESRKQELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDV 478
            V E  K+  L +HSEKLA   GLL  PP+ PIR++KNLR+CGDCH+ MK  +    R++
Sbjct: 909 DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREI 968

Query: 479 IVRDTNRFHHFKDGHCSCGDF 500
           ++RD NRFH FKDG CSCGD+
Sbjct: 969 VLRDANRFHRFKDGICSCGDY 989

BLAST of Tan0001608.1 vs. NCBI nr
Match: XP_022992702.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X3 [Cucurbita maxima])

HSP 1 Score: 833.6 bits (2152), Expect = 1.1e-237
Identity = 437/597 (73.20%), Postives = 465/597 (77.89%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKEKGLFQFLNLRLCTSQFSASSS-IVECEKATTEDFNGTH---- 60
           MGFLHVCHFA   G+     +FQFL+LR+C S+F ASSS I+ECEK TTEDF  TH    
Sbjct: 1   MGFLHVCHFATNSGK-----IFQFLSLRVCVSRFFASSSCIIECEKGTTEDFCSTHVSYV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LELLKLCAKRRLFLQGKACHARILLMGLQAETLTSNILINMYSKCGSVDVARQVFDEMPS 120

Query: 121 ---------------------------------AAMDLNVFVATALLDVYAKCGLMNDAA 180
                                            AAM+LNVFVATALLDVYAKCGLMNDAA
Sbjct: 121 RSLVSWNTMIGSLTQNAKCALSECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAA 180

Query: 181 CVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGLA 240
            VFESM ERSVVTWSSMAAGYVQN +YEEALALF KA ETGLK D+FLMSSVICACAGLA
Sbjct: 181 HVFESMSERSVVTWSSMAAGYVQNAMYEEALALFRKAWETGLKHDQFLMSSVICACAGLA 240

Query: 241 AMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMIC 300
           AMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGI EAY VFRDVE RNVVLWNAMI 
Sbjct: 241 AMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMIS 300

Query: 301 GLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHLA 360
           GLSRHARSLEVMILFEKMQQ+GL+PNDVTFVSVLS CGHMGLVEKGQKYFDLMIKE+HLA
Sbjct: 301 GLSRHARSLEVMILFEKMQQIGLNPNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHLA 360

Query: 361 PNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAKN 420
           PNV HYSCMVD LSRAG+T +AY+LI KMPF ASASMWGSLLASCR+HGNLELAEVAAKN
Sbjct: 361 PNVFHYSCMVDALSRAGRTSDAYDLICKMPFRASASMWGSLLASCRTHGNLELAEVAAKN 420

Query: 421 LFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFMV 480
           LF+IEPQNAGNYLLLSNMYAANGKW+EVAKARKLLKESDVKKERGKSWIEIK++VHSFMV
Sbjct: 421 LFDIEPQNAGNYLLLSNMYAANGKWDEVAKARKLLKESDVKKERGKSWIEIKNEVHSFMV 480

Query: 481 GERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRKQELLRHHSEKLAFTTGL 500
           GERNHPKI+EIYSKLNEL+EEL KLGY+VET+HDLHQVGESRKQELLRHHSEKLAFT GL
Sbjct: 481 GERNHPKIAEIYSKLNELIEELQKLGYQVETQHDLHQVGESRKQELLRHHSEKLAFTMGL 540

BLAST of Tan0001608.1 vs. NCBI nr
Match: XP_022992701.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X2 [Cucurbita maxima])

HSP 1 Score: 833.2 bits (2151), Expect = 1.4e-237
Identity = 437/598 (73.08%), Postives = 465/598 (77.76%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKEKGLFQFLNLRLCTSQFSASSS-IVECEKATTEDFNGTH---- 60
           MGFLHVCHFA   G+     +FQFL+LR+C S+F ASSS I+ECEK TTEDF  TH    
Sbjct: 1   MGFLHVCHFATNSGK-----IFQFLSLRVCVSRFFASSSCIIECEKGTTEDFCSTHVSYV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LELLKLCAKRRLFLQVDVARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALSLLLQMQRA 120

Query: 121 ----------------------------------AAMDLNVFVATALLDVYAKCGLMNDA 180
                                             AAM+LNVFVATALLDVYAKCGLMNDA
Sbjct: 121 GTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDA 180

Query: 181 ACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGL 240
           A VFESM ERSVVTWSSMAAGYVQN +YEEALALF KA ETGLK D+FLMSSVICACAGL
Sbjct: 181 AHVFESMSERSVVTWSSMAAGYVQNAMYEEALALFRKAWETGLKHDQFLMSSVICACAGL 240

Query: 241 AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMI 300
           AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGI EAY VFRDVE RNVVLWNAMI
Sbjct: 241 AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMI 300

Query: 301 CGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHL 360
            GLSRHARSLEVMILFEKMQQ+GL+PNDVTFVSVLS CGHMGLVEKGQKYFDLMIKE+HL
Sbjct: 301 SGLSRHARSLEVMILFEKMQQIGLNPNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHL 360

Query: 361 APNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAK 420
           APNV HYSCMVD LSRAG+T +AY+LI KMPF ASASMWGSLLASCR+HGNLELAEVAAK
Sbjct: 361 APNVFHYSCMVDALSRAGRTSDAYDLICKMPFRASASMWGSLLASCRTHGNLELAEVAAK 420

Query: 421 NLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFM 480
           NLF+IEPQNAGNYLLLSNMYAANGKW+EVAKARKLLKESDVKKERGKSWIEIK++VHSFM
Sbjct: 421 NLFDIEPQNAGNYLLLSNMYAANGKWDEVAKARKLLKESDVKKERGKSWIEIKNEVHSFM 480

Query: 481 VGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRKQELLRHHSEKLAFTTG 500
           VGERNHPKI+EIYSKLNEL+EEL KLGY+VET+HDLHQVGESRKQELLRHHSEKLAFT G
Sbjct: 481 VGERNHPKIAEIYSKLNELIEELQKLGYQVETQHDLHQVGESRKQELLRHHSEKLAFTMG 540

BLAST of Tan0001608.1 vs. NCBI nr
Match: XP_004140992.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Cucumis sativus] >KAE8646637.1 hypothetical protein Csa_005652 [Cucumis sativus])

HSP 1 Score: 832.0 bits (2148), Expect = 3.1e-237
Identity = 442/637 (69.39%), Postives = 466/637 (73.16%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKEKG----LFQFLNLRLCTSQF----SASSSIVECEKATTEDFN 60
           MGFLHVCHFA+  GRY+EKG    +FQFL+LR+CT+QF    S+SS IVECEK TT+DFN
Sbjct: 1   MGFLHVCHFASNSGRYREKGKGKRIFQFLSLRVCTTQFFASLSSSSCIVECEKPTTKDFN 60

Query: 61  GTH--------------------------------------------------------- 120
            TH                                                         
Sbjct: 61  ATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQ 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCA 180

Query: 181 -------------AAMDLNVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAG 240
                        AAMDLNVFVATALLDVYAKCGLM DA CVFESMP+RSVVTWSSMAAG
Sbjct: 181 LSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAG 240

Query: 241 YVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSN 300
           YVQNE+YE+ALALF KA ETGLK D+FLMSSVICACAGLAAMIEG Q+NALLSKSGFCSN
Sbjct: 241 YVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSN 300

Query: 301 IFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQ 360
           IFVASSLIDMYAKCGGI E+Y VFRDVE RNVVLWNAMI GLSRHARSLEVMILFEKMQQ
Sbjct: 301 IFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQ 360

Query: 361 MGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTF 420
           MGLSPNDVTFVSVLS CGHMGLV KGQKYFDLM KEHHLAPNV HYSCMVD LSRAGQ F
Sbjct: 361 MGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIF 420

Query: 421 EAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYA 480
           EAY+LISK+PFNASASMWGSLLASCR+HGNLELAEVAAK LF+IEP N+GNYLLLSNMYA
Sbjct: 421 EAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYA 480

Query: 481 ANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELME 500
           ANGKW+EVAK RKLLKESDVKKERGKSWIEIKDKVH FMVGERNHPKI EIYSKLNE+M+
Sbjct: 481 ANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMD 540

BLAST of Tan0001608.1 vs. NCBI nr
Match: XP_008456610.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g04780 [Cucumis melo])

HSP 1 Score: 828.2 bits (2138), Expect = 4.5e-236
Identity = 443/641 (69.11%), Postives = 467/641 (72.85%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKE--------KGLFQFLNLRLCTSQFSASSS----IVECEKATT 60
           MGFLHVCHFA+  GRY+E        KG+FQFL+LRLCT+QF ASSS    IVECEK T+
Sbjct: 1   MGFLHVCHFASNSGRYREKGKGKGKGKGIFQFLSLRLCTTQFFASSSPSSCIVECEKPTS 60

Query: 61  EDFNGTH----------------------------------------------------- 120
           +DFN TH                                                     
Sbjct: 61  KDFNATHVSYVHEILKLCAKRKLFLQGKACHAQILLMGLKTDLLTSNILINTYSKCGSVD 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SARQVFDEMPSRSLVSWNTMIGSLTQNGQENEALGLLLQMQREGTPFSEFTISSVLCACA 180

Query: 181 -----------------AAMDLNVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSS 240
                            AAMDLNVFVATALLDVYAKCGLM DA  VFESMP+RSVVTWSS
Sbjct: 181 AKCALSECQLLHAFVIKAAMDLNVFVATALLDVYAKCGLMKDAVSVFESMPDRSVVTWSS 240

Query: 241 MAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSG 300
           MAAGYVQNE+YEEALALF KA ETGLK D+FLMSSVICACAGLAAMIEG QVNALLSKSG
Sbjct: 241 MAAGYVQNEMYEEALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSG 300

Query: 301 FCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFE 360
           FCSNIFVASSLIDMYAKCGGI E+Y VF+DVE RNVVLWNAMI GLSRHARSLEVMILFE
Sbjct: 301 FCSNIFVASSLIDMYAKCGGIEESYKVFQDVERRNVVLWNAMISGLSRHARSLEVMILFE 360

Query: 361 KMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRA 420
           KMQQMGLSPNDVTFVSVLS CGHMGLV+KGQKYFDLMIKEHHLAPNV+HYSCMVD LSRA
Sbjct: 361 KMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMIKEHHLAPNVIHYSCMVDTLSRA 420

Query: 421 GQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLS 480
           GQTFEAY+LISKMPFNASASMWGSLLASCR+HGNLELAE AAK LF+IEP N+GNYLLLS
Sbjct: 421 GQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEFAAKKLFDIEPHNSGNYLLLS 480

Query: 481 NMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLN 500
           NMYAANGKW+EVAK RKLLKESDVKKERGKSWIEIKDKVH FMVGERNHPKI EIYSKLN
Sbjct: 481 NMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLN 540

BLAST of Tan0001608.1 vs. NCBI nr
Match: KAG6578825.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 823.9 bits (2127), Expect = 8.4e-235
Identity = 433/598 (72.41%), Postives = 461/598 (77.09%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKEKGLFQFLNLRLCTSQFSASSS-IVECEKATTEDFNGTH---- 60
           MGFLHVCHFA   G+     +FQFL+LR+C S+F ASSS I+ECEK TTEDF  TH    
Sbjct: 2   MGFLHVCHFATNSGK-----IFQFLSLRVCISRFFASSSCIIECEKGTTEDFCSTHVSYV 61

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 62  LELLKLCAKRRLFLQVDVARQVFDEMPSRSLVSWSTMIGSLTQNGEENEALGLLLQMQRE 121

Query: 121 ----------------------------------AAMDLNVFVATALLDVYAKCGLMNDA 180
                                             AAM+LNVFVATALLDVYAKCGLMNDA
Sbjct: 122 GTPFSEFTISSVLCACAAKCALSECQLLHAFAVKAAMNLNVFVATALLDVYAKCGLMNDA 181

Query: 181 ACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGL 240
           A VFESM ERSVVTWSSMAAGYVQN +YEEALALF KA ETGLK D+FLMSSVICACAGL
Sbjct: 182 ANVFESMSERSVVTWSSMAAGYVQNAMYEEALALFRKAWETGLKHDQFLMSSVICACAGL 241

Query: 241 AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMI 300
           AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGI EAY VFRDVE RNVVLWNAMI
Sbjct: 242 AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMI 301

Query: 301 CGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHL 360
            GLSRHARSLEVMILFEKMQQ+GL+PNDVTFVSVLS CGHMGLVEKGQKYFDLMIK++HL
Sbjct: 302 SGLSRHARSLEVMILFEKMQQIGLNPNDVTFVSVLSACGHMGLVEKGQKYFDLMIKDYHL 361

Query: 361 APNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAK 420
            PNV HYSCMVD LSRAG T +AY+LI KMPF ASASMWGSLLASCR+HGNLELAEVAAK
Sbjct: 362 TPNVFHYSCMVDALSRAGWTSDAYDLICKMPFRASASMWGSLLASCRTHGNLELAEVAAK 421

Query: 421 NLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFM 480
           NLF+IEP NAGNYLLLSNMYAANGKW+EVAKARKLLKESDVKKERGKSWIEIK++VHSFM
Sbjct: 422 NLFDIEPHNAGNYLLLSNMYAANGKWDEVAKARKLLKESDVKKERGKSWIEIKNEVHSFM 481

Query: 481 VGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRKQELLRHHSEKLAFTTG 500
           VGERNHPKI+EIYSKLNEL+EEL KLGY+VET+HDLHQV ESRKQELLRHHSEKLAFT G
Sbjct: 482 VGERNHPKIAEIYSKLNELIEELQKLGYQVETQHDLHQVEESRKQELLRHHSEKLAFTMG 541

BLAST of Tan0001608.1 vs. ExPASy TrEMBL
Match: A0A6J1JQM7 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488964 PE=3 SV=1)

HSP 1 Score: 833.6 bits (2152), Expect = 5.2e-238
Identity = 437/597 (73.20%), Postives = 465/597 (77.89%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKEKGLFQFLNLRLCTSQFSASSS-IVECEKATTEDFNGTH---- 60
           MGFLHVCHFA   G+     +FQFL+LR+C S+F ASSS I+ECEK TTEDF  TH    
Sbjct: 1   MGFLHVCHFATNSGK-----IFQFLSLRVCVSRFFASSSCIIECEKGTTEDFCSTHVSYV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LELLKLCAKRRLFLQGKACHARILLMGLQAETLTSNILINMYSKCGSVDVARQVFDEMPS 120

Query: 121 ---------------------------------AAMDLNVFVATALLDVYAKCGLMNDAA 180
                                            AAM+LNVFVATALLDVYAKCGLMNDAA
Sbjct: 121 RSLVSWNTMIGSLTQNAKCALSECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAA 180

Query: 181 CVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGLA 240
            VFESM ERSVVTWSSMAAGYVQN +YEEALALF KA ETGLK D+FLMSSVICACAGLA
Sbjct: 181 HVFESMSERSVVTWSSMAAGYVQNAMYEEALALFRKAWETGLKHDQFLMSSVICACAGLA 240

Query: 241 AMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMIC 300
           AMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGI EAY VFRDVE RNVVLWNAMI 
Sbjct: 241 AMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMIS 300

Query: 301 GLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHLA 360
           GLSRHARSLEVMILFEKMQQ+GL+PNDVTFVSVLS CGHMGLVEKGQKYFDLMIKE+HLA
Sbjct: 301 GLSRHARSLEVMILFEKMQQIGLNPNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHLA 360

Query: 361 PNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAKN 420
           PNV HYSCMVD LSRAG+T +AY+LI KMPF ASASMWGSLLASCR+HGNLELAEVAAKN
Sbjct: 361 PNVFHYSCMVDALSRAGRTSDAYDLICKMPFRASASMWGSLLASCRTHGNLELAEVAAKN 420

Query: 421 LFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFMV 480
           LF+IEPQNAGNYLLLSNMYAANGKW+EVAKARKLLKESDVKKERGKSWIEIK++VHSFMV
Sbjct: 421 LFDIEPQNAGNYLLLSNMYAANGKWDEVAKARKLLKESDVKKERGKSWIEIKNEVHSFMV 480

Query: 481 GERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRKQELLRHHSEKLAFTTGL 500
           GERNHPKI+EIYSKLNEL+EEL KLGY+VET+HDLHQVGESRKQELLRHHSEKLAFT GL
Sbjct: 481 GERNHPKIAEIYSKLNELIEELQKLGYQVETQHDLHQVGESRKQELLRHHSEKLAFTMGL 540

BLAST of Tan0001608.1 vs. ExPASy TrEMBL
Match: A0A6J1JUA1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488964 PE=3 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 6.7e-238
Identity = 437/598 (73.08%), Postives = 465/598 (77.76%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKEKGLFQFLNLRLCTSQFSASSS-IVECEKATTEDFNGTH---- 60
           MGFLHVCHFA   G+     +FQFL+LR+C S+F ASSS I+ECEK TTEDF  TH    
Sbjct: 1   MGFLHVCHFATNSGK-----IFQFLSLRVCVSRFFASSSCIIECEKGTTEDFCSTHVSYV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LELLKLCAKRRLFLQVDVARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALSLLLQMQRA 120

Query: 121 ----------------------------------AAMDLNVFVATALLDVYAKCGLMNDA 180
                                             AAM+LNVFVATALLDVYAKCGLMNDA
Sbjct: 121 GTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDA 180

Query: 181 ACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGL 240
           A VFESM ERSVVTWSSMAAGYVQN +YEEALALF KA ETGLK D+FLMSSVICACAGL
Sbjct: 181 AHVFESMSERSVVTWSSMAAGYVQNAMYEEALALFRKAWETGLKHDQFLMSSVICACAGL 240

Query: 241 AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMI 300
           AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGI EAY VFRDVE RNVVLWNAMI
Sbjct: 241 AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMI 300

Query: 301 CGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHL 360
            GLSRHARSLEVMILFEKMQQ+GL+PNDVTFVSVLS CGHMGLVEKGQKYFDLMIKE+HL
Sbjct: 301 SGLSRHARSLEVMILFEKMQQIGLNPNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHL 360

Query: 361 APNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAK 420
           APNV HYSCMVD LSRAG+T +AY+LI KMPF ASASMWGSLLASCR+HGNLELAEVAAK
Sbjct: 361 APNVFHYSCMVDALSRAGRTSDAYDLICKMPFRASASMWGSLLASCRTHGNLELAEVAAK 420

Query: 421 NLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFM 480
           NLF+IEPQNAGNYLLLSNMYAANGKW+EVAKARKLLKESDVKKERGKSWIEIK++VHSFM
Sbjct: 421 NLFDIEPQNAGNYLLLSNMYAANGKWDEVAKARKLLKESDVKKERGKSWIEIKNEVHSFM 480

Query: 481 VGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRKQELLRHHSEKLAFTTG 500
           VGERNHPKI+EIYSKLNEL+EEL KLGY+VET+HDLHQVGESRKQELLRHHSEKLAFT G
Sbjct: 481 VGERNHPKIAEIYSKLNELIEELQKLGYQVETQHDLHQVGESRKQELLRHHSEKLAFTMG 540

BLAST of Tan0001608.1 vs. ExPASy TrEMBL
Match: A0A1S3C4B6 (pentatricopeptide repeat-containing protein At5g04780 OS=Cucumis melo OX=3656 GN=LOC103496519 PE=3 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 2.2e-236
Identity = 443/641 (69.11%), Postives = 467/641 (72.85%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKE--------KGLFQFLNLRLCTSQFSASSS----IVECEKATT 60
           MGFLHVCHFA+  GRY+E        KG+FQFL+LRLCT+QF ASSS    IVECEK T+
Sbjct: 1   MGFLHVCHFASNSGRYREKGKGKGKGKGIFQFLSLRLCTTQFFASSSPSSCIVECEKPTS 60

Query: 61  EDFNGTH----------------------------------------------------- 120
           +DFN TH                                                     
Sbjct: 61  KDFNATHVSYVHEILKLCAKRKLFLQGKACHAQILLMGLKTDLLTSNILINTYSKCGSVD 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SARQVFDEMPSRSLVSWNTMIGSLTQNGQENEALGLLLQMQREGTPFSEFTISSVLCACA 180

Query: 181 -----------------AAMDLNVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSS 240
                            AAMDLNVFVATALLDVYAKCGLM DA  VFESMP+RSVVTWSS
Sbjct: 181 AKCALSECQLLHAFVIKAAMDLNVFVATALLDVYAKCGLMKDAVSVFESMPDRSVVTWSS 240

Query: 241 MAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSG 300
           MAAGYVQNE+YEEALALF KA ETGLK D+FLMSSVICACAGLAAMIEG QVNALLSKSG
Sbjct: 241 MAAGYVQNEMYEEALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSG 300

Query: 301 FCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFE 360
           FCSNIFVASSLIDMYAKCGGI E+Y VF+DVE RNVVLWNAMI GLSRHARSLEVMILFE
Sbjct: 301 FCSNIFVASSLIDMYAKCGGIEESYKVFQDVERRNVVLWNAMISGLSRHARSLEVMILFE 360

Query: 361 KMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRA 420
           KMQQMGLSPNDVTFVSVLS CGHMGLV+KGQKYFDLMIKEHHLAPNV+HYSCMVD LSRA
Sbjct: 361 KMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMIKEHHLAPNVIHYSCMVDTLSRA 420

Query: 421 GQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLS 480
           GQTFEAY+LISKMPFNASASMWGSLLASCR+HGNLELAE AAK LF+IEP N+GNYLLLS
Sbjct: 421 GQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEFAAKKLFDIEPHNSGNYLLLS 480

Query: 481 NMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLN 500
           NMYAANGKW+EVAK RKLLKESDVKKERGKSWIEIKDKVH FMVGERNHPKI EIYSKLN
Sbjct: 481 NMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLN 540

BLAST of Tan0001608.1 vs. ExPASy TrEMBL
Match: A0A6J1FJ71 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111444755 PE=3 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 9.1e-235
Identity = 433/597 (72.53%), Postives = 461/597 (77.22%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKEKGLFQFLNLRLCTSQFSASSS-IVECEKATTEDFNGTH---- 60
           MGFLHVCHFA   G+     +FQFL+LR+C S+F ASSS I+ECEK TTEDF  TH    
Sbjct: 1   MGFLHVCHFATNSGK-----IFQFLSLRVCISRFFASSSCIIECEKGTTEDFCSTHVSYV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LELLKLCAKRRLFLQGKACHARILLMGLQAETSTSNILINMYAKCGSVDVARQVFDEMPS 120

Query: 121 ---------------------------------AAMDLNVFVATALLDVYAKCGLMNDAA 180
                                            AAM+LNVFVATALLDVYAKCGLMNDAA
Sbjct: 121 RSLVSWSTMIGSLTQNAKCALSECQLLHAFAVKAAMNLNVFVATALLDVYAKCGLMNDAA 180

Query: 181 CVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGLA 240
            VFESM ERSVVTWSSMAAGYVQN +YEEALALF KA ETGLK D+FLMSSVICACAGLA
Sbjct: 181 NVFESMSERSVVTWSSMAAGYVQNAMYEEALALFRKAWETGLKHDQFLMSSVICACAGLA 240

Query: 241 AMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMIC 300
           AMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGI EAY VFRDVE RNVVLWNAMI 
Sbjct: 241 AMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMIS 300

Query: 301 GLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHLA 360
           GLSRHARSLEVMILFEKMQQ+GL+PNDVTFVSVLS CGHMGLVEKGQKYFDLMIKE+HLA
Sbjct: 301 GLSRHARSLEVMILFEKMQQIGLNPNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHLA 360

Query: 361 PNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAKN 420
           PNV HYSCMVD LSRAG+T +AY LI KMPF ASAS+WGSLLASCR+HGNLELAEVAAKN
Sbjct: 361 PNVFHYSCMVDALSRAGRTSDAYVLICKMPFRASASIWGSLLASCRTHGNLELAEVAAKN 420

Query: 421 LFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFMV 480
           LF+IEP NAGNYLLLSNMYAANGKW+EVAKARKLLKESDVKKERGKSWIEIK++VH FMV
Sbjct: 421 LFDIEPHNAGNYLLLSNMYAANGKWDEVAKARKLLKESDVKKERGKSWIEIKNEVHLFMV 480

Query: 481 GERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRKQELLRHHSEKLAFTTGL 500
           GERNHPKI+EIYSKLNEL+EEL KLGY+VET+HDLHQV ESRKQELLRHHSEKLAFT GL
Sbjct: 481 GERNHPKIAEIYSKLNELIEELQKLGYQVETQHDLHQVEESRKQELLRHHSEKLAFTMGL 540

BLAST of Tan0001608.1 vs. ExPASy TrEMBL
Match: A0A6J1FED4 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444755 PE=3 SV=1)

HSP 1 Score: 822.4 bits (2123), Expect = 1.2e-234
Identity = 433/598 (72.41%), Postives = 461/598 (77.09%), Query Frame = 0

Query: 1   MGFLHVCHFAAKLGRYKEKGLFQFLNLRLCTSQFSASSS-IVECEKATTEDFNGTH---- 60
           MGFLHVCHFA   G+     +FQFL+LR+C S+F ASSS I+ECEK TTEDF  TH    
Sbjct: 1   MGFLHVCHFATNSGK-----IFQFLSLRVCISRFFASSSCIIECEKGTTEDFCSTHVSYV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LELLKLCAKRRLFLQVDVARQVFDEMPSRSLVSWSTMIGSLTQNGEENEALGLFLQMQRE 120

Query: 121 ----------------------------------AAMDLNVFVATALLDVYAKCGLMNDA 180
                                             AAM+LNVFVATALLDVYAKCGLMNDA
Sbjct: 121 GTPFSEFTISSVLCACAAKCALSECQLLHAFAVKAAMNLNVFVATALLDVYAKCGLMNDA 180

Query: 181 ACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLKQDEFLMSSVICACAGL 240
           A VFESM ERSVVTWSSMAAGYVQN +YEEALALF KA ETGLK D+FLMSSVICACAGL
Sbjct: 181 ANVFESMSERSVVTWSSMAAGYVQNAMYEEALALFRKAWETGLKHDQFLMSSVICACAGL 240

Query: 241 AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNVFRDVEVRNVVLWNAMI 300
           AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGI EAY VFRDVE RNVVLWNAMI
Sbjct: 241 AAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMI 300

Query: 301 CGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLVEKGQKYFDLMIKEHHL 360
            GLSRHARSLEVMILFEKMQQ+GL+PNDVTFVSVLS CGHMGLVEKGQKYFDLMIKE+HL
Sbjct: 301 SGLSRHARSLEVMILFEKMQQIGLNPNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHL 360

Query: 361 APNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLASCRSHGNLELAEVAAK 420
           APNV HYSCMVD LSRAG+T +AY LI KMPF ASAS+WGSLLASCR+HGNLELAEVAAK
Sbjct: 361 APNVFHYSCMVDALSRAGRTSDAYVLICKMPFRASASIWGSLLASCRTHGNLELAEVAAK 420

Query: 421 NLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKERGKSWIEIKDKVHSFM 480
           NLF+IEP NAGNYLLLSNMYAANGKW+EVAKARKLLKESDVKKERGKSWIEIK++VH FM
Sbjct: 421 NLFDIEPHNAGNYLLLSNMYAANGKWDEVAKARKLLKESDVKKERGKSWIEIKNEVHLFM 480

Query: 481 VGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRKQELLRHHSEKLAFTTG 500
           VGERNHPKI+EIYSKLNEL+EEL KLGY+VET+HDLHQV ESRKQELLRHHSEKLAFT G
Sbjct: 481 VGERNHPKIAEIYSKLNELIEELQKLGYQVETQHDLHQVEESRKQELLRHHSEKLAFTMG 540

BLAST of Tan0001608.1 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 584.3 bits (1505), Expect = 1.0e-166
Identity = 290/494 (58.70%), Postives = 374/494 (75.71%), Query Frame = 0

Query: 15  RYKEKGLFQFLNLR---LCTSQFSASSSI----VECEKATTEDFN--GTHAAMDLNVFVA 74
           R + + L  FL +R      S+F+ SS +    V C+    +  +       +DLN++V 
Sbjct: 141 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200

Query: 75  TALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKARETGLK 134
           TALLD+YAKCG++ DA  VFESM ++S VTWSSM AGYVQN+ YEEAL L+ +A+   L+
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260

Query: 135 QDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIGEAYNV 194
           Q++F +SSVICAC+ LAA+IEG Q++A++ KSGF SN+FVASS +DMYAKCG + E+Y +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320

Query: 195 FRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCGHMGLV 254
           F +V+ +N+ LWN +I G ++HAR  EVMILFEKMQQ G+ PN+VTF S+LSVCGH GLV
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380

Query: 255 EKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMWGSLLA 314
           E+G+++F LM   + L+PNV+HYSCMVDIL RAG   EAY LI  +PF+ +AS+WGSLLA
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440

Query: 315 SCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKESDVKKE 374
           SCR + NLELAEVAA+ LFE+EP+NAGN++LLSN+YAAN +W E+AK+RKLL++ DVKK 
Sbjct: 441 SCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKV 500

Query: 375 RGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQVGESRK 434
           RGKSWI+IKDKVH+F VGE  HP+I EI S L+ L+ +  K GYK   EH+LH V   +K
Sbjct: 501 RGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKK 560

Query: 435 QELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDVIVRDTNR 494
           +ELL  HSEKLA   GL+ LP ++P+RIMKNLRIC DCH FMK AS   +R +IVRD NR
Sbjct: 561 EELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 620

Query: 495 FHHFKDGHCSCGDF 500
           FHHF DGHCSCGDF
Sbjct: 621 FHHFSDGHCSCGDF 634

BLAST of Tan0001608.1 vs. TAIR 10
Match: AT5G52630.1 (mitochondrial RNAediting factor 1 )

HSP 1 Score: 418.3 bits (1074), Expect = 9.9e-117
Identity = 208/441 (47.17%), Postives = 296/441 (67.12%), Query Frame = 0

Query: 59  DLNVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCK 118
           D +VFV ++L+D+YAKCG +  A  +F+ MP+R+VVTWS M  GY Q    EEAL LF +
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207

Query: 119 ARETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGG 178
           A    L  +++  SSVI  CA    +  G Q++ L  KS F S+ FV SSL+ +Y+KCG 
Sbjct: 208 ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGV 267

Query: 179 IGEAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSV 238
              AY VF +V V+N+ +WNAM+   ++H+ + +V+ LF++M+  G+ PN +TF++VL+ 
Sbjct: 268 PEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327

Query: 239 CGHMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASAS 298
           C H GLV++G+ YFD M KE  + P   HY+ +VD+L RAG+  EA  +I+ MP + + S
Sbjct: 328 CSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 387

Query: 299 MWGSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLK 358
           +WG+LL SC  H N ELA  AA  +FE+ P ++G ++ LSN YAA+G++ + AKARKLL+
Sbjct: 388 VWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 447

Query: 359 ESDVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLH 418
           +   KKE G SW+E ++KVH+F  GER H K  EIY KL EL EE+ K GY  +T + L 
Sbjct: 448 DRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLR 507

Query: 419 QVGESRKQELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDV 478
           +V    K + +R+HSE+LA   GL+  P + PIR+MKNLR+CGDCH+ +K  S   +R +
Sbjct: 508 EVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVI 567

Query: 479 IVRDTNRFHHFKDGHCSCGDF 500
           IVRD NRFH F+DG CSC D+
Sbjct: 568 IVRDNNRFHRFEDGKCSCNDY 587

BLAST of Tan0001608.1 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 405.6 bits (1041), Expect = 6.7e-113
Identity = 194/439 (44.19%), Postives = 288/439 (65.60%), Query Frame = 0

Query: 61  NVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKAR 120
           NV     ++  YA+CG +++A  +F+ MP+R  V+W++M AGY Q+    EAL LF +  
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401

Query: 121 ETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIG 180
             G + +    SS +  CA + A+  G Q++  L K G+ +  FV ++L+ MY KCG I 
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461

Query: 181 EAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCG 240
           EA ++F+++  +++V WN MI G SRH      +  FE M++ GL P+D T V+VLS C 
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521

Query: 241 HMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMW 300
           H GLV+KG++YF  M +++ + PN  HY+CMVD+L RAG   +A+NL+  MPF   A++W
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 581

Query: 301 GSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKES 360
           G+LL + R HGN ELAE AA  +F +EP+N+G Y+LLSN+YA++G+W +V K R  +++ 
Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641

Query: 361 DVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQV 420
            VKK  G SWIEI++K H+F VG+  HP+  EI++ L EL   + K GY  +T   LH V
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 701

Query: 421 GESRKQELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDVIV 480
            E  K+ ++R+HSE+LA   G++ +    PIR++KNLR+C DCH+ +K  +    R +I+
Sbjct: 702 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIIL 761

Query: 481 RDTNRFHHFKDGHCSCGDF 500
           RD NRFHHFKDG CSCGD+
Sbjct: 762 RDNNRFHHFKDGSCSCGDY 780

BLAST of Tan0001608.1 vs. TAIR 10
Match: AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 399.8 bits (1026), Expect = 3.7e-111
Identity = 187/439 (42.60%), Postives = 289/439 (65.83%), Query Frame = 0

Query: 61  NVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCKAR 120
           +++V +AL+D+Y KC  ++ A  VF+ M +++VV+W++M  GY Q    EEA+ +F   +
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363

Query: 121 ETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGGIG 180
            +G+  D + +   I ACA ++++ EG+Q +     SG    + V++SL+ +Y KCG I 
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423

Query: 181 EAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSVCG 240
           ++  +F ++ VR+ V W AM+   ++  R++E + LF+KM Q GL P+ VT   V+S C 
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483

Query: 241 HMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASASMW 300
             GLVEKGQ+YF LM  E+ + P++ HYSCM+D+ SR+G+  EA   I+ MPF   A  W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543

Query: 301 GSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLKES 360
            +LL++CR+ GNLE+ + AA++L E++P +   Y LLS++YA+ GKW+ VA+ R+ ++E 
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603

Query: 361 DVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLHQV 420
           +VKKE G+SWI+ K K+HSF   + + P + +IY+KL EL  ++   GYK +T    H V
Sbjct: 604 NVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDV 663

Query: 421 GESRKQELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDVIV 480
            E+ K ++L +HSE+LA   GL+F+P   PIR+ KNLR+C DCH+  K  S    R+++V
Sbjct: 664 EEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILV 723

Query: 481 RDTNRFHHFKDGHCSCGDF 500
           RD  RFH FKDG CSCGDF
Sbjct: 724 RDAVRFHRFKDGTCSCGDF 742

BLAST of Tan0001608.1 vs. TAIR 10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 398.3 bits (1022), Expect = 1.1e-110
Identity = 191/441 (43.31%), Postives = 290/441 (65.76%), Query Frame = 0

Query: 59  DLNVFVATALLDVYAKCGLMNDAACVFESMPERSVVTWSSMAAGYVQNELYEEALALFCK 118
           DL+++V++ +LD+Y KCG M+ A   F+S+P    V W++M +G ++N   E A  +F +
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608

Query: 119 ARETGLKQDEFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVASSLIDMYAKCGG 178
            R  G+  DEF ++++  A + L A+ +G Q++A   K    ++ FV +SL+DMYAKCG 
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668

Query: 179 IGEAYNVFRDVEVRNVVLWNAMICGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSV 238
           I +AY +F+ +E+ N+  WNAM+ GL++H    E + LF++M+ +G+ P+ VTF+ VLS 
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728

Query: 239 CGHMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDILSRAGQTFEAYNLISKMPFNASAS 298
           C H GLV +  K+   M  ++ + P + HYSC+ D L RAG   +A NLI  M   ASAS
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788

Query: 299 MWGSLLASCRSHGNLELAEVAAKNLFEIEPQNAGNYLLLSNMYAANGKWNEVAKARKLLK 358
           M+ +LLA+CR  G+ E  +  A  L E+EP ++  Y+LLSNMYAA  KW+E+  AR ++K
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848

Query: 359 ESDVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELMEELPKLGYKVETEHDLH 418
              VKK+ G SWIE+K+K+H F+V +R++ +   IY K+ +++ ++ + GY  ET+  L 
Sbjct: 849 GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908

Query: 419 QVGESRKQELLRHHSEKLAFTTGLLFLPPNAPIRIMKNLRICGDCHSFMKLASGFVQRDV 478
            V E  K+  L +HSEKLA   GLL  PP+ PIR++KNLR+CGDCH+ MK  +    R++
Sbjct: 909 DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREI 968

Query: 479 IVRDTNRFHHFKDGHCSCGDF 500
           ++RD NRFH FKDG CSCGD+
Sbjct: 969 VLRDANRFHRFKDGICSCGDY 989

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LZ191.5e-16558.70Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop... [more]
Q9LTF41.4e-11547.17Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th... [more]
Q9SY029.4e-11244.19Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
Q9CAA85.1e-11042.60Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th... [more]
Q9SMZ21.5e-10943.31Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_022992702.11.1e-23773.20pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X3 ... [more]
XP_022992701.11.4e-23773.08pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X2 ... [more]
XP_004140992.13.1e-23769.39pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Cucumis sa... [more]
XP_008456610.14.5e-23669.11PREDICTED: pentatricopeptide repeat-containing protein At5g04780 [Cucumis melo][more]
KAG6578825.18.4e-23572.41Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
A0A6J1JQM75.2e-23873.20pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X3 ... [more]
A0A6J1JUA16.7e-23873.08pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X2 ... [more]
A0A1S3C4B62.2e-23669.11pentatricopeptide repeat-containing protein At5g04780 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1FJ719.1e-23572.53pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X3 ... [more]
A0A6J1FED41.2e-23472.41pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X2 ... [more]
Match NameE-valueIdentityDescription
AT5G04780.11.0e-16658.70Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G52630.19.9e-11747.17mitochondrial RNAediting factor 1 [more]
AT4G02750.16.7e-11344.19Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G68930.13.7e-11142.60pentatricopeptide (PPR) repeat-containing protein [more]
AT4G33170.11.1e-11043.31Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 247..407
e-value: 1.5E-12
score: 49.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 47..147
e-value: 1.0E-18
score: 69.3
coord: 148..246
e-value: 1.8E-21
score: 78.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 93..350
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 195..228
e-value: 1.5E-4
score: 19.7
coord: 66..93
e-value: 0.0029
score: 15.7
coord: 94..127
e-value: 3.4E-4
score: 18.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 192..239
e-value: 7.3E-11
score: 42.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 66..92
e-value: 0.005
score: 17.0
coord: 267..291
e-value: 0.067
score: 13.5
coord: 94..122
e-value: 8.6E-5
score: 22.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 92..126
score: 9.722731
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 193..227
score: 11.136739
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 367..490
e-value: 3.4E-38
score: 130.4
NoneNo IPR availablePANTHERPTHR47926:SF272BNAA03G01460D PROTEINcoord: 28..485
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 28..485

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Tan0001608Tan0001608gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0001608.1-exonTan0001608.1-exon-LG11:8032878..8033042exon
Tan0001608.1-exonTan0001608.1-exon-LG11:8033433..8034766exon
Tan0001608.1-exonTan0001608.1-exon-LG11:8035651..8035684exon
Tan0001608.1-exonTan0001608.1-exon-LG11:8035782..8035834exon
Tan0001608.1-exonTan0001608.1-exon-LG11:8036009..8036156exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0001608.1-cdsTan0001608.1-cds-LG11:8032878..8033042CDS
Tan0001608.1-cdsTan0001608.1-cds-LG11:8033433..8034766CDS
Tan0001608.1-cdsTan0001608.1-cds-LG11:8035651..8035684CDS
Tan0001608.1-cdsTan0001608.1-cds-LG11:8035782..8035834CDS
Tan0001608.1-cdsTan0001608.1-cds-LG11:8036009..8036156CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Tan0001608.1Tan0001608.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding