Spg034854.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg034854.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	dof zinc finger protein DOF3.4-like
Location	scaffold3: 25883657 .. 25884274 (-)
Sequence length	441
RNA-Seq Expression	Spg034854.1
Synteny	Spg034854.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCCAATGCCGGCGACCACCGCAAGACCGCCACCAAGCCCCTCGGCTCTGGTGGGGCCTACCCTCCACCGGAGCAAGAGCACCTTCCTTGCCCACGATGTGATTCTACTAATACCAAGTTCTGTTACTACAATAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGTCGCTGTTACTGGACCCACAGTGGGACCCTCCGGGACATTCCCGTTGGCGGTGGAAGCAGGAAGAATGCCAAGCGCTCTCGTACTTGCATTCCGACGGCGGTTGTTTCTTCTTCGTCTGGGTCGTTGACTAATTCTGTTTCTCGGTTGGATCATCATCTATTGCCAGCGACTCCGGTGCTGGTGCCGCTCGTCGGTGGCCATGGTGGGGGAGTTCAGTTCTGCGGCGGTGGGGGGGAGTTGAAGGCCGGTGGGAATATGTGTGGGGCAATTCAGGAATATAAAAAATTAATTCAAAATTTTTGCCATATTTACAAATATTTTTAAAAATTGCTATATTTGCCATTATTTACCCTCATGTTGCCACCCATTACAATTATCCTAAATTTTACTATTTTTGCAAATACTTTAACAGAAATTAGGGTAGATGGACTCCTTTAA

mRNA sequence

ATGCCTTCCAATGCCGGCGACCACCGCAAGACCGCCACCAAGCCCCTCGGCTCTGGTGGGGCCTACCCTCCACCGGAGCAAGAGCACCTTCCTTGCCCACGATGTGATTCTACTAATACCAAGTTCTGTTACTACAATAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGTCGCTGTTACTGGACCCACAGTGGGACCCTCCGGGACATTCCCGTTGGCGGTGGAAGCAGGAAGAATGCCAAGCGCTCTCGTACTTGCATTCCGACGGCGGTTGTTTCTTCTTCGTCTGGGTCGTTGACTAATTCTGTTTCTCGGTTGGATCATCATCTATTGCCAGCGACTCCGGTGCTGGTGCCGCTCGTCGGTGGCCATGGTGGGGGAGTTCAGTTCTGCGGCGGTGGGGGGGAGTTGAAGGCCGGTGGGAATATGTAA

Coding sequence (CDS)

ATGCCTTCCAATGCCGGCGACCACCGCAAGACCGCCACCAAGCCCCTCGGCTCTGGTGGGGCCTACCCTCCACCGGAGCAAGAGCACCTTCCTTGCCCACGATGTGATTCTACTAATACCAAGTTCTGTTACTACAATAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGTCGCTGTTACTGGACCCACAGTGGGACCCTCCGGGACATTCCCGTTGGCGGTGGAAGCAGGAAGAATGCCAAGCGCTCTCGTACTTGCATTCCGACGGCGGTTGTTTCTTCTTCGTCTGGGTCGTTGACTAATTCTGTTTCTCGGTTGGATCATCATCTATTGCCAGCGACTCCGGTGCTGGTGCCGCTCGTCGGTGGCCATGGTGGGGGAGTTCAGTTCTGCGGCGGTGGGGGGGAGTTGAAGGCCGGTGGGAATATGTAA

Protein sequence

MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCGGGGELKAGGNM

Homology

[Close]

BLAST of Spg034854.1 vs. NCBI nr
Match: XP_022963128.1 (dof zinc finger protein DOF3.4-like [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 5.9e-68
Identity = 132/153 (86.27%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGLCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP------TAVVSSSSGSLTNSVSRLDHHLL 120
           R YWTH GTLRDIPVGGGSRKNAKRSRTCIP      T+VVSSSSGSLTNSVS+LDHH L
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAAATSVVSSSSGSLTNSVSQLDHHSL 120

Query: 121 PATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM 147
           PATP LVPLVGGH GG+QF  GGGGELKAGGNM
Sbjct: 121 PATPFLVPLVGGHSGGLQFGGGGGGELKAGGNM 153

[Close]

BLAST of Spg034854.1 vs. NCBI nr
Match: KAG6595058.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027075.1 Dof zinc finger protein DOF3.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.3 bits (682), Expect = 7.7e-68
Identity = 132/154 (85.71%), Postives = 136/154 (88.31%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGLCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP-------TAVVSSSSGSLTNSVSRLDHHL 120
           R YWTH GTLRDIPVGGGSRKNAKRSRTCIP       T+VVSSSSGSLTNSVS+LDHH 
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAAAATSVVSSSSGSLTNSVSQLDHHS 120

Query: 121 LPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM 147
           LPATP LVPLVGGH GG+QF  GGGGELKAGGNM
Sbjct: 121 LPATPFLVPLVGGHSGGLQFGGGGGGELKAGGNM 154

[Close]

BLAST of Spg034854.1 vs. NCBI nr
Match: XP_023003604.1 (dof zinc finger protein DOF3.4-like [Cucurbita maxima])

HSP 1 Score: 266.9 bits (681), Expect = 1.0e-67
Identity = 131/152 (86.18%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP-----TAVVSSSSGSLTNSVSRLDHHLLP 120
           R YWTH GTLRDIPVGGGSRKNAKRSRTCIP     T+VVSSSSGSLTNSVS+LDHH LP
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAATSVVSSSSGSLTNSVSQLDHHSLP 120

Query: 121 ATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM 147
           ATP LVPLVGGH GG+QF  GGGGELKAGGN+
Sbjct: 121 ATPFLVPLVGGHSGGLQFGGGGGGELKAGGNV 152

[Close]

BLAST of Spg034854.1 vs. NCBI nr
Match: XP_023518495.1 (dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.0 bits (676), Expect = 3.8e-67
Identity = 131/154 (85.06%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPS+A DH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAADHLKTATKPLASGGLCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP------TAVVSSSSGSLTNSVSRLDHHLL 120
           R YWTH GTLRDIPVGGGSRKNAKRSRTCIP      T+VVSSSSGSLTNSVS+LDHH L
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAAATSVVSSSSGSLTNSVSQLDHHSL 120

Query: 121 PATPVLVPLVGGHGGGVQF--CGGGGELKAGGNM 147
           PATP LVPLVGGH GG+QF   GGGGELKAGGNM
Sbjct: 121 PATPFLVPLVGGHSGGLQFGGGGGGGELKAGGNM 154

[Close]

BLAST of Spg034854.1 vs. NCBI nr
Match: XP_038883004.1 (dof zinc finger protein DOF3.4-like [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60
Identity = 118/139 (84.89%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGGAY-PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPS+AGDHRKTATKP GSGG+  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKTATKPFGSGGSVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP--TAVVSSSSGSLTNSVSRLDHHLLPAT 120
           CR YWTH GTLRDIPVGGGSRKNAKRSRTC+P   AVVSSSSGS TNSVSRLDHH LP T
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCMPASAAVVSSSSGSFTNSVSRLDHHSLPTT 120

Query: 121 PVLVPLVGGHGGGVQFCGG 137
           PVLVPL GG GG ++  GG
Sbjct: 121 PVLVPLGGGVGGDLKVGGG 139

[Close]

BLAST of Spg034854.1 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 6.8e-35
Identity = 75/121 (61.98%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 3   SNAGDHRKTATKPLGSGGAYP-PPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR 62
           S++G+ R+ A KP  +G   P   +QE LPCPRCDS+NTKFCYYNNYNFSQPRHFCK+CR
Sbjct: 4   SDSGEPRRIAMKP--NGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACR 63

Query: 63  CYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATPVLV 122
            YWTH GTLRD+PVGGG+RK+AKRSRTC      +SSS S++  VS  +   L  TPVL 
Sbjct: 64  RYWTHGGTLRDVPVGGGTRKSAKRSRTC-----SNSSSSSVSGVVSNSNGVPLQTTPVLF 117

[Close]

BLAST of Spg034854.1 vs. ExPASy Swiss-Prot
Match: Q9FGD6 (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.4e-34
Identity = 77/131 (58.78%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGG--AYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCK 60
           MPS   + R+    P G GG  A P  +QE L CPRC+STNTKFCYYNNYNFSQPRHFCK
Sbjct: 1   MPSEFSESRRVPKIPHGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCK 60

Query: 61  SCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATP 120
           SCR YWTH GTLRDIPVGG SRK++KRSRT          S + T SV    +  L ATP
Sbjct: 61  SCRRYWTHGGTLRDIPVGGVSRKSSKRSRT---------YSSAATTSVVGSRNFPLQATP 120

Query: 121 VLVPLVGGHGG 130
           VL P    +GG
Sbjct: 121 VLFPQSSSNGG 122

[Close]

BLAST of Spg034854.1 vs. ExPASy Swiss-Prot
Match: Q9SX97 (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.6e-29
Identity = 72/148 (48.65%), Postives = 90/148 (60.81%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGGAYPPPE-QEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPS     R T  +P  S  AYPPP   E LPCPRC+ST TKFCYYNNYN +QPR++CKS
Sbjct: 1   MPSEPNQTRPTRVQP--STAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKS 60

Query: 61  CRCYWTHSGTLRDIPVGGGSRK-NAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATP 120
           CR YWT  GTLRD+PVGGG+R+ ++KR R+   TA  SSSS S+  + ++       +  
Sbjct: 61  CRRYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQT 120

Query: 121 VLVPLVGGHGGGVQFCG---GGGELKAG 144
            +  L+ GHG      G   G G L  G
Sbjct: 121 KVTNLISGHGSFASLLGLGSGNGGLDYG 146

[Close]

BLAST of Spg034854.1 vs. ExPASy Swiss-Prot
Match: O82155 (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-25
Identity = 57/90 (63.33%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 25  PEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAK 84
           PEQE L CPRCDS NTKFCYYNNYN SQPRHFCK+CR YWT  G LR+IPVGGG+RK+ K
Sbjct: 28  PEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNK 87

Query: 85  RSRTCIPTAVVSSSSGSLTNS--VSRLDHH 113
           RS         SS S +L N     + DHH
Sbjct: 88  RSG--------SSPSSNLKNQTVAEKPDHH 109

[Close]

BLAST of Spg034854.1 vs. ExPASy Swiss-Prot
Match: Q94AR6 (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-25
Identity = 53/85 (62.35%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 26  EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKR 85
           EQE L CPRCDS NTKFCYYNNYN SQPRHFCKSCR YWT  G LR++PVGGGSRKNA +
Sbjct: 25  EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATK 84

Query: 86  SRTCIPTAVVSSSSGSLTNSVSRLD 111
             T   ++  S S+ S        D
Sbjct: 85  RSTSSSSSASSPSNSSQNKKTKNPD 109

[Close]

BLAST of Spg034854.1 vs. ExPASy TrEMBL
Match: A0A6J1HGU9 (dof zinc finger protein DOF3.4-like OS=Cucurbita moschata OX=3662 GN=LOC111463427 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.9e-68
Identity = 132/153 (86.27%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGLCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP------TAVVSSSSGSLTNSVSRLDHHLL 120
           R YWTH GTLRDIPVGGGSRKNAKRSRTCIP      T+VVSSSSGSLTNSVS+LDHH L
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAAATSVVSSSSGSLTNSVSQLDHHSL 120

Query: 121 PATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM 147
           PATP LVPLVGGH GG+QF  GGGGELKAGGNM
Sbjct: 121 PATPFLVPLVGGHSGGLQFGGGGGGELKAGGNM 153

[Close]

BLAST of Spg034854.1 vs. ExPASy TrEMBL
Match: A0A6J1KTT2 (dof zinc finger protein DOF3.4-like OS=Cucurbita maxima OX=3661 GN=LOC111497154 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.9e-68
Identity = 131/152 (86.18%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP-----TAVVSSSSGSLTNSVSRLDHHLLP 120
           R YWTH GTLRDIPVGGGSRKNAKRSRTCIP     T+VVSSSSGSLTNSVS+LDHH LP
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAATSVVSSSSGSLTNSVSQLDHHSLP 120

Query: 121 ATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM 147
           ATP LVPLVGGH GG+QF  GGGGELKAGGN+
Sbjct: 121 ATPFLVPLVGGHSGGLQFGGGGGGELKAGGNV 152

[Close]

BLAST of Spg034854.1 vs. ExPASy TrEMBL
Match: A0A0A0KG50 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490030 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 116/140 (82.86%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSG-GAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPS+AGDHRK  TKPL SG G  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTA---VVSSSSGSLTNSVSRLDHHLLPA 120
           CR YWTH GTLRDIPVGGGSRKNAKRSRTCIPT+   V SSSSGS +NSVSRLDHH LPA
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPTSAAIVSSSSSGSFSNSVSRLDHHPLPA 120

Query: 121 TPVLVPLVGGHGGGVQFCGG 137
           TPVLVPL GG GG ++  GG
Sbjct: 121 TPVLVPLGGGVGGDLKVGGG 140

[Close]

BLAST of Spg034854.1 vs. ExPASy TrEMBL
Match: A0A5D3CLU5 (Dof zinc finger protein DOF3.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005120 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.3e-57
Identity = 118/149 (79.19%), Postives = 122/149 (81.88%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSG-GAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPS+AGDHRK  TKPL SG G  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVV----SSSSGSLTNSVSRLDHHLLP 120
           CR YWTH GTLRDIPVGGGSRKNAKRSRTCIP +      SSSSGS +NSVSR+DHH LP
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPASAAIVSSSSSSGSFSNSVSRMDHHPLP 120

Query: 121 ATPVLVPLVGGHGGGVQFCGGGGELKAGG 145
           ATPVLVPL    GGGV     GGELK GG
Sbjct: 121 ATPVLVPL----GGGV-----GGELKVGG 140

[Close]

BLAST of Spg034854.1 vs. ExPASy TrEMBL
Match: A0A1S3B0L0 (dof zinc finger protein DOF3.4 OS=Cucumis melo OX=3656 GN=LOC103484745 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.3e-57
Identity = 113/140 (80.71%), Postives = 119/140 (85.00%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSG-GAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPS+AGDHRK  TKPL SG G  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTA---VVSSSSGSLTNSVSRLDHHLLPA 120
           CR YWTH GTLRDIPVGGGSRKNAKRSRTCIP +   V SSSSGS +NS SR+DHH LPA
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPASAAIVSSSSSGSFSNSASRMDHHPLPA 120

Query: 121 TPVLVPLVGGHGGGVQFCGG 137
           TPVLVPL GG GG ++  GG
Sbjct: 121 TPVLVPLGGGVGGDLKVGGG 140

[Close]

BLAST of Spg034854.1 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 148.3 bits (373), Expect = 4.9e-36
Identity = 75/121 (61.98%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 3   SNAGDHRKTATKPLGSGGAYP-PPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR 62
           S++G+ R+ A KP  +G   P   +QE LPCPRCDS+NTKFCYYNNYNFSQPRHFCK+CR
Sbjct: 4   SDSGEPRRIAMKP--NGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACR 63

Query: 63  CYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATPVLV 122
            YWTH GTLRD+PVGGG+RK+AKRSRTC      +SSS S++  VS  +   L  TPVL 
Sbjct: 64  RYWTHGGTLRDVPVGGGTRKSAKRSRTC-----SNSSSSSVSGVVSNSNGVPLQTTPVLF 117

[Close]

BLAST of Spg034854.1 vs. TAIR 10
Match: AT5G66940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-35
Identity = 77/131 (58.78%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGG--AYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCK 60
           MPS   + R+    P G GG  A P  +QE L CPRC+STNTKFCYYNNYNFSQPRHFCK
Sbjct: 1   MPSEFSESRRVPKIPHGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCK 60

Query: 61  SCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATP 120
           SCR YWTH GTLRDIPVGG SRK++KRSRT          S + T SV    +  L ATP
Sbjct: 61  SCRRYWTHGGTLRDIPVGGVSRKSSKRSRT---------YSSAATTSVVGSRNFPLQATP 120

Query: 121 VLVPLVGGHGG 130
           VL P    +GG
Sbjct: 121 VLFPQSSSNGG 122

[Close]

BLAST of Spg034854.1 vs. TAIR 10
Match: AT1G47655.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.0e-30
Identity = 72/148 (48.65%), Postives = 90/148 (60.81%), Query Frame = 0


Query: 1   MPSNAGDHRKTATKPLGSGGAYPPPE-QEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPS     R T  +P  S  AYPPP   E LPCPRC+ST TKFCYYNNYN +QPR++CKS
Sbjct: 1   MPSEPNQTRPTRVQP--STAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKS 60

Query: 61  CRCYWTHSGTLRDIPVGGGSRK-NAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATP 120
           CR YWT  GTLRD+PVGGG+R+ ++KR R+   TA  SSSS S+  + ++       +  
Sbjct: 61  CRRYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQT 120

Query: 121 VLVPLVGGHGGGVQFCG---GGGELKAG 144
            +  L+ GHG      G   G G L  G
Sbjct: 121 KVTNLISGHGSFASLLGLGSGNGGLDYG 146

[Close]

BLAST of Spg034854.1 vs. TAIR 10
Match: AT1G51700.1 (DOF zinc finger protein 1 )

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 57/90 (63.33%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 25  PEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAK 84
           PEQE L CPRCDS NTKFCYYNNYN SQPRHFCK+CR YWT  G LR+IPVGGG+RK+ K
Sbjct: 28  PEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNK 87

Query: 85  RSRTCIPTAVVSSSSGSLTNS--VSRLDHH 113
           RS         SS S +L N     + DHH
Sbjct: 88  RSG--------SSPSSNLKNQTVAEKPDHH 109

[Close]

BLAST of Spg034854.1 vs. TAIR 10
Match: AT3G21270.1 (DOF zinc finger protein 2 )

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 53/85 (62.35%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 26  EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKR 85
           EQE L CPRCDS NTKFCYYNNYN SQPRHFCKSCR YWT  G LR++PVGGGSRKNA +
Sbjct: 25  EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATK 84

Query: 86  SRTCIPTAVVSSSSGSLTNSVSRLD 111
             T   ++  S S+ S        D
Sbjct: 85  RSTSSSSSASSPSNSSQNKKTKNPD 109

The following BLAST results are available for this feature:

BLAST of Spg034854.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963128.1	5.9e-68	86.27	dof zinc finger protein DOF3.4-like [Cucurbita moschata]	[more]
KAG6595058.1	7.7e-68	85.71	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG702...	[more]
XP_023003604.1	1.0e-67	86.18	dof zinc finger protein DOF3.4-like [Cucurbita maxima]	[more]
XP_023518495.1	3.8e-67	85.06	dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038883004.1	2.7e-60	84.89	dof zinc finger protein DOF3.4-like [Benincasa hispida]	[more]

BLAST of Spg034854.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39088	6.8e-35	61.98	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q9FGD6	4.4e-34	58.78	Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV...	[more]
Q9SX97	5.6e-29	48.65	Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV...	[more]
O82155	1.7e-25	63.33	Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV...	[more]
Q94AR6	1.7e-25	62.35	Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV...	[more]

BLAST of Spg034854.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGU9	2.9e-68	86.27	dof zinc finger protein DOF3.4-like OS=Cucurbita moschata OX=3662 GN=LOC11146342...	[more]
A0A6J1KTT2	4.9e-68	86.18	dof zinc finger protein DOF3.4-like OS=Cucurbita maxima OX=3661 GN=LOC111497154 ...	[more]
A0A0A0KG50	1.2e-58	82.86	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490030 PE...	[more]
A0A5D3CLU5	2.3e-57	79.19	Dof zinc finger protein DOF3.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B0L0	2.3e-57	80.71	dof zinc finger protein DOF3.4 OS=Cucumis melo OX=3656 GN=LOC103484745 PE=4 SV=1	[more]

BLAST of Spg034854.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50410.1	4.9e-36	61.98	OBF binding protein 1	[more]
AT5G66940.1	3.1e-35	58.78	Dof-type zinc finger DNA-binding family protein	[more]
AT1G47655.1	4.0e-30	48.65	Dof-type zinc finger DNA-binding family protein	[more]
AT1G51700.1	1.2e-26	63.33	DOF zinc finger protein 1	[more]
AT3G21270.1	1.2e-26	62.35	DOF zinc finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 28..84 e-value: 1.8E-31 score: 108.1
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 30..84 score: 27.679823
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR31992:SF12	DOF ZINC FINGER PROTEIN DOF3.4	coord: 1..135
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 1..135

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg034854	Spg034854	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg034854.1-three_prime_utr	Spg034854.1-three_prime_utr-scaffold3:25883657..25883680	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg034854.1-cds	Spg034854.1-cds-scaffold3:25883681..25883682	CDS
Spg034854.1-cds	Spg034854.1-cds-scaffold3:25883836..25884274	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg034854.1	Spg034854.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding