Spg033545.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAGTTTGAAGAAACTGGCGAAGACGAATGAGGAGCAACGATCGGAGAAATCTCGACTAGCGTCGGAGGCGGAGGCGGGCGGTGGTCGGAGCACGACGCCGAGAGGGTGTGTGGTTGTGTATGTGGGAGACGAATGCCGGAGATTTGTGGTACCAACAAAGTTTCTTTGTCACCCACTTTTCAAGATGGTGTTGGATAAAGCCTACAAGGAATTTGGATTTGATCAGAAAAGTGGTCTTGTGGTTCCTTGTAGTGTTTTTGCTTTTCAAGAGATTTTGAACACTATTGAAGCTAATCATGGTAGCTTCCACTTTGGAGAACTTGTTCATGAGTTCGTTTGA ATGTCAAGTTTGAAGAAACTGGCGAAGACGAATGAGGAGCAACGATCGGAGAAATCTCGACTAGCGTCGGAGGCGGAGGCGGGCGGTGGTCGGAGCACGACGCCGAGAGGGTGTGTGGTTGTGTATGTGGGAGACGAATGCCGGAGATTTGTGGTACCAACAAAGTTTCTTTGTCACCCACTTTTCAAGATGGTGTTGGATAAAGCCTACAAGGAATTTGGATTTGATCAGAAAAGTGGTCTTGTGGTTCCTTGTAGTGTTTTTGCTTTTCAAGAGATTTTGAACACTATTGAAGCTAATCATGGTAGCTTCCACTTTGGAGAACTTGTTCATGAGTTCGTTTGA ATGTCAAGTTTGAAGAAACTGGCGAAGACGAATGAGGAGCAACGATCGGAGAAATCTCGACTAGCGTCGGAGGCGGAGGCGGGCGGTGGTCGGAGCACGACGCCGAGAGGGTGTGTGGTTGTGTATGTGGGAGACGAATGCCGGAGATTTGTGGTACCAACAAAGTTTCTTTGTCACCCACTTTTCAAGATGGTGTTGGATAAAGCCTACAAGGAATTTGGATTTGATCAGAAAAGTGGTCTTGTGGTTCCTTGTAGTGTTTTTGCTTTTCAAGAGATTTTGAACACTATTGAAGCTAATCATGGTAGCTTCCACTTTGGAGAACTTGTTCATGAGTTCGTTTGA MSSLKKLAKTNEEQRSEKSRLASEAEAGGGRSTTPRGCVVVYVGDECRRFVVPTKFLCHPLFKMVLDKAYKEFGFDQKSGLVVPCSVFAFQEILNTIEANHGSFHFGELVHEFV Homology
BLAST of Spg033545.1 vs. NCBI nr
Match: KAA0043872.1 (auxin-responsive protein SAUR15-like [Cucumis melo var. makuwa]) HSP 1 Score: 191.0 bits (484), Expect = 5.5e-45 Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of Spg033545.1 vs. NCBI nr
Match: KAG6596577.1 (Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 177.9 bits (450), Expect = 4.8e-41 Identity = 89/112 (79.46%), Postives = 97/112 (86.61%), Query Frame = 0
BLAST of Spg033545.1 vs. NCBI nr
Match: KCW48946.1 (hypothetical protein EUGRSUZ_K02555 [Eucalyptus grandis]) HSP 1 Score: 126.3 bits (316), Expect = 1.7e-25 Identity = 66/124 (53.23%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of Spg033545.1 vs. NCBI nr
Match: XP_010037266.2 (auxin-responsive protein SAUR50 [Eucalyptus grandis]) HSP 1 Score: 126.3 bits (316), Expect = 1.7e-25 Identity = 68/124 (54.84%), Postives = 84/124 (67.74%), Query Frame = 0
BLAST of Spg033545.1 vs. NCBI nr
Match: KCW48295.1 (hypothetical protein EUGRSUZ_K02026 [Eucalyptus grandis]) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25 Identity = 68/124 (54.84%), Postives = 83/124 (66.94%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 9.2e-11 Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.9e-10 Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-09 Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.3e-09 Identity = 26/68 (38.24%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.9e-09 Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy TrEMBL
Match: A0A5A7TKN6 (Auxin-responsive protein SAUR15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002080 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.7e-45 Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy TrEMBL
Match: A0A0A0LAX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777530 PE=3 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 7.7e-45 Identity = 94/113 (83.19%), Postives = 101/113 (89.38%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy TrEMBL
Match: A0A059A5M7 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K02555 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 8.0e-26 Identity = 66/124 (53.23%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy TrEMBL
Match: A0A059A4M5 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K02026 PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.0e-25 Identity = 68/124 (54.84%), Postives = 83/124 (66.94%), Query Frame = 0
BLAST of Spg033545.1 vs. ExPASy TrEMBL
Match: A0A438JSC1 (Auxin-responsive protein SAUR50 OS=Vitis vinifera OX=29760 GN=SAUR50_6 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25 Identity = 65/120 (54.17%), Postives = 79/120 (65.83%), Query Frame = 0
BLAST of Spg033545.1 vs. TAIR 10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19 Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Spg033545.1 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 82.4 bits (202), Expect = 2.6e-16 Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 0
BLAST of Spg033545.1 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 82.4 bits (202), Expect = 2.6e-16 Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 0
BLAST of Spg033545.1 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of Spg033545.1 vs. TAIR 10
Match: AT3G12830.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 67.8 bits (164), Expect = 6.5e-12 Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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